BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00008886
         (262 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348570.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
ref|XP_004228912.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
gb|EOX92278.1| Tetratricopeptide repeat (TPR)-like superfamily p...    56   6e-06

>ref|XP_006348570.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Solanum tuberosum]
          Length = 851

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 37/84 (44%), Positives = 50/84 (59%)
 Frame = -3

Query: 254 EEFLLKIPQNRRTQRHKLSKXXXXXXXXXXXXXYFKAIHAKIIVSGFEANIFLNNILISV 75
           EE    I +NRRTQRH LSK              +K IH ++I+SGFE+N FLNNILI  
Sbjct: 43  EENYPTIRRNRRTQRHYLSKLLFTLSATH-----YKEIHTQVILSGFESNPFLNNILIQS 97

Query: 74  YSKYGHWQCACYLFDRLSERNLIT 3
           YS  G    A  +FD++ +R++I+
Sbjct: 98  YSIRGCLGYARKVFDKMPKRDMIS 121


>ref|XP_004228912.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Solanum lycopersicum]
          Length = 848

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/84 (42%), Positives = 47/84 (55%)
 Frame = -3

Query: 254 EEFLLKIPQNRRTQRHKLSKXXXXXXXXXXXXXYFKAIHAKIIVSGFEANIFLNNILISV 75
           EE    I +NRRTQRH LSK               K IH ++I+ GFE N FLNNILI  
Sbjct: 40  EENYTIIRRNRRTQRHYLSKLLFTLSTTHC-----KEIHTQVILCGFENNPFLNNILIQS 94

Query: 74  YSKYGHWQCACYLFDRLSERNLIT 3
           YS  G    A  +FD++ +R++I+
Sbjct: 95  YSIRGCLDYARKVFDKMPKRDMIS 118


>gb|EOX92278.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao]
          Length = 847

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/77 (38%), Positives = 46/77 (59%)
 Frame = -3

Query: 233 PQNRRTQRHKLSKXXXXXXXXXXXXXYFKAIHAKIIVSGFEANIFLNNILISVYSKYGHW 54
           P   R +R +L+              Y+K IHA+IIVSG E++ FL NIL+++YSK  + 
Sbjct: 42  PIKPRLKRRQLANLLQKLPSQDNPILYYKRIHAQIIVSGLESDSFLTNILLNLYSKCNNL 101

Query: 53  QCACYLFDRLSERNLIT 3
           +    LFDR+ E+NL++
Sbjct: 102 RHPSKLFDRMPEKNLVS 118