BLASTX nr result
ID: Catharanthus23_contig00005901
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00005901
(496 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ01001.1| hypothetical protein PRUPE_ppa004717mg [Prunus pe... 90 3e-16
ref|XP_006486680.1| PREDICTED: DDB1- and CUL4-associated factor ... 87 3e-15
ref|XP_006422524.1| hypothetical protein CICLE_v10028158mg [Citr... 87 3e-15
ref|XP_006364511.1| PREDICTED: DDB1- and CUL4-associated factor ... 85 9e-15
ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communi... 82 6e-14
ref|XP_006364512.1| PREDICTED: DDB1- and CUL4-associated factor ... 80 3e-13
ref|XP_002312940.1| transducin family protein [Populus trichocar... 80 3e-13
gb|EOX97564.1| Transducin/WD40 repeat-like superfamily protein i... 74 2e-11
gb|ESW14787.1| hypothetical protein PHAVU_007G017300g [Phaseolus... 73 5e-11
ref|XP_006589730.1| PREDICTED: DDB1- and CUL4-associated factor ... 72 8e-11
ref|XP_003555853.1| PREDICTED: DDB1- and CUL4-associated factor ... 72 8e-11
gb|ACU19502.1| unknown [Glycine max] 72 8e-11
ref|XP_004497203.1| PREDICTED: DDB1- and CUL4-associated factor ... 69 7e-10
ref|XP_006283477.1| hypothetical protein CARUB_v10004525mg [Caps... 66 4e-09
ref|XP_002867089.1| transducin family protein [Arabidopsis lyrat... 65 9e-09
ref|XP_004168977.1| PREDICTED: DDB1- and CUL4-associated factor ... 65 1e-08
ref|XP_004144864.1| PREDICTED: DDB1- and CUL4-associated factor ... 65 1e-08
ref|NP_195240.2| WD repeat-containing protein 42A [Arabidopsis ... 64 2e-08
gb|EOX97563.1| Transducin/WD40 repeat-like superfamily protein i... 63 4e-08
>gb|EMJ01001.1| hypothetical protein PRUPE_ppa004717mg [Prunus persica]
Length = 494
Score = 90.1 bits (222), Expect = 3e-16
Identities = 42/59 (71%), Positives = 50/59 (84%)
Frame = -2
Query: 495 LPTNIEKRRPKTRRWMYRVASPEDLMLQLISLQRQRTSPEPSGENSDVGRDLLQLIMTF 319
LP NIEK++P+ R WMYR++SPEDLMLQL SLQRQR SPE GENS+ G+DLL+LIM F
Sbjct: 414 LPQNIEKKKPRARGWMYRLSSPEDLMLQLFSLQRQRISPERDGENSNDGQDLLELIMAF 472
>ref|XP_006486680.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform X3
[Citrus sinensis]
Length = 492
Score = 86.7 bits (213), Expect = 3e-15
Identities = 41/59 (69%), Positives = 49/59 (83%)
Frame = -2
Query: 495 LPTNIEKRRPKTRRWMYRVASPEDLMLQLISLQRQRTSPEPSGENSDVGRDLLQLIMTF 319
LPTNIE+ +PK RWM+ V SPEDLM+QL SLQR+RTSPE + ENS GR+LLQLI+TF
Sbjct: 422 LPTNIEQFKPKATRWMHHVLSPEDLMMQLFSLQRRRTSPERNDENSAAGRELLQLILTF 480
>ref|XP_006422524.1| hypothetical protein CICLE_v10028158mg [Citrus clementina]
gi|557524458|gb|ESR35764.1| hypothetical protein
CICLE_v10028158mg [Citrus clementina]
Length = 492
Score = 86.7 bits (213), Expect = 3e-15
Identities = 41/59 (69%), Positives = 49/59 (83%)
Frame = -2
Query: 495 LPTNIEKRRPKTRRWMYRVASPEDLMLQLISLQRQRTSPEPSGENSDVGRDLLQLIMTF 319
LPTNIE+ +PK RWM+ V SPEDLM+QL SLQR+RTSPE + ENS GR+LLQLI+TF
Sbjct: 422 LPTNIEQFKPKATRWMHHVLSPEDLMMQLFSLQRRRTSPEHNDENSAAGRELLQLILTF 480
>ref|XP_006364511.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform X2
[Solanum tuberosum]
Length = 494
Score = 85.1 bits (209), Expect = 9e-15
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = -2
Query: 495 LPTNIEKRRPKTRRWMYRVASPEDLMLQLISLQRQRTSPEPSGENSDVGRDLLQLIMTF 319
LPTNI+K+RPK R WM+ +ASPEDLMLQL+S QRQRT+ ENS+VGR+LLQLI+TF
Sbjct: 414 LPTNIQKQRPKARGWMHHMASPEDLMLQLLSQQRQRTNLGSIEENSEVGRELLQLILTF 472
>ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communis]
gi|223539508|gb|EEF41096.1| WD-repeat protein, putative
[Ricinus communis]
Length = 482
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/59 (66%), Positives = 48/59 (81%)
Frame = -2
Query: 495 LPTNIEKRRPKTRRWMYRVASPEDLMLQLISLQRQRTSPEPSGENSDVGRDLLQLIMTF 319
LPTNI + +PK R WMYR+ASP+DLMLQL SLQR RTSPE E+S GR+LL+L++TF
Sbjct: 404 LPTNIGRLKPKARGWMYRIASPQDLMLQLFSLQRWRTSPERIEESSAAGRELLELMLTF 462
>ref|XP_006364512.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform X3
[Solanum tuberosum]
Length = 493
Score = 80.1 bits (196), Expect = 3e-13
Identities = 41/59 (69%), Positives = 49/59 (83%)
Frame = -2
Query: 495 LPTNIEKRRPKTRRWMYRVASPEDLMLQLISLQRQRTSPEPSGENSDVGRDLLQLIMTF 319
LPTNI+KR PK R WM+ +ASPEDLMLQL+S QRQRT+ ENS+VGR+LLQLI+TF
Sbjct: 414 LPTNIQKR-PKARGWMHHMASPEDLMLQLLSQQRQRTNLGSIEENSEVGRELLQLILTF 471
>ref|XP_002312940.1| transducin family protein [Populus trichocarpa]
gi|222849348|gb|EEE86895.1| transducin family protein
[Populus trichocarpa]
Length = 496
Score = 80.1 bits (196), Expect = 3e-13
Identities = 39/59 (66%), Positives = 48/59 (81%)
Frame = -2
Query: 495 LPTNIEKRRPKTRRWMYRVASPEDLMLQLISLQRQRTSPEPSGENSDVGRDLLQLIMTF 319
LPTNI + +PK R WMYR+ASPEDLMLQL SLQRQRTSPE +NS + +LL+LI++F
Sbjct: 416 LPTNIGQVKPKARGWMYRLASPEDLMLQLFSLQRQRTSPESVVQNSVMDSELLELILSF 474
>gb|EOX97564.1| Transducin/WD40 repeat-like superfamily protein isoform 2
[Theobroma cacao]
Length = 491
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/60 (61%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Frame = -2
Query: 495 LPTNIEKRRPKTRRWMYRVASPEDLMLQLISLQRQRTSPEPSGENSD-VGRDLLQLIMTF 319
LPTNIE+ +PK R WMYRV +P+DLML L SLQR +SPE +GENS G +LL L++TF
Sbjct: 411 LPTNIEQFKPKPRGWMYRVTTPQDLMLHLFSLQRWGSSPERNGENSSAAGGELLDLMLTF 470
>gb|ESW14787.1| hypothetical protein PHAVU_007G017300g [Phaseolus vulgaris]
Length = 499
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/59 (61%), Positives = 46/59 (77%)
Frame = -2
Query: 495 LPTNIEKRRPKTRRWMYRVASPEDLMLQLISLQRQRTSPEPSGENSDVGRDLLQLIMTF 319
LP IE++ P+ R WMYR+ASPEDLMLQL+SL R+R E +GENS +DLLQL++TF
Sbjct: 410 LPKIIEQK-PRARGWMYRIASPEDLMLQLLSLPRRRLRTENNGENSTTDQDLLQLLLTF 467
>ref|XP_006589730.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform X3
[Glycine max]
Length = 515
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = -2
Query: 495 LPTNIEKRRPKTRRWMYRVASPEDLMLQLISLQRQRTSPEPSGENSDVGRDLLQLIMTF 319
LP NIE++ PK + WMYR+A PEDLM QLISL R+R E +GENS RDLLQLI+TF
Sbjct: 435 LPKNIEQK-PKAKGWMYRIAYPEDLM-QLISLPRRRVRTESNGENSSTDRDLLQLILTF 491
>ref|XP_003555853.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform 1
[Glycine max]
Length = 489
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = -2
Query: 495 LPTNIEKRRPKTRRWMYRVASPEDLMLQLISLQRQRTSPEPSGENSDVGRDLLQLIMTF 319
LP NIE++ PK + WMYR+A PEDLM QLISL R+R E +GENS RDLLQLI+TF
Sbjct: 409 LPKNIEQK-PKAKGWMYRIAYPEDLM-QLISLPRRRVRTESNGENSSTDRDLLQLILTF 465
>gb|ACU19502.1| unknown [Glycine max]
Length = 489
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = -2
Query: 495 LPTNIEKRRPKTRRWMYRVASPEDLMLQLISLQRQRTSPEPSGENSDVGRDLLQLIMTF 319
LP NIE++ PK + WMYR+A PEDLM QLISL R+R E +GENS RDLLQLI+TF
Sbjct: 409 LPKNIEQK-PKAKGWMYRIAYPEDLM-QLISLPRRRVRTESNGENSSTDRDLLQLILTF 465
>ref|XP_004497203.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform X2
[Cicer arietinum]
Length = 498
Score = 68.9 bits (167), Expect = 7e-10
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = -2
Query: 495 LPTNIEKRRPKTRRWMYRVASPEDLMLQLISLQRQRTSPEPSGENSDVGRDLLQLIMTF 319
LP NIE++ PK R WMY++ASPEDLMLQL SL R+R E S E + R+LL+LI+TF
Sbjct: 415 LPKNIEQK-PKARGWMYQIASPEDLMLQLFSLPRRRVRTENSVERAAADRELLELILTF 472
>ref|XP_006283477.1| hypothetical protein CARUB_v10004525mg [Capsella rubella]
gi|482552182|gb|EOA16375.1| hypothetical protein
CARUB_v10004525mg [Capsella rubella]
Length = 494
Score = 66.2 bits (160), Expect = 4e-09
Identities = 35/61 (57%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Frame = -2
Query: 495 LPTNIEKRRPKTRRWMYRVASPEDLMLQLISLQRQR-TSPEPSGENSD-VGRDLLQLIMT 322
LP NIE R+ K R WMYRV+SP++L+ QL +LQ +R +SPE GE+S GR LL LI+T
Sbjct: 411 LPENIEMRKRKPRGWMYRVSSPQELLAQLFALQNRRSSSPEREGESSSATGRGLLDLILT 470
Query: 321 F 319
F
Sbjct: 471 F 471
>ref|XP_002867089.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
gi|297312925|gb|EFH43348.1| transducin family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 494
Score = 65.1 bits (157), Expect = 9e-09
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Frame = -2
Query: 495 LPTNIEKRRPKTRRWMYRVASPEDLMLQLISLQ-RQRTSPEPSGENSD-VGRDLLQLIMT 322
LP NIE R+ R WMYRV+SP++L+ QL SLQ R +SPE GE+S GR+LL LI+T
Sbjct: 413 LPENIELRKRTPRGWMYRVSSPQELLAQLFSLQNRSSSSPEREGESSSATGRELLDLILT 472
Query: 321 F 319
F
Sbjct: 473 F 473
>ref|XP_004168977.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Cucumis
sativus]
Length = 480
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/59 (55%), Positives = 43/59 (72%)
Frame = -2
Query: 495 LPTNIEKRRPKTRRWMYRVASPEDLMLQLISLQRQRTSPEPSGENSDVGRDLLQLIMTF 319
LP IE++ PK R WM+R+A PE+LM+QL SL+RQ +SPE E V R+LL+LI TF
Sbjct: 404 LPEKIEQK-PKPRGWMHRLALPEELMMQLFSLRRQTSSPESGREPPTVSRELLELIRTF 461
>ref|XP_004144864.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Cucumis
sativus]
Length = 480
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/59 (55%), Positives = 43/59 (72%)
Frame = -2
Query: 495 LPTNIEKRRPKTRRWMYRVASPEDLMLQLISLQRQRTSPEPSGENSDVGRDLLQLIMTF 319
LP IE++ PK R WM+R+A PE+LM+QL SL+RQ +SPE E V R+LL+LI TF
Sbjct: 404 LPEKIEQK-PKPRGWMHRLALPEELMMQLFSLRRQTSSPESGREPPTVSRELLELIRTF 461
>ref|NP_195240.2| WD repeat-containing protein 42A [Arabidopsis thaliana]
gi|21539455|gb|AAM53280.1| putative protein [Arabidopsis
thaliana] gi|23197640|gb|AAN15347.1| putative protein
[Arabidopsis thaliana] gi|332661072|gb|AEE86472.1| WD
repeat-containing protein 42A [Arabidopsis thaliana]
Length = 496
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/61 (57%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Frame = -2
Query: 495 LPTNIEKRRPKTRRWMYRVASPEDLMLQLISLQ-RQRTSPEPSGENSD-VGRDLLQLIMT 322
LP NIE R+ R WMYRV+SP +L+ QL SLQ R +SPE GE+S GR+LL LI+T
Sbjct: 413 LPENIELRKRTPRGWMYRVSSPHELLAQLFSLQNRSSSSPEREGESSSATGRELLDLILT 472
Query: 321 F 319
F
Sbjct: 473 F 473
>gb|EOX97563.1| Transducin/WD40 repeat-like superfamily protein isoform 1
[Theobroma cacao]
Length = 579
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/52 (59%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Frame = -2
Query: 471 RPKTRRWMYRVASPEDLMLQLISLQRQRTSPEPSGENSD-VGRDLLQLIMTF 319
+PK R WMYRV +P+DLML L SLQR +SPE +GENS G +LL L++TF
Sbjct: 507 KPKPRGWMYRVTTPQDLMLHLFSLQRWGSSPERNGENSSAAGGELLDLMLTF 558