BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00006048
         (2623 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g...   692   0.0  
ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g...   686   0.0  
emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]   681   0.0  
ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citr...   678   0.0  
ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g...   677   0.0  
ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g...   673   0.0  
gb|EOY04202.1| RNA-binding KH domain-containing protein isoform ...   630   e-178
gb|EOY04205.1| RNA-binding KH domain-containing protein isoform ...   628   e-177
ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citr...   611   e-172
ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g...   607   e-171
gb|EMJ18848.1| hypothetical protein PRUPE_ppa027198mg, partial [...   596   e-167
ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus ...   582   e-163
gb|EOY04206.1| RNA-binding KH domain-containing protein isoform ...   577   e-162
gb|EOY04203.1| RNA-binding KH domain-containing protein isoform ...   575   e-161
ref|XP_002329331.1| predicted protein [Populus trichocarpa] gi|5...   559   e-156
gb|AEV43362.1| poly C-binding protein [Citrus sinensis]               530   e-147
gb|EOY04207.1| RNA-binding KH domain-containing protein isoform ...   439   e-120
ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g...   386   e-104
gb|AAP54423.2| KH domain containing protein, expressed [Oryza sa...   381   e-102
ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group] g...   381   e-102

>ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
            vinifera] gi|296087281|emb|CBI33655.3| unnamed protein
            product [Vitis vinifera]
          Length = 676

 Score =  692 bits (1785), Expect = 0.0
 Identities = 392/686 (57%), Positives = 467/686 (68%), Gaps = 16/686 (2%)
 Frame = -1

Query: 2371 MEDSRKFFLKKRPNPQFDAKGGIKRGKWQNSSLEQSLEDSRTPETVYRILCQSXXXXXXX 2192
            ME +R+   KKRPN QF  KG  KRG+W NSS EQS  +S+  +TVYRILC S       
Sbjct: 1    MEGTRRGSFKKRPNFQFKRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVI 60

Query: 2191 XXXXXXXKALREETQAKITVADPVPGSDDRVIVILSPSTKSARRKTIDNAEDNQDNKEDN 2012
                   KALREETQAKITVAD VPGSD+RVI+I S  TK+ +     N +   + ++D+
Sbjct: 61   GKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHD-SNEDPEMEEEQDH 119

Query: 2011 IVMELHCAAQDALLKVHDRIVEEDI-GGAESYSENE-IVVTARLLVPNNMVGCLLGKKGD 1838
              ME HC AQDAL+KVH+RI+EED+ GG E   +NE  VVTARLLVPNNMVGCLLGK+GD
Sbjct: 120  --MEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGD 177

Query: 1837 VIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEVSTLLHRNPRKDK 1658
            VIQRLRSET ANIRVLPA+HLP+CA+SSDELVQISGKP + KKALYEVSTLLH+NPRKDK
Sbjct: 178  VIQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDK 237

Query: 1657 PPLSFPLAHGTQNFHPPGPPTANMLPQGSSAWSRHNPNEQG-RTKPWAERFRNEPSGFGP 1481
            PP SFP++ G Q FHPPG    NM P G+  WS  N N QG    PW   +R++PS   P
Sbjct: 238  PPSSFPMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMGGYRSQPSVV-P 296

Query: 1480 AEFDGFPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVENVSPES 1301
              FDG     GGEA  EFS+KILCP+ KIGGVIGKGGFNV+QLQQETGASI VE+   ES
Sbjct: 297  GGFDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAES 356

Query: 1300 DDRVIRASSIEALWDPRSQTIEAILHLQNKTSELNEKGIITTRLLVPSNKVGCILGQGGH 1121
            ++RVIR SS EALW+PRSQTIEAIL LQNKTSE ++KG +TTRLLVPS+KVGCILGQGGH
Sbjct: 357  EERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKGGMTTRLLVPSSKVGCILGQGGH 416

Query: 1120 VINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVAKDALAEIASRLRMRCLRDA 941
            VINEMRRRTQADIRV+SKEDKPKCASDDEELVQISGN+ VAKDALAEIASRLR+RCLRDA
Sbjct: 417  VINEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLRVRCLRDA 476

Query: 940  SSKGEPAPTRSXXXXXXXXXXXXXXXXXXGATGVGSLGRYDHYKDXXXXXXXXXXXXXPT 761
            +   EPAP                     GA G GS G ++  K              P 
Sbjct: 477  NGGVEPAPVGPVPGFGHPGKLPGGLPSSSGALGAGSSGGFELSKGGGLEYEPQSYPVPPA 536

Query: 760  AIGYPGVNG--DRRIRNDIADSI---GGAGASNMSEIMGTRLKLHGHHAAGSEHLVDIRR 596
            A GY  VN   + +I N+   S+   GG   +NMSE+ G R+KL    + GSE +V+IR 
Sbjct: 537  ATGYHNVNSSMESKIPNNSVSSVIGMGGGNVANMSEMAGARVKLQDPQSGGSECVVEIRG 596

Query: 595  SPGHLSGSHNMFPPFGSSSGHNSHNL---QDPYQNFNTQ-QAVHQSINPSYPNFSPSLAS 428
            S  HL+ + ++   F +S+G    N+   Q  YQN +   QA +Q++N      +P    
Sbjct: 597  SSEHLTAAQSILQAFMASAGAGGQNMNPQQGSYQNMSAHPQAPYQNMN------APPQVP 650

Query: 427  YQNI---PPQPTPYQNSSA-QGSFRY 362
            YQ++   P Q   Y N SA Q S++Y
Sbjct: 651  YQSMNAPPQQAAAYPNMSAQQSSYQY 676


>ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
            [Solanum tuberosum] gi|565383832|ref|XP_006358054.1|
            PREDICTED: KH domain-containing protein At4g18375-like
            isoform X2 [Solanum tuberosum]
          Length = 705

 Score =  686 bits (1771), Expect = 0.0
 Identities = 375/705 (53%), Positives = 464/705 (65%), Gaps = 35/705 (4%)
 Frame = -1

Query: 2371 MEDSRKFFLKKRPNPQFDAKGGIKRGKWQNSSLEQSLEDSRTPETVYRILCQSXXXXXXX 2192
            M++ ++  LK+R NPQF  KGG K  K   SS E+S E+S++ +T Y ILCQS       
Sbjct: 1    MDEYKRNSLKQRSNPQFKRKGGSKNAKLNFSSHERSSENSQSSDTTYCILCQSKKVGSVI 60

Query: 2191 XXXXXXXKALREETQAKITVADPVPGSDDRVIVILSPSTKSARRKTIDNAEDNQDNKEDN 2012
                   KALREETQAKITVAD VPGSDDR++++ SPSTK ARR+  D   DN + KE+N
Sbjct: 61   GKGGSIIKALREETQAKITVADSVPGSDDRIVIVSSPSTKLARRQNNDKNNDNPETKEEN 120

Query: 2011 IVMELHCAAQDALLKVHDRIVEEDIGGAESYSENEIVVTARLLVPNNMVGCLLGKKGDVI 1832
              ME HCAAQDALLKVH+RIVEED+ G ++  ++E V+  RLLVPNN+VGCLLG+KGDVI
Sbjct: 121  CSMEPHCAAQDALLKVHNRIVEEDLQGVQNEDKSETVIITRLLVPNNLVGCLLGRKGDVI 180

Query: 1831 QRLRSETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEVSTLLHRNPRKDKPP 1652
            Q+LRSET A+IRVL A+HLP+CA+++DELVQISGKP +VKKALYEVSTLLH+NPRKDKP 
Sbjct: 181  QKLRSETGASIRVLSAEHLPACAMTTDELVQISGKPALVKKALYEVSTLLHQNPRKDKPI 240

Query: 1651 LSFPLAHGTQNFHPPGPPTANMLPQGSSAWSRHNPNEQGRTKP-WAERFRNEPSGFGPAE 1475
             SFP+ HG Q FHPPGPP  NM+P G   WS+   N  G +       +RN+ +GFG A+
Sbjct: 241  SSFPMVHGAQGFHPPGPPMENMIPPGKPMWSQSKTNLNGMSPALGVGGYRNQLTGFGRAD 300

Query: 1474 FDGFPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVENVSPESDD 1295
            FD  PP   GEAP +F++KILC +AKIGGVIGKGGFNV+QLQQ+TGA I VE+V+PESD+
Sbjct: 301  FDYGPPPSAGEAPGDFTMKILCSAAKIGGVIGKGGFNVKQLQQDTGAGIHVEDVAPESDE 360

Query: 1294 RVIRASSIEALWDPRSQTIEAILHLQNKTSELNEKGIITTRLLVPSNKVGCILGQGGHVI 1115
            RVIR SS+E+ WDPRS+TI+AIL LQ+KTSE ++KGI+TTRLL PSNKVGCI+GQGG VI
Sbjct: 361  RVIRVSSLESFWDPRSRTIDAILQLQSKTSEFSDKGIVTTRLLFPSNKVGCIIGQGGQVI 420

Query: 1114 NEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVAKDALAEIASRLRMRCLRDASS 935
            NEMRRRTQADIRV SK+DKP+CAS DEELVQISG+  VAKDAL EI+SRLR RCLRDA+S
Sbjct: 421  NEMRRRTQADIRVLSKDDKPRCASADEELVQISGSIGVAKDALVEISSRLRERCLRDANS 480

Query: 934  KGEPAPTRSXXXXXXXXXXXXXXXXXXGATGVGSLGRYDHYKDXXXXXXXXXXXXXPTAI 755
            K E  P R                   GA G GS  RY+H K              P A 
Sbjct: 481  KVESTPVRPLPGFVPSEDFRSGDPQRSGAMGAGSSRRYEHLKGAVREYDHPSYPDLPIAT 540

Query: 754  GYPGVNG--DRRIRNDIADSIGGAGASNMSEIMGTRLKLHGHHAAGSEHLVDIRRSPGHL 581
             +  +    + +  +    S  G G  N+ E  G   +     + G   + DIR +  H+
Sbjct: 541  RFSNIRSPPEMKFPDHSYGSAKGTGGYNIDEFAGRSARFQDPRSVGPGFIDDIRGTSDHM 600

Query: 580  SGSHNMF-----------PPF---GSSSGHNSHNLQDPY-QNFNTQQAVHQS--INPSYP 452
            +  HN+F           P F   GS +G +S+  Q  Y QN+  QQ+ +QS      YP
Sbjct: 601  NAGHNVFHGSSENFNAGRPTFQGYGSPAGQSSNIQQGAYHQNYAAQQSAYQSYPAKGGYP 660

Query: 451  NFSPSLASYQNIPPQ---------------PTPYQNSSAQGSFRY 362
            + SPS   YQN  P                P PYQN +AQGS+ Y
Sbjct: 661  SGSPSQLPYQNPNPHQAPYQNINSQQHQQAPPPYQNMAAQGSYHY 705


>emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
          Length = 668

 Score =  681 bits (1758), Expect = 0.0
 Identities = 376/638 (58%), Positives = 444/638 (69%), Gaps = 11/638 (1%)
 Frame = -1

Query: 2374 NMEDSRKFFLKKRPNPQFDAKGGIKRGKWQNSSLEQSLEDSRTPETVYRILCQSXXXXXX 2195
            +ME  R+   KKRPN QF  KG  KRG+W NSS EQS  +S+  +TVYRILC S      
Sbjct: 28   SMEGXRRGSFKKRPNFQFKRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGV 87

Query: 2194 XXXXXXXXKALREETQAKITVADPVPGSDDRVIVILSPSTKSARRKTIDNAEDNQDNKED 2015
                    KALREETQAKITVAD VPGSD+RVI+I S  TK+ +     N+ ++ + +E+
Sbjct: 88   IGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEH---NSNEDPEREEE 144

Query: 2014 NIVMELHCAAQDALLKVHDRIVEEDI-GGAESYSENE-IVVTARLLVPNNMVGCLLGKKG 1841
               ME HC AQDAL+KVH+RI+EED+ GG E   +NE  VVTARLLVPNNMVGCLLGK+G
Sbjct: 145  QDHMEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRG 204

Query: 1840 DVIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEVSTLLHRNPRKD 1661
            DVIQRLRSET ANIRVLPA+HLP+CA+SSDELVQISGKP + KKALYEVSTLLH+NPRKD
Sbjct: 205  DVIQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKD 264

Query: 1660 KPPLSFPLAHGTQNFHPPGPPTANMLPQGSSAWSRHNPNEQG-RTKPWAERFRNEPSGFG 1484
            KPP SFP++ G Q FHPPG    NM P G+  WS  N N QG    PW   +R++PS   
Sbjct: 265  KPPSSFPMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMGGYRSQPSVV- 323

Query: 1483 PAEFDGFPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVENVSPE 1304
            P  FDG     GGEA  EFS+KILCP+ KIGGVIGKGGFNV+QLQQETGASI VE+   E
Sbjct: 324  PGGFDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAE 383

Query: 1303 SDDRVIRASSIEALWDPRSQTIEAILHLQNKTSELNEKGIITTRLLVPSNKVGCILGQGG 1124
            S++RVIR SS EALW+PRSQTIEAIL LQNKTSE ++KG +TTRLLVPS+KVGCILGQGG
Sbjct: 384  SEERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKGGMTTRLLVPSSKVGCILGQGG 443

Query: 1123 HVINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVAKDALAEIASRLRMRCLRD 944
            HVINEMRRRTQADIRV+SKEDKPKCASDDEELVQISGN+ VAKDALAEIASRLR+RCLRD
Sbjct: 444  HVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLRVRCLRD 503

Query: 943  ASSKGEPAPTRSXXXXXXXXXXXXXXXXXXGATGVGSLGRYDHYKDXXXXXXXXXXXXXP 764
            A+   EPAP                     GA G GS G ++  K              P
Sbjct: 504  ANGGVEPAPVGPVPGFGHPGKLPGGLPSSSGALGAGSSGGFELSKGGGLEYEPQSYPVPP 563

Query: 763  TAIGYPGVNG--DRRIRNDIADSI---GGAGASNMSEIMGTRLKLHGHHAAGSEHLVDIR 599
             A GY  VN   + +I N+   S+   GG   +NMSE+ G R+KL    + GSE +V+IR
Sbjct: 564  AATGYHNVNSSMESKIPNNSVSSVIGMGGGNVANMSEMAGARVKLQDPQSGGSECVVEIR 623

Query: 598  RSPGHLSGSHNMFPPFGSSSGHNSHNL---QDPYQNFN 494
             S  HL+ + ++   F +S+G    N+   Q  YQN +
Sbjct: 624  GSSEHLTAAQSILQAFMASAGAGGQNMNPQQGSYQNMS 661


>ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
            gi|557532838|gb|ESR44021.1| hypothetical protein
            CICLE_v10011187mg [Citrus clementina]
          Length = 710

 Score =  678 bits (1750), Expect = 0.0
 Identities = 378/680 (55%), Positives = 458/680 (67%), Gaps = 13/680 (1%)
 Frame = -1

Query: 2371 MEDSRKFFLKKRPNPQFDAKG--GIKRGKWQNSSLEQSLEDSRTPETVYRILCQSXXXXX 2198
            M+ S++ F KKRPN QF  KG  GIK+G W NSS EQS  +S+  +TVYRILC S     
Sbjct: 1    MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60

Query: 2197 XXXXXXXXXKALREETQAKITVADPVPGSDDRVIVILSPSTKSARRKTIDNAEDNQDNKE 2018
                     K+LREETQAKITVAD +PGS++RVI+I S  TK A+ +  D+    +  KE
Sbjct: 61   VIGKGGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 120

Query: 2017 DNIVMELHCAAQDALLKVHDRIVEEDI-GGAESYSENE-IVVTARLLVPNNMVGCLLGKK 1844
                ME HCAAQDALLKVHDRI+EED+ GG  S  +NE   VTARLLVPNNMVGCLLGK+
Sbjct: 121  S---MEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKR 177

Query: 1843 GDVIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEVSTLLHRNPRK 1664
            GDVIQRLRSET ANIRVLPAD LP CA+++DELVQISGKP + K+ALYEVSTLLH+NPRK
Sbjct: 178  GDVIQRLRSETGANIRVLPADRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRK 237

Query: 1663 DKPPLSFPLAHGTQNFHPPGPPTANMLPQGSSAWSRHNPNEQGR-TKPWAERFRNEPSGF 1487
            DKPP SFP A+G QNFH P  P A+M P G+S+W   N +  G  + PW   + ++PS  
Sbjct: 238  DKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRM 297

Query: 1486 GPAEFDGFPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVENVSP 1307
            G    +  PP + GE   EFS+KILC + KIGGVIGKGGFNV+QLQQETGASI VE+   
Sbjct: 298  GSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPT 357

Query: 1306 ESDDRVIRASSIEALWDPRSQTIEAILHLQNKTSELNEKGIITTRLLVPSNKVGCILGQG 1127
            +SD+RVIRAS+ E LW+PRSQTI+AIL LQNKTSE +EKG ITTRLLVPS+KVGCILGQG
Sbjct: 358  DSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQG 417

Query: 1126 GHVINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVAKDALAEIASRLRMRCLR 947
            GHVINEMRRRTQADIRV+SK+DKPKCAS+DEELVQISGN+ VAKDAL EIASRLR R LR
Sbjct: 418  GHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALTEIASRLRARTLR 477

Query: 946  DASSKGEPAPTRSXXXXXXXXXXXXXXXXXXGATGVGSLGRYDHYKDXXXXXXXXXXXXX 767
            DA+   EPAP                     G  G G  G Y+ ++              
Sbjct: 478  DANVGAEPAPVGPVQLVGAAGGLPSRGPLPSGPVGAGISGGYEPFR-GGYDYEPQSYPPP 536

Query: 766  PTAIGYPGVNG--DRRIRNDIADSIGGAGAS---NMSEIMGTRLKLHGHHAAGSEHLVDI 602
            P+A+GYP +N   + RI N    S+ G G S   N+ E+ G R+KL   H   SE +VDI
Sbjct: 537  PSAMGYPNMNSAFEARIPNKAVGSVMGTGGSNIPNVGEVAGARVKLQDPHPGSSECIVDI 596

Query: 601  RRSPGHLSGSHNMFPPFGSSSGHNSHNLQDPYQNFNTQQAVHQSIN---PSYPNFSPSLA 431
            R S  HL  +H  +  F  +SG +       YQN N QQ+ +Q+++    SY N +   +
Sbjct: 597  RGSSEHLISAHGTYQSF-MTSGQSMKVQPSSYQNINPQQSSYQTMSSHQSSYQNMNTQQS 655

Query: 430  SYQNIPPQPTPYQNSSAQGS 371
             Y ++  Q +PYQN + Q S
Sbjct: 656  PYHSVNAQQSPYQNINPQQS 675


>ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g18375 [Citrus sinensis]
          Length = 715

 Score =  677 bits (1746), Expect = 0.0
 Identities = 378/684 (55%), Positives = 458/684 (66%), Gaps = 17/684 (2%)
 Frame = -1

Query: 2371 MEDSRKFFLKKRPNPQFDAKG--GIKRGKWQNSSLEQSLEDSRTPETVYRILCQSXXXXX 2198
            M+ S++ F KKRPN QF  KG  GIK+G W NSS EQS  +S+  +TVYRILC S     
Sbjct: 1    MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60

Query: 2197 XXXXXXXXXKALREETQAKITVADPVPGSDDRVIVILSPSTKSARRKTIDNAEDNQDNKE 2018
                     K+LREETQAKITVAD +PGS++RVI+I S  TK A++   D+    +  KE
Sbjct: 61   VIGKGGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKKVNKDDDSAAETKKE 120

Query: 2017 DNIVMELHCAAQDALLKVHDRIVEEDI-GGAESYSENE-IVVTARLLVPNNMVGCLLGKK 1844
                ME HCAAQDALLKVHDRI+EED+ GG  S  +NE   VTARLLVPNNMVGCLLGK+
Sbjct: 121  S---MEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKR 177

Query: 1843 GDVIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEVSTLLHRNPRK 1664
            GDVIQRLRSET ANIRVLPAD LP CA+++DELVQISGKP + K+ALYEVSTLLH+NPRK
Sbjct: 178  GDVIQRLRSETGANIRVLPADRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRK 237

Query: 1663 DKPPLSFPLAHGTQNFHPPGPPTANMLPQGSSAWSRHNPNEQGR-TKPWAERFRNEPSGF 1487
            DKPP SFP A+G QNFH P  P A+M P G+S+W   N +  G  + PW   + ++PS  
Sbjct: 238  DKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRM 297

Query: 1486 GPAEFDGFPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVENVSP 1307
            G    +  PP + GE   EFS+KILC + KIGGVIGKGGFNV+QLQQETGASI VE+   
Sbjct: 298  GSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPT 357

Query: 1306 ESDDRVIRASSIEALWDPRSQTIEAILHLQNKTSELNEKGIITTRLLVPSNKVGCILGQG 1127
            +SD+RVIRAS+ E LW+PRSQTI+AIL LQNKTSE +EKG ITTRLLVPS+KVGCILGQG
Sbjct: 358  DSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQG 417

Query: 1126 GHVINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVAKDALAEIASRLRMRCLR 947
            GHVINEMRRRTQADIRV+SK+DKPKCAS+DEELVQISGN+ VAKDAL EIASRLR R LR
Sbjct: 418  GHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALTEIASRLRARTLR 477

Query: 946  DASSKGEPAPTRSXXXXXXXXXXXXXXXXXXGATGVGSLGRYDHYKD----XXXXXXXXX 779
            DA+   EPAP                     G  G G  G Y+ ++              
Sbjct: 478  DANVGAEPAPVGPVQLVGAAGGLPSRGPLPSGPVGAGISGGYEPFRGGYDYEPQSYPPPP 537

Query: 778  XXXXPTAIGYPGVNG--DRRIRNDIADSIGGAGAS---NMSEIMGTRLKLHGHHAAGSEH 614
                P+A GYP +N   + RI N    S+ G G S   N+ E++G R+KL   H   SE 
Sbjct: 538  SAPPPSATGYPNMNSAFEARIPNKAVGSVMGTGGSNIPNVGEVVGARVKLQDPHPGSSEC 597

Query: 613  LVDIRRSPGHLSGSHNMFPPFGSSSGHNSHNLQDPYQNFNTQQAVHQSIN---PSYPNFS 443
            +VDIR S  HL  +H  +  F  +SG +       YQN N QQ+ +Q+++    SY N +
Sbjct: 598  IVDIRGSSEHLISAHGTYQSF-MTSGQSMKVQPSSYQNINPQQSSYQTMSSHQSSYQNMN 656

Query: 442  PSLASYQNIPPQPTPYQNSSAQGS 371
               + Y ++  Q +PYQN + Q S
Sbjct: 657  TQQSPYHSVNAQQSPYQNINPQQS 680


>ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
            lycopersicum]
          Length = 707

 Score =  673 bits (1736), Expect = 0.0
 Identities = 372/707 (52%), Positives = 460/707 (65%), Gaps = 37/707 (5%)
 Frame = -1

Query: 2371 MEDSRKFFLKKRPNPQFDAKGGIKRGKWQNSSLEQSLEDSRTPETVYRILCQSXXXXXXX 2192
            M++ ++  LK+R NPQF  KGG K  K   SS E+S E+S++ +T Y ILCQS       
Sbjct: 1    MDEYKRNSLKQRSNPQFKRKGGSKNAKLNFSSHERSSENSQSSDTTYCILCQSKKVGSVI 60

Query: 2191 XXXXXXXKALREETQAKITVADPVPGSDDRVIVILSPSTKSARRKTIDNAEDNQDNKEDN 2012
                   KALREETQAKITVAD VPGSDDR+++I SPSTK ARR+  D   DN + KE+N
Sbjct: 61   GKGGSIIKALREETQAKITVADSVPGSDDRIVIISSPSTKLARRQNNDKNNDNPETKEEN 120

Query: 2011 IVMELHCAAQDALLKVHDRIVEEDIGGAESYSENEIVVTARLLVPNNMVGCLLGKKGDVI 1832
              ME HCAAQDALLKVH+RIVEED+ G ++  ++E V+  RLLVPNN+VGCLLG+KGDVI
Sbjct: 121  YSMEPHCAAQDALLKVHNRIVEEDLLGVQNEDKSEAVIITRLLVPNNLVGCLLGRKGDVI 180

Query: 1831 QRLRSETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEVSTLLHRNPRKDKPP 1652
            Q+LRSET A+IRVL A+HLP+CA+++DELVQISGKP +VKKALYEVSTLLH+NPRKDKP 
Sbjct: 181  QKLRSETGASIRVLSAEHLPACAMTTDELVQISGKPALVKKALYEVSTLLHQNPRKDKPI 240

Query: 1651 LSFPLAHGTQNFHPPGPPTANMLPQGSSAWSRHNPNEQGRTKP-WAERFRNEPSGFGPAE 1475
             SFP+ HG Q FHPPGPP  NM+P G   WS+   N  G         +RN+ +GFG A+
Sbjct: 241  SSFPMVHGAQGFHPPGPPMENMIPPGKPMWSQSKTNLNGMPPALGVGGYRNQLTGFGRAD 300

Query: 1474 FDGFPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVENVSPESDD 1295
            FD  PP   GEAP +F++KILC +AKIGGVIGKGGFNV+QLQQETGA I VE+V+PESD+
Sbjct: 301  FDYGPPPSAGEAPGDFTMKILCSAAKIGGVIGKGGFNVKQLQQETGAGIHVEDVAPESDE 360

Query: 1294 RVIRASSIEALWDPRSQTIEAILHLQNKTSELNEKGIITTRLLVPSNKVGCILGQGGHVI 1115
            RVIR SS+E+ WDPRS+TI+AIL LQ+KTSE ++KGI+TTRLL PSNKVGCI+GQGG VI
Sbjct: 361  RVIRVSSLESFWDPRSRTIDAILQLQSKTSEFSDKGIVTTRLLFPSNKVGCIIGQGGQVI 420

Query: 1114 NEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVAKDALAEIASRLRMRCLRDASS 935
            NEMRRRTQADIRV SK++KP+CAS DEELVQISG+  VAKDAL EI+SRLR RCLRDA+S
Sbjct: 421  NEMRRRTQADIRVLSKDEKPRCASADEELVQISGSIGVAKDALVEISSRLRERCLRDANS 480

Query: 934  KGEPAPTRSXXXXXXXXXXXXXXXXXXGATGVGSLGRYDHYKDXXXXXXXXXXXXXPTAI 755
            K E    R                   G  G GS  RY+H K              P A 
Sbjct: 481  KVESTHVRPLPGFVPSEDFRSRDPQRSGVMGAGSSRRYEHLKGAVRECDHPSYPDLPIAT 540

Query: 754  GYPGVNG--DRRIRNDIADSIGGAGASNMSEIMGTRLKLHGHHAAGSEHLVDIRRSPGHL 581
             +       + +  +    +  G G  N+ E  G+  +     + G   + DIR +   +
Sbjct: 541  RFSNTRSPPEMKFPDHSYGTAKGTGGYNIDEFAGSSARYQDPRSIGPGFVDDIRGTSDRM 600

Query: 580  SGSHNMF-----------PPF---GSSSGHNSHNLQDPY-QNFNTQQAVHQS--INPSYP 452
            +  HN+F           P F   GS +G +S+  Q  Y QN+  QQ+ +QS      YP
Sbjct: 601  NAGHNVFHGSSENLNAGRPTFQGYGSPAGQSSNIHQGAYHQNYAAQQSAYQSYPAKGGYP 660

Query: 451  NFSPSLASYQNIPPQ-----------------PTPYQNSSAQGSFRY 362
            + SPS   YQN  P                  P PYQN +AQGS+ Y
Sbjct: 661  SGSPSQLPYQNPNPHQAPYQNINSQQHQHQQAPPPYQNMAAQGSYHY 707


>gb|EOY04202.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma cacao]
            gi|508712307|gb|EOY04204.1| RNA-binding KH
            domain-containing protein isoform 1 [Theobroma cacao]
          Length = 706

 Score =  630 bits (1625), Expect = e-178
 Identities = 362/685 (52%), Positives = 452/685 (65%), Gaps = 18/685 (2%)
 Frame = -1

Query: 2371 MEDSRKFFLKKRPNPQFDAKG--GIKRGKW-QNSSLEQSLEDSRTPETVYRILCQSXXXX 2201
            M+  ++ FLKK  N  F  KG    ++ KW  NS  EQ   +  + +TVYR+LC S    
Sbjct: 1    MDGRKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIG 60

Query: 2200 XXXXXXXXXXKALREETQAKITVADPVPGSDDRVIVILSPSTKSARRKTIDNAEDNQ-DN 2024
                      KALREETQAKITV D V G D+RVI+I S   K    KT ++ ED++ +N
Sbjct: 61   GVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKV---KTQNSDEDSRGEN 117

Query: 2023 KEDNIV-MELHCAAQDALLKVHDRIVEEDIGGAESYSENE--IVVTARLLVPNNMVGCLL 1853
            K+D +V ME  CAAQDALLKVHD+I E+D+ G  +  ++    VVTARLLVPNNMVGCLL
Sbjct: 118  KKDEVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLL 177

Query: 1852 GKKGDVIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEVSTLLHRN 1673
            GK+GDVIQRLRSET A+IR+LPADHLP+CA+++DELVQISGK  + K+ALYEVSTLLH+N
Sbjct: 178  GKRGDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQN 237

Query: 1672 PRKDKPPLSFPLAHGTQNFHPPGPPTANMLPQGSSAWSRHNPNEQG-RTKPWAERFRNEP 1496
            PRKD PPLSFP+ H  QNF PP     + +P  +  WS  N +     + PW     N P
Sbjct: 238  PRKDNPPLSFPVPHAGQNFPPP-----SAIPPSNPMWSHRNSSPHDIPSMPWMVPHGNRP 292

Query: 1495 SGFGPAEFDGFPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVEN 1316
            SGFGP     FPP+RG EA  EFS+KILCP+ KIGGVIGKGGFNV+QLQQETGA I VE+
Sbjct: 293  SGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVED 352

Query: 1315 VSPESDDRVIRASSIEALWDPRSQTIEAILHLQNKTSELNEKGIITTRLLVPSNKVGCIL 1136
             + ESD+RVIR S+IE LW+PRSQTI+AIL LQNKTSE +EKG +TTRLLVPS+KVGCIL
Sbjct: 353  ATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSSKVGCIL 412

Query: 1135 GQGGHVINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVAKDALAEIASRLRMR 956
            GQGGHVINEMRRRTQADIRV+SK+DKPKCAS+DEELVQISGN+ VAKDALAEIASRLR+R
Sbjct: 413  GQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVR 472

Query: 955  CLRDASSKGEPAPTRSXXXXXXXXXXXXXXXXXXGATGVGSLGRYDHYK--DXXXXXXXX 782
             LRD ++  E AP                      A G G  G Y+ ++           
Sbjct: 473  TLRDVNAGAETAPV-GPVNGFGPARSMADGLPPAAAIGPGRSGGYESFRGGGGREYEPQN 531

Query: 781  XXXXXPTAIGYPGVNG--DRRIRNDIADSIGGAGASNM--SEIMGTRLKLHGHHAAGSEH 614
                 P A+ Y  +NG  + +I N+++ S+ G G S +  SE+ G R++L      GSE 
Sbjct: 532  NYSVPPAAVRYSNMNGALEAKILNNMSSSVTGTGGSTILNSEVSGARVRLEDPQTGGSE- 590

Query: 613  LVDIRRSPGHLSGSHNMFPPFGSSSGHNSHNLQDPYQNFNTQQAVHQSINPS---YPNFS 443
              + R S  HL+ + ++F  F  SSG + +  Q  YQN + QQ+ + ++N     YPN +
Sbjct: 591  --EFRGSSEHLTAAQSIFQSFMPSSGQSMNAQQSSYQNLSVQQSSYLNMNAQRSPYPNMN 648

Query: 442  PSLASYQN-IPPQPTPYQNSSAQGS 371
               + YQN  P Q +PYQN S Q S
Sbjct: 649  AQQSPYQNRHPHQSSPYQNLSVQQS 673


>gb|EOY04205.1| RNA-binding KH domain-containing protein isoform 4 [Theobroma cacao]
          Length = 706

 Score =  628 bits (1619), Expect = e-177
 Identities = 360/685 (52%), Positives = 452/685 (65%), Gaps = 18/685 (2%)
 Frame = -1

Query: 2371 MEDSRKFFLKKRPNPQFDAKG--GIKRGKW-QNSSLEQSLEDSRTPETVYRILCQSXXXX 2201
            M+  ++ FLKK  N  F  KG    ++ KW  NS  EQ   +  + +TVYR+LC S    
Sbjct: 1    MDGRKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIG 60

Query: 2200 XXXXXXXXXXKALREETQAKITVADPVPGSDDRVIVILSPSTKSARRKTIDNAEDNQ-DN 2024
                      KALREETQAKITV D V G D+RVI+I S   K    KT ++ ED++ +N
Sbjct: 61   GVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKV---KTQNSDEDSRGEN 117

Query: 2023 KEDNIV-MELHCAAQDALLKVHDRIVEEDIGGAESYSENE--IVVTARLLVPNNMVGCLL 1853
            K+D +V ME  CAAQDALLKVHD+I E+D+ G  +  ++    VVTARLLVPNNMVGCLL
Sbjct: 118  KKDEVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLL 177

Query: 1852 GKKGDVIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEVSTLLHRN 1673
            GK+GDVIQRLRSET A+IR+LPADHLP+CA+++DELVQISGK  + K+ALYEVSTLLH+N
Sbjct: 178  GKRGDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQN 237

Query: 1672 PRKDKPPLSFPLAHGTQNFHPPGPPTANMLPQGSSAWSRHNPNEQG-RTKPWAERFRNEP 1496
            PRKD PPLSFP+ H  QNF PP     + +P  +  WS  N +     + PW     N P
Sbjct: 238  PRKDNPPLSFPVPHAGQNFPPP-----SAIPPSNPMWSHRNSSPHDIPSMPWMVPHGNRP 292

Query: 1495 SGFGPAEFDGFPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVEN 1316
            SGFGP     FPP+RG EA  EFS+KILCP+ KIGGVIGKGGFNV+QLQQETGA I VE+
Sbjct: 293  SGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVED 352

Query: 1315 VSPESDDRVIRASSIEALWDPRSQTIEAILHLQNKTSELNEKGIITTRLLVPSNKVGCIL 1136
             + ESD+RVIR S+IE LW+PRSQTI+AIL LQNKTSE +EKG +TTRLLVPS+KVGCIL
Sbjct: 353  ATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSSKVGCIL 412

Query: 1135 GQGGHVINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVAKDALAEIASRLRMR 956
            GQGGHVINEMRRRTQADIRV+SK+DKPKCAS+DEELVQISGN+ VAKDALAEIASRLR+R
Sbjct: 413  GQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVR 472

Query: 955  CLRDASSKGEPAPTRSXXXXXXXXXXXXXXXXXXGATGVGSLGRYDHYK--DXXXXXXXX 782
             LRD ++  E AP                      A G G  G Y+ ++           
Sbjct: 473  TLRDVNAGAETAPV-GPVNGFGPARSMADGLPPAAAIGPGRSGGYESFRGGGGREYEPQN 531

Query: 781  XXXXXPTAIGYPGVNG--DRRIRNDIADSIGGAGASNM--SEIMGTRLKLHGHHAAGSEH 614
                 P A+ Y  +NG  + +I N+++ S+ G G S +  +++ G R++L      GSE 
Sbjct: 532  NYSVPPAAVRYSNMNGALEAKILNNMSSSVTGTGGSTILNTQVSGARVRLEDPQTGGSE- 590

Query: 613  LVDIRRSPGHLSGSHNMFPPFGSSSGHNSHNLQDPYQNFNTQQAVHQSINPS---YPNFS 443
              + R S  HL+ + ++F  F  SSG + +  Q  YQN + QQ+ + ++N     YPN +
Sbjct: 591  --EFRGSSEHLTAAQSIFQSFMPSSGQSMNAQQSSYQNLSVQQSSYLNMNAQRSPYPNMN 648

Query: 442  PSLASYQN-IPPQPTPYQNSSAQGS 371
               + YQN  P Q +PYQN S Q S
Sbjct: 649  AQQSPYQNRHPHQSSPYQNLSVQQS 673


>ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
            gi|557532839|gb|ESR44022.1| hypothetical protein
            CICLE_v10011187mg [Citrus clementina]
          Length = 528

 Score =  611 bits (1575), Expect = e-172
 Identities = 327/526 (62%), Positives = 383/526 (72%), Gaps = 5/526 (0%)
 Frame = -1

Query: 2371 MEDSRKFFLKKRPNPQFDAKG--GIKRGKWQNSSLEQSLEDSRTPETVYRILCQSXXXXX 2198
            M+ S++ F KKRPN QF  KG  GIK+G W NSS EQS  +S+  +TVYRILC S     
Sbjct: 1    MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60

Query: 2197 XXXXXXXXXKALREETQAKITVADPVPGSDDRVIVILSPSTKSARRKTIDNAEDNQDNKE 2018
                     K+LREETQAKITVAD +PGS++RVI+I S  TK A+ +  D+    +  KE
Sbjct: 61   VIGKGGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 120

Query: 2017 DNIVMELHCAAQDALLKVHDRIVEEDI-GGAESYSENE-IVVTARLLVPNNMVGCLLGKK 1844
                ME HCAAQDALLKVHDRI+EED+ GG  S  +NE   VTARLLVPNNMVGCLLGK+
Sbjct: 121  S---MEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKR 177

Query: 1843 GDVIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEVSTLLHRNPRK 1664
            GDVIQRLRSET ANIRVLPAD LP CA+++DELVQISGKP + K+ALYEVSTLLH+NPRK
Sbjct: 178  GDVIQRLRSETGANIRVLPADRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRK 237

Query: 1663 DKPPLSFPLAHGTQNFHPPGPPTANMLPQGSSAWSRHNPNEQGR-TKPWAERFRNEPSGF 1487
            DKPP SFP A+G QNFH P  P A+M P G+S+W   N +  G  + PW   + ++PS  
Sbjct: 238  DKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRM 297

Query: 1486 GPAEFDGFPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVENVSP 1307
            G    +  PP + GE   EFS+KILC + KIGGVIGKGGFNV+QLQQETGASI VE+   
Sbjct: 298  GSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPT 357

Query: 1306 ESDDRVIRASSIEALWDPRSQTIEAILHLQNKTSELNEKGIITTRLLVPSNKVGCILGQG 1127
            +SD+RVIRAS+ E LW+PRSQTI+AIL LQNKTSE +EKG ITTRLLVPS+KVGCILGQG
Sbjct: 358  DSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQG 417

Query: 1126 GHVINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVAKDALAEIASRLRMRCLR 947
            GHVINEMRRRTQADIRV+SK+DKPKCAS+DEELVQISGN+ VAKDAL EIASRLR R LR
Sbjct: 418  GHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALTEIASRLRARTLR 477

Query: 946  DASSKGEPAPTRSXXXXXXXXXXXXXXXXXXGATGVGSLGRYDHYK 809
            DA+   EPAP                     G  G G  G Y+ ++
Sbjct: 478  DANVGAEPAPVGPVQLVGAAGGLPSRGPLPSGPVGAGISGGYEPFR 523


>ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g18375-like [Fragaria
            vesca subsp. vesca]
          Length = 760

 Score =  607 bits (1566), Expect = e-171
 Identities = 348/677 (51%), Positives = 435/677 (64%), Gaps = 8/677 (1%)
 Frame = -1

Query: 2371 MEDSRKFFLKKRPNPQFDAKGGI-KRGKWQNSSLEQSLEDSRTPETVYRILCQSXXXXXX 2195
            M+ +++  L +RP  QF  KG   ++G   NS+ EQS  ++++ ETVYRILC S      
Sbjct: 1    MDWNKRNVLSQRPTVQFKRKGSSNQKGNLNNSNREQSSGNAQSLETVYRILCPSKKIGGV 60

Query: 2194 XXXXXXXXKALREETQAKITVADPVPGSDDRVIVILSPSTKSARRKTIDNAEDNQDNKED 2015
                    K+LREET++KITV+D VPGSD+RVI+I SP TK +R++   N++++    ++
Sbjct: 61   IGKGGGIIKSLREETRSKITVSDSVPGSDERVIIIFSPPTKISRKQ---NSDEDSHKADE 117

Query: 2014 NIVMELHCAAQDALLKVHDRIVEEDI-GGAESYSENEIVVTARLLVPNNMVGCLLGKKGD 1838
               +E HCAAQDALLKVHDRIVEED+  G     +NE +V  RLLVPNN+VGCLLGK+GD
Sbjct: 118  QKPLEPHCAAQDALLKVHDRIVEEDLYDGVTFDDDNENIVVTRLLVPNNLVGCLLGKRGD 177

Query: 1837 VIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEVSTLLHRNPRKDK 1658
            VIQRLRSETRANIRVLPAD LP+CA+ +DELVQISGKP + KKALYEVSTLLH+NPRKDK
Sbjct: 178  VIQRLRSETRANIRVLPADQLPTCAMDTDELVQISGKPDVAKKALYEVSTLLHQNPRKDK 237

Query: 1657 PPLSFPLAHGTQNFHPPGPPTANMLPQGSSAWSRHNPNEQGRTKPWAERFRNEPSGFGPA 1478
            PPL   +  G Q FH  G P  NM P G+  W    P+      PW     N  SG+G  
Sbjct: 238  PPLGLAIPFGGQGFHLRGAP--NMFPPGNPIWPNREPSHGMPPMPWIGECENHSSGYGRG 295

Query: 1477 EFDGFPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVENVSPESD 1298
             FDG P   G EA  EF +KILC + KIGGVIGKGGFNV+QLQ+ETGA+I V++ S +S+
Sbjct: 296  GFDGDPAGHGVEASAEFFIKILCSAGKIGGVIGKGGFNVKQLQEETGANIHVQDASTDSE 355

Query: 1297 DRVIRASSIEALWDPRSQTIEAILHLQNKTSELNEKGIITTRLLVPSNKVGCILGQGGHV 1118
            +RVIR S+ E L  PRSQTIEAIL LQNK SEL++KG ITTRLLVPS+KVGCILGQGG V
Sbjct: 356  ERVIRVSAFEVLRIPRSQTIEAILQLQNKASELSDKGTITTRLLVPSSKVGCILGQGGQV 415

Query: 1117 INEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVAKDALAEIASRLRMRCLRDAS 938
            INEMRRRTQADIRV+SK+D+PKCA +DEELVQISGN+AVAKDALAEI SRLR+R LRD +
Sbjct: 416  INEMRRRTQADIRVYSKDDRPKCADEDEELVQISGNFAVAKDALAEITSRLRIRTLRDTN 475

Query: 937  SKGEPAPT-RSXXXXXXXXXXXXXXXXXXGATGVGSLGRYDHYKDXXXXXXXXXXXXXPT 761
            +  E AP                       A   GS GRYDH K              P 
Sbjct: 476  AGEEHAPVGPPPRFGPPGSLPVKGMPPPLSAVRAGSSGRYDHLKVGRHEYEPEGYPVPPA 535

Query: 760  AIGYPGVNG--DRRIRNDIADS---IGGAGASNMSEIMGTRLKLHGHHAAGSEHLVDIRR 596
            A GY  VN   D RI N+   S   IGG+  S++ E+   R+K     + G E + +IR 
Sbjct: 536  ASGYQRVNRALDSRIPNNAVGSFTGIGGSDVSHIGEVPRPRVKYQDSQSGGFEQVAEIRG 595

Query: 595  SPGHLSGSHNMFPPFGSSSGHNSHNLQDPYQNFNTQQAVHQSINPSYPNFSPSLASYQNI 416
            S   L+ + N+     +S G N+      + N NT+Q        SYPN S   + Y   
Sbjct: 596  S-DQLNAAQNILQALMASMGQNASAQPSSHHNANTRQG-------SYPNISDHQSPYHIN 647

Query: 415  PPQPTPYQNSSAQGSFR 365
             P+ +PY+ ++ Q  +R
Sbjct: 648  APR-SPYRVNAPQSPYR 663


>gb|EMJ18848.1| hypothetical protein PRUPE_ppa027198mg, partial [Prunus persica]
          Length = 576

 Score =  596 bits (1536), Expect = e-167
 Identities = 328/577 (56%), Positives = 391/577 (67%), Gaps = 8/577 (1%)
 Frame = -1

Query: 2371 MEDSRKFFLKKRPNPQFDAKGG---IKRGKWQNSSLEQSLEDSRTPETVYRILCQSXXXX 2201
            M+ +++ F KKRPN QF  KGG    K+G W NS+ EQ LE+ ++ +TVYRILC S    
Sbjct: 1    MDGNKRNFFKKRPNVQFKRKGGNNNYKKGNWNNSTREQLLENYQSLDTVYRILCPSKRIG 60

Query: 2200 XXXXXXXXXXKALREETQAKITVADPVPGSDDRVIVILSPSTKSARRKTIDNAEDNQDNK 2021
                      KALREET+AKITVAD V GSD+RVI+I S  TK + ++T D     ++  
Sbjct: 61   GVIGKGGGIVKALREETRAKITVADSVLGSDERVIIIFSSPTKISSKQTNDGDSSEENEL 120

Query: 2020 EDNIVMELHCAAQDALLKVHDRIVEEDIGGAESYSENE--IVVTARLLVPNNMVGCLLGK 1847
            E    M+ HCAAQDALLKVH+RIVEED+ G  ++ ++    VVTARLLVPNNMVGCLLGK
Sbjct: 121  EP---MDPHCAAQDALLKVHNRIVEEDLFGGVTFDDDNENSVVTARLLVPNNMVGCLLGK 177

Query: 1846 KGDVIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEVSTLLHRNPR 1667
             GDVIQRLRSET A+IRVLPAD LP+CA+ +DELVQISGKP + K+ALYEVSTLLH+NPR
Sbjct: 178  GGDVIQRLRSETSASIRVLPADQLPTCAMETDELVQISGKPDVTKRALYEVSTLLHQNPR 237

Query: 1666 KDKPPLSFPLAHGTQNFHPPGPPTANMLPQGSSAWSRHNPNEQGRTKPWAERFRNEPSGF 1487
            KDKPP  FP+    Q F PPG P  N+LP G+  WS   P+      P  E + N  S F
Sbjct: 238  KDKPPSGFPMPFWGQGFRPPGAPMTNVLPPGNPMWSNRAPSHSTAPMPRMEGYGNCSSEF 297

Query: 1486 GPAEFDGFPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVENVSP 1307
                F+G PP  GGEA  EFS+KILC   KIGGVIGKGGFNV+QLQ ETGASI V+  S 
Sbjct: 298  ALGGFNGVPPGHGGEALAEFSMKILCSPGKIGGVIGKGGFNVKQLQLETGASIHVQEAST 357

Query: 1306 ESDDRVIRASSIEALWDPRSQTIEAILHLQNKTSELNEKGIITTRLLVPSNKVGCILGQG 1127
            +S++RVI  S+ EA W+P SQTIEAIL LQNKTSEL++KGIITTRLLVPS+KVGCILGQG
Sbjct: 358  DSEERVIHVSAFEAFWNPISQTIEAILELQNKTSELSDKGIITTRLLVPSSKVGCILGQG 417

Query: 1126 GHVINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVAKDALAEIASRLRMRCLR 947
            G VINEMRRRTQADIRV+SK+D+P+CA++DEELVQISGN+ VAKDALAEI SRLR+R LR
Sbjct: 418  GQVINEMRRRTQADIRVYSKDDRPRCAAEDEELVQISGNFGVAKDALAEITSRLRVRTLR 477

Query: 946  DASSKGEPAPT-RSXXXXXXXXXXXXXXXXXXGATGVGSLGRYDHYKDXXXXXXXXXXXX 770
            DA++  EPA    +                   A G GS  RYD  K             
Sbjct: 478  DANAGAEPALVGPAHGFGLAGSVPGGGPRQPPSAVGAGSSSRYDPLKVGRHEYELQSYRI 537

Query: 769  XPTAIGYPGVNG--DRRIRNDIADSIGGAGASNMSEI 665
              TA GYP VN   + +I  +  DS  G    N S I
Sbjct: 538  PSTASGYPSVNHALEGKIPKNTVDSFPGTRGGNTSTI 574


>ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
            gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein,
            putative [Ricinus communis]
          Length = 537

 Score =  582 bits (1499), Expect = e-163
 Identities = 309/487 (63%), Positives = 365/487 (74%), Gaps = 2/487 (0%)
 Frame = -1

Query: 2371 MEDSRKFFLKKRPNPQFDAKGGIKRGKWQNSSLEQSLEDSRTPETVYRILCQSXXXXXXX 2192
            M+ +++   KK  N QF  KG  ++GKW NS  E+S  +    +TVYRILC S       
Sbjct: 1    MDGNKRNVFKKYQNNQFKRKGVTRKGKWNNSGREESSGNPLPVDTVYRILCPSRKIGGVI 60

Query: 2191 XXXXXXXKALREETQAKITVADPVPGSDDRVIVILSPSTKSARRKTIDNAEDNQDNKEDN 2012
                   K LREETQAKITVADPVPGSD+RVI+I S   K +R    D+ +   +N++D 
Sbjct: 61   GKGGGIIKGLREETQAKITVADPVPGSDERVIIIYSSPEKISRNHN-DHEDLTMENEQD- 118

Query: 2011 IVMELHCAAQDALLKVHDRIVEEDI-GGAESYSENEI-VVTARLLVPNNMVGCLLGKKGD 1838
             +ME +CAAQDALLKVHDRIVEED+ GG  S  +NE   VTARLLVPNNMVGCLLGK+GD
Sbjct: 119  -IMEPYCAAQDALLKVHDRIVEEDLFGGMTSDDDNENGFVTARLLVPNNMVGCLLGKRGD 177

Query: 1837 VIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEVSTLLHRNPRKDK 1658
            VIQRLRSET ANIRVLPADHLP+CA+S+DELVQIS KP + KKALYEVSTLLH+NPRKDK
Sbjct: 178  VIQRLRSETGANIRVLPADHLPTCAMSTDELVQISAKPDVAKKALYEVSTLLHQNPRKDK 237

Query: 1657 PPLSFPLAHGTQNFHPPGPPTANMLPQGSSAWSRHNPNEQGRTKPWAERFRNEPSGFGPA 1478
            PP S P+ +  Q+FHPPG P  N+ P GS  W  HN +      P   R+ ++ SGFGP 
Sbjct: 238  PP-SVPMPYSGQSFHPPGGPMKNLPPLGSPMWPHHNSSHSIPPMPIMGRYGSQSSGFGPG 296

Query: 1477 EFDGFPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVENVSPESD 1298
             FD  P     E   EFS+KILC + KIGGVIGKGG NV+ +QQ+TGASI VE+ S ESD
Sbjct: 297  GFDDVPRGHVAEPSAEFSMKILCSAGKIGGVIGKGGSNVKVVQQDTGASIHVEDASAESD 356

Query: 1297 DRVIRASSIEALWDPRSQTIEAILHLQNKTSELNEKGIITTRLLVPSNKVGCILGQGGHV 1118
            +RVIR S+ EALW+PRSQTI+AIL LQNKTS+ +EKG ITTRLLVPS+KVGCILGQGG V
Sbjct: 357  ERVIRVSASEALWNPRSQTIDAILQLQNKTSDFSEKGTITTRLLVPSSKVGCILGQGGQV 416

Query: 1117 INEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVAKDALAEIASRLRMRCLRDAS 938
            INEMRRRTQADIRV+SK++KPKCAS+DEELVQISG + VAKDALAEIASRLR+R LRD +
Sbjct: 417  INEMRRRTQADIRVYSKDEKPKCASEDEELVQISGKFGVAKDALAEIASRLRVRTLRDVN 476

Query: 937  SKGEPAP 917
            +  EP P
Sbjct: 477  AGAEPGP 483


>gb|EOY04206.1| RNA-binding KH domain-containing protein isoform 5 [Theobroma cacao]
          Length = 591

 Score =  577 bits (1487), Expect = e-162
 Identities = 327/594 (55%), Positives = 401/594 (67%), Gaps = 14/594 (2%)
 Frame = -1

Query: 2371 MEDSRKFFLKKRPNPQFDAKG--GIKRGKW-QNSSLEQSLEDSRTPETVYRILCQSXXXX 2201
            M+  ++ FLKK  N  F  KG    ++ KW  NS  EQ   +  + +TVYR+LC S    
Sbjct: 1    MDGRKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIG 60

Query: 2200 XXXXXXXXXXKALREETQAKITVADPVPGSDDRVIVILSPSTKSARRKTIDNAEDNQ-DN 2024
                      KALREETQAKITV D V G D+RVI+I S   K    KT ++ ED++ +N
Sbjct: 61   GVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKV---KTQNSDEDSRGEN 117

Query: 2023 KEDNIV-MELHCAAQDALLKVHDRIVEEDIGGAESYSENE--IVVTARLLVPNNMVGCLL 1853
            K+D +V ME  CAAQDALLKVHD+I E+D+ G  +  ++    VVTARLLVPNNMVGCLL
Sbjct: 118  KKDEVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLL 177

Query: 1852 GKKGDVIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEVSTLLHRN 1673
            GK+GDVIQRLRSET A+IR+LPADHLP+CA+++DELVQISGK  + K+ALYEVSTLLH+N
Sbjct: 178  GKRGDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQN 237

Query: 1672 PRKDKPPLSFPLAHGTQNFHPPGPPTANMLPQGSSAWSRHNPNEQG-RTKPWAERFRNEP 1496
            PRKD PPLSFP+ H  QNF PP     + +P  +  WS  N +     + PW     N P
Sbjct: 238  PRKDNPPLSFPVPHAGQNFPPP-----SAIPPSNPMWSHRNSSPHDIPSMPWMVPHGNRP 292

Query: 1495 SGFGPAEFDGFPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVEN 1316
            SGFGP     FPP+RG EA  EFS+KILCP+ KIGGVIGKGGFNV+QLQQETGA I VE+
Sbjct: 293  SGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVED 352

Query: 1315 VSPESDDRVIRASSIEALWDPRSQTIEAILHLQNKTSELNEKGIITTRLLVPSNKVGCIL 1136
             + ESD+RVIR S+IE LW+PRSQTI+AIL LQNKTSE +EKG +TTRLLVPS+KVGCIL
Sbjct: 353  ATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSSKVGCIL 412

Query: 1135 GQGGHVINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVAKDALAEIASRLRMR 956
            GQGGHVINEMRRRTQADIRV+SK+DKPKCAS+DEELVQISGN+ VAKDALAEIASRLR+R
Sbjct: 413  GQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVR 472

Query: 955  CLRDASSKGEPAPTRSXXXXXXXXXXXXXXXXXXGATGVGSLGRYDHYK--DXXXXXXXX 782
             LRD ++  E AP                      A G G  G Y+ ++           
Sbjct: 473  TLRDVNAGAETAPV-GPVNGFGPARSMADGLPPAAAIGPGRSGGYESFRGGGGREYEPQN 531

Query: 781  XXXXXPTAIGYPGVNG--DRRIRNDIADSIGGAGASNM--SEIMGTRLKLHGHH 632
                 P A+ Y  +NG  + +I N+++ S+ G G S +  SE+      L  H+
Sbjct: 532  NYSVPPAAVRYSNMNGALEAKILNNMSSSVTGTGGSTILNSEVFDLEWSLGDHN 585


>gb|EOY04203.1| RNA-binding KH domain-containing protein isoform 2 [Theobroma cacao]
          Length = 580

 Score =  575 bits (1482), Expect = e-161
 Identities = 323/578 (55%), Positives = 395/578 (68%), Gaps = 12/578 (2%)
 Frame = -1

Query: 2371 MEDSRKFFLKKRPNPQFDAKG--GIKRGKW-QNSSLEQSLEDSRTPETVYRILCQSXXXX 2201
            M+  ++ FLKK  N  F  KG    ++ KW  NS  EQ   +  + +TVYR+LC S    
Sbjct: 1    MDGRKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIG 60

Query: 2200 XXXXXXXXXXKALREETQAKITVADPVPGSDDRVIVILSPSTKSARRKTIDNAEDNQ-DN 2024
                      KALREETQAKITV D V G D+RVI+I S   K    KT ++ ED++ +N
Sbjct: 61   GVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKV---KTQNSDEDSRGEN 117

Query: 2023 KEDNIV-MELHCAAQDALLKVHDRIVEEDIGGAESYSENE--IVVTARLLVPNNMVGCLL 1853
            K+D +V ME  CAAQDALLKVHD+I E+D+ G  +  ++    VVTARLLVPNNMVGCLL
Sbjct: 118  KKDEVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLL 177

Query: 1852 GKKGDVIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEVSTLLHRN 1673
            GK+GDVIQRLRSET A+IR+LPADHLP+CA+++DELVQISGK  + K+ALYEVSTLLH+N
Sbjct: 178  GKRGDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQN 237

Query: 1672 PRKDKPPLSFPLAHGTQNFHPPGPPTANMLPQGSSAWSRHNPNEQG-RTKPWAERFRNEP 1496
            PRKD PPLSFP+ H  QNF PP     + +P  +  WS  N +     + PW     N P
Sbjct: 238  PRKDNPPLSFPVPHAGQNFPPP-----SAIPPSNPMWSHRNSSPHDIPSMPWMVPHGNRP 292

Query: 1495 SGFGPAEFDGFPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVEN 1316
            SGFGP     FPP+RG EA  EFS+KILCP+ KIGGVIGKGGFNV+QLQQETGA I VE+
Sbjct: 293  SGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVED 352

Query: 1315 VSPESDDRVIRASSIEALWDPRSQTIEAILHLQNKTSELNEKGIITTRLLVPSNKVGCIL 1136
             + ESD+RVIR S+IE LW+PRSQTI+AIL LQNKTSE +EKG +TTRLLVPS+KVGCIL
Sbjct: 353  ATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSSKVGCIL 412

Query: 1135 GQGGHVINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVAKDALAEIASRLRMR 956
            GQGGHVINEMRRRTQADIRV+SK+DKPKCAS+DEELVQISGN+ VAKDALAEIASRLR+R
Sbjct: 413  GQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVR 472

Query: 955  CLRDASSKGEPAPTRSXXXXXXXXXXXXXXXXXXGATGVGSLGRYDHYK--DXXXXXXXX 782
             LRD ++  E AP                      A G G  G Y+ ++           
Sbjct: 473  TLRDVNAGAETAPV-GPVNGFGPARSMADGLPPAAAIGPGRSGGYESFRGGGGREYEPQN 531

Query: 781  XXXXXPTAIGYPGVNG--DRRIRNDIADSIGGAGASNM 674
                 P A+ Y  +NG  + +I N+++ S+ G G S +
Sbjct: 532  NYSVPPAAVRYSNMNGALEAKILNNMSSSVTGTGGSTI 569


>ref|XP_002329331.1| predicted protein [Populus trichocarpa]
            gi|566171617|ref|XP_006383459.1| hypothetical protein
            POPTR_0005s15690g [Populus trichocarpa]
            gi|550339070|gb|ERP61256.1| hypothetical protein
            POPTR_0005s15690g [Populus trichocarpa]
          Length = 563

 Score =  559 bits (1441), Expect = e-156
 Identities = 302/489 (61%), Positives = 355/489 (72%), Gaps = 4/489 (0%)
 Frame = -1

Query: 2371 MEDSRKFFLKKRPNPQFDAKG--GIKRGKWQNSSLEQSLEDSRTPETVYRILCQSXXXXX 2198
            M+ +R+ + KK  N  F  KG    ++GKW +S  E+   D    +TVYRILC S     
Sbjct: 1    MDGNRRKYFKKPGNNLFKRKGVSSSRKGKWSDSHGEECSGDG---DTVYRILCPSRKIGG 57

Query: 2197 XXXXXXXXXKALREETQAKITVADPVPGSDDRVIVILSPSTKSARRKTIDNAEDNQDNKE 2018
                     KALREETQ+KITVAD V GSD+RVI+I S S K  R+   D      + ++
Sbjct: 58   VIGKGGNIVKALREETQSKITVADSVQGSDERVIIIYSSSDKPPRKMDGDEGLPAGNGQQ 117

Query: 2017 DNIVMELHCAAQDALLKVHDRIVEEDI-GGAESYSENEI-VVTARLLVPNNMVGCLLGKK 1844
            +    E HCAAQDALLKVHDRIVEED+ GG  S  +N+  VVTARLLVPNNMVGC+LGK+
Sbjct: 118  E--AFEPHCAAQDALLKVHDRIVEEDLFGGMASDDDNDNNVVTARLLVPNNMVGCVLGKR 175

Query: 1843 GDVIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEVSTLLHRNPRK 1664
            GDVIQRLRSET ANIRVLPADHLPSCA+ +DELVQISGKP + K+ALYE+S LLH+NPRK
Sbjct: 176  GDVIQRLRSETGANIRVLPADHLPSCAMDTDELVQISGKPAVAKRALYEISILLHQNPRK 235

Query: 1663 DKPPLSFPLAHGTQNFHPPGPPTANMLPQGSSAWSRHNPNEQGRTKPWAERFRNEPSGFG 1484
            DK P S P+ +G + FHPP    ANMLP G+  W   N      + PW   + N PS FG
Sbjct: 236  DKLP-SVPMPYGGRTFHPPSDSMANMLPPGNPMWPHRNSTPH--SMPWMGEYGNHPSEFG 292

Query: 1483 PAEFDGFPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVENVSPE 1304
            P  F+G PP  G E   EFS+KILC + KIGGVIGKGG NV+ +QQETGASI VE+ S E
Sbjct: 293  PGGFNGVPPGHGREPSAEFSMKILCSTGKIGGVIGKGGSNVKIVQQETGASIHVEDASAE 352

Query: 1303 SDDRVIRASSIEALWDPRSQTIEAILHLQNKTSELNEKGIITTRLLVPSNKVGCILGQGG 1124
            S++R IR S+ E LW+PRSQTI+AIL LQ+KTS+ +EKG+I TRLLVPS+KVGCILGQGG
Sbjct: 353  SEERAIRVSAFEGLWNPRSQTIDAILQLQDKTSDFSEKGMIITRLLVPSSKVGCILGQGG 412

Query: 1123 HVINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVAKDALAEIASRLRMRCLRD 944
             VINEMRRR QADIRV+ K DKPKCASDDEELVQISGNY VAKDALAEIASRLR R LRD
Sbjct: 413  QVINEMRRRLQADIRVYPKNDKPKCASDDEELVQISGNYGVAKDALAEIASRLRARTLRD 472

Query: 943  ASSKGEPAP 917
            A++  EP P
Sbjct: 473  ANAGTEPGP 481


>gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
          Length = 569

 Score =  530 bits (1364), Expect = e-147
 Identities = 286/472 (60%), Positives = 338/472 (71%), Gaps = 17/472 (3%)
 Frame = -1

Query: 2371 MEDSRKFFLKKRPNPQFDAKG--GIKRGKWQNSSLEQSLEDSRTPETVYRILCQSXXXXX 2198
            M+ S++ F KKRPN QF  KG  GIK+G W NSS EQS  +S+  +TVYRILC S     
Sbjct: 1    MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60

Query: 2197 XXXXXXXXXKALREETQAKITVADPVPGSDDRVIVILSPSTKSARRKTIDNAEDNQDNKE 2018
                     K+LREETQAKITVAD +PGS++RVI+I S  TK A+ +  D+    +  KE
Sbjct: 61   VIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 120

Query: 2017 DNIVMELHCAAQDALLKVHDRIVEEDI-GGAESYSENE-IVVTARLLVPNNMVGCLLGKK 1844
                ME HCAAQDALLKVHDRI+EED+ GG  S  +NE   +TARLLVPNNMVGCLLGK+
Sbjct: 121  S---MEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKR 177

Query: 1843 GDVIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEVSTLLHRNPRK 1664
            GDVIQRLRSET ANIRVLPAD LP CA+++DE+VQISGKP + K+ALYEVSTLLH+NPRK
Sbjct: 178  GDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRK 237

Query: 1663 DKPPLSFPLAHGTQNFHPPGPPTANMLPQGSSAWSRHNPNEQGR-TKPWAERFRNEPSGF 1487
            DKPP SFP A+G QNFH P  P A+M P G+S+W   N +  G  + PW   + ++PS  
Sbjct: 238  DKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRM 297

Query: 1486 GPAEFDGFPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVENVSP 1307
            G    +  PP + GE   EFS+KILC + KIGGVIGKGGFNV+QLQQETGASI VE+   
Sbjct: 298  GSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPT 357

Query: 1306 ESDDRVIRASSIEALWDPRSQTIEAILHLQNKTSELNEKGIITTRLLVPSNKVGCILGQG 1127
            +SD+RVIRAS+ E LW+PRSQTI+AIL LQNKTSE +EKG ITTRLLVPS+KVGCILGQG
Sbjct: 358  DSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQG 417

Query: 1126 GHVINEMRRRTQADIRVFSKEDK--------PKCASD----DEELVQISGNY 1007
            GHVINEMRRRTQADIRV     K         +C  D     E L+   G Y
Sbjct: 418  GHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY 469



 Score =  116 bits (291), Expect = 4e-23
 Identities = 76/208 (36%), Positives = 105/208 (50%), Gaps = 30/208 (14%)
 Frame = -1

Query: 1456 SRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVENVSPESDDRVI--- 1286
            S G   P +   +ILCPS KIGGVIGK G  V+ L++ET A I V +  P S++RVI   
Sbjct: 38   SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIY 97

Query: 1285 ----------------RASSIEALWDPRSQTIEAILHLQNKTSEL-----------NEKG 1187
                             A + +   +P     +A+L + ++  E            NE  
Sbjct: 98   SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 157

Query: 1186 IITTRLLVPSNKVGCILGQGGHVINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNY 1007
             IT RLLVP+N VGC+LG+ G VI  +R  T A+IRV   +  P CA + +E+VQISG  
Sbjct: 158  TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 217

Query: 1006 AVAKDALAEIASRLRMRCLRDASSKGEP 923
             VAK AL E+++ L     +D      P
Sbjct: 218  NVAKRALYEVSTLLHQNPRKDKPPSSFP 245


>gb|EOY04207.1| RNA-binding KH domain-containing protein isoform 6, partial
            [Theobroma cacao]
          Length = 530

 Score =  439 bits (1128), Expect = e-120
 Identities = 244/468 (52%), Positives = 304/468 (64%), Gaps = 11/468 (2%)
 Frame = -1

Query: 1741 QISGKPVIVKKALYEVSTLLHRNPRKDKPPLSFPLAHGTQNFHPPGPPTANMLPQGSSAW 1562
            +ISGK  + K+ALYEVSTLLH+NPRKD PPLSFP+ H  QNF PP     + +P  +  W
Sbjct: 39   KISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVPHAGQNFPPP-----SAIPPSNPMW 93

Query: 1561 SRHNPNEQG-RTKPWAERFRNEPSGFGPAEFDGFPPSRGGEAPIEFSLKILCPSAKIGGV 1385
            S  N +     + PW     N PSGFGP     FPP+RG EA  EFS+KILCP+ KIGGV
Sbjct: 94   SHRNSSPHDIPSMPWMVPHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGV 153

Query: 1384 IGKGGFNVRQLQQETGASIQVENVSPESDDRVIRASSIEALWDPRSQTIEAILHLQNKTS 1205
            IGKGGFNV+QLQQETGA I VE+ + ESD+RVIR S+IE LW+PRSQTI+AIL LQNKTS
Sbjct: 154  IGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTS 213

Query: 1204 ELNEKGIITTRLLVPSNKVGCILGQGGHVINEMRRRTQADIRVFSKEDKPKCASDDEELV 1025
            E +EKG +TTRLLVPS+KVGCILGQGGHVINEMRRRTQADIRV+SK+DKPKCAS+DEELV
Sbjct: 214  EFSEKGTVTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELV 273

Query: 1024 QISGNYAVAKDALAEIASRLRMRCLRDASSKGEPAPTRSXXXXXXXXXXXXXXXXXXGAT 845
            QISGN+ VAKDALAEIASRLR+R LRD ++  E AP                      A 
Sbjct: 274  QISGNFGVAKDALAEIASRLRVRTLRDVNAGAETAPV-GPVNGFGPARSMADGLPPAAAI 332

Query: 844  GVGSLGRYDHYK--DXXXXXXXXXXXXXPTAIGYPGVNG--DRRIRNDIADSIGGAGASN 677
            G G  G Y+ ++                P A+ Y  +NG  + +I N+++ S+ G G S 
Sbjct: 333  GPGRSGGYESFRGGGGREYEPQNNYSVPPAAVRYSNMNGALEAKILNNMSSSVTGTGGST 392

Query: 676  M--SEIMGTRLKLHGHHAAGSEHLVDIRRSPGHLSGSHNMFPPFGSSSGHNSHNLQDPYQ 503
            +  SE+ G R++L      GSE   + R S  HL+ + ++F  F  SSG + +  Q  YQ
Sbjct: 393  ILNSEVSGARVRLEDPQTGGSE---EFRGSSEHLTAAQSIFQSFMPSSGQSMNAQQSSYQ 449

Query: 502  NFNTQQAVHQSINPS---YPNFSPSLASYQN-IPPQPTPYQNSSAQGS 371
            N + QQ+ + ++N     YPN +   + YQN  P Q +PYQN S Q S
Sbjct: 450  NLSVQQSSYLNMNAQRSPYPNMNAQQSPYQNRHPHQSSPYQNLSVQQS 497



 Score = 81.6 bits (200), Expect = 2e-12
 Identities = 87/311 (27%), Positives = 134/311 (43%), Gaps = 6/311 (1%)
 Frame = -1

Query: 2230 RILCQSXXXXXXXXXXXXXXKALREETQAKITVADPVPGSDDRVIVILS-PSTKSARRKT 2054
            +ILC +              K L++ET A I V D    SD+RVI + +     + R +T
Sbjct: 142  KILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSAIEGLWNPRSQT 201

Query: 2053 IDNAEDNQDNKEDNIVMELHCAAQDALLKVHDRIVEEDIGGAESYSENEIVVTARLLVPN 1874
            ID                       A+L++ ++  E        +SE    VT RLLVP+
Sbjct: 202  ID-----------------------AILQLQNKTSE--------FSEKG-TVTTRLLVPS 229

Query: 1873 NMVGCLLGKKGDVIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEV 1694
            + VGC+LG+ G VI  +R  T+A+IRV   D  P CA   +ELVQISG   + K AL E+
Sbjct: 230  SKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALAEI 289

Query: 1693 STLLHRNPRKDKPPLSFPLAHGTQNFHPPGPPTANMLPQGSSAWSRHNPNEQGRTKPWAE 1514
            ++ L     +D    +     G  N   P    A+ LP  ++      P   G      E
Sbjct: 290  ASRLRVRTLRDVNAGAETAPVGPVNGFGPARSMADGLPPAAAI----GPGRSG----GYE 341

Query: 1513 RFRNEPSGFGPAEFD-----GFPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQ 1349
             FR    G G  E++       PP+    + +  +L+    +     V G GG  +    
Sbjct: 342  SFR----GGGGREYEPQNNYSVPPAAVRYSNMNGALEAKILNNMSSSVTGTGGSTILN-S 396

Query: 1348 QETGASIQVEN 1316
            + +GA +++E+
Sbjct: 397  EVSGARVRLED 407


>ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g18375-like [Oryza
            brachyantha]
          Length = 773

 Score =  386 bits (992), Expect = e-104
 Identities = 241/484 (49%), Positives = 303/484 (62%), Gaps = 8/484 (1%)
 Frame = -1

Query: 2344 KKRPNPQFDAKGGIKRGKWQNSSLEQSLEDSRTPETVYRILCQSXXXXXXXXXXXXXXKA 2165
            +KRP+   D +    + K  N+  +     S+  ET+YRILC                KA
Sbjct: 15   RKRPHSNSDDR----KRKRLNTKHDDGSMSSQPTETIYRILCPVKKIGSVLGRGGDVVKA 70

Query: 2164 LREETQAKITVADPVPGSDDRVIVILSPSTKSARRKTIDN-AEDNQDNKEDNIVMELHCA 1988
            LR+ET+AKI VAD +PG+D+RVI+I +  ++S   +   N + D   N      M+ HC 
Sbjct: 71   LRDETKAKIRVADSIPGADERVIIIFNYPSQSEDDEAAQNISTDGFQN------MKPHCF 124

Query: 1987 AQDALLKVHDRIVE-EDIGGAESYSENEIV--VTARLLVPNNMVGCLLGKKGDVIQRLRS 1817
            AQDALLK+HD+I E ED+ G   + ++E V  VTAR+LVP N VGCLLGK G +IQ+LR+
Sbjct: 125  AQDALLKIHDKIAEDEDLHGGIDHEKSETVDGVTARILVPGNQVGCLLGKGGSIIQQLRN 184

Query: 1816 ETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEVSTLLHRNPRKDKPPLSFPL 1637
            ET A IRVLP+++LP CAL SDELVQISG P +V+KALYE+ST LH++PRKD PPL   +
Sbjct: 185  ETGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKDNPPLEEII 244

Query: 1636 AHGTQNFH--PPGPPTAN-MLPQGSSAWSRHNPNEQGRTKPWAERFRNEPSGFGPAEFDG 1466
               TQ  H  PP  P AN MLP        H   +     P  + +RN P  +       
Sbjct: 245  DASTQRKHQSPPQLPHANPMLP--------HLHVDHSPQIPLLDPYRNGPLRY------- 289

Query: 1465 FPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVENVSPE-SDDRV 1289
                  GEA  EFS+KILC S  IG VIGK G NVRQ++Q+TGA IQV+ V    S +R+
Sbjct: 290  ----HAGEAE-EFSIKILCASEHIGQVIGKSGGNVRQVEQQTGARIQVKEVGKNASGERL 344

Query: 1288 IRASSIEALWDPRSQTIEAILHLQNKTSELNEKGIITTRLLVPSNKVGCILGQGGHVINE 1109
            I  SS E   DP S TIEA++ L +K S   E   +TTRL+VPSNKVGCILG+GG VI E
Sbjct: 345  IVVSSQEIPDDPVSPTIEALILLHSKVSAPAENRHLTTRLVVPSNKVGCILGEGGKVITE 404

Query: 1108 MRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVAKDALAEIASRLRMRCLRDASSKG 929
            MRRRT A+IRV+SK DKPK  S DEELVQ++G  A+A+ AL EIASRLR R LRD SS  
Sbjct: 405  MRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSSSN 464

Query: 928  EPAP 917
             P P
Sbjct: 465  NPPP 468


>gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica Group]
          Length = 677

 Score =  381 bits (978), Expect = e-102
 Identities = 237/484 (48%), Positives = 300/484 (61%), Gaps = 10/484 (2%)
 Frame = -1

Query: 2338 RPNPQFDAKGGIKRGKWQNSSLEQSLEDSRTPETVYRILCQSXXXXXXXXXXXXXXKALR 2159
            R  P F++  G  + K  NS  +     S   ET+YRILC                KALR
Sbjct: 15   RKRPHFNSDDG--KRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIVKALR 72

Query: 2158 EETQAKITVADPVPGSDDRVIVILSPSTKS---ARRKTIDNAEDNQDNKEDNIVMELHCA 1988
            + T+AKI VAD +PG+D+RVI+I + S+++   A+  + D  ED          M+ HC 
Sbjct: 73   DTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDGFED----------MKPHCF 122

Query: 1987 AQDALLKVHDRIV-EEDI--GGAESYSENEIVVTARLLVPNNMVGCLLGKKGDVIQRLRS 1817
            AQDALLK+HD+I  +ED+  G     SEN   V AR+LVP N VGCLLGK G +IQ+LR+
Sbjct: 123  AQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRN 182

Query: 1816 ETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEVSTLLHRNPRKDKPPLSFPL 1637
            +T A IRVLP+++LP CAL SDELVQISG   +V+KALYE+ST LH++PRKD PPL   +
Sbjct: 183  DTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEII 242

Query: 1636 AHGTQNFH--PPGPPTAN-MLPQGSSAWSRHNPNEQGRTKPWAERFRNEPSGFGPAEFDG 1466
               TQ  H  PP  P AN MLP        H   +     P  + +RN P  +  AE + 
Sbjct: 243  DASTQRKHQAPPQLPHANPMLP--------HLHVDHSPQIPLLDPYRNRPLQYHSAEAE- 293

Query: 1465 FPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVENVSPE-SDDRV 1289
                       EFS+KILC S  IG VIGK G NVRQ++Q+TGA +QV+ V    S++R+
Sbjct: 294  -----------EFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERL 342

Query: 1288 IRASSIEALWDPRSQTIEAILHLQNKTSELNEKGIITTRLLVPSNKVGCILGQGGHVINE 1109
            I  SS E   DP S TIEA++ L +K S L E   +TTRL+VPSNKVGCI+G+GG VI E
Sbjct: 343  IVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVPSNKVGCIIGEGGKVITE 402

Query: 1108 MRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVAKDALAEIASRLRMRCLRDASSKG 929
            MRRRT A+IRV+SK DKPK  S DEELVQ++G  A+A+ AL EIASRLR R LRD SS  
Sbjct: 403  MRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSSSN 462

Query: 928  EPAP 917
             P P
Sbjct: 463  NPTP 466


>ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group] gi|22128716|gb|AAM92828.1|
            putative RNA-binding protein [Oryza sativa Japonica
            Group] gi|110289325|gb|ABB47821.2| KH domain containing
            protein, expressed [Oryza sativa Japonica Group]
            gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa
            Japonica Group] gi|215694845|dbj|BAG90036.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 762

 Score =  381 bits (978), Expect = e-102
 Identities = 237/484 (48%), Positives = 300/484 (61%), Gaps = 10/484 (2%)
 Frame = -1

Query: 2338 RPNPQFDAKGGIKRGKWQNSSLEQSLEDSRTPETVYRILCQSXXXXXXXXXXXXXXKALR 2159
            R  P F++  G  + K  NS  +     S   ET+YRILC                KALR
Sbjct: 15   RKRPHFNSDDG--KRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIVKALR 72

Query: 2158 EETQAKITVADPVPGSDDRVIVILSPSTKS---ARRKTIDNAEDNQDNKEDNIVMELHCA 1988
            + T+AKI VAD +PG+D+RVI+I + S+++   A+  + D  ED          M+ HC 
Sbjct: 73   DTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDGFED----------MKPHCF 122

Query: 1987 AQDALLKVHDRIV-EEDI--GGAESYSENEIVVTARLLVPNNMVGCLLGKKGDVIQRLRS 1817
            AQDALLK+HD+I  +ED+  G     SEN   V AR+LVP N VGCLLGK G +IQ+LR+
Sbjct: 123  AQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRN 182

Query: 1816 ETRANIRVLPADHLPSCALSSDELVQISGKPVIVKKALYEVSTLLHRNPRKDKPPLSFPL 1637
            +T A IRVLP+++LP CAL SDELVQISG   +V+KALYE+ST LH++PRKD PPL   +
Sbjct: 183  DTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEII 242

Query: 1636 AHGTQNFH--PPGPPTAN-MLPQGSSAWSRHNPNEQGRTKPWAERFRNEPSGFGPAEFDG 1466
               TQ  H  PP  P AN MLP        H   +     P  + +RN P  +  AE + 
Sbjct: 243  DASTQRKHQAPPQLPHANPMLP--------HLHVDHSPQIPLLDPYRNRPLQYHSAEAE- 293

Query: 1465 FPPSRGGEAPIEFSLKILCPSAKIGGVIGKGGFNVRQLQQETGASIQVENVSPE-SDDRV 1289
                       EFS+KILC S  IG VIGK G NVRQ++Q+TGA +QV+ V    S++R+
Sbjct: 294  -----------EFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERL 342

Query: 1288 IRASSIEALWDPRSQTIEAILHLQNKTSELNEKGIITTRLLVPSNKVGCILGQGGHVINE 1109
            I  SS E   DP S TIEA++ L +K S L E   +TTRL+VPSNKVGCI+G+GG VI E
Sbjct: 343  IVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVPSNKVGCIIGEGGKVITE 402

Query: 1108 MRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVAKDALAEIASRLRMRCLRDASSKG 929
            MRRRT A+IRV+SK DKPK  S DEELVQ++G  A+A+ AL EIASRLR R LRD SS  
Sbjct: 403  MRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSSSN 462

Query: 928  EPAP 917
             P P
Sbjct: 463  NPTP 466