BLASTX nr result

ID: Catharanthus23_contig00009562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00009562
         (289 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361489.1| PREDICTED: rho GTPase-activating protein gac...    70   4e-10
ref|XP_006345870.1| PREDICTED: uncharacterized protein At2g27730...    58   1e-06
ref|XP_002269381.1| PREDICTED: uncharacterized protein At2g27730...    57   2e-06

>ref|XP_006361489.1| PREDICTED: rho GTPase-activating protein gacHH-like [Solanum
           tuberosum]
          Length = 86

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 39/51 (76%), Positives = 41/51 (80%)
 Frame = -2

Query: 225 MSMRSVVSGSGLGRLMETNRRLSSTSGLRYFSDDKGRILSEEERAKENVYI 73
           M+MRSVVS SG+ RLME   R SS SGLRYFSD KGRI SEEERAKE VYI
Sbjct: 1   MAMRSVVSSSGVRRLMEGGGR-SSISGLRYFSDSKGRIFSEEERAKEAVYI 50


>ref|XP_006345870.1| PREDICTED: uncharacterized protein At2g27730, mitochondrial-like
           [Solanum tuberosum]
          Length = 87

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/53 (69%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
 Frame = -2

Query: 225 MSMRSVVSGSGLGRLME-TNRRL-SSTSGLRYFSDDKGRILSEEERAKENVYI 73
           M+MRSVVS SGL RL E  N  L SS SGLRYFSD  G+IL EEERA+EN+YI
Sbjct: 1   MAMRSVVSFSGLRRLTEGANVALRSSVSGLRYFSD--GKILGEEERAQENIYI 51


>ref|XP_002269381.1| PREDICTED: uncharacterized protein At2g27730, mitochondrial [Vitis
           vinifera] gi|147838584|emb|CAN74313.1| hypothetical
           protein VITISV_013806 [Vitis vinifera]
          Length = 85

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/51 (64%), Positives = 35/51 (68%)
 Frame = -2

Query: 225 MSMRSVVSGSGLGRLMETNRRLSSTSGLRYFSDDKGRILSEEERAKENVYI 73
           M+MR  VS   L R ME  RR    S  RYFSDDKGR+LSEEERA ENVYI
Sbjct: 1   MAMRYTVSQIRLNRFMEGYRR----SAPRYFSDDKGRVLSEEERAAENVYI 47


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