BLASTX nr result
ID: Catharanthus23_contig00006203
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00006203
(559 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum] 100 4e-19
gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum] 100 4e-19
ref|XP_006338944.1| PREDICTED: histone deacetylase HDT1-like [So... 99 7e-19
ref|XP_004249622.1| PREDICTED: histone deacetylase HDT1-like [So... 99 7e-19
gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum] 97 2e-18
gb|EOY08110.1| Histone deacetylase 2C, putative [Theobroma cacao] 80 3e-13
ref|XP_004246566.1| PREDICTED: histone deacetylase HDT1-like [So... 80 4e-13
ref|XP_006381322.1| hypothetical protein POPTR_0006s11770g [Popu... 79 6e-13
ref|XP_002326411.1| histone deacetylase [Populus trichocarpa] 79 6e-13
gb|ABK93977.1| unknown [Populus trichocarpa] 79 6e-13
ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vi... 79 8e-13
emb|CBI17088.3| unnamed protein product [Vitis vinifera] 79 8e-13
gb|EMJ03580.1| hypothetical protein PRUPE_ppa009356mg [Prunus pe... 78 1e-12
gb|EMJ03579.1| hypothetical protein PRUPE_ppa009356mg [Prunus pe... 78 1e-12
ref|XP_004137868.1| PREDICTED: uncharacterized protein LOC101207... 78 2e-12
ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vi... 78 2e-12
emb|CBI29370.3| unnamed protein product [Vitis vinifera] 77 2e-12
emb|CBI30241.3| unnamed protein product [Vitis vinifera] 77 4e-12
ref|XP_006341171.1| PREDICTED: histone deacetylase HDT1-like [So... 76 6e-12
gb|AAW57802.1| putative histone deacetylase HD2 [Oryza sativa Ja... 76 6e-12
>gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]
Length = 294
Score = 99.8 bits (247), Expect = 4e-19
Identities = 46/58 (79%), Positives = 51/58 (87%)
Frame = +1
Query: 7 TPQKTDLKKGGVHIATPHPSKQAGKTPGNKNQQTPKSGGGSHTCKSCSRSFGSENALE 180
TPQKTD KKG H+ATPHPSKQAGK+P NKNQQTPKS GG+H CK+C+R FGSENALE
Sbjct: 227 TPQKTDGKKGSGHVATPHPSKQAGKSPANKNQQTPKS-GGAHLCKTCNRGFGSENALE 283
>gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]
Length = 295
Score = 99.8 bits (247), Expect = 4e-19
Identities = 46/58 (79%), Positives = 51/58 (87%)
Frame = +1
Query: 7 TPQKTDLKKGGVHIATPHPSKQAGKTPGNKNQQTPKSGGGSHTCKSCSRSFGSENALE 180
TPQKTD KKG H+ATPHPSKQAGK+P NKNQQTPKS GG+H CK+C+R FGSENALE
Sbjct: 228 TPQKTDGKKGSGHVATPHPSKQAGKSPANKNQQTPKS-GGAHLCKTCNRGFGSENALE 284
>ref|XP_006338944.1| PREDICTED: histone deacetylase HDT1-like [Solanum tuberosum]
Length = 287
Score = 99.0 bits (245), Expect = 7e-19
Identities = 47/58 (81%), Positives = 51/58 (87%)
Frame = +1
Query: 7 TPQKTDLKKGGVHIATPHPSKQAGKTPGNKNQQTPKSGGGSHTCKSCSRSFGSENALE 180
TPQKTD KKG VH+ATPHPSKQAGKTPGNK QTPKS GGS CK+C+R+FGSENALE
Sbjct: 220 TPQKTDGKKGAVHVATPHPSKQAGKTPGNKPNQTPKS-GGSLACKTCNRTFGSENALE 276
>ref|XP_004249622.1| PREDICTED: histone deacetylase HDT1-like [Solanum lycopersicum]
Length = 287
Score = 99.0 bits (245), Expect = 7e-19
Identities = 47/58 (81%), Positives = 51/58 (87%)
Frame = +1
Query: 7 TPQKTDLKKGGVHIATPHPSKQAGKTPGNKNQQTPKSGGGSHTCKSCSRSFGSENALE 180
TPQKTD KKG VH+ATPHPSKQAGKTPGNK QTPKS GGS CK+C+R+FGSENALE
Sbjct: 220 TPQKTDGKKGAVHVATPHPSKQAGKTPGNKPNQTPKS-GGSLACKTCNRTFGSENALE 276
>gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
Length = 282
Score = 97.4 bits (241), Expect = 2e-18
Identities = 47/59 (79%), Positives = 51/59 (86%)
Frame = +1
Query: 4 ATPQKTDLKKGGVHIATPHPSKQAGKTPGNKNQQTPKSGGGSHTCKSCSRSFGSENALE 180
ATPQKTD KKG VH+ATPHPSKQAGKT GNK+ QTPKS GGS CK+CSR+FGSE ALE
Sbjct: 214 ATPQKTDGKKGAVHVATPHPSKQAGKTSGNKSNQTPKS-GGSLACKTCSRTFGSETALE 271
>gb|EOY08110.1| Histone deacetylase 2C, putative [Theobroma cacao]
Length = 302
Score = 80.5 bits (197), Expect = 3e-13
Identities = 41/62 (66%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Frame = +1
Query: 1 VATPQKTDLKKGGVHIATPHPSKQAGKTPGNKNQ--QTPKSGGGSHTCKSCSRSFGSENA 174
+ TPQKTD KK G H ATPHPSKQAGK Q Q PK GG S CKSC RSFGSENA
Sbjct: 230 LVTPQKTDGKKVGGHTATPHPSKQAGKASAATGQVKQNPKLGGSSFPCKSCGRSFGSENA 289
Query: 175 LE 180
L+
Sbjct: 290 LQ 291
>ref|XP_004246566.1| PREDICTED: histone deacetylase HDT1-like [Solanum lycopersicum]
Length = 269
Score = 79.7 bits (195), Expect = 4e-13
Identities = 39/60 (65%), Positives = 42/60 (70%)
Frame = +1
Query: 1 VATPQKTDLKKGGVHIATPHPSKQAGKTPGNKNQQTPKSGGGSHTCKSCSRSFGSENALE 180
+ TPQKTD KKGGVH+ATPHPSKQA KTP GSH CK C+RSFGSE ALE
Sbjct: 208 LTTPQKTDGKKGGVHVATPHPSKQASKTP---------KSAGSHHCKPCNRSFGSEGALE 258
>ref|XP_006381322.1| hypothetical protein POPTR_0006s11770g [Populus trichocarpa]
gi|550336024|gb|ERP59119.1| hypothetical protein
POPTR_0006s11770g [Populus trichocarpa]
Length = 305
Score = 79.3 bits (194), Expect = 6e-13
Identities = 39/58 (67%), Positives = 44/58 (75%)
Frame = +1
Query: 7 TPQKTDLKKGGVHIATPHPSKQAGKTPGNKNQQTPKSGGGSHTCKSCSRSFGSENALE 180
TPQKTDLKK GVHIATPHPSKQA KT + N Q + S +C SC+RSFGSENAL+
Sbjct: 240 TPQKTDLKKAGVHIATPHPSKQAAKT--SANSQRKEQAQKSFSCNSCNRSFGSENALQ 295
>ref|XP_002326411.1| histone deacetylase [Populus trichocarpa]
Length = 271
Score = 79.3 bits (194), Expect = 6e-13
Identities = 39/58 (67%), Positives = 44/58 (75%)
Frame = +1
Query: 7 TPQKTDLKKGGVHIATPHPSKQAGKTPGNKNQQTPKSGGGSHTCKSCSRSFGSENALE 180
TPQKTDLKK GVHIATPHPSKQA KT + N Q + S +C SC+RSFGSENAL+
Sbjct: 206 TPQKTDLKKAGVHIATPHPSKQAAKT--SANSQRKEQAQKSFSCNSCNRSFGSENALQ 261
>gb|ABK93977.1| unknown [Populus trichocarpa]
Length = 305
Score = 79.3 bits (194), Expect = 6e-13
Identities = 39/58 (67%), Positives = 44/58 (75%)
Frame = +1
Query: 7 TPQKTDLKKGGVHIATPHPSKQAGKTPGNKNQQTPKSGGGSHTCKSCSRSFGSENALE 180
TPQKTDLKK GVHIATPHPSKQA KT + N Q + S +C SC+RSFGSENAL+
Sbjct: 240 TPQKTDLKKAGVHIATPHPSKQAAKT--SANSQRKEQAQKSFSCNSCNRSFGSENALQ 295
>ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
Length = 300
Score = 79.0 bits (193), Expect = 8e-13
Identities = 40/63 (63%), Positives = 51/63 (80%), Gaps = 3/63 (4%)
Frame = +1
Query: 1 VATPQKTDLKKGGVHIATPHPSKQAGKTP--GNKNQ-QTPKSGGGSHTCKSCSRSFGSEN 171
+ +PQKTD KKGG H ATPHP+K+AGKTP G+K + Q+PKS GG +CKSCS++F SEN
Sbjct: 229 LVSPQKTDGKKGGAHTATPHPNKKAGKTPASGDKGKGQSPKS-GGQVSCKSCSKTFNSEN 287
Query: 172 ALE 180
AL+
Sbjct: 288 ALQ 290
>emb|CBI17088.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 79.0 bits (193), Expect = 8e-13
Identities = 40/63 (63%), Positives = 51/63 (80%), Gaps = 3/63 (4%)
Frame = +1
Query: 1 VATPQKTDLKKGGVHIATPHPSKQAGKTP--GNKNQ-QTPKSGGGSHTCKSCSRSFGSEN 171
+ +PQKTD KKGG H ATPHP+K+AGKTP G+K + Q+PKS GG +CKSCS++F SEN
Sbjct: 282 LVSPQKTDGKKGGAHTATPHPNKKAGKTPASGDKGKGQSPKS-GGQVSCKSCSKTFNSEN 340
Query: 172 ALE 180
AL+
Sbjct: 341 ALQ 343
>gb|EMJ03580.1| hypothetical protein PRUPE_ppa009356mg [Prunus persica]
Length = 296
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/61 (62%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Frame = +1
Query: 7 TPQKTDLKKGGVHIATPHPSKQAGKTPGNKN---QQTPKSGGGSHTCKSCSRSFGSENAL 177
TP+KTD KKG VHIATPHP+KQAGK P + QQ PKS GG+ C+SC+RSF S+ AL
Sbjct: 226 TPEKTDSKKGSVHIATPHPAKQAGKKPATSDQSKQQAPKS-GGTFNCQSCNRSFNSDGAL 284
Query: 178 E 180
+
Sbjct: 285 Q 285
>gb|EMJ03579.1| hypothetical protein PRUPE_ppa009356mg [Prunus persica]
Length = 290
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/61 (62%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Frame = +1
Query: 7 TPQKTDLKKGGVHIATPHPSKQAGKTPGNKN---QQTPKSGGGSHTCKSCSRSFGSENAL 177
TP+KTD KKG VHIATPHP+KQAGK P + QQ PKS GG+ C+SC+RSF S+ AL
Sbjct: 220 TPEKTDSKKGSVHIATPHPAKQAGKKPATSDQSKQQAPKS-GGTFNCQSCNRSFNSDGAL 278
Query: 178 E 180
+
Sbjct: 279 Q 279
>ref|XP_004137868.1| PREDICTED: uncharacterized protein LOC101207572 [Cucumis sativus]
gi|449500996|ref|XP_004161249.1| PREDICTED:
uncharacterized protein LOC101226213 [Cucumis sativus]
Length = 318
Score = 77.8 bits (190), Expect = 2e-12
Identities = 38/63 (60%), Positives = 48/63 (76%), Gaps = 3/63 (4%)
Frame = +1
Query: 1 VATPQKTDLKKGGVHIATPHPSKQAGK--TPGNKN-QQTPKSGGGSHTCKSCSRSFGSEN 171
+ TPQKTD KKG H+ATPHPSK+AGK +KN QQTPKS + +CK+C+R+FGSE
Sbjct: 245 LVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTCNRTFGSET 304
Query: 172 ALE 180
AL+
Sbjct: 305 ALQ 307
>ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
Length = 307
Score = 77.8 bits (190), Expect = 2e-12
Identities = 40/62 (64%), Positives = 47/62 (75%), Gaps = 4/62 (6%)
Frame = +1
Query: 7 TPQKT--DLKKGGVHIATPHPSKQAGKTPGN--KNQQTPKSGGGSHTCKSCSRSFGSENA 174
TPQKT D KK G H+ATP+PSKQAGKTP N K +Q + GGS +CKSC+RSF SENA
Sbjct: 235 TPQKTGDDDKKSGGHVATPYPSKQAGKTPANTEKPKQQVQKSGGSFSCKSCNRSFNSENA 294
Query: 175 LE 180
L+
Sbjct: 295 LQ 296
>emb|CBI29370.3| unnamed protein product [Vitis vinifera]
Length = 110
Score = 77.4 bits (189), Expect = 2e-12
Identities = 35/62 (56%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Frame = +1
Query: 1 VATPQKTDLKKGGVHIATPHPSKQAGKTP--GNKNQQTPKSGGGSHTCKSCSRSFGSENA 174
+ +PQ TD KKGG H ATPHP+K+AGKTP G+K ++ GG +CKSCS++F SENA
Sbjct: 39 LVSPQNTDGKKGGAHTATPHPNKKAGKTPATGDKGKEQSPKSGGQVSCKSCSKTFNSENA 98
Query: 175 LE 180
L+
Sbjct: 99 LQ 100
>emb|CBI30241.3| unnamed protein product [Vitis vinifera]
Length = 149
Score = 76.6 bits (187), Expect = 4e-12
Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 7/65 (10%)
Frame = +1
Query: 7 TPQKTDLKKG-----GVHIATPHPSKQAGKTPGN--KNQQTPKSGGGSHTCKSCSRSFGS 165
TPQKTD KK G H+ATP+PSKQAGKTP N K +Q + GGS +CKSC+RSF S
Sbjct: 74 TPQKTDGKKSDDKKSGGHVATPYPSKQAGKTPANTEKPKQQVQKSGGSFSCKSCNRSFNS 133
Query: 166 ENALE 180
ENAL+
Sbjct: 134 ENALQ 138
>ref|XP_006341171.1| PREDICTED: histone deacetylase HDT1-like [Solanum tuberosum]
Length = 269
Score = 75.9 bits (185), Expect = 6e-12
Identities = 37/60 (61%), Positives = 41/60 (68%)
Frame = +1
Query: 1 VATPQKTDLKKGGVHIATPHPSKQAGKTPGNKNQQTPKSGGGSHTCKSCSRSFGSENALE 180
+ TPQKTD KKGG H+ATPHPSKQA KTP GSH CK C+RSFGSE AL+
Sbjct: 208 LTTPQKTDGKKGGGHVATPHPSKQASKTP---------KSAGSHHCKPCNRSFGSEGALD 258
>gb|AAW57802.1| putative histone deacetylase HD2 [Oryza sativa Japonica Group]
Length = 274
Score = 75.9 bits (185), Expect = 6e-12
Identities = 40/64 (62%), Positives = 50/64 (78%), Gaps = 4/64 (6%)
Frame = +1
Query: 1 VATP--QKTDLKKGGVHIATPHPSKQAGKTPGN--KNQQTPKSGGGSHTCKSCSRSFGSE 168
+ATP QKT KKG VH+ATPHP+KQA KTP N +++PKSGGGS +CKSCS++F SE
Sbjct: 202 IATPSGQKTGDKKG-VHVATPHPAKQASKTPVNDKSKEKSPKSGGGSISCKSCSKTFNSE 260
Query: 169 NALE 180
AL+
Sbjct: 261 MALQ 264