BLASTX nr result
ID: Catharanthus23_contig00008569
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00008569
(900 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004508577.1| PREDICTED: general transcription factor IIE ... 53 8e-10
ref|XP_004299240.1| PREDICTED: general transcription factor IIE ... 55 1e-09
ref|XP_003633196.1| PREDICTED: general transcription factor IIE ... 54 1e-09
ref|XP_003524511.1| PREDICTED: general transcription factor IIE ... 52 2e-09
gb|EOX93215.1| General transcription factor IIE subunit 1 isofor... 54 3e-09
gb|EOX93214.1| General transcription factor IIE subunit 1 isofor... 54 3e-09
gb|EOX93216.1| General transcription factor IIE subunit 1 isofor... 54 3e-09
ref|XP_006341649.1| PREDICTED: general transcription factor IIE ... 56 4e-09
ref|XP_006341650.1| PREDICTED: general transcription factor IIE ... 56 4e-09
ref|XP_003527134.1| PREDICTED: general transcription factor IIE ... 50 4e-09
gb|ESW10335.1| hypothetical protein PHAVU_009G200700g [Phaseolus... 50 5e-09
gb|ESW27143.1| hypothetical protein PHAVU_003G177500g [Phaseolus... 52 9e-09
ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|5... 56 1e-08
gb|EXC28058.1| General transcription factor IIE subunit 1 [Morus... 52 1e-08
ref|XP_002322033.1| predicted protein [Populus trichocarpa] 56 1e-08
ref|XP_003552056.1| PREDICTED: general transcription factor IIE ... 49 1e-08
ref|XP_003549808.1| PREDICTED: general transcription factor IIE ... 49 2e-08
ref|XP_006600783.1| PREDICTED: general transcription factor IIE ... 49 2e-08
ref|XP_003629409.1| General transcription factor IIE subunit [Me... 49 4e-08
ref|XP_006602422.1| PREDICTED: general transcription factor IIE ... 48 4e-08
>ref|XP_004508577.1| PREDICTED: general transcription factor IIE subunit 1-like [Cicer
arietinum]
Length = 474
Score = 53.1 bits (126), Expect(2) = 8e-10
Identities = 28/40 (70%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKR 180
QIYDVV YRLH M+ KLK+EL+NKNTV Y C P CGKR
Sbjct: 130 QIYDVVRYRLHRMKHKLKDELENKNTVQEYIC--PNCGKR 167
Score = 37.4 bits (85), Expect(2) = 8e-10
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 115 VCVCFNYRYNALDALMLISM-DVCFHCEIFNAVLEVDRE 2
+C RYNALDAL LIS D FHCE N LE++ +
Sbjct: 160 ICPNCGKRYNALDALRLISFEDEDFHCERCNGKLEIESD 198
>ref|XP_004299240.1| PREDICTED: general transcription factor IIE subunit 1-like
[Fragaria vesca subsp. vesca]
Length = 451
Score = 55.1 bits (131), Expect(2) = 1e-09
Identities = 29/40 (72%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKR 180
QIYDVV YRLH MRKKLK+EL++KNTV Y C P CGKR
Sbjct: 132 QIYDVVRYRLHRMRKKLKDELEDKNTVQEYVC--PNCGKR 169
Score = 35.0 bits (79), Expect(2) = 1e-09
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 115 VCVCFNYRYNALDALMLISM-DVCFHCEIFNAVLEVDRE 2
VC RYNALDAL L+S+ D FHCE N L + +
Sbjct: 162 VCPNCGKRYNALDALQLLSLEDEYFHCESCNGELVAESD 200
>ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis
vinifera] gi|297735317|emb|CBI17757.3| unnamed protein
product [Vitis vinifera]
Length = 475
Score = 53.5 bits (127), Expect(2) = 1e-09
Identities = 28/40 (70%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKR 180
QIYDVV YRLH M+KKLK+EL++KNTV Y C P CGKR
Sbjct: 131 QIYDVVRYRLHRMKKKLKDELEDKNTVQEYIC--PNCGKR 168
Score = 36.2 bits (82), Expect(2) = 1e-09
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 115 VCVCFNYRYNALDALMLISM-DVCFHCEIFNAVLEVDRE 2
+C RYNALDAL LISM D FHCE N L + +
Sbjct: 161 ICPNCGKRYNALDALRLISMEDEYFHCESCNGELVAESD 199
>ref|XP_003524511.1| PREDICTED: general transcription factor IIE subunit 1-like [Glycine
max]
Length = 471
Score = 51.6 bits (122), Expect(2) = 2e-09
Identities = 26/40 (65%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKR 180
QIYDV+ YRLH M+ KLK+EL+NKNT+ Y C P CGKR
Sbjct: 131 QIYDVIRYRLHRMKHKLKDELENKNTLQEYIC--PNCGKR 168
Score = 37.4 bits (85), Expect(2) = 2e-09
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 115 VCVCFNYRYNALDALMLISM-DVCFHCEIFNAVLEVDRE 2
+C RYNALDAL L+S D FHCE N LEV+ +
Sbjct: 161 ICPNCGKRYNALDALRLVSFEDEDFHCESCNGRLEVESD 199
>gb|EOX93215.1| General transcription factor IIE subunit 1 isoform 2 [Theobroma
cacao]
Length = 480
Score = 53.9 bits (128), Expect(2) = 3e-09
Identities = 28/40 (70%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKR 180
QIYDVV YRLH M+KKLK+EL++KNTV Y C P CGKR
Sbjct: 132 QIYDVVRYRLHRMKKKLKDELEDKNTVQEYVC--PNCGKR 169
Score = 34.7 bits (78), Expect(2) = 3e-09
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 115 VCVCFNYRYNALDALMLISM-DVCFHCEIFNAVLEVDRE 2
VC RYNALDAL L+S+ D FHCE N L + +
Sbjct: 162 VCPNCGKRYNALDALRLVSLEDEYFHCERCNGELVAESD 200
>gb|EOX93214.1| General transcription factor IIE subunit 1 isoform 1 [Theobroma
cacao]
Length = 475
Score = 53.9 bits (128), Expect(2) = 3e-09
Identities = 28/40 (70%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKR 180
QIYDVV YRLH M+KKLK+EL++KNTV Y C P CGKR
Sbjct: 132 QIYDVVRYRLHRMKKKLKDELEDKNTVQEYVC--PNCGKR 169
Score = 34.7 bits (78), Expect(2) = 3e-09
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 115 VCVCFNYRYNALDALMLISM-DVCFHCEIFNAVLEVDRE 2
VC RYNALDAL L+S+ D FHCE N L + +
Sbjct: 162 VCPNCGKRYNALDALRLVSLEDEYFHCERCNGELVAESD 200
>gb|EOX93216.1| General transcription factor IIE subunit 1 isoform 3 [Theobroma
cacao]
Length = 473
Score = 53.9 bits (128), Expect(2) = 3e-09
Identities = 28/40 (70%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKR 180
QIYDVV YRLH M+KKLK+EL++KNTV Y C P CGKR
Sbjct: 132 QIYDVVRYRLHRMKKKLKDELEDKNTVQEYVC--PNCGKR 169
Score = 34.7 bits (78), Expect(2) = 3e-09
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 115 VCVCFNYRYNALDALMLISM-DVCFHCEIFNAVLEVDRE 2
VC RYNALDAL L+S+ D FHCE N L + +
Sbjct: 162 VCPNCGKRYNALDALRLVSLEDEYFHCERCNGELVAESD 200
>ref|XP_006341649.1| PREDICTED: general transcription factor IIE subunit 1-like isoform
X1 [Solanum tuberosum]
Length = 474
Score = 55.8 bits (133), Expect(2) = 4e-09
Identities = 29/40 (72%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKR 180
QIYDVV YRLH M+KKL++ELDNKNTV Y C P CGKR
Sbjct: 132 QIYDVVRYRLHRMKKKLRDELDNKNTVQEYIC--PNCGKR 169
Score = 32.3 bits (72), Expect(2) = 4e-09
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 115 VCVCFNYRYNALDALMLIS-MDVCFHCEIFNAVLEVDRE 2
+C RY ALDAL LIS +D FHCE N L + +
Sbjct: 162 ICPNCGKRYTALDALRLISPVDEYFHCESCNGELVAESD 200
>ref|XP_006341650.1| PREDICTED: general transcription factor IIE subunit 1-like isoform
X2 [Solanum tuberosum]
Length = 472
Score = 55.8 bits (133), Expect(2) = 4e-09
Identities = 29/40 (72%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKR 180
QIYDVV YRLH M+KKL++ELDNKNTV Y C P CGKR
Sbjct: 132 QIYDVVRYRLHRMKKKLRDELDNKNTVQEYIC--PNCGKR 169
Score = 32.3 bits (72), Expect(2) = 4e-09
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 115 VCVCFNYRYNALDALMLIS-MDVCFHCEIFNAVLEVDRE 2
+C RY ALDAL LIS +D FHCE N L + +
Sbjct: 162 ICPNCGKRYTALDALRLISPVDEYFHCESCNGELVAESD 200
>ref|XP_003527134.1| PREDICTED: general transcription factor IIE subunit 1-like [Glycine
max]
Length = 469
Score = 49.7 bits (117), Expect(2) = 4e-09
Identities = 26/40 (65%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKR 180
QIYDVV YR+H M+K LK+ELDNKNT+ Y C CGKR
Sbjct: 131 QIYDVVRYRIHRMKKLLKDELDNKNTIEEYIC--TKCGKR 168
Score = 38.5 bits (88), Expect(2) = 4e-09
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 115 VCVCFNYRYNALDALMLISM-DVCFHCEIFNAVLEVDRE 2
+C RYNALDAL L+S D FHCE N LEV+ +
Sbjct: 161 ICTKCGKRYNALDALRLVSFEDDDFHCESCNGKLEVEND 199
>gb|ESW10335.1| hypothetical protein PHAVU_009G200700g [Phaseolus vulgaris]
gi|561011429|gb|ESW10336.1| hypothetical protein
PHAVU_009G200700g [Phaseolus vulgaris]
Length = 471
Score = 49.7 bits (117), Expect(2) = 5e-09
Identities = 26/40 (65%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKR 180
QIYDVV YR+H M+K LK+ELDNKNT+ Y C CGKR
Sbjct: 131 QIYDVVRYRIHRMKKLLKDELDNKNTIEEYIC--TKCGKR 168
Score = 38.1 bits (87), Expect(2) = 5e-09
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 115 VCVCFNYRYNALDALMLISM-DVCFHCEIFNAVLEVDRE 2
+C RYNALDAL L+S D FHCE N LEV+ +
Sbjct: 161 ICTKCGKRYNALDALRLVSFEDDDFHCESCNGKLEVESD 199
>gb|ESW27143.1| hypothetical protein PHAVU_003G177500g [Phaseolus vulgaris]
Length = 473
Score = 51.6 bits (122), Expect(2) = 9e-09
Identities = 26/40 (65%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKR 180
QIYDV+ YRLH M+ KLK+EL+NKNT+ Y C P CGKR
Sbjct: 131 QIYDVIRYRLHRMKHKLKDELENKNTLQEYIC--PNCGKR 168
Score = 35.4 bits (80), Expect(2) = 9e-09
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -3
Query: 115 VCVCFNYRYNALDALMLISM-DVCFHCEIFNAVLEVD 8
+C RYNALDAL L+S D FHCE + LEV+
Sbjct: 161 ICPNCGKRYNALDALRLVSFEDEDFHCESCDGKLEVE 197
>ref|XP_002331723.1| predicted protein [Populus trichocarpa]
gi|566205569|ref|XP_006374149.1| transcription
initiation factor IIE alpha subunit family protein
[Populus trichocarpa] gi|550321822|gb|ERP51946.1|
transcription initiation factor IIE alpha subunit family
protein [Populus trichocarpa]
Length = 472
Score = 55.8 bits (133), Expect(2) = 1e-08
Identities = 29/40 (72%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKR 180
QIYDVV YRLH MRKKLK+EL++KNTV YTC P CG+R
Sbjct: 131 QIYDVVRYRLHRMRKKLKDELEDKNTVQEYTC--PNCGRR 168
Score = 30.8 bits (68), Expect(2) = 1e-08
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = -3
Query: 94 RYNALDALMLISM-DVCFHCE 35
RYNALDAL L+S+ D FHCE
Sbjct: 168 RYNALDALRLMSLVDEYFHCE 188
>gb|EXC28058.1| General transcription factor IIE subunit 1 [Morus notabilis]
Length = 406
Score = 52.0 bits (123), Expect(2) = 1e-08
Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKR 180
QIYDVV YRLH ++KKLK+EL++KNT+ Y C P CGKR
Sbjct: 61 QIYDVVRYRLHRLKKKLKDELEDKNTIQEYIC--PNCGKR 98
Score = 34.7 bits (78), Expect(2) = 1e-08
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 115 VCVCFNYRYNALDALMLISM-DVCFHCEIFNAVLEVDRE 2
+C RYNALDAL LIS+ D FHCE N L + +
Sbjct: 91 ICPNCGKRYNALDALRLISVEDEYFHCESCNGELVAESD 129
>ref|XP_002322033.1| predicted protein [Populus trichocarpa]
Length = 198
Score = 55.8 bits (133), Expect(2) = 1e-08
Identities = 29/40 (72%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKR 180
QIYDVV YRLH MRKKLK+EL++KNTV YTC P CG+R
Sbjct: 124 QIYDVVRYRLHRMRKKLKDELEDKNTVQEYTC--PNCGRR 161
Score = 30.8 bits (68), Expect(2) = 1e-08
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = -3
Query: 94 RYNALDALMLISM-DVCFHCE 35
RYNALDAL L+S+ D FHCE
Sbjct: 161 RYNALDALRLMSLVDEYFHCE 181
>ref|XP_003552056.1| PREDICTED: general transcription factor IIE subunit 1 isoform X1
[Glycine max]
Length = 469
Score = 49.3 bits (116), Expect(2) = 1e-08
Identities = 26/40 (65%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKR 180
QIYDVV YR+H M+K LK+ELDNKNT+ Y C CGKR
Sbjct: 131 QIYDVVRYRIHRMKKLLKDELDNKNTIEEYIC--RKCGKR 168
Score = 37.0 bits (84), Expect(2) = 1e-08
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 115 VCVCFNYRYNALDALMLISM-DVCFHCEIFNAVLEVDRE 2
+C RYNALDAL L+S D FHCE N LEV+ +
Sbjct: 161 ICRKCGKRYNALDALRLVSFEDDDFHCESCNGKLEVESD 199
>ref|XP_003549808.1| PREDICTED: general transcription factor IIE subunit 1-like isoform
X1 [Glycine max]
Length = 469
Score = 48.5 bits (114), Expect(2) = 2e-08
Identities = 25/40 (62%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKR 180
QIYDV+ YRLH M+ KLK+EL+NKNT+ Y C CGKR
Sbjct: 131 QIYDVIRYRLHRMKHKLKDELENKNTLQEYIC--SNCGKR 168
Score = 37.4 bits (85), Expect(2) = 2e-08
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 115 VCVCFNYRYNALDALMLISM-DVCFHCEIFNAVLEVDRE 2
+C RYNALDAL L+S D FHCE N LEV+ +
Sbjct: 161 ICSNCGKRYNALDALRLVSFEDEDFHCESCNGRLEVESD 199
>ref|XP_006600783.1| PREDICTED: general transcription factor IIE subunit 1-like isoform
X2 [Glycine max]
Length = 428
Score = 48.5 bits (114), Expect(2) = 2e-08
Identities = 25/40 (62%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKR 180
QIYDV+ YRLH M+ KLK+EL+NKNT+ Y C CGKR
Sbjct: 90 QIYDVIRYRLHRMKHKLKDELENKNTLQEYIC--SNCGKR 127
Score = 37.4 bits (85), Expect(2) = 2e-08
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 115 VCVCFNYRYNALDALMLISM-DVCFHCEIFNAVLEVDRE 2
+C RYNALDAL L+S D FHCE N LEV+ +
Sbjct: 120 ICSNCGKRYNALDALRLVSFEDEDFHCESCNGRLEVESD 158
>ref|XP_003629409.1| General transcription factor IIE subunit [Medicago truncatula]
gi|355523431|gb|AET03885.1| General transcription factor
IIE subunit [Medicago truncatula]
Length = 544
Score = 48.5 bits (114), Expect(2) = 4e-08
Identities = 30/63 (47%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKRLILFAAFI*CLVGLSTYFIL 120
QIYDVV YRLH M+ KLK+EL+NKNTV Y C L ++ F ++G YFI
Sbjct: 126 QIYDVVRYRLHHMKHKLKDELENKNTVQEYICTNYI----LFVWMYFCFIILGNFNYFIY 181
Query: 119 KSL 111
+L
Sbjct: 182 NAL 184
Score = 36.2 bits (82), Expect(2) = 4e-08
Identities = 22/36 (61%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = -3
Query: 103 FNYR-YNALDALMLISM-DVCFHCEIFNAVLEVDRE 2
FNY YNALDAL LIS D FHCE N LEV+ +
Sbjct: 176 FNYFIYNALDALRLISFEDEDFHCEHCNGKLEVESD 211
>ref|XP_006602422.1| PREDICTED: general transcription factor IIE subunit 1 isoform X2
[Glycine max]
Length = 454
Score = 47.8 bits (112), Expect(2) = 4e-08
Identities = 25/40 (62%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 QIYDVVCYRLHLMRKKLKNELDNKNTV-FYTCPTPTCGKR 180
+IYDVV YR+H M+K LK+ELDNKNT+ Y C CGKR
Sbjct: 116 KIYDVVRYRIHRMKKLLKDELDNKNTIEEYIC--RKCGKR 153
Score = 37.0 bits (84), Expect(2) = 4e-08
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 115 VCVCFNYRYNALDALMLISM-DVCFHCEIFNAVLEVDRE 2
+C RYNALDAL L+S D FHCE N LEV+ +
Sbjct: 146 ICRKCGKRYNALDALRLVSFEDDDFHCESCNGKLEVESD 184