BLASTX nr result
ID: Catharanthus23_contig00008883
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00008883
(258 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, put... 94 2e-17
ref|XP_006376385.1| hypothetical protein POPTR_0013s12550g [Popu... 94 2e-17
ref|XP_002332533.1| predicted protein [Populus trichocarpa] 94 2e-17
ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vini... 89 8e-16
ref|XP_006360528.1| PREDICTED: 5' exonuclease Apollo-like [Solan... 86 4e-15
gb|EXB62332.1| hypothetical protein L484_022221 [Morus notabilis] 86 5e-15
ref|XP_006469809.1| PREDICTED: 5' exonuclease Apollo-like [Citru... 85 9e-15
ref|XP_006447425.1| hypothetical protein CICLE_v10015114mg [Citr... 85 9e-15
ref|XP_004243415.1| PREDICTED: 5' exonuclease Apollo-like [Solan... 84 2e-14
gb|EOX99254.1| DNA repair metallo-beta-lactamase family protein ... 82 7e-14
gb|EOX99253.1| DNA repair metallo-beta-lactamase family protein ... 82 7e-14
gb|EOX99252.1| DNA repair metallo-beta-lactamase family protein ... 82 7e-14
gb|EOX99251.1| DNA repair metallo-beta-lactamase family protein,... 82 7e-14
ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucum... 79 6e-13
ref|XP_006447423.1| hypothetical protein CICLE_v10018156mg, part... 78 1e-12
ref|XP_006408971.1| hypothetical protein EUTSA_v10001995mg [Eutr... 77 2e-12
gb|ESW04598.1| hypothetical protein PHAVU_011G109000g [Phaseolus... 76 4e-12
ref|XP_006833098.1| hypothetical protein AMTR_s00072p00037420 [A... 75 7e-12
ref|XP_003540866.1| PREDICTED: 5' exonuclease Apollo-like [Glyci... 74 2e-11
ref|XP_006305977.1| hypothetical protein CARUB_v10011240mg [Caps... 74 3e-11
>ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis] gi|223538070|gb|EEF39682.1| DNA cross-link
repair protein pso2/snm1, putative [Ricinus communis]
Length = 427
Score = 94.0 bits (232), Expect = 2e-17
Identities = 47/98 (47%), Positives = 59/98 (60%), Gaps = 13/98 (13%)
Frame = -3
Query: 256 GLPWAAKYCKTKGNIFGP-------------SPSTCSKKMTNGDLVFERYDEYTYSVPYS 116
GLPW K K N+FG + T + K+ ER +Y YSVPYS
Sbjct: 261 GLPWVVKPTKGDDNLFGSFLTSRYKNGKLSANGGTGTDKLNGSVQSVERLHQYIYSVPYS 320
Query: 115 DHSCFFEIKEFVELLQPSNIKGIVSSSECFIEPQYYFG 2
DHSCF EI+EF+EL+QP+++KGIVSSS C+I P YYFG
Sbjct: 321 DHSCFSEIQEFIELVQPTSMKGIVSSSSCYINPVYYFG 358
>ref|XP_006376385.1| hypothetical protein POPTR_0013s12550g [Populus trichocarpa]
gi|550325661|gb|ERP54182.1| hypothetical protein
POPTR_0013s12550g [Populus trichocarpa]
Length = 304
Score = 93.6 bits (231), Expect = 2e-17
Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 6/90 (6%)
Frame = -3
Query: 256 GLPWAAKYCKTKGNIFGPSPSTCSKKMT-----NGDLVF-ERYDEYTYSVPYSDHSCFFE 95
GLPW K K N+FG ++ KK +G+L + ERY +Y +SVPYS H CF E
Sbjct: 198 GLPWVLKPVKGDDNLFGSLLTSRYKKRQPSDKLDGNLAYAERYHQYMFSVPYSYHLCFAE 257
Query: 94 IKEFVELLQPSNIKGIVSSSECFIEPQYYF 5
I+EF+EL+QP+N+KGIVSSS C+++P YYF
Sbjct: 258 IQEFIELVQPANMKGIVSSSSCYVDPLYYF 287
>ref|XP_002332533.1| predicted protein [Populus trichocarpa]
Length = 360
Score = 93.6 bits (231), Expect = 2e-17
Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 6/90 (6%)
Frame = -3
Query: 256 GLPWAAKYCKTKGNIFGPSPSTCSKKMT-----NGDLVF-ERYDEYTYSVPYSDHSCFFE 95
GLPW K K N+FG ++ KK +G+L + ERY +Y +SVPYS H CF E
Sbjct: 254 GLPWVLKPVKGDDNLFGSLLTSRYKKRQPSDKLDGNLAYAERYHQYMFSVPYSYHLCFAE 313
Query: 94 IKEFVELLQPSNIKGIVSSSECFIEPQYYF 5
I+EF+EL+QP+N+KGIVSSS C+++P YYF
Sbjct: 314 IQEFIELVQPANMKGIVSSSSCYVDPLYYF 343
>ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vinifera]
gi|296081253|emb|CBI17997.3| unnamed protein product
[Vitis vinifera]
Length = 435
Score = 88.6 bits (218), Expect = 8e-16
Identities = 48/99 (48%), Positives = 61/99 (61%), Gaps = 14/99 (14%)
Frame = -3
Query: 256 GLPWAAKYCKTKGNIFGP---SPSTCSKKMTNGDLVFE-----------RYDEYTYSVPY 119
GLPW K + N GP S +K++ NG E R+ +Y YSVPY
Sbjct: 261 GLPWVVKPSEGNDNPAGPPSISHHCGNKRIINGGPRAEINKKGKLRSVVRFHQYIYSVPY 320
Query: 118 SDHSCFFEIKEFVELLQPSNIKGIVSSSECFIEPQYYFG 2
S+HSCF EI++F++L+QP NIKGIVSSS C+IEP YYFG
Sbjct: 321 SEHSCFPEIEDFIKLVQPINIKGIVSSSFCYIEPLYYFG 359
>ref|XP_006360528.1| PREDICTED: 5' exonuclease Apollo-like [Solanum tuberosum]
Length = 437
Score = 86.3 bits (212), Expect = 4e-15
Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 14/99 (14%)
Frame = -3
Query: 256 GLPWAAKYCKTKGNIFGPSP--------------STCSKKMTNGDLVFERYDEYTYSVPY 119
GLPWA K + + SP S+ S K G L R+D Y Y+VPY
Sbjct: 261 GLPWAPKAFRGMEKLSLESPPLLLHNRWHTGVTTSSTSSKTNGGSLSSGRHDHYIYTVPY 320
Query: 118 SDHSCFFEIKEFVELLQPSNIKGIVSSSECFIEPQYYFG 2
SDHSCF E+++FVE ++P NIKGIVSSS C ++P Y+FG
Sbjct: 321 SDHSCFPELQKFVEFVKPINIKGIVSSSACNVDPLYHFG 359
>gb|EXB62332.1| hypothetical protein L484_022221 [Morus notabilis]
Length = 437
Score = 85.9 bits (211), Expect = 5e-15
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 13/98 (13%)
Frame = -3
Query: 256 GLPWAAKYCKTKGNIFGP------SPSTCSKK------MTNGDL-VFERYDEYTYSVPYS 116
GLPW K + N+FG + S C++ +NG L ER+ +Y YSV YS
Sbjct: 261 GLPWVVKPSEGSDNLFGSLLTSRYNISKCTENGGARTYKSNGSLGSTERFHKYIYSVSYS 320
Query: 115 DHSCFFEIKEFVELLQPSNIKGIVSSSECFIEPQYYFG 2
DHS + EI+ F++L+QP+N+KGIVSSS C+++P YYFG
Sbjct: 321 DHSSYSEIENFIKLVQPANMKGIVSSSTCYVDPMYYFG 358
>ref|XP_006469809.1| PREDICTED: 5' exonuclease Apollo-like [Citrus sinensis]
Length = 435
Score = 85.1 bits (209), Expect = 9e-15
Identities = 42/96 (43%), Positives = 60/96 (62%), Gaps = 11/96 (11%)
Frame = -3
Query: 256 GLPWAAKYCKTKGNIFGP-----------SPSTCSKKMTNGDLVFERYDEYTYSVPYSDH 110
GLPW + K G++ G + T ++K+ +R+ + YSVPYSDH
Sbjct: 261 GLPWVVQPLKGGGSLPGSLFSSYQSKWRATSGTQTEKLKEALGSVDRFHKCIYSVPYSDH 320
Query: 109 SCFFEIKEFVELLQPSNIKGIVSSSECFIEPQYYFG 2
SCF EI++F+ L+QPSNI+GIVSSS C+++P YYFG
Sbjct: 321 SCFTEIEKFLNLVQPSNIRGIVSSSSCYVDPLYYFG 356
>ref|XP_006447425.1| hypothetical protein CICLE_v10015114mg [Citrus clementina]
gi|557550036|gb|ESR60665.1| hypothetical protein
CICLE_v10015114mg [Citrus clementina]
Length = 473
Score = 85.1 bits (209), Expect = 9e-15
Identities = 42/96 (43%), Positives = 60/96 (62%), Gaps = 11/96 (11%)
Frame = -3
Query: 256 GLPWAAKYCKTKGNIFGP-----------SPSTCSKKMTNGDLVFERYDEYTYSVPYSDH 110
GLPW + K G++ G + T ++K+ +R+ + YSVPYSDH
Sbjct: 261 GLPWVVQPLKGGGSLPGSLFSSYQSKWRATSGTQTEKLKEALGSVDRFHKCIYSVPYSDH 320
Query: 109 SCFFEIKEFVELLQPSNIKGIVSSSECFIEPQYYFG 2
SCF EI++F+ L+QPSNI+GIVSSS C+++P YYFG
Sbjct: 321 SCFTEIEKFLNLVQPSNIRGIVSSSSCYVDPLYYFG 356
>ref|XP_004243415.1| PREDICTED: 5' exonuclease Apollo-like [Solanum lycopersicum]
Length = 437
Score = 83.6 bits (205), Expect = 2e-14
Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 14/99 (14%)
Frame = -3
Query: 256 GLPWAAKYCKTKGNI--------------FGPSPSTCSKKMTNGDLVFERYDEYTYSVPY 119
GLPWA K + + G + S+ S K G L R+D Y Y+VPY
Sbjct: 261 GLPWAPKAFRGMEKLPLGSPPLLLHNRWHTGVTTSSTSSKTNGGSLSSGRHDHYIYTVPY 320
Query: 118 SDHSCFFEIKEFVELLQPSNIKGIVSSSECFIEPQYYFG 2
SDHSCF E+++F+E ++P NIK IVSSS C ++P Y+FG
Sbjct: 321 SDHSCFSELQKFIEFVKPINIKSIVSSSACNVDPLYHFG 359
>gb|EOX99254.1| DNA repair metallo-beta-lactamase family protein isoform 4
[Theobroma cacao]
Length = 368
Score = 82.0 bits (201), Expect = 7e-14
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 13/98 (13%)
Frame = -3
Query: 256 GLPWAAKYCKTKGNIFGP------SPSTCSKK------MTNGDL-VFERYDEYTYSVPYS 116
GLPW K + +FG + S S K +G+L +R+ +Y YSV YS
Sbjct: 192 GLPWVVKPIEGDDKLFGSLLVARYNRSKVSSKGGKQNDKMDGNLGSVKRFHKYIYSVQYS 251
Query: 115 DHSCFFEIKEFVELLQPSNIKGIVSSSECFIEPQYYFG 2
DHSC+ EI+EF++L+ P+N+KGIVSSS C+++P YYFG
Sbjct: 252 DHSCYQEIEEFIKLVHPANMKGIVSSSSCYVDPLYYFG 289
>gb|EOX99253.1| DNA repair metallo-beta-lactamase family protein isoform 3
[Theobroma cacao]
Length = 401
Score = 82.0 bits (201), Expect = 7e-14
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 13/98 (13%)
Frame = -3
Query: 256 GLPWAAKYCKTKGNIFGP------SPSTCSKK------MTNGDL-VFERYDEYTYSVPYS 116
GLPW K + +FG + S S K +G+L +R+ +Y YSV YS
Sbjct: 225 GLPWVVKPIEGDDKLFGSLLVARYNRSKVSSKGGKQNDKMDGNLGSVKRFHKYIYSVQYS 284
Query: 115 DHSCFFEIKEFVELLQPSNIKGIVSSSECFIEPQYYFG 2
DHSC+ EI+EF++L+ P+N+KGIVSSS C+++P YYFG
Sbjct: 285 DHSCYQEIEEFIKLVHPANMKGIVSSSSCYVDPLYYFG 322
>gb|EOX99252.1| DNA repair metallo-beta-lactamase family protein isoform 2
[Theobroma cacao]
Length = 435
Score = 82.0 bits (201), Expect = 7e-14
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 13/98 (13%)
Frame = -3
Query: 256 GLPWAAKYCKTKGNIFGP------SPSTCSKK------MTNGDL-VFERYDEYTYSVPYS 116
GLPW K + +FG + S S K +G+L +R+ +Y YSV YS
Sbjct: 259 GLPWVVKPIEGDDKLFGSLLVARYNRSKVSSKGGKQNDKMDGNLGSVKRFHKYIYSVQYS 318
Query: 115 DHSCFFEIKEFVELLQPSNIKGIVSSSECFIEPQYYFG 2
DHSC+ EI+EF++L+ P+N+KGIVSSS C+++P YYFG
Sbjct: 319 DHSCYQEIEEFIKLVHPANMKGIVSSSSCYVDPLYYFG 356
>gb|EOX99251.1| DNA repair metallo-beta-lactamase family protein, putative isoform
1 [Theobroma cacao]
Length = 437
Score = 82.0 bits (201), Expect = 7e-14
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 13/98 (13%)
Frame = -3
Query: 256 GLPWAAKYCKTKGNIFGP------SPSTCSKK------MTNGDL-VFERYDEYTYSVPYS 116
GLPW K + +FG + S S K +G+L +R+ +Y YSV YS
Sbjct: 261 GLPWVVKPIEGDDKLFGSLLVARYNRSKVSSKGGKQNDKMDGNLGSVKRFHKYIYSVQYS 320
Query: 115 DHSCFFEIKEFVELLQPSNIKGIVSSSECFIEPQYYFG 2
DHSC+ EI+EF++L+ P+N+KGIVSSS C+++P YYFG
Sbjct: 321 DHSCYQEIEEFIKLVHPANMKGIVSSSSCYVDPLYYFG 358
>ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
gi|449493187|ref|XP_004159216.1| PREDICTED: 5'
exonuclease Apollo-like [Cucumis sativus]
Length = 428
Score = 79.0 bits (193), Expect = 6e-13
Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 13/98 (13%)
Frame = -3
Query: 256 GLPWAAKYCKTKGNIFGPSPSTC---SKKMTNGDLVFERYD----------EYTYSVPYS 116
GLPW + + G G T SK NG + E+ +Y +SVPYS
Sbjct: 261 GLPWVVRPHEGDGIPSGSLLITRYRQSKLNENGPFLIEKQTGKVESVTKLHKYIFSVPYS 320
Query: 115 DHSCFFEIKEFVELLQPSNIKGIVSSSECFIEPQYYFG 2
DH+CF EI+EF++L+ P+ IKGIVSSS C+IEP YYFG
Sbjct: 321 DHACFSEIQEFIKLICPTTIKGIVSSSSCYIEPLYYFG 358
>ref|XP_006447423.1| hypothetical protein CICLE_v10018156mg, partial [Citrus clementina]
gi|557550034|gb|ESR60663.1| hypothetical protein
CICLE_v10018156mg, partial [Citrus clementina]
Length = 315
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/85 (47%), Positives = 51/85 (60%)
Frame = -3
Query: 256 GLPWAAKYCKTKGNIFGPSPSTCSKKMTNGDLVFERYDEYTYSVPYSDHSCFFEIKEFVE 77
GLPW K K GP+ + +R+ +Y YSVPYSD SCF I+EF+
Sbjct: 169 GLPWVVKPLKG-----GPALGSV-----------DRFRKYIYSVPYSDQSCFAGIEEFLN 212
Query: 76 LLQPSNIKGIVSSSECFIEPQYYFG 2
QPSNI+GIVSSS C+++P YYFG
Sbjct: 213 RAQPSNIRGIVSSSSCYVDPLYYFG 237
>ref|XP_006408971.1| hypothetical protein EUTSA_v10001995mg [Eutrema salsugineum]
gi|557110127|gb|ESQ50424.1| hypothetical protein
EUTSA_v10001995mg [Eutrema salsugineum]
Length = 420
Score = 77.4 bits (189), Expect = 2e-12
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Frame = -3
Query: 256 GLPWAAKYCK-------TKGNIFGPSPSTCSKKMTNGDLVFERYDEYTYSVPYSDHSCFF 98
GLPW + G++ S C K++ G ++ +Y YSV YSDHSC+
Sbjct: 259 GLPWLKRPSNGVGDGKLLSGSLLTASTLPCRKQLPAG---VHQFHDYMYSVHYSDHSCYE 315
Query: 97 EIKEFVELLQPSNIKGIVSSSECFIEPQYYFG 2
EI EFV L++P ++KGIV SS C++EP YYFG
Sbjct: 316 EIGEFVNLVKPKSMKGIVVSSACYVEPLYYFG 347
>gb|ESW04598.1| hypothetical protein PHAVU_011G109000g [Phaseolus vulgaris]
Length = 436
Score = 76.3 bits (186), Expect = 4e-12
Identities = 32/51 (62%), Positives = 43/51 (84%)
Frame = -3
Query: 154 ERYDEYTYSVPYSDHSCFFEIKEFVELLQPSNIKGIVSSSECFIEPQYYFG 2
E+ EY Y+VPYSDHS + EI+EF++L+QP+ +KGIV+SS C+IEP YYFG
Sbjct: 303 EKIHEYMYTVPYSDHSNYEEIEEFLKLVQPTRLKGIVASSSCYIEPMYYFG 353
>ref|XP_006833098.1| hypothetical protein AMTR_s00072p00037420 [Amborella trichopoda]
gi|548837749|gb|ERM98376.1| hypothetical protein
AMTR_s00072p00037420 [Amborella trichopoda]
Length = 427
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = -3
Query: 256 GLPWAAKYCKTKGNIFG---PSPSTCSKKMTNGDLVFERYDEYTYSVPYSDHSCFFEIKE 86
GLPW K K + + G PS S +M R +Y Y VPYS HSCF EI+E
Sbjct: 261 GLPWGLKAIKKQFSSLGCIPPSSPVNSSQMDETTSSVTRVHQYIYKVPYSLHSCFSEIQE 320
Query: 85 FVELLQPSNIKGIVSSSECFIEPQYYFG 2
F++L+QPS + G +SSS C++ P ++FG
Sbjct: 321 FIKLVQPSIMMGNLSSSFCYVNPNHFFG 348
>ref|XP_003540866.1| PREDICTED: 5' exonuclease Apollo-like [Glycine max]
Length = 437
Score = 74.3 bits (181), Expect = 2e-11
Identities = 31/51 (60%), Positives = 43/51 (84%)
Frame = -3
Query: 154 ERYDEYTYSVPYSDHSCFFEIKEFVELLQPSNIKGIVSSSECFIEPQYYFG 2
E+ +Y Y+VPYSDHS + EI++FV+L++P+ +KGIVSSS C+IEP YYFG
Sbjct: 303 EKIHKYIYTVPYSDHSNYEEIEDFVKLVKPTTLKGIVSSSSCYIEPMYYFG 353
>ref|XP_006305977.1| hypothetical protein CARUB_v10011240mg [Capsella rubella]
gi|482574688|gb|EOA38875.1| hypothetical protein
CARUB_v10011240mg [Capsella rubella]
Length = 422
Score = 73.6 bits (179), Expect = 3e-11
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Frame = -3
Query: 256 GLPWAAKYCKTKGNIFGPSPSTCSKKMTNGD------LVFERYDEYTYSVPYSDHSCFFE 95
GLPW + K G + G + K T ++++Y YSV YSDHSC+ E
Sbjct: 259 GLPWVKRPFKGVGKLSGSFLTASMKNETISAQKELQAAAVHKFNDYMYSVHYSDHSCYEE 318
Query: 94 IKEFVELLQPSNIKGIVSSSECFIEPQYYFG 2
I EF++L++P ++KGIV SS +++P YYFG
Sbjct: 319 IGEFIKLVKPKSMKGIVVSSSSYVDPLYYFG 349