BLASTX nr result
ID: Catharanthus23_contig00008912
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00008912
(2893 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] 1364 0.0
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica] 952 0.0
ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 946 0.0
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata] 946 0.0
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v... 938 0.0
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g... 936 0.0
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata] 934 0.0
dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis] 930 0.0
dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana] 929 0.0
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata] 926 0.0
dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila] 925 0.0
dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa] 924 0.0
dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea] 912 0.0
emb|CAB46363.1| DNA topoisomerase I [Daucus carota] 912 0.0
dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35] 908 0.0
dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana] 896 0.0
ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis... 895 0.0
ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinife... 889 0.0
ref|XP_006279978.1| hypothetical protein CARUB_v10025848mg [Caps... 888 0.0
ref|XP_006401468.1| hypothetical protein EUTSA_v10012622mg [Eutr... 884 0.0
>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
Length = 910
Score = 1364 bits (3531), Expect = 0.0
Identities = 691/782 (88%), Positives = 696/782 (89%)
Frame = -1
Query: 2737 GSVKLKPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTNQV 2558
GS K+KPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTNQV
Sbjct: 129 GSFKVKPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTNQV 188
Query: 2557 SKEGSKPENEDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDKPLAKKLQHNGSAMRDGQP 2378
SKEGSKPENEDSDDEKPLSSRFPLKSGVGESTS AYDSDDDKPLAKKLQHNGSAMRDGQP
Sbjct: 189 SKEGSKPENEDSDDEKPLSSRFPLKSGVGESTSKAYDSDDDKPLAKKLQHNGSAMRDGQP 248
Query: 2377 NKYSNMSNKRPPGEIKSSNQLSVKKPKLSSVTPPTNKKQASVKPEPKAEXXXXDHLPISQ 2198
NKYSNMSNKRPPG+IKSSNQLSVKKPKLSSVT PTNKKQASVKPEPKAE DHLPISQ
Sbjct: 249 NKYSNMSNKRPPGDIKSSNQLSVKKPKLSSVTAPTNKKQASVKPEPKAEDDDDDHLPISQ 308
Query: 2197 RIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKWNK 2018
RI KWNK
Sbjct: 309 RIKKSPTSESKSSSIKKTTKVVSSSVKKVNKKSKKVMKNSKYSKSSKVPPSSGEGKKWNK 368
Query: 2017 LEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENFFGD 1838
LEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENFFGD
Sbjct: 369 LEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENFFGD 428
Query: 1837 WKKILGKNHVIQNLEDCDFTPIYEWHQSXXXXXXXXXXXXXXXXXXXXXXXXXKYMWAWV 1658
WKKILGKNHVIQNLE+CDF+PIYEWHQS KYMWAWV
Sbjct: 429 WKKILGKNHVIQNLENCDFSPIYEWHQSEKEKKKQMTTEEKKALKEEKLKQEEKYMWAWV 488
Query: 1657 DGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGERWK 1478
DGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGERWK
Sbjct: 489 DGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGERWK 548
Query: 1477 EVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIRAAY 1298
EVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIRAAY
Sbjct: 549 EVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIRAAY 608
Query: 1297 TKNFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKF 1118
TK+FASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKF
Sbjct: 609 TKDFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKF 668
Query: 1117 DFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPGLTAK 938
DFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPGLTAK
Sbjct: 669 DFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPGLTAK 728
Query: 937 VFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQMLRLN 758
VFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQMLRLN
Sbjct: 729 VFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQMLRLN 788
Query: 757 EKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKIEKME 578
EKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKIEKME
Sbjct: 789 EKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKIEKME 848
Query: 577 RDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVDPSF 398
RDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVDPSF
Sbjct: 849 RDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVDPSF 908
Query: 397 RF 392
RF
Sbjct: 909 RF 910
>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
Length = 927
Score = 952 bits (2460), Expect = 0.0
Identities = 472/546 (86%), Positives = 490/546 (89%), Gaps = 1/546 (0%)
Frame = -1
Query: 2026 WNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENF 1847
W L HNGVIFPPPY PHG+KMLYK +P+ LTPEQEEVATMFAVMLDTDYMNKPRFKENF
Sbjct: 384 WTTLVHNGVIFPPPYNPHGVKMLYKRQPITLTPEQEEVATMFAVMLDTDYMNKPRFKENF 443
Query: 1846 FGDWKKILGKNHVIQNLEDCDFTPIYEWHQSXXXXXXXXXXXXXXXXXXXXXXXXXKYMW 1667
F DWKK+LGKNH IQNLEDCDF PIYEWHQ KYMW
Sbjct: 444 FSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTEEKKALKEDKLQQEEKYMW 503
Query: 1666 AWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGE 1487
A VDG KEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP DITINIGKDAPIPECP+PGE
Sbjct: 504 AIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGE 563
Query: 1486 RWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIR 1307
RWKEVR+DNTVTWLAFW DPIN KEFKYVFLAASSTLKG SDKEKYEKARLLKDYI GIR
Sbjct: 564 RWKEVRNDNTVTWLAFWIDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIR 623
Query: 1306 AAYTKNFAS-KDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 1130
AAYTK+F + KDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN
Sbjct: 624 AAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 683
Query: 1129 ILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPG 950
ILKFDFLGKDSIRYQNEV+VE AVFKAIQQFRSGKEGS DLFD LDTSKLNAHLKELMPG
Sbjct: 684 ILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPG 743
Query: 949 LTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQM 770
LTAKVFRTYNASITLDDMLS+ETKGG+VAEKVVVYQHANKEVAIICNHQRTVSKSHSAQM
Sbjct: 744 LTAKVFRTYNASITLDDMLSKETKGGEVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQM 803
Query: 769 LRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKI 590
RLNEKI+ELK +EELK+DLSRVKKGKPP SK ADGKPKRNLNPE+LE+K+AQ NAKI
Sbjct: 804 SRLNEKIDELKTAMEELKTDLSRVKKGKPP--SKGADGKPKRNLNPEALERKMAQINAKI 861
Query: 589 EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDV 410
EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF W+MDV
Sbjct: 862 EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWSMDV 921
Query: 409 DPSFRF 392
DPSFRF
Sbjct: 922 DPSFRF 927
Score = 169 bits (429), Expect = 5e-39
Identities = 101/187 (54%), Positives = 122/187 (65%), Gaps = 11/187 (5%)
Frame = -1
Query: 2722 KPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTNQVSKEGS 2543
K N HKS+ E K P A+ ++SE SDD KPLS R SSKG +N +KEG
Sbjct: 119 KQQNHHKSSAAFIEPK--PSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGG 176
Query: 2542 KP---------ENEDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDKPLAKKLQHNGSAMR 2390
E+EDS+DEKPLS RF KS +GESTS +YDSD+ KPLA K+Q NGS R
Sbjct: 177 DSCSIRRRVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSVSR 236
Query: 2389 DGQPNKYSNMSNKRPPGEIKSSNQLSVKKPKLSSVTPPTNKKQASVK--PEPKAEXXXXD 2216
DG NK +++SNKRPPGE+KS NQ SVKKPKLSS + KQA+VK PEPKAE D
Sbjct: 237 DGPMNKSASLSNKRPPGEVKSLNQSSVKKPKLSSPITSISNKQAAVKPEPEPKAE-DDDD 295
Query: 2215 HLPISQR 2195
++P+SQR
Sbjct: 296 NIPLSQR 302
>ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Solanum
tuberosum]
Length = 905
Score = 946 bits (2446), Expect = 0.0
Identities = 494/783 (63%), Positives = 562/783 (71%), Gaps = 9/783 (1%)
Frame = -1
Query: 2713 NQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSASSSKGN---------TNQ 2561
N ++ + + +E + S +++EDS+D KPLS R + SK N T+
Sbjct: 137 NVNQQSNIAPKESKQAIEPKSEPNDEAEDSEDDKPLSARVPSGLSKSNSIHANNVLGTST 196
Query: 2560 VSKEGSKPENEDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDKPLAKKLQHNGSAMRDGQ 2381
++ P+ EDSDDE PL+SRF +KS G STS S++ KP K++ NG
Sbjct: 197 SVQKSRPPKKEDSDDEIPLASRFQMKSSAGASTSKFSSSEEVKP---KIRQNGLPS---- 249
Query: 2380 PNKYSNMSNKRPPGEIKSSNQLSVKKPKLSSVTPPTNKKQASVKPEPKAEXXXXDHLPIS 2201
+ + +KRPPGE+ +L +K SVK E K E +P+S
Sbjct: 250 ----ATVLSKRPPGEVSLLLRLQLKSLDFLMHLHLFLVSNXSVKTEKKTEDDDD-EVPLS 304
Query: 2200 QRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKWN 2021
QRI KW
Sbjct: 305 QRIKKAVASASASASKVSSVKKATKVVSSSMKKTKKKLKKPKYSKSSKLQPSSGDGQKWT 364
Query: 2020 KLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENFFG 1841
LEHNGVIFPPPYKPHG+KMLYKGKPVDLTPEQEEVATM+AVMLDT+Y+ K +FKENF
Sbjct: 365 TLEHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVMLDTEYLTKQQFKENFMN 424
Query: 1840 DWKKILGKNHVIQNLEDCDFTPIYEWHQSXXXXXXXXXXXXXXXXXXXXXXXXXKYMWAW 1661
DW+KILGKNHVIQ LE+C+FTPIYEWHQS KYMWA
Sbjct: 425 DWRKILGKNHVIQKLEECNFTPIYEWHQSEKEKKKQMSSEEKKALREEKLKQEEKYMWAI 484
Query: 1660 VDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGERW 1481
VDG KEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DITINIGK P+PECP+PG+RW
Sbjct: 485 VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPNDITINIGKGVPVPECPIPGQRW 544
Query: 1480 KEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIRAA 1301
KEVRHDNTVTWLAFWNDPINP+EFKYVFLAASS+LKG SDKEKYEKAR LKDYI+GIR+A
Sbjct: 545 KEVRHDNTVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSA 604
Query: 1300 YTKNFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 1121
YTK+F SKDP K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK
Sbjct: 605 YTKDFTSKDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 664
Query: 1120 FDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPGLTA 941
FDFLGKDSIRYQNEV V VFKAIQQFRSGK+G DLFD LDTSKLNAHLKELMPGLTA
Sbjct: 665 FDFLGKDSIRYQNEVAVYEPVFKAIQQFRSGKKGGDDLFDKLDTSKLNAHLKELMPGLTA 724
Query: 940 KVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQMLRL 761
KVFRTYNAS TL+ L++ T+GG++A+KV VY ANKEVAIICNHQRTVSKSHS Q+ RL
Sbjct: 725 KVFRTYNASFTLEQQLTKLTQGGELADKVAVYNVANKEVAIICNHQRTVSKSHSVQISRL 784
Query: 760 NEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKIEKM 581
NEKI+ELKA++EE K DL+R KKGKPP+ K ADGK KRNL PE+L+KKI QTN KI+ +
Sbjct: 785 NEKIDELKAILEEFKVDLARAKKGKPPV--KGADGKAKRNLTPEALQKKIDQTNVKIDNI 842
Query: 580 ERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVDPS 401
ER ETKE+LKTVALGTSKINYLDPRITVAWCKRHEVPIEK+FNKSLLAKF WAMDV+PS
Sbjct: 843 ERQIETKEELKTVALGTSKINYLDPRITVAWCKRHEVPIEKMFNKSLLAKFAWAMDVEPS 902
Query: 400 FRF 392
F F
Sbjct: 903 FTF 905
>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
Length = 925
Score = 946 bits (2445), Expect = 0.0
Identities = 469/546 (85%), Positives = 488/546 (89%), Gaps = 1/546 (0%)
Frame = -1
Query: 2026 WNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENF 1847
W L HNGVIFPPPYKPHG+KMLYK +P+ LTPEQEEVATMFAVMLDTDYMNKP FKENF
Sbjct: 382 WTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMFAVMLDTDYMNKPCFKENF 441
Query: 1846 FGDWKKILGKNHVIQNLEDCDFTPIYEWHQSXXXXXXXXXXXXXXXXXXXXXXXXXKYMW 1667
F DWKKILGKNH+IQNLEDCDF PIYEWHQ KYMW
Sbjct: 442 FSDWKKILGKNHMIQNLEDCDFGPIYEWHQQEKEKKKQMTTEEKKALKEEKLQQEEKYMW 501
Query: 1666 AWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGE 1487
A VDG KEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP DITINIGKDAPIPECP+PGE
Sbjct: 502 AIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGE 561
Query: 1486 RWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIR 1307
RWKEVR+ NTVTWLA+WNDPIN KEFKYVFLAASSTLKG SDKEKYEKARLLKDYI GIR
Sbjct: 562 RWKEVRNGNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIR 621
Query: 1306 AAYTKNFAS-KDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 1130
AAYTK+F + KDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN
Sbjct: 622 AAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 681
Query: 1129 ILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPG 950
ILKFDFLGKDSIRYQNEV+VE AVFKAIQQFRSGKEGS DLFD LDTSKLNAHLKELMPG
Sbjct: 682 ILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPG 741
Query: 949 LTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQM 770
LTAKVFRTYNASITLDDMLS+ETKGG+VAE VVVYQHANKEVAIICNHQRTVSKSHSAQM
Sbjct: 742 LTAKVFRTYNASITLDDMLSKETKGGEVAENVVVYQHANKEVAIICNHQRTVSKSHSAQM 801
Query: 769 LRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKI 590
RLNEKI+ELK +EELK+DLSR KKGKPP +K ADGK KRNLNPE+LE+KI QTNAKI
Sbjct: 802 SRLNEKIDELKTALEELKTDLSRAKKGKPP--TKGADGKAKRNLNPEALERKITQTNAKI 859
Query: 589 EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDV 410
EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF W+MDV
Sbjct: 860 EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWSMDV 919
Query: 409 DPSFRF 392
DPSFRF
Sbjct: 920 DPSFRF 925
Score = 174 bits (442), Expect = 2e-40
Identities = 102/185 (55%), Positives = 122/185 (65%), Gaps = 9/185 (4%)
Frame = -1
Query: 2722 KPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTNQVSKEGS 2543
K N HKS+ E K P A+ ++SE SDD KPLS R SSKG +N +KEG
Sbjct: 119 KQQNHHKSSAAFIEPK--PSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGG 176
Query: 2542 KP---------ENEDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDKPLAKKLQHNGSAMR 2390
E+EDS+DEKPLS RF KS +GESTS +YDSD+ KPLA K+Q NGSA R
Sbjct: 177 DSCSIRRPVIEESEDSEDEKPLSCRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASR 236
Query: 2389 DGQPNKYSNMSNKRPPGEIKSSNQLSVKKPKLSSVTPPTNKKQASVKPEPKAEXXXXDHL 2210
DG NK +++SNKRPPGE KS NQ SVKKPKLSS + KQA+VKPEPKAE D++
Sbjct: 237 DGPMNKSASLSNKRPPGEAKSLNQSSVKKPKLSSPITSISNKQAAVKPEPKAE-DDDDNI 295
Query: 2209 PISQR 2195
P+SQR
Sbjct: 296 PLSQR 300
>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
Length = 883
Score = 938 bits (2425), Expect = 0.0
Identities = 490/785 (62%), Positives = 555/785 (70%), Gaps = 24/785 (3%)
Frame = -1
Query: 2674 SSPLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTN-------------------QVSK 2552
S P + S+DS+D PL L+ S KG ++ Q +K
Sbjct: 101 SHPPETKVGVKESSDDSEDEIPLLLKLQLKSRKGASSSKLLDSKGLSSPASSRPQSQKAK 160
Query: 2551 EGSKPENEDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDKPLAKKLQHNGSAMRDGQPNK 2372
+K ++DS+DE PLSS+F LK+G+G S + D+ KPL L+ NG + +D + K
Sbjct: 161 VNNKNLSDDSEDEIPLSSKFRLKTGMGASLDKLDNFDEKKPLTSTLKPNGISKKDDERVK 220
Query: 2371 YSNMSNKRPPGEIKSSNQLSVKKPKLSSVTPPTNKKQASVKPEPKAEXXXXD-----HLP 2207
NKRP G+ +S+ S KKPKL + KQ SVK E K + + + P
Sbjct: 221 SPKGQNKRPLGQANTSHHSSSKKPKLLDGSVKGKVKQVSVKAEQKDDDDDDNDDDDEYTP 280
Query: 2206 ISQRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 2027
+R+ K
Sbjct: 281 TVKRLKKSVSSDNKKASKTKVIPSSRKKATKKAKKSKKLAKSSKYSKSTKVPPNSGEGQK 340
Query: 2026 WNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENF 1847
W LEHNGVIFPPPYKPHG+KMLY G+PVDLTPEQEEVATMFAVM DTDY KPRF ENF
Sbjct: 341 WTTLEHNGVIFPPPYKPHGVKMLYNGRPVDLTPEQEEVATMFAVMKDTDYATKPRFIENF 400
Query: 1846 FGDWKKILGKNHVIQNLEDCDFTPIYEWHQSXXXXXXXXXXXXXXXXXXXXXXXXXKYMW 1667
DW+ LGKNHVI+ E CDFTPIYEWH+ KYMW
Sbjct: 401 MNDWRVRLGKNHVIKKFELCDFTPIYEWHEKEKEKKKQMTTEEKKALKEEKLKQEDKYMW 460
Query: 1666 AWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGE 1487
A VDG KEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI P DITINIGK+AP+PECP+PGE
Sbjct: 461 AVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRICPSDITINIGKEAPVPECPIPGE 520
Query: 1486 RWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIR 1307
RWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASS+LKG SDKEKYEKARLLKDYIQ IR
Sbjct: 521 RWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQNIR 580
Query: 1306 AAYTKNFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNI 1127
A YTK+F +KD K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV VPPN
Sbjct: 581 ATYTKDFTNKDTMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNK 640
Query: 1126 LKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPGL 947
L+FDFLGKDSIRY N VEVE V+KAI QF++GK G DLFD LDTSKLNAHLKELMPGL
Sbjct: 641 LEFDFLGKDSIRYFNTVEVELPVYKAIGQFKTGKSGGDDLFDKLDTSKLNAHLKELMPGL 700
Query: 946 TAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQML 767
TAKVFRTYNASITLD+ML+RE +GGD EK+V+YQHANKEVAIICNHQR+VSKSH QM
Sbjct: 701 TAKVFRTYNASITLDEMLNREARGGDAMEKIVIYQHANKEVAIICNHQRSVSKSHDVQMS 760
Query: 766 RLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKIE 587
RL+EK+ EL+ V++ELK+DL+R KKGKPPL K++DGKPK+N+ PE LE+KIAQTN KIE
Sbjct: 761 RLSEKMRELQGVLDELKTDLARAKKGKPPL--KDSDGKPKKNMTPEVLERKIAQTNTKIE 818
Query: 586 KMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVD 407
KMERD +TKEDLKTVALGTSKINYLDPRI+VAWCKR EVPIEKIFNKSLLAKF WAMDVD
Sbjct: 819 KMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKIFNKSLLAKFAWAMDVD 878
Query: 406 PSFRF 392
PSFRF
Sbjct: 879 PSFRF 883
>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
Length = 920
Score = 936 bits (2418), Expect = 0.0
Identities = 464/539 (86%), Positives = 483/539 (89%), Gaps = 1/539 (0%)
Frame = -1
Query: 2026 WNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENF 1847
W L HNGVIFPPPYKPHG+KMLYK +P+ LTPEQEEVATMFAVMLDTDYMNKPRFKENF
Sbjct: 383 WTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMFAVMLDTDYMNKPRFKENF 442
Query: 1846 FGDWKKILGKNHVIQNLEDCDFTPIYEWHQSXXXXXXXXXXXXXXXXXXXXXXXXXKYMW 1667
F DWKK+LGKNH IQNLEDCDF PIYEWHQ KYMW
Sbjct: 443 FSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTEEKKALKEEKLQQEEKYMW 502
Query: 1666 AWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGE 1487
A VDG KEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP DITINIGKDAPIPECP+PGE
Sbjct: 503 AIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGE 562
Query: 1486 RWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIR 1307
RWKEVR+DNTVTWLA+WNDPIN KEFKYVFLAASSTLKG SDKEKYEKARLLKDYI GIR
Sbjct: 563 RWKEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIR 622
Query: 1306 AAYTKNFAS-KDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 1130
AAYTK+F + KDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN
Sbjct: 623 AAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 682
Query: 1129 ILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPG 950
ILKFDFLGKDSIRYQNEV+VE AVFKAIQQFRSGKEGS DLFD LDTSKLNAHLKELMPG
Sbjct: 683 ILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPG 742
Query: 949 LTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQM 770
LTAKVFRTYNASITLDDMLS++T GG+VAEKVVVYQHANKEVAIICNHQRTVSKSHSAQM
Sbjct: 743 LTAKVFRTYNASITLDDMLSKKTNGGEVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQM 802
Query: 769 LRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKI 590
RLNEKI+ELK +EELK+DLSR KKGKP SK ADGKPKRNLNPE+LE+KIAQTNAKI
Sbjct: 803 SRLNEKIDELKTALEELKTDLSRAKKGKP--LSKGADGKPKRNLNPEALERKIAQTNAKI 860
Query: 589 EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMD 413
EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF WAM+
Sbjct: 861 EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMN 919
Score = 172 bits (435), Expect = 1e-39
Identities = 100/185 (54%), Positives = 122/185 (65%), Gaps = 9/185 (4%)
Frame = -1
Query: 2722 KPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTNQVSKEGS 2543
K N HKS+ E K P A+ ++SE SDD KPLS R SSKG +N +KEG
Sbjct: 120 KQQNHHKSSAAFIEPK--PSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGG 177
Query: 2542 KP---------ENEDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDKPLAKKLQHNGSAMR 2390
E+EDS+DEKPLS RF KS +GESTS +YDSD+ KPLA K+Q NGSA R
Sbjct: 178 DSCSIRRPVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASR 237
Query: 2389 DGQPNKYSNMSNKRPPGEIKSSNQLSVKKPKLSSVTPPTNKKQASVKPEPKAEXXXXDHL 2210
D NK +++SNKRPPGE+KS NQ S+KKPKLSS + KQA+VKPEPKAE D++
Sbjct: 238 DSPMNKSASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAE-DDDDNI 296
Query: 2209 PISQR 2195
P+SQR
Sbjct: 297 PLSQR 301
>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
Length = 920
Score = 934 bits (2413), Expect = 0.0
Identities = 463/539 (85%), Positives = 482/539 (89%), Gaps = 1/539 (0%)
Frame = -1
Query: 2026 WNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENF 1847
W L HNGVIFPPPYKPHG+KMLYK +P+ LTPEQEEVATMFAVMLDTDYMNKPRFKENF
Sbjct: 383 WTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMFAVMLDTDYMNKPRFKENF 442
Query: 1846 FGDWKKILGKNHVIQNLEDCDFTPIYEWHQSXXXXXXXXXXXXXXXXXXXXXXXXXKYMW 1667
F DWKK+LGKNH IQNLEDCDF PIYEWHQ KYMW
Sbjct: 443 FSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTEEKKALKEEKLQQEEKYMW 502
Query: 1666 AWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGE 1487
A VDG KEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP DITINIGKDAPIPECP+PGE
Sbjct: 503 AIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGE 562
Query: 1486 RWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIR 1307
RWKEVR+DNTVTWLA+WNDPIN KEFKYVFLAASSTLKG SDKEKYEKARLLKDYI GIR
Sbjct: 563 RWKEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIR 622
Query: 1306 AAYTKNFAS-KDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 1130
AAYTK+F + KDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN
Sbjct: 623 AAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 682
Query: 1129 ILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPG 950
ILKFDFLGKDSIRYQNEV+VE AVFKAI QFRSGKEGS DLFD LDTSKLNAHLKELMPG
Sbjct: 683 ILKFDFLGKDSIRYQNEVQVEPAVFKAIHQFRSGKEGSEDLFDRLDTSKLNAHLKELMPG 742
Query: 949 LTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQM 770
LTAKVFRTYNASITLDDMLS++T GG+VAEKVVVYQHANKEVAIICNHQRTVSKSHSAQM
Sbjct: 743 LTAKVFRTYNASITLDDMLSKKTNGGEVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQM 802
Query: 769 LRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKI 590
RLNEKI+ELK +EELK+DLSR KKGKP SK ADGKPKRNLNPE+LE+KIAQTNAKI
Sbjct: 803 SRLNEKIDELKTALEELKTDLSRAKKGKP--LSKGADGKPKRNLNPEALERKIAQTNAKI 860
Query: 589 EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMD 413
EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF WAM+
Sbjct: 861 EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMN 919
Score = 172 bits (435), Expect = 1e-39
Identities = 100/185 (54%), Positives = 122/185 (65%), Gaps = 9/185 (4%)
Frame = -1
Query: 2722 KPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTNQVSKEGS 2543
K N HKS+ E K P A+ ++SE SDD KPLS R SSKG +N +KEG
Sbjct: 120 KQQNHHKSSAAFIEPK--PSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGG 177
Query: 2542 KP---------ENEDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDKPLAKKLQHNGSAMR 2390
E+EDS+DEKPLS RF KS +GESTS +YDSD+ KPLA K+Q NGSA R
Sbjct: 178 DSCSIRRPVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASR 237
Query: 2389 DGQPNKYSNMSNKRPPGEIKSSNQLSVKKPKLSSVTPPTNKKQASVKPEPKAEXXXXDHL 2210
D NK +++SNKRPPGE+KS NQ S+KKPKLSS + KQA+VKPEPKAE D++
Sbjct: 238 DSPMNKSASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAE-DDDDNI 296
Query: 2209 PISQR 2195
P+SQR
Sbjct: 297 PLSQR 301
>dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
Length = 926
Score = 930 bits (2404), Expect = 0.0
Identities = 461/546 (84%), Positives = 484/546 (88%), Gaps = 1/546 (0%)
Frame = -1
Query: 2026 WNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENF 1847
W L HNGV+F PPYKPHG+KMLYK +P+ LTPEQEEVATMFAVMLDTDYM KPRFKENF
Sbjct: 383 WTTLVHNGVMFLPPYKPHGVKMLYKXQPLTLTPEQEEVATMFAVMLDTDYMTKPRFKENF 442
Query: 1846 FGDWKKILGKNHVIQNLEDCDFTPIYEWHQSXXXXXXXXXXXXXXXXXXXXXXXXXKYMW 1667
F DWKK+LGKNH +QNLEDCDF PIYEWHQ KYMW
Sbjct: 443 FSDWKKMLGKNHTVQNLEDCDFGPIYEWHQQEKEKRKQMTTEEKKALKEERLQQEEKYMW 502
Query: 1666 AWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGE 1487
A VDG KEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP DITINIGKDAPIPECP+PGE
Sbjct: 503 AIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGE 562
Query: 1486 RWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIR 1307
RWKEVR+DNTVTWLAFWNDPIN KE KYVFLAASSTLKG SDKEKYEKARLLKDYI GIR
Sbjct: 563 RWKEVRNDNTVTWLAFWNDPINQKECKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIR 622
Query: 1306 AAYTKNFAS-KDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 1130
AAYTK+F + KDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN
Sbjct: 623 AAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 682
Query: 1129 ILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPG 950
ILK DF+GKDSIRYQNEV+VE AVFKAIQQFRSGKEG +DLFD LDTSKLNAHLKELMPG
Sbjct: 683 ILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGCADLFDRLDTSKLNAHLKELMPG 742
Query: 949 LTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQM 770
LTAKVFRTYNASITLDDMLS+ETKGG VAEKV VYQHANKEVAIICNHQRTVSKSHSAQM
Sbjct: 743 LTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQHANKEVAIICNHQRTVSKSHSAQM 802
Query: 769 LRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKI 590
RLNEKI+ELK +EELK+DLSR KKGKPP +K ADG+PKRNLNPESLE+KIAQTNAKI
Sbjct: 803 SRLNEKIDELKTALEELKTDLSRAKKGKPP--AKGADGEPKRNLNPESLERKIAQTNAKI 860
Query: 589 EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDV 410
EKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKRHEVPIEKIFNKSLLAKF W+MDV
Sbjct: 861 EKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWSMDV 920
Query: 409 DPSFRF 392
DPSFRF
Sbjct: 921 DPSFRF 926
Score = 169 bits (429), Expect = 5e-39
Identities = 99/185 (53%), Positives = 121/185 (65%), Gaps = 9/185 (4%)
Frame = -1
Query: 2722 KPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTNQVSKEGS 2543
K N HKS+ E K P A+ ++SE SDD KPL R S SSKG +N +KEG
Sbjct: 120 KQQNHHKSSAAFIEPK--PSVPAAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGG 177
Query: 2542 KP---------ENEDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDKPLAKKLQHNGSAMR 2390
E+EDS+DEKPLS RFP KS +GESTS +YDSD+ KPLA K+Q NGSA R
Sbjct: 178 DSCSIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLATKVQQNGSASR 237
Query: 2389 DGQPNKYSNMSNKRPPGEIKSSNQLSVKKPKLSSVTPPTNKKQASVKPEPKAEXXXXDHL 2210
DG NK +++ NKR PGE+KS NQ S+KK KLSS + KQA+VKPEPKAE D++
Sbjct: 238 DGPMNKSASLLNKRAPGEVKSLNQSSLKKAKLSSPITSISNKQAAVKPEPKAE-DDDDNI 296
Query: 2209 PISQR 2195
P+SQR
Sbjct: 297 PLSQR 301
>dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]
Length = 926
Score = 929 bits (2402), Expect = 0.0
Identities = 460/546 (84%), Positives = 484/546 (88%), Gaps = 1/546 (0%)
Frame = -1
Query: 2026 WNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENF 1847
W L HNGV+FPPPYKPHG+KMLYK +P+ LTPEQEEVATMFAVMLDTDYMNKPRFKENF
Sbjct: 383 WTTLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEEVATMFAVMLDTDYMNKPRFKENF 442
Query: 1846 FGDWKKILGKNHVIQNLEDCDFTPIYEWHQSXXXXXXXXXXXXXXXXXXXXXXXXXKYMW 1667
F DWKKILGKNH IQNLEDCDF PIYEWHQ KYMW
Sbjct: 443 FSDWKKILGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTEEKKALKEERLQQEEKYMW 502
Query: 1666 AWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGE 1487
A VDG KEKVGNFRVEPPGLFRGRGEHPK+GKLKKRIRP DITINIGKDAPIPECP+PGE
Sbjct: 503 AIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIRPRDITINIGKDAPIPECPIPGE 562
Query: 1486 RWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIR 1307
RWKEVR+DNTVTWLA+WNDP+N KE KYVFLAASSTLKG S KEKYEKAR+LKDYI GIR
Sbjct: 563 RWKEVRNDNTVTWLAYWNDPVNIKECKYVFLAASSTLKGQSVKEKYEKARVLKDYIHGIR 622
Query: 1306 AAYTKNFAS-KDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 1130
AAYTK F + KDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN
Sbjct: 623 AAYTKGFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 682
Query: 1129 ILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPG 950
ILK DF+GKDSIRYQNEV+VE AVFKAIQQFRSGKEGS DLFD LDTSKLNAHLKELMPG
Sbjct: 683 ILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPG 742
Query: 949 LTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQM 770
LTAKVFRTYNASITLDDMLS+ETKGG +AEKV VYQHANKEVAIICNHQRTVSKSHSAQM
Sbjct: 743 LTAKVFRTYNASITLDDMLSKETKGGKIAEKVAVYQHANKEVAIICNHQRTVSKSHSAQM 802
Query: 769 LRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKI 590
RLNEKI+ELK +EELK+DLSR KKGKPP SK+ADG+PKRNLNPESLE+KIAQTNAKI
Sbjct: 803 SRLNEKIDELKTALEELKTDLSRAKKGKPP--SKDADGEPKRNLNPESLERKIAQTNAKI 860
Query: 589 EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDV 410
EKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKR EVPIEK+FNKSLLAKF WAMDV
Sbjct: 861 EKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQEVPIEKMFNKSLLAKFAWAMDV 920
Query: 409 DPSFRF 392
DPSFRF
Sbjct: 921 DPSFRF 926
Score = 168 bits (426), Expect = 1e-38
Identities = 98/185 (52%), Positives = 121/185 (65%), Gaps = 9/185 (4%)
Frame = -1
Query: 2722 KPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTNQVSKEGS 2543
K N HKS+ E K P A+ ++SE SDD KPL R S SS G +N +KEG
Sbjct: 120 KQQNHHKSSAAFIEPK--PSVPAAKANSNSESSDDEKPLIARTSGCSSMGKSNHANKEGG 177
Query: 2542 KP---------ENEDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDKPLAKKLQHNGSAMR 2390
E+EDS+DEKPLS RFP KS +GESTS +YDSD+ KPLA K+Q NGSA
Sbjct: 178 DSCSIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASP 237
Query: 2389 DGQPNKYSNMSNKRPPGEIKSSNQLSVKKPKLSSVTPPTNKKQASVKPEPKAEXXXXDHL 2210
+G NK +++SNKR PGE+KS NQ S+KKPKLSS + KQA+VKPEPKAE D++
Sbjct: 238 EGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAE-DDDDNI 296
Query: 2209 PISQR 2195
P+SQR
Sbjct: 297 PLSQR 301
>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
Length = 894
Score = 926 bits (2392), Expect = 0.0
Identities = 452/545 (82%), Positives = 484/545 (88%)
Frame = -1
Query: 2026 WNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENF 1847
WN L HNGVIFPPPYKPHG+KMLYKGKPVDLTPEQEEVATMFAVMLDTDYM K +FKENF
Sbjct: 352 WNTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMTKSKFKENF 411
Query: 1846 FGDWKKILGKNHVIQNLEDCDFTPIYEWHQSXXXXXXXXXXXXXXXXXXXXXXXXXKYMW 1667
DW+KILGKNHVIQNLEDCDFTPIYEWHQ KYMW
Sbjct: 412 MDDWRKILGKNHVIQNLEDCDFTPIYEWHQREKEKKKKMTAEEKKVLKEERLKQEEKYMW 471
Query: 1666 AWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGE 1487
A V+G KEKVGNFRVEPP LFRGRGEHPKMGKLKK IRP DITINIGKDAPIPECP+PGE
Sbjct: 472 AIVNGVKEKVGNFRVEPPSLFRGRGEHPKMGKLKKCIRPSDITINIGKDAPIPECPIPGE 531
Query: 1486 RWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIR 1307
WKE+RHDNTVTWLAFWNDPI P+EFKYVFLAASS+LKG SDKEKYEKARLLKD+IQGIR
Sbjct: 532 SWKEIRHDNTVTWLAFWNDPIKPREFKYVFLAASSSLKGQSDKEKYEKARLLKDFIQGIR 591
Query: 1306 AAYTKNFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNI 1127
AAYTK+FASKD TK+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEP PP+I
Sbjct: 592 AAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPKPPSI 651
Query: 1126 LKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPGL 947
LKFDFLGKDSIRYQNEVEVE V+KAIQQFR+GK G DLFD LDTSKLNAHLK LMPGL
Sbjct: 652 LKFDFLGKDSIRYQNEVEVELPVYKAIQQFRTGKRGGDDLFDKLDTSKLNAHLKGLMPGL 711
Query: 946 TAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQML 767
TAKVFRTYNASITLD+MLSRETKGG+VAEK+VVYQHANKEVAIICNHQRTVSKSH AQM
Sbjct: 712 TAKVFRTYNASITLDEMLSRETKGGNVAEKIVVYQHANKEVAIICNHQRTVSKSHPAQMT 771
Query: 766 RLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKIE 587
RLN KI+ELK +++ L++DL+R KKGKPPL ++ADGKPKRNL PE+LE+KI QTNAKIE
Sbjct: 772 RLNGKIDELKGILDGLQTDLARAKKGKPPL--EDADGKPKRNLTPEALERKIGQTNAKIE 829
Query: 586 KMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVD 407
KMERDKETKE LKT+ALGTSKI+YLDPRITVAWCKRHEVPIEK+FNKSLLAKF W+MDVD
Sbjct: 830 KMERDKETKEGLKTIALGTSKISYLDPRITVAWCKRHEVPIEKVFNKSLLAKFAWSMDVD 889
Query: 406 PSFRF 392
PSFRF
Sbjct: 890 PSFRF 894
Score = 134 bits (337), Expect = 2e-28
Identities = 86/191 (45%), Positives = 109/191 (57%), Gaps = 14/191 (7%)
Frame = -1
Query: 2722 KPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTNQVSK--- 2552
K ++ + V+KEEK L + DS+D KPLS R +KG++N +K
Sbjct: 112 KHSSKQNTINVVKEEKE----LVNPAAEPYGDSEDEKPLSARLFTGLTKGSSNNANKGLI 167
Query: 2551 -------EGSKPE----NEDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDKPLAKKLQHN 2405
KPE ++DSDDE PLSS+F LK+ G ST +Y+SDD+K L Q N
Sbjct: 168 NSSPASLPVPKPEINRYSDDSDDEIPLSSKFRLKANAGTSTVKSYESDDNKTLVSNFQQN 227
Query: 2404 GSAMRDGQPNKYSNMSNKRPPGEIKSSNQLSVKKPKLSSVTPPTNKKQASVKPEPKAEXX 2225
GS R +K S NKRP GE+KSS Q SVKKPKLS + P N KQAS K EPKA+
Sbjct: 228 GSINRG---SKSSIKVNKRPLGEVKSSVQSSVKKPKLSDASTPVNNKQASKKAEPKADDS 284
Query: 2224 XXDHLPISQRI 2192
DH+PISQR+
Sbjct: 285 DDDHVPISQRM 295
>dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]
Length = 926
Score = 925 bits (2390), Expect = 0.0
Identities = 458/546 (83%), Positives = 482/546 (88%), Gaps = 1/546 (0%)
Frame = -1
Query: 2026 WNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENF 1847
W L HNGV+FPPPYKPHG+KMLYK +P+ LTPEQEEVATMFA MLDTDYMNKPRFKENF
Sbjct: 383 WTTLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEEVATMFAAMLDTDYMNKPRFKENF 442
Query: 1846 FGDWKKILGKNHVIQNLEDCDFTPIYEWHQSXXXXXXXXXXXXXXXXXXXXXXXXXKYMW 1667
F DWKKILGKNH IQNLEDCDF PIYEWHQ KYMW
Sbjct: 443 FSDWKKILGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTEEKKALKEERLQLEEKYMW 502
Query: 1666 AWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGE 1487
A VDG KEKVGNFRVEPPGLFRGRGEHPK+GKLKKRIRP DITINIGKDAPIPECP+PGE
Sbjct: 503 AIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIRPRDITINIGKDAPIPECPIPGE 562
Query: 1486 RWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIR 1307
RWKEVR+DNTVTWLA+WNDP+N KE KYVFLAASSTLKG SDKEKYEKARLLKDYI GIR
Sbjct: 563 RWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIR 622
Query: 1306 AAYTKNFAS-KDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 1130
AAYTK+F + KDP KKQ+AVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN
Sbjct: 623 AAYTKDFTNNKDPMKKQVAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 682
Query: 1129 ILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPG 950
ILK DF+GKDSIRYQNEV+VE AVFKAIQQFRSGKEGS DLFD LDTSKLNAHLKELMPG
Sbjct: 683 ILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPG 742
Query: 949 LTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQM 770
LTAKVFRTYNASITLDDMLS+ETKGG VAEKV VYQ ANKEVAIICNHQRTVSKSHSAQM
Sbjct: 743 LTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQRANKEVAIICNHQRTVSKSHSAQM 802
Query: 769 LRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKI 590
RLNEKI+ELK +EELK+DLSR KKGKPP SK DG+PKRNLNPE+LE+KIAQTNAKI
Sbjct: 803 SRLNEKIDELKTALEELKTDLSRAKKGKPP--SKGDDGEPKRNLNPEALERKIAQTNAKI 860
Query: 589 EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDV 410
EKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKR EVPIEK+FNKSLLAKF WAMDV
Sbjct: 861 EKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQEVPIEKMFNKSLLAKFAWAMDV 920
Query: 409 DPSFRF 392
DPSFRF
Sbjct: 921 DPSFRF 926
Score = 174 bits (440), Expect = 3e-40
Identities = 100/185 (54%), Positives = 123/185 (66%), Gaps = 9/185 (4%)
Frame = -1
Query: 2722 KPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTNQVSKEGS 2543
K N HKS+ E K P A+ ++SE SDD KPL R S SSKG +N +KEG
Sbjct: 120 KQQNHHKSSAAFIEPK--PSVPAAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGG 177
Query: 2542 KP---------ENEDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDKPLAKKLQHNGSAMR 2390
E+EDS+DEKPLS RFP KS +GESTS ++DSD+ KPLA K+Q NGSA R
Sbjct: 178 DSCSIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSHDSDEKKPLAAKVQQNGSASR 237
Query: 2389 DGQPNKYSNMSNKRPPGEIKSSNQLSVKKPKLSSVTPPTNKKQASVKPEPKAEXXXXDHL 2210
DG NK +++SNKR PGE+KS NQ S+KKPKLSS + KQA+VKPEPKAE D++
Sbjct: 238 DGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSTITSISNKQAAVKPEPKAE-DDDDNI 296
Query: 2209 PISQR 2195
P+SQR
Sbjct: 297 PLSQR 301
>dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]
Length = 926
Score = 924 bits (2389), Expect = 0.0
Identities = 458/546 (83%), Positives = 481/546 (88%), Gaps = 1/546 (0%)
Frame = -1
Query: 2026 WNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENF 1847
W L HNGV+FPPPYKPHG+KMLYK +P+ LTPEQEEVATMFA MLDTDYMNKPRFKENF
Sbjct: 383 WTTLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEEVATMFAAMLDTDYMNKPRFKENF 442
Query: 1846 FGDWKKILGKNHVIQNLEDCDFTPIYEWHQSXXXXXXXXXXXXXXXXXXXXXXXXXKYMW 1667
F DWKKILGKNH IQNLEDCDF PIYEWHQ KYMW
Sbjct: 443 FSDWKKILGKNHTIQNLEDCDFGPIYEWHQQEREKKKQMTTEEKKALKDERLQLEEKYMW 502
Query: 1666 AWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGE 1487
A VDG KEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI P DITINIGKDAPIPECP+PGE
Sbjct: 503 AIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIHPRDITINIGKDAPIPECPIPGE 562
Query: 1486 RWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIR 1307
RWKEVR+DNTVTWLA+WNDP+N KE KYVFLA SSTLKG SDKEKYEKARLLKDYI GIR
Sbjct: 563 RWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAPSSTLKGQSDKEKYEKARLLKDYIHGIR 622
Query: 1306 AAYTKNFAS-KDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 1130
AAYTK+F + KDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN
Sbjct: 623 AAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 682
Query: 1129 ILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPG 950
ILK DF+GKDSIRYQNEV+VE AVFKAIQQFRSGKEGS DLFD LDTSKLNAHLKELMPG
Sbjct: 683 ILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPG 742
Query: 949 LTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQM 770
LTAKVFRTYNASITLDDMLS+ETKGG VAEKV VYQHANKEVAIICNHQRTVSKSHSAQM
Sbjct: 743 LTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQHANKEVAIICNHQRTVSKSHSAQM 802
Query: 769 LRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKI 590
RLNEKI+ELK +EELK+DLSR KKGKPP SK DG+PKRNLNPE+LE+KIAQTNAKI
Sbjct: 803 SRLNEKIDELKTALEELKTDLSRAKKGKPP--SKGDDGEPKRNLNPEALERKIAQTNAKI 860
Query: 589 EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDV 410
EKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKR EVPIEK+FNKSLLAKF WAMDV
Sbjct: 861 EKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQEVPIEKMFNKSLLAKFAWAMDV 920
Query: 409 DPSFRF 392
DPSFRF
Sbjct: 921 DPSFRF 926
Score = 174 bits (440), Expect = 3e-40
Identities = 102/187 (54%), Positives = 123/187 (65%), Gaps = 11/187 (5%)
Frame = -1
Query: 2722 KPFNQHKSATVIKEEKSS--PLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTNQVSKE 2549
K N HKS+ E K S P + S +SE SDD KPL R S SSKG +N +KE
Sbjct: 120 KQQNHHKSSAAFIEPKPSVPPAKANS----NSESSDDEKPLIARTSGCSSKGKSNHANKE 175
Query: 2548 GSKP---------ENEDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDKPLAKKLQHNGSA 2396
G E+EDS+DEKPLS RFP KS +GESTS +YDSD+ KPLA K+Q NGSA
Sbjct: 176 GGDSCSIRRPVVEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSA 235
Query: 2395 MRDGQPNKYSNMSNKRPPGEIKSSNQLSVKKPKLSSVTPPTNKKQASVKPEPKAEXXXXD 2216
RDG NK +++SNKR PGE+KS NQ S+KKPKLSS + KQA+VKPEPKAE D
Sbjct: 236 SRDGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAE-DDDD 294
Query: 2215 HLPISQR 2195
++P+SQR
Sbjct: 295 NIPLSQR 301
>dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea]
Length = 920
Score = 912 bits (2357), Expect = 0.0
Identities = 452/539 (83%), Positives = 476/539 (88%), Gaps = 1/539 (0%)
Frame = -1
Query: 2026 WNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENF 1847
W L HNGVIFPPPYKPHG+KMLYK +P+ LTPEQEEVATMFAVMLDTDYMNKPRFKENF
Sbjct: 383 WTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMFAVMLDTDYMNKPRFKENF 442
Query: 1846 FGDWKKILGKNHVIQNLEDCDFTPIYEWHQSXXXXXXXXXXXXXXXXXXXXXXXXXKYMW 1667
F DWKK+LGKNH IQNLEDCDF PIYEWHQ KYMW
Sbjct: 443 FSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTEEKKALKEERLQQEEKYMW 502
Query: 1666 AWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGE 1487
VDG KEKVGNFRVEPPGLFRGRGEHPK+GKLKKRIRP DITINIGKDAPIPECP+PGE
Sbjct: 503 VIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIRPRDITINIGKDAPIPECPIPGE 562
Query: 1486 RWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIR 1307
RWKEVR+DNTVTWLA+WNDPIN KE KYVFL ASSTLKG SDKEKYEKARLLKDYI GIR
Sbjct: 563 RWKEVRNDNTVTWLAYWNDPINQKERKYVFLGASSTLKGQSDKEKYEKARLLKDYIHGIR 622
Query: 1306 AAYTKNFAS-KDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 1130
AAYTK+F + KDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN
Sbjct: 623 AAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 682
Query: 1129 ILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPG 950
ILK DF+GKDSIRYQNEV+VE AVFKAIQQFRSGKEGS+DLFD LDTSKLNAHLKELMPG
Sbjct: 683 ILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSADLFDRLDTSKLNAHLKELMPG 742
Query: 949 LTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQM 770
LTAKVFRTYNASITLDDMLS+ETKGG VAEKV VYQHANKEVAIICNHQRTVSKSHSAQM
Sbjct: 743 LTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQHANKEVAIICNHQRTVSKSHSAQM 802
Query: 769 LRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKI 590
RLNEKI+ELK +EELK+DLSR KKGKPP SK ADG+PKRNLNPE+LE+KIAQTNAKI
Sbjct: 803 SRLNEKIDELKTALEELKTDLSRAKKGKPP--SKGADGEPKRNLNPEALERKIAQTNAKI 860
Query: 589 EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMD 413
EKME DK+TKEDLK VAL TSKI+YL PRITVAWCKRHEVPIEK+FNKSLLAKF WAM+
Sbjct: 861 EKMEGDKKTKEDLKAVALSTSKISYLGPRITVAWCKRHEVPIEKMFNKSLLAKFAWAMN 919
Score = 174 bits (441), Expect = 2e-40
Identities = 101/185 (54%), Positives = 123/185 (66%), Gaps = 9/185 (4%)
Frame = -1
Query: 2722 KPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTNQVSKEGS 2543
K N HKS+ E K P A+ ++SE SDD KPL R S SSKG +N +KEG
Sbjct: 120 KQQNHHKSSAAFIEPK--PSVPAAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGG 177
Query: 2542 KP---------ENEDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDKPLAKKLQHNGSAMR 2390
E+EDS+DEKPLS RFP KS +GESTS +YDSD+ KPLA K+Q NGSA R
Sbjct: 178 DSCSIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASR 237
Query: 2389 DGQPNKYSNMSNKRPPGEIKSSNQLSVKKPKLSSVTPPTNKKQASVKPEPKAEXXXXDHL 2210
DG NK +++SNKR PGE+KS NQ S+KKPKLSS + KQA+VKPEPKAE D++
Sbjct: 238 DGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAE-DDDDNI 296
Query: 2209 PISQR 2195
P+SQR
Sbjct: 297 PLSQR 301
>emb|CAB46363.1| DNA topoisomerase I [Daucus carota]
Length = 909
Score = 912 bits (2357), Expect = 0.0
Identities = 487/809 (60%), Positives = 560/809 (69%), Gaps = 27/809 (3%)
Frame = -1
Query: 2737 GSVKLKPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTNQV 2558
G+ + + +Q ++K E+ S + + SEDSDD KPL+ R SKG+ ++V
Sbjct: 106 GADQSRQNSQQNRTAIVKAERPSGIPKEEPD-SGSEDSDDDKPLNSRLPVGGSKGSISEV 164
Query: 2557 SKEGSKP-----------ENEDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDKPLAKKLQ 2411
++ S + EDS+D+ PLS +F KS GES SNAYDSD+ KP A K +
Sbjct: 165 NRRPSSSGPAAFEKDLGIKEEDSEDDIPLSHKFKQKSNAGES-SNAYDSDEGKPFASKPR 223
Query: 2410 HNGSAMRDGQPNKYSNMSNKRPPGEIKSSNQLSVKKPKLSSVTPPTNKKQASVKPEPKAE 2231
NG+ ++D N S NKRP E+K S Q VKK + K +P+ +A+
Sbjct: 224 QNGTNVKDNVKNP-STAINKRPSAEVKCSGQSPVKKATVQLHLHQVRKLTVKAEPKKEAD 282
Query: 2230 XXXXDHLPISQRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2051
D+ ISQR+
Sbjct: 283 DSDDDNATISQRVKKPATPISKASDKKKSAVSVSSSLNKVNKNSKKITKSTQFSKSLKVP 342
Query: 2050 XXXXXXXKWNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMN 1871
KW L HNGVIFPPPYKPHG+KMLYK PVDLT QEEV + + + T+Y+
Sbjct: 343 PGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKESPVDLTLNQEEVHMIAVMQILTEYLT 402
Query: 1870 KPRFKENFFGDWKKILGKNHVIQNLEDCDFTPIYEWHQSXXXXXXXXXXXXXXXXXXXXX 1691
KP F+EN DWK ILG+NH+I+NL+DCDFTPIYEW +
Sbjct: 403 KPVFRENVMNDWKIILGRNHIIKNLDDCDFTPIYEWFRLKKEKKKQMSAEEKKAVKEEKL 462
Query: 1690 XXXXKYMWAWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPI 1511
KYMWA VDG KE VGNFRVEPPGLFRGR PKMGKLKKRI P DITINIGKDAPI
Sbjct: 463 KQEEKYMWAVVDGVKENVGNFRVEPPGLFRGRESIPKMGKLKKRISPSDITINIGKDAPI 522
Query: 1510 PECPVPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLL 1331
PECP+PGE WKEVRHDNTVTWLA+WNDPIN KEFKYVFLAASS+LKG SDKEKYEKAR L
Sbjct: 523 PECPIPGESWKEVRHDNTVTWLAYWNDPINGKEFKYVFLAASSSLKGQSDKEKYEKARKL 582
Query: 1330 KDYIQGIRAAYTKNFASKDPTKKQIAVATYLIDKLALRAGN----------------EKD 1199
K YI+GIR AYTK+F+SKD TK+QIAVATYLIDKLALRAGN EKD
Sbjct: 583 KGYIEGIRTAYTKDFSSKDVTKRQIAVATYLIDKLALRAGNAVATYLIDKLALRAGNEKD 642
Query: 1198 DDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEG 1019
DDEADTVGCCTLKVENVEP +LK DFL KDSIRYQ VEVE VFKAIQQFRSGK+G
Sbjct: 643 DDEADTVGCCTLKVENVEPRNNPLLKLDFLPKDSIRYQKRVEVEIPVFKAIQQFRSGKKG 702
Query: 1018 SSDLFDLLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQH 839
S +LFD LDT KLNAHLKELMPGL+AKVFRTYNASITLD+ML++ETKGGDV++KV VYQH
Sbjct: 703 SDNLFDKLDTCKLNAHLKELMPGLSAKVFRTYNASITLDEMLNKETKGGDVSQKVAVYQH 762
Query: 838 ANKEVAIICNHQRTVSKSHSAQMLRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNAD 659
ANKEVAIICNHQR+VSKSHS QM+RL+EKI +LK +EELK+DLSR KKGKPPL K +D
Sbjct: 763 ANKEVAIICNHQRSVSKSHSTQMMRLDEKINKLKNFIEELKTDLSRAKKGKPPL--KGSD 820
Query: 658 GKPKRNLNPESLEKKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKR 479
GK KRN+NPE++EKKIAQTN KIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKR
Sbjct: 821 GKTKRNMNPEAIEKKIAQTNVKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKR 880
Query: 478 HEVPIEKIFNKSLLAKFTWAMDVDPSFRF 392
+EVPIEK+FNKSLLAKF WAMDV+PSFRF
Sbjct: 881 YEVPIEKMFNKSLLAKFAWAMDVEPSFRF 909
>dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]
Length = 920
Score = 908 bits (2347), Expect = 0.0
Identities = 450/539 (83%), Positives = 475/539 (88%), Gaps = 1/539 (0%)
Frame = -1
Query: 2026 WNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENF 1847
W L HNGVIFPPPYKPHG+KMLYK +P+ LTPEQEEVATMFAVMLDTDYMNKPRFKENF
Sbjct: 383 WTTLVHNGVIFPPPYKPHGVKMLYKRQPLTLTPEQEEVATMFAVMLDTDYMNKPRFKENF 442
Query: 1846 FGDWKKILGKNHVIQNLEDCDFTPIYEWHQSXXXXXXXXXXXXXXXXXXXXXXXXXKYMW 1667
F DWKK+LGKNH IQNLEDCDF PIYEWHQ KYMW
Sbjct: 443 FSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEREKKKQMTTEEKKALKDERLQQEEKYMW 502
Query: 1666 AWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGE 1487
A VDG KEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI P DITINIGKDAPIPECP+PGE
Sbjct: 503 AIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIHPRDITINIGKDAPIPECPIPGE 562
Query: 1486 RWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIR 1307
RWKEVR+DNTVTWLA+WNDP+N KE KYVFLA SSTLKG SDKEKYEKARLLKDYI GIR
Sbjct: 563 RWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAPSSTLKGQSDKEKYEKARLLKDYIHGIR 622
Query: 1306 AAYTKNFAS-KDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 1130
AAYTK+F + KDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTL+VENVEPVPPN
Sbjct: 623 AAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLRVENVEPVPPN 682
Query: 1129 ILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPG 950
ILK DF+GKDSIRYQNEV+VE AVFKAIQQFRSGKEGS DLFD LDTSKLNAHLKELMPG
Sbjct: 683 ILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPG 742
Query: 949 LTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQM 770
LTAKVFRTYNASITLDDMLS+ETKGG VAEKV VYQHANKEVAIICNHQRTVSKSHSAQM
Sbjct: 743 LTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQHANKEVAIICNHQRTVSKSHSAQM 802
Query: 769 LRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKI 590
RLNEKI+ELK +EELK+DLSR KKGKPP SK DG+PKRNLNPE+LE+KIAQTNAKI
Sbjct: 803 SRLNEKIDELKTALEELKTDLSRAKKGKPP--SKGDDGEPKRNLNPEALERKIAQTNAKI 860
Query: 589 EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMD 413
EKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKR EVPIEK+FNKSLLAKF WAM+
Sbjct: 861 EKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQEVPIEKMFNKSLLAKFAWAMN 919
Score = 174 bits (440), Expect = 3e-40
Identities = 102/187 (54%), Positives = 123/187 (65%), Gaps = 11/187 (5%)
Frame = -1
Query: 2722 KPFNQHKSATVIKEEKSS--PLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTNQVSKE 2549
K N HKS+ E K S P + S +SE SDD KPL R S SSKG +N +KE
Sbjct: 120 KQQNHHKSSAAFIEPKPSVPPAKANS----NSESSDDEKPLIARTSGCSSKGKSNHANKE 175
Query: 2548 GSKP---------ENEDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDKPLAKKLQHNGSA 2396
G E+EDS+DEKPLS RFP KS +GESTS +YDSD+ KPLA K+Q NGSA
Sbjct: 176 GGDSCSIRRPVVEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSA 235
Query: 2395 MRDGQPNKYSNMSNKRPPGEIKSSNQLSVKKPKLSSVTPPTNKKQASVKPEPKAEXXXXD 2216
RDG NK +++SNKR PGE+KS NQ S+KKPKLSS + KQA+VKPEPKAE D
Sbjct: 236 SRDGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAE-DDDD 294
Query: 2215 HLPISQR 2195
++P+SQR
Sbjct: 295 NIPLSQR 301
>dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana]
Length = 920
Score = 896 bits (2316), Expect = 0.0
Identities = 446/539 (82%), Positives = 472/539 (87%), Gaps = 1/539 (0%)
Frame = -1
Query: 2026 WNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENF 1847
W L HNGV+F PPYKPHG+KMLYK +P+ LTPEQEEVATMFAVMLDTDYM KPRFKENF
Sbjct: 383 WTTLVHNGVMFLPPYKPHGVKMLYKQQPLTLTPEQEEVATMFAVMLDTDYMTKPRFKENF 442
Query: 1846 FGDWKKILGKNHVIQNLEDCDFTPIYEWHQSXXXXXXXXXXXXXXXXXXXXXXXXXKYMW 1667
F DWKK+LGKNH +QNLEDCDF PIYEWHQ KYM
Sbjct: 443 FSDWKKMLGKNHTVQNLEDCDFGPIYEWHQQEKEKRKQMTTEEKKALKEERLQQEEKYMR 502
Query: 1666 AWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGE 1487
A VDG KEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI P DITINIGKDAPIPECP+PGE
Sbjct: 503 AIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIHPRDITINIGKDAPIPECPIPGE 562
Query: 1486 RWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIR 1307
RWKEVR+DNTVTWLA+WNDP+N KE KYVFLA SSTLKG SDKEKYEKARLLKDYI GIR
Sbjct: 563 RWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAPSSTLKGQSDKEKYEKARLLKDYIHGIR 622
Query: 1306 AAYTKNFAS-KDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 1130
AAYTK+F + KDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN
Sbjct: 623 AAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 682
Query: 1129 ILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPG 950
ILK DF+GKDSIRYQNEV+VE AVFKAIQQFRSGKEGS DLFD LDTSKLNAHLKELMPG
Sbjct: 683 ILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPG 742
Query: 949 LTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQM 770
LTAKVFRTYNASITLDDMLS+ETKGG VAEKV VYQHANKEVAIICNHQRTVSKSHSAQM
Sbjct: 743 LTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQHANKEVAIICNHQRTVSKSHSAQM 802
Query: 769 LRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKI 590
RLNEKI+ELK +EELK+DLSR KKGKPP SK DG+PKRNLNPE+LE+KIAQTNAKI
Sbjct: 803 SRLNEKIDELKTALEELKTDLSRAKKGKPP--SKGDDGEPKRNLNPEALERKIAQTNAKI 860
Query: 589 EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMD 413
EKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKR EVPIEK+FNKSLLAKF WAM+
Sbjct: 861 EKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQEVPIEKMFNKSLLAKFAWAMN 919
Score = 174 bits (440), Expect = 3e-40
Identities = 102/187 (54%), Positives = 123/187 (65%), Gaps = 11/187 (5%)
Frame = -1
Query: 2722 KPFNQHKSATVIKEEKSS--PLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTNQVSKE 2549
K N HKS+ E K S P + S +SE SDD KPL R S SSKG +N +KE
Sbjct: 120 KQQNHHKSSAAFIEPKPSVPPAKANS----NSESSDDEKPLIARTSGCSSKGKSNHANKE 175
Query: 2548 GSKP---------ENEDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDKPLAKKLQHNGSA 2396
G E+EDS+DEKPLS RFP KS +GESTS +YDSD+ KPLA K+Q NGSA
Sbjct: 176 GGDSCSIRRPVVEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSA 235
Query: 2395 MRDGQPNKYSNMSNKRPPGEIKSSNQLSVKKPKLSSVTPPTNKKQASVKPEPKAEXXXXD 2216
RDG NK +++SNKR PGE+KS NQ S+KKPKLSS + KQA+VKPEPKAE D
Sbjct: 236 SRDGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAE-DDDD 294
Query: 2215 HLPISQR 2195
++P+SQR
Sbjct: 295 NIPLSQR 301
>ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis sativus]
gi|449503189|ref|XP_004161878.1| PREDICTED: DNA
topoisomerase 1-like [Cucumis sativus]
Length = 889
Score = 895 bits (2314), Expect = 0.0
Identities = 436/545 (80%), Positives = 475/545 (87%)
Frame = -1
Query: 2026 WNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENF 1847
W L HNGVIFPPPY+ HG+KMLYKGKPVDLTP QEEVATMFAVM DTDYM KP+FKENF
Sbjct: 347 WTTLVHNGVIFPPPYQTHGVKMLYKGKPVDLTPPQEEVATMFAVMKDTDYMLKPKFKENF 406
Query: 1846 FGDWKKILGKNHVIQNLEDCDFTPIYEWHQSXXXXXXXXXXXXXXXXXXXXXXXXXKYMW 1667
+ DW+K+LGKNHVIQNL+DCDFTPIY+W+Q KYMW
Sbjct: 407 WNDWRKLLGKNHVIQNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKAVKEEKLKQEEKYMW 466
Query: 1666 AWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGE 1487
A +DG KEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI P DITINIGK APIPECP+PGE
Sbjct: 467 AILDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRICPSDITINIGKGAPIPECPIPGE 526
Query: 1486 RWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIR 1307
RWKEVRHDNTVTWLAFWNDPIN KEFKYVFLAASS+LKG SDKEKYEKAR+LKDYI+ IR
Sbjct: 527 RWKEVRHDNTVTWLAFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIR 586
Query: 1306 AAYTKNFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNI 1127
AYTK+F SKDPT++QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV+ VPPN+
Sbjct: 587 NAYTKDFTSKDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNL 646
Query: 1126 LKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPGL 947
L+F+FLGKDSIRY+N VEVE VFKAI QF+SGK G+ DLFD LDTSKLNAHLK+LMPGL
Sbjct: 647 LEFNFLGKDSIRYENTVEVELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGL 706
Query: 946 TAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQML 767
TAKVFRTYNASITLDDML+R TK G+V+EK+V YQHANKEVAIICNHQRTVSKSH AQM
Sbjct: 707 TAKVFRTYNASITLDDMLNRGTKNGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMT 766
Query: 766 RLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKIE 587
RLNEKI EL+ +++ELK DL R KKGKPPL K +DGK KRNL PE+LEKKI+QTNAKIE
Sbjct: 767 RLNEKISELRDILKELKIDLDRAKKGKPPL--KGSDGKQKRNLTPEALEKKISQTNAKIE 824
Query: 586 KMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVD 407
K+ERD +TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF WAMDVD
Sbjct: 825 KIERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVD 884
Query: 406 PSFRF 392
P FRF
Sbjct: 885 PDFRF 889
Score = 90.5 bits (223), Expect = 4e-15
Identities = 69/175 (39%), Positives = 94/175 (53%), Gaps = 8/175 (4%)
Frame = -1
Query: 2692 VIKEEKSSPLRLASAIINDSE---DSDDGKPLSLRHSASSS---KGNTNQVSKEGSKPEN 2531
V+KEE S IN S+ DS+D KPLS+R + + KG + V K K
Sbjct: 125 VVKEENVS--------INPSQENSDSEDDKPLSIRLKGNPNQPNKGLVSTVPKNKVKKSL 176
Query: 2530 EDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDKPLAKKLQHNGSAMRDGQPNKYSNMSNK 2351
DSDDE PLSS+F +K G S + D+ KPL K+ NGS RD + K + +S+K
Sbjct: 177 ADSDDEVPLSSKFQMKHASGVLGSKQHGFDEKKPLVPKVHQNGSTSRD-KLQKPAVLSSK 235
Query: 2350 RP-PGE-IKSSNQLSVKKPKLSSVTPPTNKKQASVKPEPKAEXXXXDHLPISQRI 2192
RP P E S +Q KKPKL+ + P N K S+K + + + D +PISQR+
Sbjct: 236 RPLPNEDSHSPSQFPTKKPKLTDSSSPLNSKLVSLKAKQEVD-DDDDDIPISQRM 289
>ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinifera]
gi|296082698|emb|CBI21703.3| unnamed protein product
[Vitis vinifera]
Length = 857
Score = 889 bits (2297), Expect = 0.0
Identities = 436/545 (80%), Positives = 473/545 (86%)
Frame = -1
Query: 2026 WNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENF 1847
W L HNGVIFPPPYKPHG+KMLYKGKPVDLTPEQEEVATMFAVMLDTDYM K +FKENF
Sbjct: 316 WTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMQKEKFKENF 375
Query: 1846 FGDWKKILGKNHVIQNLEDCDFTPIYEWHQSXXXXXXXXXXXXXXXXXXXXXXXXXKYMW 1667
DW+KILGKNHVIQ L+DCDFTPIYEWHQ KYMW
Sbjct: 376 MADWRKILGKNHVIQRLDDCDFTPIYEWHQEEKEKKKQMSTEEKKTLKEEKLKLEEKYMW 435
Query: 1666 AWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGE 1487
A VDG KEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI P DITINIGK++ IPECP+PGE
Sbjct: 436 AIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIHPSDITINIGKNSQIPECPIPGE 495
Query: 1486 RWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIR 1307
WKEV+HDNTVTWLAFWNDPINPKEFKYVFLAASS+LKG SDKEKYEKAR LK+YI+ IR
Sbjct: 496 SWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKNYIKDIR 555
Query: 1306 AAYTKNFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNI 1127
A YTK+F SKD TK+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV P PPN
Sbjct: 556 ATYTKDFVSKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVIPEPPNS 615
Query: 1126 LKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPGL 947
L+FDFLGKDSIRY+ VEVE V+KAI+QFR GK GS DLFD LDTSKLNAHLKELMPGL
Sbjct: 616 LQFDFLGKDSIRYEKTVEVELPVYKAIEQFRVGKSGSDDLFDKLDTSKLNAHLKELMPGL 675
Query: 946 TAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQML 767
TAKVFRTYNASITLD+ML+++TK GDVA+KVVVYQHANKEVAIICNHQRT+SKSH+AQM
Sbjct: 676 TAKVFRTYNASITLDEMLNKDTKEGDVAQKVVVYQHANKEVAIICNHQRTISKSHTAQMT 735
Query: 766 RLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKIE 587
RL EKI+E+K V+ LK+DL+R KKGKPPL K+ADGK +RNL PE+LE+KIAQTNAKIE
Sbjct: 736 RLTEKIDEMKGVLNGLKTDLARAKKGKPPL--KDADGK-RRNLTPEALERKIAQTNAKIE 792
Query: 586 KMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVD 407
KMERDK+TKEDLKTVALGTSKINYLDPRI+VAWCKR EVPIEK+FNKSLLAKF WAMDV
Sbjct: 793 KMERDKDTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKVFNKSLLAKFAWAMDVP 852
Query: 406 PSFRF 392
P FRF
Sbjct: 853 PDFRF 857
Score = 76.3 bits (186), Expect = 7e-11
Identities = 69/194 (35%), Positives = 94/194 (48%), Gaps = 12/194 (6%)
Frame = -1
Query: 2737 GSVKLKPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSAS--SSKGNTN 2564
GSVK P + V + + + A DS+D KPLS+R S+ KG++N
Sbjct: 82 GSVKSPPQQVGRGVVVGNSKVEAQNKKAEL----DSDSEDDKPLSVRLSSGLPKGKGSSN 137
Query: 2563 QVS--KEG----SKPENEDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDKPLAKKLQHNG 2402
V + G K E++D DD+ PLSS+F LK SD+ KPL K+ NG
Sbjct: 138 NVGLGRGGVGGVKKEEDDDDDDKIPLSSKFQLK------------SDEKKPLPLKVNQNG 185
Query: 2401 SA-MRDGQPNKYSNMSNKRPPGEIKSSNQLS--VKKPKLSSVT-PPTNKKQASVKPEPKA 2234
RD P + ++ KRP + SS S VKKPK+S + P A+ K EPK
Sbjct: 186 GTDKRDKSP---TVLNKKRPLDGVNSSLGQSSLVKKPKISGQSAQPFKVTHATAKAEPKV 242
Query: 2233 EXXXXDHLPISQRI 2192
E D +PISQR+
Sbjct: 243 EDDDDDDMPISQRM 256
>ref|XP_006279978.1| hypothetical protein CARUB_v10025848mg [Capsella rubella]
gi|482548682|gb|EOA12876.1| hypothetical protein
CARUB_v10025848mg [Capsella rubella]
Length = 915
Score = 888 bits (2295), Expect = 0.0
Identities = 473/811 (58%), Positives = 553/811 (68%), Gaps = 43/811 (5%)
Frame = -1
Query: 2695 TVIKEEKSSPLRLASAIINDSEDSDDGKPLSLR----------HSASSSKGNTNQVSKE- 2549
+V+ +E++ + S +D EDS+D KPLS R SS +G+ + ++
Sbjct: 106 SVVAKERNGLGKAPSVSKSDDEDSEDDKPLSARLKMDSKDLTKQPGSSGRGSMQKPGQKS 165
Query: 2548 -------GSKPENEDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDKPLAKKLQHNGSAMR 2390
G + + D+ P+SS K+ VG S+S ++ +PL + NG ++
Sbjct: 166 NMRPQGLGDNTKKKVLDERAPMSSTVQAKTSVGTSSSKPVHNEQKRPLVNNINRNG--LK 223
Query: 2389 DGQPNKYSNMSNKRPPGEIKSSNQLSVKKPKLS--------------SVTP--------- 2279
S KRP + SSNQ SVK+PKLS + TP
Sbjct: 224 PKTEGHSSQAPAKRPLEKGSSSNQSSVKRPKLSEPAKPLKVEQGSHSAATPDGKEKNLDA 283
Query: 2278 --PTNKKQASVKPEPKAEXXXXDHLPISQRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2105
P QA+VK + + H+PI+ R+
Sbjct: 284 SKPLRANQATVKEDNSDDDD---HVPIASRMKSDSSNNKASSAKPNSSKMIASSSRTIAK 340
Query: 2104 XXXXXXXXXXXXXXXXXXXXXXXXXKWNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPE 1925
KW LEHNGVIFPPPYK HG+K+LY+GKPVDLTPE
Sbjct: 341 KPNKWVKDSKFSKSSKSLPSGDGQTKWKTLEHNGVIFPPPYKRHGVKILYQGKPVDLTPE 400
Query: 1924 QEEVATMFAVMLDTDYMNKPRFKENFFGDWKKILGKNHVIQNLEDCDFTPIYEWHQSXXX 1745
QEEVATMFAVM +T+Y NKP+F+ENF+ DW+K+LGKNH+I+NL+DCDFTPIYEW
Sbjct: 401 QEEVATMFAVMRETEYYNKPKFRENFWNDWRKLLGKNHMIKNLDDCDFTPIYEWSMQEKE 460
Query: 1744 XXXXXXXXXXXXXXXXXXXXXXKYMWAWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLK 1565
KYMWA +DG +E++GNFRVEPPGLFRGRGEHPKMGKLK
Sbjct: 461 AKKQMSAEEKRIVKEEKLQQEEKYMWAVLDGVRERIGNFRVEPPGLFRGRGEHPKMGKLK 520
Query: 1564 KRIRPCDITINIGKDAPIPECPVPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAAS 1385
KRIRPCDITINIGK+APIPECP+ GERWKEV+HDNTVTWLAFWNDPINPKEFKYVFLAAS
Sbjct: 521 KRIRPCDITINIGKEAPIPECPIRGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAAS 580
Query: 1384 STLKGLSDKEKYEKARLLKDYIQGIRAAYTKNFASKDPTKKQIAVATYLIDKLALRAGNE 1205
S+LKG SDKEKYEKAR L ++I IRAAYTK+F +KD TK+QIAVATYLIDKLALRAGNE
Sbjct: 581 SSLKGQSDKEKYEKARKLHNHIGSIRAAYTKDFNNKDVTKRQIAVATYLIDKLALRAGNE 640
Query: 1204 KDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGK 1025
KDDDEADTVGCCTLKV NVE +PPN LKFDFLGKDSI+Y N VEVE V+KAI QF++GK
Sbjct: 641 KDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEPLVYKAIGQFQAGK 700
Query: 1024 EGSSDLFDLLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVY 845
+ DLFD LDTSKLNAHLKELM GLTAKVFRTYNASITLD MLS+ET+ GDV EKVVVY
Sbjct: 701 SKADDLFDELDTSKLNAHLKELMAGLTAKVFRTYNASITLDLMLSKETRDGDVPEKVVVY 760
Query: 844 QHANKEVAIICNHQRTVSKSHSAQMLRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKN 665
Q ANKEVAIICNHQRTVSKSH AQ+ +L KIEEL+ ++EL DL R KKG+ PL
Sbjct: 761 QQANKEVAIICNHQRTVSKSHGAQVEKLAVKIEELREQIKELNIDLDRAKKGRTPL--MG 818
Query: 664 ADGKPKRNLNPESLEKKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWC 485
+DGK KRNL PE+LEKKI QTN KIEKMERD +TKED+KTVALGTSKINY+DPRITVAWC
Sbjct: 819 SDGKRKRNLTPEALEKKIMQTNGKIEKMERDMQTKEDMKTVALGTSKINYMDPRITVAWC 878
Query: 484 KRHEVPIEKIFNKSLLAKFTWAMDVDPSFRF 392
KRH+VPIEKIFNKSLLAKF WAMDVDP FRF
Sbjct: 879 KRHDVPIEKIFNKSLLAKFAWAMDVDPEFRF 909
>ref|XP_006401468.1| hypothetical protein EUTSA_v10012622mg [Eutrema salsugineum]
gi|567179002|ref|XP_006401469.1| hypothetical protein
EUTSA_v10012622mg [Eutrema salsugineum]
gi|557102558|gb|ESQ42921.1| hypothetical protein
EUTSA_v10012622mg [Eutrema salsugineum]
gi|557102559|gb|ESQ42922.1| hypothetical protein
EUTSA_v10012622mg [Eutrema salsugineum]
Length = 904
Score = 884 bits (2283), Expect = 0.0
Identities = 471/804 (58%), Positives = 560/804 (69%), Gaps = 36/804 (4%)
Frame = -1
Query: 2695 TVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSA----------SSSKGNTN-QVSKE 2549
+V+ +E++ + S +D EDS+D KPLS R A SS +G++ V K
Sbjct: 106 SVVAKERNGLGKAPSVSKSDDEDSEDDKPLSARLKADSNQLSKRPSSSGRGSSQLPVQKS 165
Query: 2548 GSKP-------ENEDSDDEKPLSSRFPLKSGVGESTSNAYDSDDDK-PLAKKLQHNGSAM 2393
+P + +D D++ P+SS K+ VG S+S +++ K PL + NG
Sbjct: 166 SMRPHGVSDNTKKKDLDEKVPMSSTVQTKTSVGTSSSKPVKNNEQKRPLVNNVTRNGLKP 225
Query: 2392 RDGQPNKYSNMSN-KRPPGEIKSSNQLSVKKPKLSSVTPPTNKKQAS---VKPEPKA--- 2234
+ YS+++ KRP + SNQ SVK+ K+S P +Q S P+ K
Sbjct: 226 KI---EGYSSLAPAKRPLEKGSCSNQSSVKRLKVSEPARPVKIEQGSQNAATPDSKGKNL 282
Query: 2233 ----------EXXXXDHLPISQRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2084
+ DH+PI+ R+
Sbjct: 283 AVNQVTVKEDDSDCDDHVPIASRMKPDSSNNKSSSVKPNASRMIASSSRTIAKKPNKWVN 342
Query: 2083 XXXXXXXXXXXXXXXXXXKWNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATM 1904
KW LEHNGVIFPPPY HG+K+LY+GKPVDLTPEQEEVATM
Sbjct: 343 DSKYSKSSKSLPSGDGQKKWKTLEHNGVIFPPPYNCHGVKILYQGKPVDLTPEQEEVATM 402
Query: 1903 FAVMLDTDYMNKPRFKENFFGDWKKILGKNHVIQNLEDCDFTPIYEWHQSXXXXXXXXXX 1724
FAVM +T+Y +KP F++NF+ DW+K+LG+NHVI+NL+DCDF+PIYEW+
Sbjct: 403 FAVMRETEYYSKPMFRDNFWNDWRKLLGRNHVIKNLDDCDFSPIYEWYMQEKERKKQMNA 462
Query: 1723 XXXXXXXXXXXXXXXKYMWAWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCD 1544
KYMWA +DG +E+VGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCD
Sbjct: 463 EEKRLLKEEKLKLEEKYMWAVLDGVRERVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCD 522
Query: 1543 ITINIGKDAPIPECPVPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLS 1364
ITINIGK+AP+PECP+PGERWKEV+HDNTVTWLAFWNDPINPKEFKYVFLAASS LKGLS
Sbjct: 523 ITINIGKEAPVPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSALKGLS 582
Query: 1363 DKEKYEKARLLKDYIQGIRAAYTKNFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEAD 1184
DKEKYEKAR LKD+I IRAAYTK+F++KD TK+QIAVATYLIDKLALRAGNEKDDDEAD
Sbjct: 583 DKEKYEKARKLKDHIGHIRAAYTKDFSNKDVTKRQIAVATYLIDKLALRAGNEKDDDEAD 642
Query: 1183 TVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLF 1004
TVGCCTLKV NV+ +PPN LKFDFLGKDSI+Y N VEVE V+KAI QF++GK + DLF
Sbjct: 643 TVGCCTLKVGNVDCIPPNKLKFDFLGKDSIQYVNTVEVEPPVYKAIGQFQAGKSKTDDLF 702
Query: 1003 DLLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEV 824
D LDTSKLNAHLKELMPGLTAKVFRTYNASITLD MLS+ET+ G+V EKVVVYQ ANKEV
Sbjct: 703 DELDTSKLNAHLKELMPGLTAKVFRTYNASITLDQMLSKETRDGEVPEKVVVYQQANKEV 762
Query: 823 AIICNHQRTVSKSHSAQMLRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKR 644
AIICNHQRTVSKSH AQ+ +L KIEEL+ ++EL DL R KG+ PL +DGK KR
Sbjct: 763 AIICNHQRTVSKSHGAQVEKLAVKIEELREQIKELDIDLDRAMKGRTPL--MGSDGKRKR 820
Query: 643 NLNPESLEKKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPI 464
NL PE+L+KKI QTN+KIEKMERD +TKED+KTVALGTSKINY+DPRI+VAWCKRH+VPI
Sbjct: 821 NLTPEALKKKIMQTNSKIEKMERDMQTKEDMKTVALGTSKINYMDPRISVAWCKRHDVPI 880
Query: 463 EKIFNKSLLAKFTWAMDVDPSFRF 392
EKIFNKSLLAKF WAMDVDP FRF
Sbjct: 881 EKIFNKSLLAKFAWAMDVDPEFRF 904