BLASTX nr result

ID: Catharanthus23_contig00008522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00008522
         (1444 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004333678.1| ubiquitin thiolesterase [Acanthamoeba castel...    53   9e-06

>ref|XP_004333678.1| ubiquitin thiolesterase [Acanthamoeba castellanii str. Neff]
            gi|440790382|gb|ELR11665.1| ubiquitin thiolesterase
            [Acanthamoeba castellanii str. Neff]
          Length = 1978

 Score = 52.8 bits (125), Expect(2) = 9e-06
 Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
 Frame = +3

Query: 930  PSFILSPTPPPSQSVHLFNFPSSMHNPTPISPPLVSEDSQPFQT-SPLTAPTTLPHSLKS 1106
            PS   SPTP PS +    N PS  + P+P + P  S    P  T SP ++P+  P S  +
Sbjct: 1451 PSSTNSPTPSPSNTPSPSNTPSPSNTPSPSNTPSPSNTPSPSSTHSPTSSPSNTP-SPSN 1509

Query: 1107 LPALIGTSLGHNHPPPRSPKLSASPFPSAKSLPY-SDNGSPLNSGRNNQPSSLSLVRTPL 1283
             P+   T    N P   SP  + SP PS  + P  S+  SP N+   +   + S   TP 
Sbjct: 1510 TPSPSNTPSPSNTP---SPSSTNSPTPSPSNTPSPSNTPSPSNTPSPSNTPTPSPSNTPS 1566

Query: 1284 PAIYP 1298
            P+  P
Sbjct: 1567 PSNTP 1571



 Score = 25.0 bits (53), Expect(2) = 9e-06
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 1348 SNSPSTSAWYAPSPNSSGCSYP*P 1419
            SN+PS S+  +P+P+SS    P P
Sbjct: 1608 SNTPSPSSTSSPTPSSSNTPTPSP 1631


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