BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00005949
         (1602 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006353009.1| PREDICTED: KRR1 small subunit processome com...   504   e-140
ref|XP_004233160.1| PREDICTED: KRR1 small subunit processome com...   500   e-139
emb|CBI22501.3| unnamed protein product [Vitis vinifera]              494   e-137
ref|XP_002271394.1| PREDICTED: ribosomal RNA assembly protein mi...   494   e-137
ref|XP_003519473.1| PREDICTED: KRR1 small subunit processome com...   477   e-132
ref|NP_001241422.1| uncharacterized protein LOC100816856 [Glycin...   476   e-131
ref|XP_006478051.1| PREDICTED: KRR1 small subunit processome com...   473   e-130
ref|XP_006441061.1| hypothetical protein CICLE_v10020638mg [Citr...   471   e-130
ref|XP_002513405.1| Ribosomal RNA assembly protein mis3, putativ...   471   e-130
gb|EOY32827.1| RNA-binding KH domain-containing protein [Theobro...   470   e-130
ref|XP_003617063.1| KRR1 small subunit processome component-like...   467   e-129
ref|XP_004159171.1| PREDICTED: KRR1 small subunit processome com...   465   e-128
gb|AFK40254.1| unknown [Medicago truncatula]                          465   e-128
gb|ESW13588.1| hypothetical protein PHAVU_008G209100g [Phaseolus...   461   e-127
ref|XP_004491161.1| PREDICTED: KRR1 small subunit processome com...   461   e-127
ref|XP_002310107.1| hypothetical protein POPTR_0007s08410g [Popu...   461   e-127
ref|XP_004491162.1| PREDICTED: KRR1 small subunit processome com...   456   e-125
ref|NP_001064737.1| Os10g0452800 [Oryza sativa Japonica Group] g...   455   e-125
gb|EEC67082.1| hypothetical protein OsI_33853 [Oryza sativa Indi...   452   e-124
ref|XP_002871325.1| hypothetical protein ARALYDRAFT_487679 [Arab...   452   e-124

>ref|XP_006353009.1| PREDICTED: KRR1 small subunit processome component homolog [Solanum
            tuberosum]
          Length = 382

 Score =  504 bits (1297), Expect = e-140
 Identities = 251/365 (68%), Positives = 289/365 (79%)
 Frame = -1

Query: 1329 RHKGKHDKPKPWDDESIDHWKIEKFDPSWNESGMLEVSSFSTLFPQYREKYLQECWPDVK 1150
            RHKGKHDKPKPWDDESIDHWKIEKFDPSWN+SG+LEVSSFSTLFPQYREKYLQECWP+VK
Sbjct: 18   RHKGKHDKPKPWDDESIDHWKIEKFDPSWNQSGLLEVSSFSTLFPQYREKYLQECWPNVK 77

Query: 1149 RALKEHGIACELNLIEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAAQAIKILNDEM 970
             ALKEHGIACELNL+EGSMTVSTT KTRDPYII+KARDLIKLLSRSVPA QA+KILNDEM
Sbjct: 78   GALKEHGIACELNLVEGSMTVSTTMKTRDPYIIVKARDLIKLLSRSVPAPQAVKILNDEM 137

Query: 969  QCDIIKIGNMVRNKERFVKRRQLLVGPNSANLKALEILTCCYILVQGNTVSAMGSFKGLK 790
            QCDIIKIGNMVRNKERFVKRRQ LVGPNS+ LKALEILT CYILVQGNTV+AMGSFKGLK
Sbjct: 138  QCDIIKIGNMVRNKERFVKRRQYLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLK 197

Query: 789  QVRRVVEDCMLNRLHPVFNIKILLMKRELAKDPTLANENWDRFLPTFXXXXXXXXXXXXX 610
            Q RRV+EDC+LN++HP+ +IKIL++KRELAK+P LA+ENWDRFLP F             
Sbjct: 198  QARRVIEDCILNKMHPLHHIKILMLKRELAKNPALASENWDRFLPQFKKKNVKQKKVQSK 257

Query: 609  XXXXXXXXXXXXXXXKVDLQLESGEYFLGDXXXXXXXXXXXXXXXXXQIVRNKRKREEAY 430
                           K+D QLESGEYFL D                 ++  NK+KREEA+
Sbjct: 258  EKKPYTPFPPPQPPSKIDQQLESGEYFLSDKKKMAKQWEEKQVKQAEKVAENKKKREEAF 317

Query: 429  IPPEEPGKHNSDASNRDGNDDNVAALALSVKEKAREFGKRKSVEKIDPQDYIASTGESSR 250
            +PPEEP  HN D SN D  +D+V A+A S+K KA+EF K+KS++KID +++IA   + S+
Sbjct: 318  VPPEEPKTHNQDVSNVD--EDDVTAMASSLKRKAKEFRKQKSIDKIDAEEFIAGPSKPSK 375

Query: 249  GKKSR 235
             KKS+
Sbjct: 376  -KKSK 379


>ref|XP_004233160.1| PREDICTED: KRR1 small subunit processome component homolog [Solanum
            lycopersicum]
          Length = 382

 Score =  500 bits (1287), Expect = e-139
 Identities = 250/365 (68%), Positives = 287/365 (78%)
 Frame = -1

Query: 1329 RHKGKHDKPKPWDDESIDHWKIEKFDPSWNESGMLEVSSFSTLFPQYREKYLQECWPDVK 1150
            RHKGKHDKPKPWDDESIDHWKIEKFDPSWN+SG+LEVSSFSTLFPQYREKYLQECWP VK
Sbjct: 18   RHKGKHDKPKPWDDESIDHWKIEKFDPSWNQSGLLEVSSFSTLFPQYREKYLQECWPTVK 77

Query: 1149 RALKEHGIACELNLIEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAAQAIKILNDEM 970
             ALKEHGIACELNL+EGSMTVSTT KTRDPYII+KARDLIKLLSRSVPA QA+KILNDEM
Sbjct: 78   GALKEHGIACELNLVEGSMTVSTTMKTRDPYIIVKARDLIKLLSRSVPAPQAVKILNDEM 137

Query: 969  QCDIIKIGNMVRNKERFVKRRQLLVGPNSANLKALEILTCCYILVQGNTVSAMGSFKGLK 790
            QCDIIKIGNMVRNKERFVKRRQ LVGPNS+ LKALEILT CYILVQGNTV+AMGSFKGLK
Sbjct: 138  QCDIIKIGNMVRNKERFVKRRQYLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLK 197

Query: 789  QVRRVVEDCMLNRLHPVFNIKILLMKRELAKDPTLANENWDRFLPTFXXXXXXXXXXXXX 610
            Q RRV+EDC+LN++HP+ +IKIL++KRELAK+P LA+ENWDRFLP F             
Sbjct: 198  QARRVIEDCILNKMHPLHHIKILMLKRELAKNPALASENWDRFLPQFKKKNVKQKKVQSK 257

Query: 609  XXXXXXXXXXXXXXXKVDLQLESGEYFLGDXXXXXXXXXXXXXXXXXQIVRNKRKREEAY 430
                           K+D QLESGEYFL D                 ++  NK+KREEA+
Sbjct: 258  EKKPYTPFPPPQPPSKIDQQLESGEYFLSDKKKMAKQWEEKQVKQAEKVAENKKKREEAF 317

Query: 429  IPPEEPGKHNSDASNRDGNDDNVAALALSVKEKAREFGKRKSVEKIDPQDYIASTGESSR 250
            +PPEEP  HN D SN D   D+V A+A S+K KA+EF K+KS++KI+ +++IA   + S+
Sbjct: 318  VPPEEPKTHNQDVSNVD--KDDVTAMASSLKRKAKEFRKQKSIDKINAEEFIAGPSKPSK 375

Query: 249  GKKSR 235
             KKS+
Sbjct: 376  -KKSK 379


>emb|CBI22501.3| unnamed protein product [Vitis vinifera]
          Length = 424

 Score =  494 bits (1272), Expect = e-137
 Identities = 254/387 (65%), Positives = 292/387 (75%)
 Frame = -1

Query: 1389 KMETANGEVEWEEQKTKEVTRHKGKHDKPKPWDDESIDHWKIEKFDPSWNESGMLEVSSF 1210
            +ME +NGEVE E    KE T+HKGKHDKPKPWDD SIDHWK++KFDPSWNE GMLEVSSF
Sbjct: 38   EMEESNGEVEVER---KEKTKHKGKHDKPKPWDDPSIDHWKVDKFDPSWNEGGMLEVSSF 94

Query: 1209 STLFPQYREKYLQECWPDVKRALKEHGIACELNLIEGSMTVSTTRKTRDPYIIIKARDLI 1030
            STLFPQYREKYLQE WP V+ ALKE G+  ELNL+EG MTVSTTRKTRDPYII+KARDLI
Sbjct: 95   STLFPQYREKYLQEAWPTVRGALKEFGVKSELNLVEGCMTVSTTRKTRDPYIIMKARDLI 154

Query: 1029 KLLSRSVPAAQAIKILNDEMQCDIIKIGNMVRNKERFVKRRQLLVGPNSANLKALEILTC 850
            KLLSRSVPA QAIKILNDEMQCDIIKIG++VRNKERFVKRRQ LVGPNS+ LKALEILT 
Sbjct: 155  KLLSRSVPAPQAIKILNDEMQCDIIKIGSLVRNKERFVKRRQHLVGPNSSTLKALEILTG 214

Query: 849  CYILVQGNTVSAMGSFKGLKQVRRVVEDCMLNRLHPVFNIKILLMKRELAKDPTLANENW 670
            CYILVQGNTV+AMGSFKGLKQVRRVVEDC+ N++HPV++IK L+MKRELA DP L NENW
Sbjct: 215  CYILVQGNTVAAMGSFKGLKQVRRVVEDCIQNKMHPVYHIKTLMMKRELASDPALENENW 274

Query: 669  DRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDLQLESGEYFLGDXXXXXXXXXX 490
            DRFLP F                            KVDLQLESGEYFL D          
Sbjct: 275  DRFLPKFKKKNVKQKKVKSKEKKPYTPFPPPQPPSKVDLQLESGEYFLSDQKKFAKKWQQ 334

Query: 489  XXXXXXXQIVRNKRKREEAYIPPEEPGKHNSDASNRDGNDDNVAALALSVKEKAREFGKR 310
                   +   NKRKRE A++PP EP   +   S  D ND  VAA+A+S+K+KA+EFGK+
Sbjct: 335  KLEKQAEKTAENKRKREAAFVPPMEPMVQDPSKSADDKND--VAAMAMSLKKKAKEFGKQ 392

Query: 309  KSVEKIDPQDYIASTGESSRGKKSRRN 229
            KS+E ++P+ YIA++GE+   KK + +
Sbjct: 393  KSLENVNPETYIAASGEAPSKKKRKHS 419


>ref|XP_002271394.1| PREDICTED: ribosomal RNA assembly protein mis3-like [Vitis vinifera]
          Length = 386

 Score =  494 bits (1271), Expect = e-137
 Identities = 254/386 (65%), Positives = 291/386 (75%)
 Frame = -1

Query: 1386 METANGEVEWEEQKTKEVTRHKGKHDKPKPWDDESIDHWKIEKFDPSWNESGMLEVSSFS 1207
            ME +NGEVE E    KE T+HKGKHDKPKPWDD SIDHWK++KFDPSWNE GMLEVSSFS
Sbjct: 1    MEESNGEVEVER---KEKTKHKGKHDKPKPWDDPSIDHWKVDKFDPSWNEGGMLEVSSFS 57

Query: 1206 TLFPQYREKYLQECWPDVKRALKEHGIACELNLIEGSMTVSTTRKTRDPYIIIKARDLIK 1027
            TLFPQYREKYLQE WP V+ ALKE G+  ELNL+EG MTVSTTRKTRDPYII+KARDLIK
Sbjct: 58   TLFPQYREKYLQEAWPTVRGALKEFGVKSELNLVEGCMTVSTTRKTRDPYIIMKARDLIK 117

Query: 1026 LLSRSVPAAQAIKILNDEMQCDIIKIGNMVRNKERFVKRRQLLVGPNSANLKALEILTCC 847
            LLSRSVPA QAIKILNDEMQCDIIKIG++VRNKERFVKRRQ LVGPNS+ LKALEILT C
Sbjct: 118  LLSRSVPAPQAIKILNDEMQCDIIKIGSLVRNKERFVKRRQHLVGPNSSTLKALEILTGC 177

Query: 846  YILVQGNTVSAMGSFKGLKQVRRVVEDCMLNRLHPVFNIKILLMKRELAKDPTLANENWD 667
            YILVQGNTV+AMGSFKGLKQVRRVVEDC+ N++HPV++IK L+MKRELA DP L NENWD
Sbjct: 178  YILVQGNTVAAMGSFKGLKQVRRVVEDCIQNKMHPVYHIKTLMMKRELASDPALENENWD 237

Query: 666  RFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDLQLESGEYFLGDXXXXXXXXXXX 487
            RFLP F                            KVDLQLESGEYFL D           
Sbjct: 238  RFLPKFKKKNVKQKKVKSKEKKPYTPFPPPQPPSKVDLQLESGEYFLSDQKKFAKKWQQK 297

Query: 486  XXXXXXQIVRNKRKREEAYIPPEEPGKHNSDASNRDGNDDNVAALALSVKEKAREFGKRK 307
                  +   NKRKRE A++PP EP   +   S  D ND  VAA+A+S+K+KA+EFGK+K
Sbjct: 298  LEKQAEKTAENKRKREAAFVPPMEPMVQDPSKSADDKND--VAAMAMSLKKKAKEFGKQK 355

Query: 306  SVEKIDPQDYIASTGESSRGKKSRRN 229
            S+E ++P+ YIA++GE+   KK + +
Sbjct: 356  SLENVNPETYIAASGEAPSKKKRKHS 381


>ref|XP_003519473.1| PREDICTED: KRR1 small subunit processome component homolog [Glycine
            max]
          Length = 389

 Score =  477 bits (1227), Expect = e-132
 Identities = 247/388 (63%), Positives = 288/388 (74%), Gaps = 1/388 (0%)
 Frame = -1

Query: 1392 VKMETANGEVEWEEQKTKEVTRHKGKHDKPKPWDDE-SIDHWKIEKFDPSWNESGMLEVS 1216
            +  E  NG V  E Q  ++  + KGKHDKPKPWDD+ +IDHWKIEKFDPSWN+ GMLEVS
Sbjct: 3    IHSEEENG-VANESQALEQKEKRKGKHDKPKPWDDDPNIDHWKIEKFDPSWNDGGMLEVS 61

Query: 1215 SFSTLFPQYREKYLQECWPDVKRALKEHGIACELNLIEGSMTVSTTRKTRDPYIIIKARD 1036
            SFSTLFPQYREKYLQE WP VK ALKE G+ACELNL+EGSMTVSTTRKTRDPYIIIKARD
Sbjct: 62   SFSTLFPQYREKYLQEAWPMVKSALKEFGVACELNLVEGSMTVSTTRKTRDPYIIIKARD 121

Query: 1035 LIKLLSRSVPAAQAIKILNDEMQCDIIKIGNMVRNKERFVKRRQLLVGPNSANLKALEIL 856
            LIKLLSRS+PA QAIKIL+DEMQCDIIKI  MVRNKERFVKRRQ LVGPNS+ LKALEIL
Sbjct: 122  LIKLLSRSLPAPQAIKILDDEMQCDIIKISGMVRNKERFVKRRQHLVGPNSSTLKALEIL 181

Query: 855  TCCYILVQGNTVSAMGSFKGLKQVRRVVEDCMLNRLHPVFNIKILLMKRELAKDPTLANE 676
            T CYILVQGNTV+AMGSFKGLKQVRR+VE+CMLN++HPV+NIK+L+MK+EL KDP LA E
Sbjct: 182  TGCYILVQGNTVAAMGSFKGLKQVRRIVEECMLNKMHPVYNIKVLMMKKELEKDPALAQE 241

Query: 675  NWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDLQLESGEYFLGDXXXXXXXX 496
            NWDRFLP F                            K+D+QLE+GEYFL +        
Sbjct: 242  NWDRFLPKFKKKNVKQKKVNTKQKKPYTPFPPPQQPSKIDIQLETGEYFLSNKRKSAKIW 301

Query: 495  XXXXXXXXXQIVRNKRKREEAYIPPEEPGKHNSDASNRDGNDDNVAALALSVKEKAREFG 316
                     +   NKRKREEA+IPP+EP   N    + D N  NVA +A+S+K+K ++FG
Sbjct: 302  QEKQEKQAEKTAENKRKREEAFIPPKEPA--NLVDKSEDAN-SNVADMAMSLKKKTKKFG 358

Query: 315  KRKSVEKIDPQDYIASTGESSRGKKSRR 232
            KRKS E I+ + YI  + E + GKKS++
Sbjct: 359  KRKSEENINAETYIIGSSEQASGKKSKK 386


>ref|NP_001241422.1| uncharacterized protein LOC100816856 [Glycine max]
            gi|255639399|gb|ACU19995.1| unknown [Glycine max]
          Length = 389

 Score =  476 bits (1224), Expect = e-131
 Identities = 242/379 (63%), Positives = 285/379 (75%), Gaps = 1/379 (0%)
 Frame = -1

Query: 1365 VEWEEQKTKEVTRHKGKHDKPKPWDDE-SIDHWKIEKFDPSWNESGMLEVSSFSTLFPQY 1189
            VE E +  ++  + KGKHDKPKPWDD+ +IDHWKI+KFDPSWN+ GMLEVSSFSTLFPQY
Sbjct: 11   VEEEPRSLEQKEKRKGKHDKPKPWDDDPNIDHWKIDKFDPSWNDGGMLEVSSFSTLFPQY 70

Query: 1188 REKYLQECWPDVKRALKEHGIACELNLIEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSV 1009
            REKYLQE WP VK +LKE G+ACELNL+EGSMTVSTTRKTRDPYIIIKARDLIKLLSRS+
Sbjct: 71   REKYLQEAWPMVKSSLKEFGVACELNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSI 130

Query: 1008 PAAQAIKILNDEMQCDIIKIGNMVRNKERFVKRRQLLVGPNSANLKALEILTCCYILVQG 829
            PA QAIKIL+DEMQCDIIKI  MVRNKERFVKRRQ LVGPNS+ LKALEILT CYILVQG
Sbjct: 131  PAPQAIKILDDEMQCDIIKISGMVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQG 190

Query: 828  NTVSAMGSFKGLKQVRRVVEDCMLNRLHPVFNIKILLMKRELAKDPTLANENWDRFLPTF 649
            NTV+AMGSFKGLKQVRR+VE+CMLN++HPV+NIK+L+MK+EL KDP LA ENWDRFLP F
Sbjct: 191  NTVAAMGSFKGLKQVRRIVEECMLNKMHPVYNIKVLMMKKELEKDPALAQENWDRFLPKF 250

Query: 648  XXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDLQLESGEYFLGDXXXXXXXXXXXXXXXXX 469
                                        K+D+QLE+GEYFL +                 
Sbjct: 251  KKKNVKQKKVNTKQKKPYTPFPPPQQPSKIDIQLETGEYFLSNKRKSAKIWQEKQEKQAE 310

Query: 468  QIVRNKRKREEAYIPPEEPGKHNSDASNRDGNDDNVAALALSVKEKAREFGKRKSVEKID 289
            +   NKRKREEA+IPP+EP   N    + D N +NVA +A+S+K+K ++FGKRKS E ID
Sbjct: 311  KTAENKRKREEAFIPPKEPA--NLVDKSEDAN-NNVADMAISLKKKTKKFGKRKSEENID 367

Query: 288  PQDYIASTGESSRGKKSRR 232
             + YI  + E + GKK ++
Sbjct: 368  AETYIVGSSEQASGKKPKK 386


>ref|XP_006478051.1| PREDICTED: KRR1 small subunit processome component homolog [Citrus
            sinensis]
          Length = 376

 Score =  473 bits (1216), Expect = e-130
 Identities = 241/367 (65%), Positives = 281/367 (76%), Gaps = 2/367 (0%)
 Frame = -1

Query: 1329 RHKGKHDKPKPWD-DESIDHWKIEKFDPSWNESGMLEVSSFSTLFPQYREKYLQECWPDV 1153
            +HKGKHDKPKPWD D +IDHWK+EKFDP WNE GMLEVSSFSTLFPQYREKYLQE WP V
Sbjct: 12   KHKGKHDKPKPWDEDPNIDHWKVEKFDPFWNEGGMLEVSSFSTLFPQYREKYLQEAWPMV 71

Query: 1152 KRALKEHGIACELNLIEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAAQAIKILNDE 973
            K ALKE+G++CELNL+EGSMTVSTTRKTRDPYII+KARDLI+LLSRSVPA QAIKIL+DE
Sbjct: 72   KGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILDDE 131

Query: 972  MQCDIIKIGNMVRNKERFVKRRQLLVGPNSANLKALEILTCCYILVQGNTVSAMGSFKGL 793
            MQCDIIKIGN+VRNKERFVKRRQ LVGPNS+ LKALEILT CYILVQGNTV+AMGSFKGL
Sbjct: 132  MQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGL 191

Query: 792  KQVRRVVEDCMLNRLHPVFNIKILLMKRELAKDPTLANENWDRFLPTFXXXXXXXXXXXX 613
            KQVRR+VEDCM N++HPV++IKIL++K+EL KDP LANENWDRFLP F            
Sbjct: 192  KQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKKVKS 251

Query: 612  XXXXXXXXXXXXXXXXKVDLQLESGEYFLGDXXXXXXXXXXXXXXXXXQIVRNKRKREEA 433
                            K+D  LESGEYFL +                 +   NKRKR+ A
Sbjct: 252  KEKKPYTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRKRDAA 311

Query: 432  YIPPEEPGKHNSDASNRDGNDDNVAALALSVKEKAREFGKRKSVEKIDPQDYIASTGES- 256
            +IPPEEP + NS  +    ND  VAA+A S+KEKA++  K+K  E I+P++YIA++GE  
Sbjct: 312  FIPPEEPSRQNSSEAEDKTND--VAAMAKSLKEKAKKLRKQKFAENINPEEYIAASGEKP 369

Query: 255  SRGKKSR 235
            S+ KKS+
Sbjct: 370  SKKKKSK 376


>ref|XP_006441061.1| hypothetical protein CICLE_v10020638mg [Citrus clementina]
            gi|557543323|gb|ESR54301.1| hypothetical protein
            CICLE_v10020638mg [Citrus clementina]
          Length = 376

 Score =  471 bits (1213), Expect = e-130
 Identities = 241/367 (65%), Positives = 281/367 (76%), Gaps = 2/367 (0%)
 Frame = -1

Query: 1329 RHKGKHDKPKPWD-DESIDHWKIEKFDPSWNESGMLEVSSFSTLFPQYREKYLQECWPDV 1153
            +HKGKHDKPKPWD D +IDHWK+EKFDP WNE GMLEVSSFSTLFPQYREKYLQE WP V
Sbjct: 12   KHKGKHDKPKPWDEDPNIDHWKVEKFDPFWNEGGMLEVSSFSTLFPQYREKYLQEAWPMV 71

Query: 1152 KRALKEHGIACELNLIEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAAQAIKILNDE 973
            K ALKE+G++CELNL+EGSMTVSTTRKTRDPYII+KARDLI+LLSRSVPA QAIKIL+DE
Sbjct: 72   KGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILDDE 131

Query: 972  MQCDIIKIGNMVRNKERFVKRRQLLVGPNSANLKALEILTCCYILVQGNTVSAMGSFKGL 793
            MQCDIIKIGN+VRNKERFVKRRQ LVGPNS+ LKALEILT CYILVQGNTV+AMGSFKGL
Sbjct: 132  MQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGL 191

Query: 792  KQVRRVVEDCMLNRLHPVFNIKILLMKRELAKDPTLANENWDRFLPTFXXXXXXXXXXXX 613
            KQVRR+VEDCM N++HPV++IKIL++K+EL KDP LANENWDRFLP F            
Sbjct: 192  KQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKKVKS 251

Query: 612  XXXXXXXXXXXXXXXXKVDLQLESGEYFLGDXXXXXXXXXXXXXXXXXQIVRNKRKREEA 433
                            K+D  LESGEYFL +                 +   NKRKR+ A
Sbjct: 252  KEKKPYTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRKRDAA 311

Query: 432  YIPPEEPGKHNSDASNRDGNDDNVAALALSVKEKAREFGKRKSVEKIDPQDYIASTGES- 256
            +IPPEEP + NS  +    ND  VAA+A S+KEKA++  K+K  E I+P++YIA++GE  
Sbjct: 312  FIPPEEPSRQNSCEAEDKTND--VAAMAKSLKEKAKKLRKQKFAENINPEEYIAASGEKP 369

Query: 255  SRGKKSR 235
            S+ KKS+
Sbjct: 370  SKKKKSK 376


>ref|XP_002513405.1| Ribosomal RNA assembly protein mis3, putative [Ricinus communis]
            gi|223547313|gb|EEF48808.1| Ribosomal RNA assembly
            protein mis3, putative [Ricinus communis]
          Length = 377

 Score =  471 bits (1211), Expect = e-130
 Identities = 240/372 (64%), Positives = 285/372 (76%), Gaps = 1/372 (0%)
 Frame = -1

Query: 1353 EQKTKEVTRHKGKHDKPKPWD-DESIDHWKIEKFDPSWNESGMLEVSSFSTLFPQYREKY 1177
            E +TK+  +HKGKHDKPKPWD D +ID WKIEKFDPSWNE GMLEVSSFSTLFPQYREKY
Sbjct: 4    EIETKK--KHKGKHDKPKPWDEDPNIDRWKIEKFDPSWNEGGMLEVSSFSTLFPQYREKY 61

Query: 1176 LQECWPDVKRALKEHGIACELNLIEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAAQ 997
            LQE WP VK A+KE+G+ACELNL+EGSMTVSTTRKTRDPYII+KARDLIKLLSRSVPA Q
Sbjct: 62   LQEVWPMVKSAIKEYGVACELNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQ 121

Query: 996  AIKILNDEMQCDIIKIGNMVRNKERFVKRRQLLVGPNSANLKALEILTCCYILVQGNTVS 817
            AIKIL+DEMQCDIIKIGN+VR KERFVKRRQ LVGPNS+ LKALEILT CYILVQGNTV+
Sbjct: 122  AIKILHDEMQCDIIKIGNLVRKKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVA 181

Query: 816  AMGSFKGLKQVRRVVEDCMLNRLHPVFNIKILLMKRELAKDPTLANENWDRFLPTFXXXX 637
            AMGSFKGLKQVR++VEDC+ N+LHPV++IKIL+MK+EL KDP L NENWDRFLP F    
Sbjct: 182  AMGSFKGLKQVRKIVEDCIQNKLHPVYHIKILMMKKELEKDPALQNENWDRFLPKFKKKN 241

Query: 636  XXXXXXXXXXXXXXXXXXXXXXXXKVDLQLESGEYFLGDXXXXXXXXXXXXXXXXXQIVR 457
                                    KVD +LESGEYFL +                 +   
Sbjct: 242  VKHNKVKRKEKKPYTPFPPEQQPSKVDRELESGEYFLNNQKKQAKKWQEKQERQAEKTAE 301

Query: 456  NKRKREEAYIPPEEPGKHNSDASNRDGNDDNVAALALSVKEKAREFGKRKSVEKIDPQDY 277
            NKRKR+ A++PPEE    + DA   +  +++VAA+ALS+K+KA++FGK+ +VE I+ ++Y
Sbjct: 302  NKRKRDTAFVPPEE--HRDQDAGKSEDKNNDVAAIALSIKKKAKDFGKKNAVENINAEEY 359

Query: 276  IASTGESSRGKK 241
            IA++GE  + KK
Sbjct: 360  IAASGELPKKKK 371


>gb|EOY32827.1| RNA-binding KH domain-containing protein [Theobroma cacao]
          Length = 445

 Score =  470 bits (1210), Expect = e-130
 Identities = 245/397 (61%), Positives = 293/397 (73%), Gaps = 1/397 (0%)
 Frame = -1

Query: 1416 TEGFGEKVVKMETANGEVEWEEQKTKEVTRHKGKHDKPKPWD-DESIDHWKIEKFDPSWN 1240
            ++GF E  VKME  N E E   Q+ K   +HKGKHDKPKPWD D +ID WKI+KFDPSWN
Sbjct: 53   SQGFLE--VKMEQENMEEEVNLQQKK---KHKGKHDKPKPWDEDPNIDRWKIDKFDPSWN 107

Query: 1239 ESGMLEVSSFSTLFPQYREKYLQECWPDVKRALKEHGIACELNLIEGSMTVSTTRKTRDP 1060
              G+LE+SSFST+FP+YREKYLQE WP VK ALKE+GIA ELNL+EGSMTVSTTRKTRDP
Sbjct: 108  PDGLLEISSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDP 167

Query: 1059 YIIIKARDLIKLLSRSVPAAQAIKILNDEMQCDIIKIGNMVRNKERFVKRRQLLVGPNSA 880
            YIIIKARDLIKLLSRSVPA QAIKIL+DEMQCDIIKIG++VRNKERFVKRRQ LVGPNS+
Sbjct: 168  YIIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGSLVRNKERFVKRRQRLVGPNSS 227

Query: 879  NLKALEILTCCYILVQGNTVSAMGSFKGLKQVRRVVEDCMLNRLHPVFNIKILLMKRELA 700
             LKALEILT CYILVQGNTV+AMG+FKGLKQVRR+VEDC+ N++HPV++IKIL+MK+EL 
Sbjct: 228  TLKALEILTSCYILVQGNTVAAMGAFKGLKQVRRIVEDCIENKMHPVYHIKILMMKKELE 287

Query: 699  KDPTLANENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDLQLESGEYFLGD 520
            KDPTL NENWDRFLP F                            K+D +LESGEYFL +
Sbjct: 288  KDPTLKNENWDRFLPKFKKKNVQTKKVKSKEKKPYTPFPPPQQPSKIDQELESGEYFLSE 347

Query: 519  XXXXXXXXXXXXXXXXXQIVRNKRKREEAYIPPEEPGKHNSDASNRDGNDDNVAALALSV 340
                             +   NKRKREE+++PP+EP K +S  S  D  D  VA L +S+
Sbjct: 348  KKKLAKKWQEKQEKQAQKTAENKRKREESFVPPKEPVKQDSRESENDKED--VAVLTMSL 405

Query: 339  KEKAREFGKRKSVEKIDPQDYIASTGESSRGKKSRRN 229
            K+KA+EFGK+KS + I+ ++YIA+       KK +++
Sbjct: 406  KQKAKEFGKQKSFQNINAEEYIAAPAGKQPLKKKKKS 442


>ref|XP_003617063.1| KRR1 small subunit processome component-like protein [Medicago
            truncatula] gi|355518398|gb|AET00022.1| KRR1 small
            subunit processome component-like protein [Medicago
            truncatula]
          Length = 424

 Score =  467 bits (1202), Expect = e-129
 Identities = 244/401 (60%), Positives = 289/401 (72%), Gaps = 4/401 (0%)
 Frame = -1

Query: 1422 RRTEGFGEKVVKMETANGEVEWEEQKTKEVTRHKGKHDKPKPWDDE-SIDHWKIEKFDPS 1246
            RRT   G    +   A  E +   +  K   + KGKHDKPKPWDD+ +IDHWK+EKFDPS
Sbjct: 29   RRTSQLGTPPKRYRKAMDENDVSNEVVKG--KKKGKHDKPKPWDDDPNIDHWKVEKFDPS 86

Query: 1245 WNESGMLEVSSFSTLFPQYREKYLQECWPDVKRALKEHGIACELNLIEGSMTVSTTRKTR 1066
            WNESGMLEVSSFSTLFPQYREKYLQE WP VK +LKE GI+ ELNL+EGSMTVSTTRKT+
Sbjct: 87   WNESGMLEVSSFSTLFPQYREKYLQEAWPLVKSSLKEFGISAELNLVEGSMTVSTTRKTK 146

Query: 1065 DPYIIIKARDLIKLLSRSVPAAQAIKILNDEMQCDIIKIGNMVRNKERFVKRRQLLVGPN 886
            DPYII+KARDLI+LLSRSVPA QAIK+L+DEMQCDIIKI  +VRNKERFVKRRQ LVGPN
Sbjct: 147  DPYIIVKARDLIRLLSRSVPAPQAIKVLDDEMQCDIIKISGLVRNKERFVKRRQHLVGPN 206

Query: 885  SANLKALEILTCCYILVQGNTVSAMGSFKGLKQVRRVVEDCMLNRLHPVFNIKILLMKRE 706
            S+ LKALEILT CYILVQGNTVS MGS+KGLKQVRR+VE+CMLN++HPV+NIKIL+MK+E
Sbjct: 207  SSTLKALEILTGCYILVQGNTVSVMGSYKGLKQVRRIVEECMLNKMHPVYNIKILMMKKE 266

Query: 705  LAKDPTLANENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDLQLESGEYFL 526
            L KDP LA ENWDRFLP F                            KVD+QLE+GEYFL
Sbjct: 267  LEKDPALAQENWDRFLPKFNKKNVKQKKVNAKPKKPYTPFPPPQQPSKVDIQLETGEYFL 326

Query: 525  GDXXXXXXXXXXXXXXXXXQIVRNKRKREEAYIPPEEPGK---HNSDASNRDGNDDNVAA 355
             D                 +   NKRKR+E+++PP+EP     ++ DASN      NVA 
Sbjct: 327  SDKKKSAKKWQERQVQQAEKTAENKRKRDESFVPPKEPANLVGNSEDASN------NVAE 380

Query: 354  LALSVKEKAREFGKRKSVEKIDPQDYIASTGESSRGKKSRR 232
            +A+S+KEKAR+FGKRKS E I+ + YI  + +    KKS++
Sbjct: 381  MAMSLKEKARKFGKRKSEENINAETYIMGSSDQPSKKKSKK 421


>ref|XP_004159171.1| PREDICTED: KRR1 small subunit processome component homolog [Cucumis
            sativus]
          Length = 379

 Score =  465 bits (1197), Expect = e-128
 Identities = 237/372 (63%), Positives = 282/372 (75%), Gaps = 1/372 (0%)
 Frame = -1

Query: 1353 EQKTKEVTRHKGKHDKPKPWD-DESIDHWKIEKFDPSWNESGMLEVSSFSTLFPQYREKY 1177
            EQ+ +  T+HKGKHDKPKPWD D +ID WK+EKFDPSWNE+GMLEVSSFSTLFP YREKY
Sbjct: 5    EQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKY 64

Query: 1176 LQECWPDVKRALKEHGIACELNLIEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAAQ 997
            L++ WP VK ALKE GI  ELNLIEGSMTVSTTRKTRDPYII+KARDLIKLLSRSVPA Q
Sbjct: 65   LRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQ 124

Query: 996  AIKILNDEMQCDIIKIGNMVRNKERFVKRRQLLVGPNSANLKALEILTCCYILVQGNTVS 817
            AIKIL+DEMQCDIIKIGN+VR KERFVKRR+LLVGPNS+ LKALEILT CYILVQGNTV+
Sbjct: 125  AIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVA 184

Query: 816  AMGSFKGLKQVRRVVEDCMLNRLHPVFNIKILLMKRELAKDPTLANENWDRFLPTFXXXX 637
            AMGSFKGLKQVRRVVE+CM+N++HPV+NIKIL+M++ELA DP LANENWDRFLP F    
Sbjct: 185  AMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKT 244

Query: 636  XXXXXXXXXXXXXXXXXXXXXXXXKVDLQLESGEYFLGDXXXXXXXXXXXXXXXXXQIVR 457
                                    ++D+QLE+GEYFL +                 +   
Sbjct: 245  VKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTAD 304

Query: 456  NKRKREEAYIPPEEPGKHNSDASNRDGNDDNVAALALSVKEKAREFGKRKSVEKIDPQDY 277
            NKRKRE A++PP+E  K +   +  DG+ +++A +A S+KEKA+ FGKRK+ E I+P+ Y
Sbjct: 305  NKRKREAAFVPPKEAPKQD---TKPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPEAY 361

Query: 276  IASTGESSRGKK 241
            IAS+ +    KK
Sbjct: 362  IASSSDRPLFKK 373


>gb|AFK40254.1| unknown [Medicago truncatula]
          Length = 380

 Score =  465 bits (1197), Expect = e-128
 Identities = 237/370 (64%), Positives = 279/370 (75%), Gaps = 4/370 (1%)
 Frame = -1

Query: 1329 RHKGKHDKPKPWDDE-SIDHWKIEKFDPSWNESGMLEVSSFSTLFPQYREKYLQECWPDV 1153
            + KGKHDKPKPWDD+ +IDHWK+EKFDPSWNESGMLEVSSFSTLFPQYREKYLQE WP V
Sbjct: 14   KKKGKHDKPKPWDDDPNIDHWKVEKFDPSWNESGMLEVSSFSTLFPQYREKYLQEAWPLV 73

Query: 1152 KRALKEHGIACELNLIEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAAQAIKILNDE 973
            K +LKE GI+ ELNL+EGSMTVSTTRKT+DPYII+KARDLI+LLSRSVPA QAIK+L+DE
Sbjct: 74   KSSLKEFGISAELNLVEGSMTVSTTRKTKDPYIIVKARDLIRLLSRSVPAPQAIKVLDDE 133

Query: 972  MQCDIIKIGNMVRNKERFVKRRQLLVGPNSANLKALEILTCCYILVQGNTVSAMGSFKGL 793
            MQCDIIKI  +VRNKERFVKRRQ LVGPNS+ LKALEILT CYILVQGNTVS MGS+KGL
Sbjct: 134  MQCDIIKISGLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVSVMGSYKGL 193

Query: 792  KQVRRVVEDCMLNRLHPVFNIKILLMKRELAKDPTLANENWDRFLPTFXXXXXXXXXXXX 613
            KQVRR+VE+CMLN++HPV+NIKIL+MK+EL KDP LA ENWDRFLP F            
Sbjct: 194  KQVRRIVEECMLNKMHPVYNIKILMMKKELEKDPALAQENWDRFLPKFNKKNVKQKKVNA 253

Query: 612  XXXXXXXXXXXXXXXXKVDLQLESGEYFLGDXXXXXXXXXXXXXXXXXQIVRNKRKREEA 433
                            KVD+QLE+GEYFL D                 +   NKRKR+E+
Sbjct: 254  KPKKPYTPFPPPQQPSKVDIQLETGEYFLSDKKKSAKKWQERQVQQAEKTAENKRKRDES 313

Query: 432  YIPPEEPGK---HNSDASNRDGNDDNVAALALSVKEKAREFGKRKSVEKIDPQDYIASTG 262
            ++PP+EP     ++ DASN      NVA +A+S+KEKAR+FGKRKS E I+ + YI  + 
Sbjct: 314  FVPPKEPANLVGNSEDASN------NVAEMAMSLKEKARKFGKRKSEENINAETYIMGSS 367

Query: 261  ESSRGKKSRR 232
            +    KKS++
Sbjct: 368  DQPSKKKSKK 377


>gb|ESW13588.1| hypothetical protein PHAVU_008G209100g [Phaseolus vulgaris]
          Length = 389

 Score =  461 bits (1186), Expect = e-127
 Identities = 240/385 (62%), Positives = 285/385 (74%), Gaps = 1/385 (0%)
 Frame = -1

Query: 1383 ETANGEVEWEEQKTKEVTRHKGKHDKPKPWDDE-SIDHWKIEKFDPSWNESGMLEVSSFS 1207
            E  NG VE EE + KE  + KGKHDKPKPWDD+ +IDHWK+EKFDPSWNE GMLEVSSFS
Sbjct: 6    EDENG-VEQEELQKKE--KRKGKHDKPKPWDDDPNIDHWKVEKFDPSWNEGGMLEVSSFS 62

Query: 1206 TLFPQYREKYLQECWPDVKRALKEHGIACELNLIEGSMTVSTTRKTRDPYIIIKARDLIK 1027
            TLFPQY EK+LQE WP VK ALK++GIACELNL+EGSMTVSTTRKTRDPYIIIKARDLIK
Sbjct: 63   TLFPQYLEKHLQEIWPTVKSALKQYGIACELNLVEGSMTVSTTRKTRDPYIIIKARDLIK 122

Query: 1026 LLSRSVPAAQAIKILNDEMQCDIIKIGNMVRNKERFVKRRQLLVGPNSANLKALEILTCC 847
            LL+RSV   QAIKIL+DE+QCDIIKI  +VRNKERFVKRRQ L+GPNS+ LKALEILT C
Sbjct: 123  LLARSVTPTQAIKILDDEVQCDIIKISGLVRNKERFVKRRQHLLGPNSSTLKALEILTGC 182

Query: 846  YILVQGNTVSAMGSFKGLKQVRRVVEDCMLNRLHPVFNIKILLMKRELAKDPTLANENWD 667
            YILVQGNTVSAMGSFKGLKQVRR+VE+CMLN++HPV+NIK+L+MK+EL KDP+LA ENWD
Sbjct: 183  YILVQGNTVSAMGSFKGLKQVRRIVEECMLNKMHPVYNIKVLMMKKELEKDPSLAQENWD 242

Query: 666  RFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDLQLESGEYFLGDXXXXXXXXXXX 487
            RFLP F                            K+D+QLE+GEYFL +           
Sbjct: 243  RFLPKFKKKNVKQKKVNSKQKKPYTPFPPPQQPSKIDIQLETGEYFLNNKRKSAKIWQEK 302

Query: 486  XXXXXXQIVRNKRKREEAYIPPEEPGKHNSDASNRDGNDDNVAALALSVKEKAREFGKRK 307
                  +   NKRKR+EA+IPP+EP   N    + D N + V  + +S+K+K  +FGKRK
Sbjct: 303  QEKQAEKTAENKRKRDEAFIPPKEP--VNPVDKSEDAN-NKVTDITMSLKKKTEKFGKRK 359

Query: 306  SVEKIDPQDYIASTGESSRGKKSRR 232
            S E I+ + YI  + E + GKKS++
Sbjct: 360  SEENINAESYIMGSSEQTSGKKSKK 384


>ref|XP_004491161.1| PREDICTED: KRR1 small subunit processome component homolog [Cicer
            arietinum]
          Length = 382

 Score =  461 bits (1186), Expect = e-127
 Identities = 235/381 (61%), Positives = 280/381 (73%), Gaps = 1/381 (0%)
 Frame = -1

Query: 1368 EVEWEEQKTKEVTRHKGKHDKPKPWDDE-SIDHWKIEKFDPSWNESGMLEVSSFSTLFPQ 1192
            E E   +   +  + KGKHDKPKPWDD+ +IDHWK+EKFDPSWNE GMLEVSSFSTLFPQ
Sbjct: 3    ENELRNEVVVKEKKKKGKHDKPKPWDDDPNIDHWKVEKFDPSWNEGGMLEVSSFSTLFPQ 62

Query: 1191 YREKYLQECWPDVKRALKEHGIACELNLIEGSMTVSTTRKTRDPYIIIKARDLIKLLSRS 1012
            YREKYLQE WP VK +LK+ GI+ ELNL+EGSMTVSTTRKT+DPYII+KARDLI+LLSRS
Sbjct: 63   YREKYLQEAWPLVKSSLKDFGISAELNLVEGSMTVSTTRKTKDPYIIVKARDLIRLLSRS 122

Query: 1011 VPAAQAIKILNDEMQCDIIKIGNMVRNKERFVKRRQLLVGPNSANLKALEILTCCYILVQ 832
            VPA QAIKIL+DEMQCDIIKI  MVRNKERFVKRRQ LVGPNS+ LKALEIL+ CYILVQ
Sbjct: 123  VPAPQAIKILDDEMQCDIIKISGMVRNKERFVKRRQHLVGPNSSTLKALEILSGCYILVQ 182

Query: 831  GNTVSAMGSFKGLKQVRRVVEDCMLNRLHPVFNIKILLMKRELAKDPTLANENWDRFLPT 652
            GNTVS MGSFKGLKQVRR+VE+CMLN++HPV+NIK+L+MK+EL KDP LA ENWDRFLP 
Sbjct: 183  GNTVSVMGSFKGLKQVRRIVEECMLNKMHPVYNIKVLMMKKELEKDPALAEENWDRFLPK 242

Query: 651  FXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDLQLESGEYFLGDXXXXXXXXXXXXXXXX 472
            F                            KVD+QLE+GEYF+ +                
Sbjct: 243  FNKKNVKKKKANSKQKKPYTPFPPPQQPSKVDIQLETGEYFMTEKKKSAKKWQERQEKQA 302

Query: 471  XQIVRNKRKREEAYIPPEEPGKHNSDASNRDGNDDNVAALALSVKEKAREFGKRKSVEKI 292
             +   NKRKREEA+IPP+E   H     N D   +NV+ +A+S+K+KA++FGKRKS E I
Sbjct: 303  EKTAENKRKREEAFIPPKE---HAKPVDNSDDATNNVSEMAMSLKKKAKKFGKRKSEENI 359

Query: 291  DPQDYIASTGESSRGKKSRRN 229
            + + YI  + E    KKS+++
Sbjct: 360  NAETYIMGSSEQPSKKKSKQH 380


>ref|XP_002310107.1| hypothetical protein POPTR_0007s08410g [Populus trichocarpa]
            gi|222853010|gb|EEE90557.1| hypothetical protein
            POPTR_0007s08410g [Populus trichocarpa]
          Length = 379

 Score =  461 bits (1185), Expect = e-127
 Identities = 235/384 (61%), Positives = 282/384 (73%), Gaps = 1/384 (0%)
 Frame = -1

Query: 1377 ANGEVEWEEQKTKEVTRHKGKHDKPKPWD-DESIDHWKIEKFDPSWNESGMLEVSSFSTL 1201
            A+G    +   TK+  +HKGKHDKPKPWD D +ID WKIEKFDPSWN+ GM++VSSFSTL
Sbjct: 3    ADGAENTDISNTKK-PKHKGKHDKPKPWDEDPNIDRWKIEKFDPSWNQGGMVDVSSFSTL 61

Query: 1200 FPQYREKYLQECWPDVKRALKEHGIACELNLIEGSMTVSTTRKTRDPYIIIKARDLIKLL 1021
            FP+YREKYL + WP VK ALKE GI CELN  EGSMTV TT KTRDPYII+KARDLIKLL
Sbjct: 62   FPKYREKYLTDAWPMVKSALKEFGIDCELNKNEGSMTVKTTIKTRDPYIIVKARDLIKLL 121

Query: 1020 SRSVPAAQAIKILNDEMQCDIIKIGNMVRNKERFVKRRQLLVGPNSANLKALEILTCCYI 841
            SRSVPA QAIKILND+M CDIIKIGNM+RNKERFVKRRQ LVGPNS+ LKALE+LT CYI
Sbjct: 122  SRSVPAPQAIKILNDDMSCDIIKIGNMIRNKERFVKRRQNLVGPNSSTLKALELLTGCYI 181

Query: 840  LVQGNTVSAMGSFKGLKQVRRVVEDCMLNRLHPVFNIKILLMKRELAKDPTLANENWDRF 661
            LVQGNTV+AMGSFKGLKQVRR+VEDC+ N++HPV++IKIL+MK+EL KDP L NENWDRF
Sbjct: 182  LVQGNTVAAMGSFKGLKQVRRIVEDCIQNKMHPVYHIKILMMKKELEKDPALKNENWDRF 241

Query: 660  LPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDLQLESGEYFLGDXXXXXXXXXXXXX 481
            LP +                              D+QLE+GEYFL D             
Sbjct: 242  LPKYKKKTVKQKKVKSKKKKQDTPFPPPQQPSMEDIQLETGEYFLSDKKKQAKKWHEKQE 301

Query: 480  XXXXQIVRNKRKREEAYIPPEEPGKHNSDASNRDGNDDNVAALALSVKEKAREFGKRKSV 301
                +   NKRKR+ A++PP+E      D S    N+ +VAA+A+S+K+KA+EFGK+KS 
Sbjct: 302  KQLEKTAENKRKRDAAFVPPKE------DPSTYADNNKDVAAMAMSLKKKAKEFGKQKSF 355

Query: 300  EKIDPQDYIASTGESSRGKKSRRN 229
            E ++P+DYIA++GE  R KKS+R+
Sbjct: 356  ENVNPEDYIATSGEQPRKKKSKRD 379


>ref|XP_004491162.1| PREDICTED: KRR1 small subunit processome component homolog [Cicer
            arietinum]
          Length = 382

 Score =  456 bits (1173), Expect = e-125
 Identities = 233/381 (61%), Positives = 279/381 (73%), Gaps = 1/381 (0%)
 Frame = -1

Query: 1368 EVEWEEQKTKEVTRHKGKHDKPKPWDDE-SIDHWKIEKFDPSWNESGMLEVSSFSTLFPQ 1192
            E E   +   +  + KGKHDKPKPWDD+ +IDHWK+EKFDPSWNE GMLEVSSFSTLFPQ
Sbjct: 3    ENELRNEVVPKEKKKKGKHDKPKPWDDDPNIDHWKVEKFDPSWNEGGMLEVSSFSTLFPQ 62

Query: 1191 YREKYLQECWPDVKRALKEHGIACELNLIEGSMTVSTTRKTRDPYIIIKARDLIKLLSRS 1012
            YREKYLQE WP VK +LK+ GI+ ELNL+EGSMTVSTTRKT+DPYII+KARDLI+LLSRS
Sbjct: 63   YREKYLQEAWPLVKSSLKDFGISAELNLVEGSMTVSTTRKTKDPYIIVKARDLIRLLSRS 122

Query: 1011 VPAAQAIKILNDEMQCDIIKIGNMVRNKERFVKRRQLLVGPNSANLKALEILTCCYILVQ 832
            VPA QAIKIL+DEMQCDIIKI  MVRNKERFVKRRQ LVGPNS+ LKALEIL+ CYILVQ
Sbjct: 123  VPAPQAIKILDDEMQCDIIKISGMVRNKERFVKRRQHLVGPNSSTLKALEILSGCYILVQ 182

Query: 831  GNTVSAMGSFKGLKQVRRVVEDCMLNRLHPVFNIKILLMKRELAKDPTLANENWDRFLPT 652
            GNTVS MGSFKGLKQVRR+VE+CMLN++HPV+NIK+L+MK+EL KDP LA ENWDRFLP 
Sbjct: 183  GNTVSVMGSFKGLKQVRRIVEECMLNKMHPVYNIKVLMMKKELEKDPALAEENWDRFLPK 242

Query: 651  FXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDLQLESGEYFLGDXXXXXXXXXXXXXXXX 472
            F                            KVD+QLE+GEYF+ +                
Sbjct: 243  FNKKNVKKKKANSKQKKPYTPFPPPQQPSKVDIQLETGEYFMTEKKKSAKKWQERQEKQA 302

Query: 471  XQIVRNKRKREEAYIPPEEPGKHNSDASNRDGNDDNVAALALSVKEKAREFGKRKSVEKI 292
             +   NKRKREEA+IPP+E   H     N +  ++NV+ +A S+K+KA++F KRKS E I
Sbjct: 303  EKTAENKRKREEAFIPPKE---HAKPVDNSEDANNNVSEMAKSLKKKAKKFEKRKSEENI 359

Query: 291  DPQDYIASTGESSRGKKSRRN 229
            + + YI  + E    KKS+++
Sbjct: 360  NAETYIMGSSEQPSKKKSKQH 380


>ref|NP_001064737.1| Os10g0452800 [Oryza sativa Japonica Group] gi|31432429|gb|AAP54059.1|
            Ribosomal RNA assembly protein mis3, putative, expressed
            [Oryza sativa Japonica Group]
            gi|113639346|dbj|BAF26651.1| Os10g0452800 [Oryza sativa
            Japonica Group] gi|215687236|dbj|BAG91801.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|222612935|gb|EEE51067.1| hypothetical protein
            OsJ_31745 [Oryza sativa Japonica Group]
          Length = 395

 Score =  455 bits (1170), Expect = e-125
 Identities = 235/386 (60%), Positives = 281/386 (72%), Gaps = 1/386 (0%)
 Frame = -1

Query: 1383 ETANGEVEWEEQKTKEVTRHKGKHDKPKPWDDE-SIDHWKIEKFDPSWNESGMLEVSSFS 1207
            E AN     EE   K+  RHKGKHDKPKPWDD+ +IDHWKIEKFDPSWNE GMLEVSSFS
Sbjct: 7    EEANAASSAEEVGRKKPPRHKGKHDKPKPWDDDPNIDHWKIEKFDPSWNEGGMLEVSSFS 66

Query: 1206 TLFPQYREKYLQECWPDVKRALKEHGIACELNLIEGSMTVSTTRKTRDPYIIIKARDLIK 1027
            TLFPQYREKYLQE WP VK ALKE G+ACELNL+EGSMTVSTTRKTRDPYII+KA++LIK
Sbjct: 67   TLFPQYREKYLQEAWPIVKGALKEFGVACELNLVEGSMTVSTTRKTRDPYIIVKAKELIK 126

Query: 1026 LLSRSVPAAQAIKILNDEMQCDIIKIGNMVRNKERFVKRRQLLVGPNSANLKALEILTCC 847
            LLSRSVPA QAIKILNDEM CDIIKIG+++RNKERFVKRR+ L+GPN + LKA+EILT C
Sbjct: 127  LLSRSVPAPQAIKILNDEMSCDIIKIGSIIRNKERFVKRRERLLGPNLSTLKAIEILTGC 186

Query: 846  YILVQGNTVSAMGSFKGLKQVRRVVEDCMLNRLHPVFNIKILLMKRELAKDPTLANENWD 667
            YILVQGNTV+AMGS+KGLKQVRRVVEDC+ N  HPV++IK LL+KRELAK+P LANE+WD
Sbjct: 187  YILVQGNTVAAMGSWKGLKQVRRVVEDCIKNIKHPVYHIKELLIKRELAKNPALANESWD 246

Query: 666  RFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDLQLESGEYFLGDXXXXXXXXXXX 487
            RFLP F                            K+DL+LESGEYF+ D           
Sbjct: 247  RFLPKFKKKNVKQKKPITKEKKPYTPFPPPQQPSKIDLELESGEYFMSDKKKSAKKWQEK 306

Query: 486  XXXXXXQIVRNKRKREEAYIPPEEPGKHNSDASNRDGNDDNVAALALSVKEKAREFGKRK 307
                  +   NKRKRE A++PP+E      +++    N+D +A +A S+K+KA+EF K +
Sbjct: 307  LEKQSEKAEENKRKREAAFVPPKEDTATPYESAKSTSNNDEIADMAKSLKKKAKEFRKSE 366

Query: 306  SVEKIDPQDYIASTGESSRGKKSRRN 229
            + E +  + Y+AS  E SR KK  ++
Sbjct: 367  AQENVRLESYVAS-NEGSRPKKKHKS 391


>gb|EEC67082.1| hypothetical protein OsI_33853 [Oryza sativa Indica Group]
          Length = 395

 Score =  452 bits (1164), Expect = e-124
 Identities = 234/386 (60%), Positives = 280/386 (72%), Gaps = 1/386 (0%)
 Frame = -1

Query: 1383 ETANGEVEWEEQKTKEVTRHKGKHDKPKPWDDE-SIDHWKIEKFDPSWNESGMLEVSSFS 1207
            E AN     EE   K+  RHKGKHDKPKPWDD+ +IDHWKIEKFDPSWNE GMLEVSSFS
Sbjct: 7    EEANAASSAEEVGRKKPPRHKGKHDKPKPWDDDPNIDHWKIEKFDPSWNEGGMLEVSSFS 66

Query: 1206 TLFPQYREKYLQECWPDVKRALKEHGIACELNLIEGSMTVSTTRKTRDPYIIIKARDLIK 1027
            TLFPQYREKYLQE WP VK ALKE G+ACELNL+EGSMTVSTTRKTRDPYII+KA++LIK
Sbjct: 67   TLFPQYREKYLQEAWPIVKGALKEFGVACELNLVEGSMTVSTTRKTRDPYIIVKAKELIK 126

Query: 1026 LLSRSVPAAQAIKILNDEMQCDIIKIGNMVRNKERFVKRRQLLVGPNSANLKALEILTCC 847
            LLSRSVPA QAIKILNDEM CDIIKIG+++RNKERFVKRR+ L+GPN + LKA+EILT C
Sbjct: 127  LLSRSVPAPQAIKILNDEMSCDIIKIGSIIRNKERFVKRRERLLGPNLSTLKAIEILTGC 186

Query: 846  YILVQGNTVSAMGSFKGLKQVRRVVEDCMLNRLHPVFNIKILLMKRELAKDPTLANENWD 667
            YILVQGNTV+AMGS+KGLKQVRRVVEDC+ N  HPV++IK LL+KRELAK+P LANE+WD
Sbjct: 187  YILVQGNTVAAMGSWKGLKQVRRVVEDCIKNIKHPVYHIKELLIKRELAKNPALANESWD 246

Query: 666  RFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDLQLESGEYFLGDXXXXXXXXXXX 487
            RFLP F                            K+DL+LESGEYF+ D           
Sbjct: 247  RFLPKFKKKNVKQKKPITKEKKPYTPFPPPQQPSKIDLELESGEYFMSDKKKSAKKWQEK 306

Query: 486  XXXXXXQIVRNKRKREEAYIPPEEPGKHNSDASNRDGNDDNVAALALSVKEKAREFGKRK 307
                  +   NKRKRE A++PP+E      +++    N+D +A +A S+K+KA+E  K +
Sbjct: 307  LEKQSEKAEENKRKREAAFVPPKEDTATPYESAKSTSNNDEIADMAKSLKKKAKELRKSE 366

Query: 306  SVEKIDPQDYIASTGESSRGKKSRRN 229
            + E +  + Y+AS  E SR KK  ++
Sbjct: 367  AQENVRLESYVAS-NEGSRPKKKHKS 391


>ref|XP_002871325.1| hypothetical protein ARALYDRAFT_487679 [Arabidopsis lyrata subsp.
            lyrata] gi|297317162|gb|EFH47584.1| hypothetical protein
            ARALYDRAFT_487679 [Arabidopsis lyrata subsp. lyrata]
          Length = 391

 Score =  452 bits (1162), Expect = e-124
 Identities = 228/384 (59%), Positives = 284/384 (73%), Gaps = 4/384 (1%)
 Frame = -1

Query: 1368 EVEWEEQKTKEVTRHKGKHDKPKPWDDE-SIDHWKIEKFDPSWNESGMLEVSSFSTLFPQ 1192
            E+E EEQ  ++  R KGKHDKPKPWDD+ +ID W IEKFDP+WN +GMLE SSFSTLFPQ
Sbjct: 6    ELEHEEQNIEKRVRQKGKHDKPKPWDDDPNIDRWTIEKFDPAWNPTGMLETSSFSTLFPQ 65

Query: 1191 YREKYLQECWPDVKRALKEHGIACELNLIEGSMTVSTTRKTRDPYIIIKARDLIKLLSRS 1012
            YREKYLQE WP V+ ALKE+G+AC+LNL+EGSMTVSTTRKTRDPYII+KARDLIKLLSRS
Sbjct: 66   YREKYLQESWPRVESALKEYGVACKLNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLSRS 125

Query: 1011 VPAAQAIKILNDEMQCDIIKIGNMVRNKERFVKRRQLLVGPNSANLKALEILTCCYILVQ 832
            VPA QAIKIL DEMQCDIIKIG++VRNK+RFVKRRQ LVGPNS+ LKALEILT CYILVQ
Sbjct: 126  VPAPQAIKILEDEMQCDIIKIGSLVRNKQRFVKRRQRLVGPNSSTLKALEILTNCYILVQ 185

Query: 831  GNTVSAMGSFKGLKQVRRVVEDCMLNRLHPVFNIKILLMKRELAKDPTLANENWDRFLPT 652
            G+TV+AMG FKGLKQ+RR+VEDC+ N++HPV++IK L+MK+EL KDP LANE+WDRFLPT
Sbjct: 186  GSTVAAMGPFKGLKQLRRIVEDCVQNKMHPVYHIKTLMMKKELEKDPALANESWDRFLPT 245

Query: 651  FXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDLQLESGEYFLGDXXXXXXXXXXXXXXXX 472
            F                            K+D+QLESGEYF+ D                
Sbjct: 246  FRKKNVKQKKPKSKEKKPYTPFPPPQPPSKIDMQLESGEYFMSDKKKSEKKWLEKQEKQT 305

Query: 471  XQIVRNKRKREEAYIPPEEPGKHNSDASNRDGNDDNVAALALSVKEKAREFGKRKSV-EK 295
             +   NKRKR+ +++PPEEP  +NS A+N +   +++  L  S+K K +E  K+K   E+
Sbjct: 306  EKSTENKRKRDASFLPPEEPMNNNSKANNSEDGKNDITELTQSLKSKTKELKKQKKTHER 365

Query: 294  IDPQDYIA--STGESSRGKKSRRN 229
            ++ ++YIA  S+ +    +KS++N
Sbjct: 366  VNAEEYIAGPSSIDKPAKEKSKKN 389