BLASTX nr result

ID: Catharanthus23_contig00008029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00008029
         (226 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521772.1| conserved hypothetical protein [Ricinus comm...    68   1e-09
ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vit...    58   2e-06

>ref|XP_002521772.1| conserved hypothetical protein [Ricinus communis]
           gi|223538985|gb|EEF40582.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 413

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 37/74 (50%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
 Frame = -3

Query: 221 GEGWTKEFSINEGIVYGMWALCCSRISSEIIFK-DNYGQLYAYDCGLQLMRKVEKNQVKF 45
           G+ WTK++SI  G +  M  +C  RI  E+IFK D  G  Y+YDC L+ MRKVE ++ K 
Sbjct: 330 GDVWTKQYSITRGSIIDMVPICSLRIGGELIFKRDEDGSFYSYDCRLKEMRKVEMDK-KC 388

Query: 44  LYDHHFLLPHVNSL 3
           L  H   LPHVNSL
Sbjct: 389 LPFHGTYLPHVNSL 402


>ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vitis vinifera]
          Length = 417

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = -3

Query: 221 GEGWTKEFSINEGIVYGMWALCCSRISSEIIFK-DNYGQLYAYDCGLQLMRKVEKNQVKF 45
           GEGWTK+  I  G +  M  L   R + E++FK D  G LYAYD  LQ+MRK++      
Sbjct: 334 GEGWTKQHCITTGCILDMVPLFSMRTTEEMVFKRDEDGSLYAYDFQLQVMRKIDMETP-- 391

Query: 44  LYDHHFLLPHVNSL 3
           L D +  LPHVNSL
Sbjct: 392 LSDCY--LPHVNSL 403


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