BLASTX nr result
ID: Catharanthus23_contig00008054
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00008054
(921 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containi... 125 2e-26
emb|CBI29931.3| unnamed protein product [Vitis vinifera] 125 2e-26
gb|EOY11208.1| Pentatricopeptide repeat (PPR) superfamily protei... 124 5e-26
gb|EOY11207.1| Pentatricopeptide repeat superfamily protein isof... 124 5e-26
ref|XP_004293058.1| PREDICTED: pentatricopeptide repeat-containi... 113 1e-22
ref|XP_002525440.1| pentatricopeptide repeat-containing protein,... 111 3e-22
gb|ESW23833.1| hypothetical protein PHAVU_004G079600g [Phaseolus... 99 2e-18
ref|XP_004485865.1| PREDICTED: pentatricopeptide repeat-containi... 97 6e-18
ref|XP_006479094.1| PREDICTED: pentatricopeptide repeat-containi... 97 8e-18
ref|XP_006443406.1| hypothetical protein CICLE_v10018850mg [Citr... 97 8e-18
gb|EXB68021.1| hypothetical protein L484_009628 [Morus notabilis] 97 1e-17
ref|NP_193101.2| pentatricopeptide repeat-containing protein [Ar... 96 1e-17
emb|CAB36829.1| putative protein [Arabidopsis thaliana] gi|72680... 96 1e-17
ref|XP_004233816.1| PREDICTED: pentatricopeptide repeat-containi... 96 2e-17
ref|XP_006347148.1| PREDICTED: pentatricopeptide repeat-containi... 94 7e-17
ref|XP_006574752.1| PREDICTED: pentatricopeptide repeat-containi... 92 4e-16
ref|XP_002868345.1| pentatricopeptide repeat-containing protein ... 92 4e-16
ref|XP_006282436.1| hypothetical protein CARUB_v10004043mg [Caps... 91 5e-16
ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 91 6e-16
ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containi... 91 6e-16
>ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 125 bits (314), Expect = 2e-26
Identities = 61/136 (44%), Positives = 88/136 (64%)
Frame = -3
Query: 409 RTYTDLIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDTYVSTDELVSVFRTLD 230
+TY L +G N+GS ++AKKLH +IFK GF ++ + S L+D Y++ E+ + + D
Sbjct: 11 QTYLWLFEGCF-NSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFD 69
Query: 229 DFACVNVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETFAGVLKACCASKVAFY 50
D NVS WNK+I+ L KK + VLGLFS+M+ EN+ PD TFA VL+AC K F
Sbjct: 70 DIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQ 129
Query: 49 YTEQVHAKVVRYGLSA 2
TEQ+HAK++ +G +
Sbjct: 130 VTEQIHAKIIHHGFGS 145
>emb|CBI29931.3| unnamed protein product [Vitis vinifera]
Length = 838
Score = 125 bits (314), Expect = 2e-26
Identities = 61/136 (44%), Positives = 88/136 (64%)
Frame = -3
Query: 409 RTYTDLIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDTYVSTDELVSVFRTLD 230
+TY L +G N+GS ++AKKLH +IFK GF ++ + S L+D Y++ E+ + + D
Sbjct: 11 QTYLWLFEGCF-NSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFD 69
Query: 229 DFACVNVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETFAGVLKACCASKVAFY 50
D NVS WNK+I+ L KK + VLGLFS+M+ EN+ PD TFA VL+AC K F
Sbjct: 70 DIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQ 129
Query: 49 YTEQVHAKVVRYGLSA 2
TEQ+HAK++ +G +
Sbjct: 130 VTEQIHAKIIHHGFGS 145
>gb|EOY11208.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
[Theobroma cacao]
Length = 1072
Score = 124 bits (311), Expect = 5e-26
Identities = 71/189 (37%), Positives = 107/189 (56%)
Frame = -3
Query: 577 RLNSAAFGNIAASEAFCDFEVEETVEDSTQSSSRILKATSSPRLAEHNEVSEGDYSRTYT 398
RL A F A S +F + +EE +S K S E+ V +T+
Sbjct: 48 RLRLACFNTNAISNSFDELSIEENEGNS--------KEVSFLYWMENRGVKANQ--QTFL 97
Query: 397 DLIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDTYVSTDELVSVFRTLDDFAC 218
L++G N+GS + KKLH KI K+GF K++ ++ L+D ++++ +L + DD
Sbjct: 98 WLLEGCL-NSGSIEQGKKLHGKILKMGFSKEHVLSEKLMDLHIASGDLDAAINVFDDMPK 156
Query: 217 VNVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETFAGVLKACCASKVAFYYTEQ 38
NV SWNK+I+ F+ KK N VL +S M+ EN+ P+ TFAG+LKAC S V F Y EQ
Sbjct: 157 RNVFSWNKMISGFISKKLTNKVLRFYSRMVVENVNPNERTFAGILKACSGSNVWFEYVEQ 216
Query: 37 VHAKVVRYG 11
+HA+++R+G
Sbjct: 217 IHARIIRHG 225
>gb|EOY11207.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao]
Length = 1389
Score = 124 bits (311), Expect = 5e-26
Identities = 71/189 (37%), Positives = 107/189 (56%)
Frame = -3
Query: 577 RLNSAAFGNIAASEAFCDFEVEETVEDSTQSSSRILKATSSPRLAEHNEVSEGDYSRTYT 398
RL A F A S +F + +EE +S K S E+ V +T+
Sbjct: 48 RLRLACFNTNAISNSFDELSIEENEGNS--------KEVSFLYWMENRGVKANQ--QTFL 97
Query: 397 DLIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDTYVSTDELVSVFRTLDDFAC 218
L++G N+GS + KKLH KI K+GF K++ ++ L+D ++++ +L + DD
Sbjct: 98 WLLEGCL-NSGSIEQGKKLHGKILKMGFSKEHVLSEKLMDLHIASGDLDAAINVFDDMPK 156
Query: 217 VNVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETFAGVLKACCASKVAFYYTEQ 38
NV SWNK+I+ F+ KK N VL +S M+ EN+ P+ TFAG+LKAC S V F Y EQ
Sbjct: 157 RNVFSWNKMISGFISKKLTNKVLRFYSRMVVENVNPNERTFAGILKACSGSNVWFEYVEQ 216
Query: 37 VHAKVVRYG 11
+HA+++R+G
Sbjct: 217 IHARIIRHG 225
>ref|XP_004293058.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Fragaria vesca subsp. vesca]
Length = 1277
Score = 113 bits (282), Expect = 1e-22
Identities = 56/136 (41%), Positives = 83/136 (61%)
Frame = -3
Query: 412 SRTYTDLIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDTYVSTDELVSVFRTL 233
S+TY L+ G ++GS +EA+ LH ++ KLGF D I++ V Y++ + S +
Sbjct: 298 SQTYIWLLKGCL-SSGSLLEARNLHSRVLKLGFGGDIEISNLFVGVYLANGDACSAVKVF 356
Query: 232 DDFACVNVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETFAGVLKACCASKVAF 53
DD ++ SWN +I FL KK VLG FS M+AEN+ PD TFAGVL+AC +
Sbjct: 357 DDLPYRSLFSWNNIIHGFLAKKLTGQVLGFFSQMMAENVYPDETTFAGVLRACGGGNASI 416
Query: 52 YYTEQVHAKVVRYGLS 5
Y EQ+HA+++R+G +
Sbjct: 417 QYVEQIHARIIRHGFA 432
>ref|XP_002525440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535253|gb|EEF36930.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 878
Score = 111 bits (278), Expect = 3e-22
Identities = 55/135 (40%), Positives = 86/135 (63%)
Frame = -3
Query: 412 SRTYTDLIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDTYVSTDELVSVFRTL 233
S+TY L+D F N+ S ++ KKLH KI K+GF K++ + L++ Y + +L SV +
Sbjct: 87 SQTYLWLLD-FCLNSASFLDCKKLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVVKVF 145
Query: 232 DDFACVNVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETFAGVLKACCASKVAF 53
DD ++ +WNK+++ + K+ N VLGLF+ M+ EN+ P+ T A VL+A + VAF
Sbjct: 146 DDMPSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPNEVTVASVLRAYGSGNVAF 205
Query: 52 YYTEQVHAKVVRYGL 8
YY EQ+HA ++ GL
Sbjct: 206 YYVEQIHASIISRGL 220
>gb|ESW23833.1| hypothetical protein PHAVU_004G079600g [Phaseolus vulgaris]
Length = 1052
Score = 99.0 bits (245), Expect = 2e-18
Identities = 68/208 (32%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Frame = -3
Query: 628 FSNSLLVGHFAKSFWLL--RLNSAAFGNIAASEAFCDFEVEETVEDSTQSSSRILKATSS 455
FSN+ F+ LL L AF N A S + +D S L
Sbjct: 27 FSNNFFPKPFSNDHKLLCQNLTFTAFSNTALSYNYSS-------DDGDASGIDFL----- 74
Query: 454 PRLAEHNEVSEGDYSRTYTDLIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDT 275
L E V S+TY L++G ++GS + KLH KI K+GF + + L+D
Sbjct: 75 -HLMEERGVRAN--SQTYLWLLEGCL-SSGSFSDGWKLHAKILKMGFCAEVVLCEHLMDL 130
Query: 274 YVSTDELVSVFRTLDDFACVNVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETF 95
Y++ +L + D+ A +S WNK++ F+ K HVLGLF M+ EN+ PD T+
Sbjct: 131 YIALGDLDGTIKMFDEMAVRPLSCWNKVMHWFVAGKMTGHVLGLFRRMVRENVKPDERTY 190
Query: 94 AGVLKACCASKVAFYYTEQVHAKVVRYG 11
VL+ C V FY EQ+HA+ + +G
Sbjct: 191 GAVLRGCGGGDVPFYCVEQIHARTISHG 218
>ref|XP_004485865.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cicer arietinum]
Length = 1071
Score = 97.4 bits (241), Expect = 6e-18
Identities = 62/188 (32%), Positives = 98/188 (52%)
Frame = -3
Query: 574 LNSAAFGNIAASEAFCDFEVEETVEDSTQSSSRILKATSSPRLAEHNEVSEGDYSRTYTD 395
L+ AAF N A + A E+ E + L L E V S+T+
Sbjct: 46 LSFAAFSNTALNYAHNYNELPEKENEVDAGGISFL------HLMEERGVRAN--SQTFLW 97
Query: 394 LIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDTYVSTDELVSVFRTLDDFACV 215
L++G N+GS + KLH KI K+GF+ + + L+D Y++ +L + + D+ +
Sbjct: 98 LLEGCL-NSGSFSDGWKLHGKILKMGFYAEVILCERLMDFYLAFGDLDNAVKMFDEMSVR 156
Query: 214 NVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETFAGVLKACCASKVAFYYTEQV 35
++S WNK++ F+ K V LF M+ EN+ PD +TFAGVL+ C + V F + EQ+
Sbjct: 157 SLSCWNKILHRFVADKLTGCVTRLFQRMMKENVEPDEKTFAGVLRGCSGTAVYFRFVEQI 216
Query: 34 HAKVVRYG 11
HAK + +G
Sbjct: 217 HAKTITHG 224
>ref|XP_006479094.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like isoform X1 [Citrus sinensis]
gi|568850820|ref|XP_006479095.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X2 [Citrus sinensis]
gi|568850822|ref|XP_006479096.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X3 [Citrus sinensis]
Length = 1077
Score = 97.1 bits (240), Expect = 8e-18
Identities = 52/135 (38%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
Frame = -3
Query: 412 SRTYTDLIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDTYVSTDELVSVFRTL 233
S+T+ L++G + GS +EAKK+H KI KLGF + + + + Y+++ +L S
Sbjct: 97 SQTFVWLLEGCL-SYGSLLEAKKIHGKILKLGFDGEQVLCDKIFNIYLASGDLDSAMNIF 155
Query: 232 DDFACVNVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETFAGVLKACCAS-KVA 56
DD + V SWNKLI+ F+ KK VLGLF M+ +++ P+ TF GVL+AC S VA
Sbjct: 156 DDMSKRTVFSWNKLISGFVSKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVA 215
Query: 55 FYYTEQVHAKVVRYG 11
Q+H ++ +G
Sbjct: 216 VQCVNQIHGLIISHG 230
>ref|XP_006443406.1| hypothetical protein CICLE_v10018850mg [Citrus clementina]
gi|557545668|gb|ESR56646.1| hypothetical protein
CICLE_v10018850mg [Citrus clementina]
Length = 840
Score = 97.1 bits (240), Expect = 8e-18
Identities = 52/135 (38%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
Frame = -3
Query: 412 SRTYTDLIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDTYVSTDELVSVFRTL 233
S+T+ L++G + GS +EAKK+H KI KLGF + + + + Y+++ +L S
Sbjct: 10 SQTFVWLLEGCL-SYGSLLEAKKIHGKILKLGFDGEQVLCDKIFNIYLASGDLDSAMNIF 68
Query: 232 DDFACVNVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETFAGVLKACCAS-KVA 56
DD + V SWNKLI+ F+ KK VLGLF M+ +++ P+ TF GVL+AC S VA
Sbjct: 69 DDMSKRTVFSWNKLISGFVSKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVA 128
Query: 55 FYYTEQVHAKVVRYG 11
Q+H ++ +G
Sbjct: 129 VQCVNQIHGLIISHG 143
>gb|EXB68021.1| hypothetical protein L484_009628 [Morus notabilis]
Length = 1033
Score = 96.7 bits (239), Expect = 1e-17
Identities = 52/137 (37%), Positives = 79/137 (57%)
Frame = -3
Query: 412 SRTYTDLIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDTYVSTDELVSVFRTL 233
S+TY L++ + S I KLH +I KLGF + + L++ Y++ +L S +
Sbjct: 60 SQTYLYLLEASLASR-SFIHVSKLHCRILKLGFDGEAPLLDKLMEVYIAFGDLDSAVKVF 118
Query: 232 DDFACVNVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETFAGVLKACCASKVAF 53
D+ +++SWN++I F+ HVLG + M+ EN P+ TFAGVLKAC + V
Sbjct: 119 DEMPERSLTSWNRIIHGFVASTLVAHVLGFYQKMVMENAHPNETTFAGVLKACASCNVDT 178
Query: 52 YYTEQVHAKVVRYGLSA 2
+ EQVHA++VR G SA
Sbjct: 179 RHVEQVHARIVRQGFSA 195
>ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g13650 gi|332657909|gb|AEE83309.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 96.3 bits (238), Expect = 1e-17
Identities = 47/129 (36%), Positives = 72/129 (55%)
Frame = -3
Query: 394 LIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDTYVSTDELVSVFRTLDDFACV 215
L++G K GS E +KLH +I KLG + ++ L D Y+ +L F+ D+
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149
Query: 214 NVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETFAGVLKACCASKVAFYYTEQV 35
+ +WNK+I + V GLF M++EN+ P+ TF+GVL+AC VAF EQ+
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQI 209
Query: 34 HAKVVRYGL 8
HA+++ GL
Sbjct: 210 HARILYQGL 218
>emb|CAB36829.1| putative protein [Arabidopsis thaliana] gi|7268069|emb|CAB78407.1|
putative protein [Arabidopsis thaliana]
Length = 1024
Score = 96.3 bits (238), Expect = 1e-17
Identities = 47/129 (36%), Positives = 72/129 (55%)
Frame = -3
Query: 394 LIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDTYVSTDELVSVFRTLDDFACV 215
L++G K GS E +KLH +I KLG + ++ L D Y+ +L F+ D+
Sbjct: 50 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 109
Query: 214 NVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETFAGVLKACCASKVAFYYTEQV 35
+ +WNK+I + V GLF M++EN+ P+ TF+GVL+AC VAF EQ+
Sbjct: 110 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQI 169
Query: 34 HAKVVRYGL 8
HA+++ GL
Sbjct: 170 HARILYQGL 178
>ref|XP_004233816.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Solanum lycopersicum]
Length = 1057
Score = 95.5 bits (236), Expect = 2e-17
Identities = 62/151 (41%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
Frame = -3
Query: 439 HNEVSE--GDYSRTY-TDLIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDTYV 269
H +V++ G + TY L+D GS I+AKKLH K+ LGF D I + +D YV
Sbjct: 62 HQQVAKDKGYFDHTYYLSLLDSCLSE-GSIIDAKKLHGKLLTLGFGADYRIGARFLDIYV 120
Query: 268 STDELVSVFRTLDDF--ACVNVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETF 95
+ +L S + D+ NVS WNKL++ F K + V LFS ML E++ PD TF
Sbjct: 121 AGGDLSSASQIFDNLPIGIRNVSCWNKLLSGFSRIKRNDEVFNLFSRMLGEDVNPDECTF 180
Query: 94 AGVLKACCASKVAFYY--TEQVHAKVVRYGL 8
+ VL+AC +K AF EQ+HA + RYGL
Sbjct: 181 SEVLQACSGNKAAFRIQGVEQIHALITRYGL 211
>ref|XP_006347148.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Solanum tuberosum]
Length = 1057
Score = 94.0 bits (232), Expect = 7e-17
Identities = 65/195 (33%), Positives = 99/195 (50%), Gaps = 4/195 (2%)
Frame = -3
Query: 580 LRLNSAAFGNIAASEAFCDFEVEETVEDSTQSSSRILKATSSPRLAEHNEVSEGDYSRTY 401
+RL + +F + A+ + ++D + + + RL + N + Y Y
Sbjct: 28 IRLKNCSFTSCASINSL-------VLDDCSDEENEYYPSIVHQRLVKDNGYFDHTY---Y 77
Query: 400 TDLIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDTYVSTDELVSVFRTLDDF- 224
L+D GS ++AKKL K+ LGF D I + +D YV+ +L S + D+
Sbjct: 78 LSLLDCCLSE-GSIVDAKKLQGKLLTLGFGDDYRIGARFLDIYVAGGDLSSALQIFDNLP 136
Query: 223 -ACVNVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETFAGVLKACCASKVAFYY 47
NVS WNKL++ F K + V LFS M+ E++ PD TF+ VL+AC +K AF +
Sbjct: 137 IGIRNVSCWNKLLSGFSRIKRNDEVFNLFSQMIREDVNPDECTFSEVLQACSDNKAAFRF 196
Query: 46 --TEQVHAKVVRYGL 8
EQ+HA V RYGL
Sbjct: 197 RGVEQIHALVTRYGL 211
>ref|XP_006574752.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like isoform X1 [Glycine max]
gi|571439084|ref|XP_006574753.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X2 [Glycine max]
gi|571439086|ref|XP_006574754.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X3 [Glycine max]
gi|571439088|ref|XP_006574755.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X4 [Glycine max]
gi|571439090|ref|XP_006574756.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X5 [Glycine max]
Length = 1082
Score = 91.7 bits (226), Expect = 4e-16
Identities = 61/188 (32%), Positives = 91/188 (48%)
Frame = -3
Query: 574 LNSAAFGNIAASEAFCDFEVEETVEDSTQSSSRILKATSSPRLAEHNEVSEGDYSRTYTD 395
L+ AAF N A S A+ + E E + L E V S+TY
Sbjct: 64 LSFAAFSNTALSYAYSNDEGEAN-------------GINFLHLMEERGVRAN--SQTYLW 108
Query: 394 LIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDTYVSTDELVSVFRTLDDFACV 215
L+DG ++G + KLH KI K+GF + + L+D Y++ +L D+
Sbjct: 109 LLDGCL-SSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVR 167
Query: 214 NVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETFAGVLKACCASKVAFYYTEQV 35
+S WNK++ F+ K VLGLF ML E + PD T+AGVL+ C V F+ E++
Sbjct: 168 PLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKI 227
Query: 34 HAKVVRYG 11
HA+ + +G
Sbjct: 228 HARTITHG 235
>ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297314181|gb|EFH44604.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1047
Score = 91.7 bits (226), Expect = 4e-16
Identities = 46/129 (35%), Positives = 71/129 (55%)
Frame = -3
Query: 394 LIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDTYVSTDELVSVFRTLDDFACV 215
L++G K GS E +KLH +I KLGF + ++ L+D Y+ +L + D+
Sbjct: 73 LLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPER 132
Query: 214 NVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETFAGVLKACCASKVAFYYTEQV 35
+ +WNK+I + V LF M+ EN+ P+ TF+GVL+AC VAF EQ+
Sbjct: 133 TIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQI 192
Query: 34 HAKVVRYGL 8
HA+++ GL
Sbjct: 193 HARIIYQGL 201
>ref|XP_006282436.1| hypothetical protein CARUB_v10004043mg [Capsella rubella]
gi|565439136|ref|XP_006282437.1| hypothetical protein
CARUB_v10004043mg [Capsella rubella]
gi|565439139|ref|XP_006282438.1| hypothetical protein
CARUB_v10004043mg [Capsella rubella]
gi|482551141|gb|EOA15334.1| hypothetical protein
CARUB_v10004043mg [Capsella rubella]
gi|482551142|gb|EOA15335.1| hypothetical protein
CARUB_v10004043mg [Capsella rubella]
gi|482551143|gb|EOA15336.1| hypothetical protein
CARUB_v10004043mg [Capsella rubella]
Length = 1050
Score = 91.3 bits (225), Expect = 5e-16
Identities = 47/134 (35%), Positives = 72/134 (53%)
Frame = -3
Query: 409 RTYTDLIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDTYVSTDELVSVFRTLD 230
+T T L++G K GS E +KLH +I KLGF D ++ L+ Y+ +L + D
Sbjct: 71 QTLTWLLEGCLKTNGSLEEGRKLHSQILKLGFDNDACLSEKLLAFYLFKGDLDGALKVFD 130
Query: 229 DFACVNVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETFAGVLKACCASKVAFY 50
+ + +WNK+I + V G F M+ EN+ P+ TF GVL+AC + V F
Sbjct: 131 EMPERTIFTWNKMIKELAFRNLSGKVFGFFGRMVDENVTPNEGTFTGVLEACRGASVDFD 190
Query: 49 YTEQVHAKVVRYGL 8
EQ+HA+++ GL
Sbjct: 191 VVEQIHARIIYQGL 204
>ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 90.9 bits (224), Expect = 6e-16
Identities = 52/136 (38%), Positives = 74/136 (54%)
Frame = -3
Query: 409 RTYTDLIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDTYVSTDELVSVFRTLD 230
+ Y L++G +GS E +LH +I K GF + + LVD Y + + D
Sbjct: 59 QNYLWLLEGCL-TSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFD 117
Query: 229 DFACVNVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETFAGVLKACCASKVAFY 50
+ + +V SWNK+I F+ +KS V LF MLAE I P+ TFAGVLKAC +AF
Sbjct: 118 ENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFN 177
Query: 49 YTEQVHAKVVRYGLSA 2
Y +QVH++ YG +
Sbjct: 178 YVKQVHSRTFYYGFDS 193
>ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 90.9 bits (224), Expect = 6e-16
Identities = 52/136 (38%), Positives = 74/136 (54%)
Frame = -3
Query: 409 RTYTDLIDGFQKNTGSSIEAKKLHRKIFKLGFHKDNAITSWLVDTYVSTDELVSVFRTLD 230
+ Y L++G +GS E +LH +I K GF + + LVD Y + + D
Sbjct: 59 QNYLWLLEGCL-TSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFD 117
Query: 229 DFACVNVSSWNKLITAFLGKKSYNHVLGLFSIMLAENICPDPETFAGVLKACCASKVAFY 50
+ + +V SWNK+I F+ +KS V LF MLAE I P+ TFAGVLKAC +AF
Sbjct: 118 ENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFN 177
Query: 49 YTEQVHAKVVRYGLSA 2
Y +QVH++ YG +
Sbjct: 178 YVKQVHSRTFYYGFDS 193