BLASTX nr result
ID: Catharanthus23_contig00005791
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00005791
(716 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFK45150.1| unknown [Lotus japonicus] 152 1e-34
ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleo... 152 1e-34
ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleo... 152 1e-34
gb|ACU13643.1| unknown [Glycine max] 152 1e-34
ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago ... 151 2e-34
ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleo... 150 3e-34
ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleo... 150 4e-34
ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleo... 150 4e-34
ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group] g... 150 5e-34
ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group] g... 150 5e-34
gb|EEC72605.1| hypothetical protein OsI_06076 [Oryza sativa Indi... 150 5e-34
ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [A... 149 9e-34
ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleo... 149 9e-34
ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleo... 149 9e-34
gb|ABK22541.1| unknown [Picea sitchensis] 149 9e-34
ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]... 147 3e-33
ref|NP_001151866.1| small nuclear ribonucleoprotein F [Zea mays]... 147 3e-33
gb|ACG39075.1| small nuclear ribonucleoprotein F [Zea mays] 147 3e-33
gb|EMJ25019.1| hypothetical protein PRUPE_ppa014017mg [Prunus pe... 146 6e-33
gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expr... 146 6e-33
>gb|AFK45150.1| unknown [Lotus japonicus]
Length = 88
Score = 152 bits (384), Expect = 1e-34
Identities = 71/76 (93%), Positives = 75/76 (98%)
Frame = -3
Query: 648 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFTGSL 469
MAT+PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYIEGQFTG+L
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60
Query: 468 GEILIRCNNVLYMRGV 421
GEILIRCNNVLY+RGV
Sbjct: 61 GEILIRCNNVLYLRGV 76
>ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
gi|561028116|gb|ESW26756.1| hypothetical protein
PHAVU_003G145500g [Phaseolus vulgaris]
Length = 88
Score = 152 bits (384), Expect = 1e-34
Identities = 71/76 (93%), Positives = 75/76 (98%)
Frame = -3
Query: 648 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFTGSL 469
MAT+PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYIEGQFTG+L
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60
Query: 468 GEILIRCNNVLYMRGV 421
GEILIRCNNVLY+RGV
Sbjct: 61 GEILIRCNNVLYLRGV 76
>ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
gi|255628071|gb|ACU14380.1| unknown [Glycine max]
Length = 88
Score = 152 bits (384), Expect = 1e-34
Identities = 71/76 (93%), Positives = 75/76 (98%)
Frame = -3
Query: 648 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFTGSL 469
MAT+PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYIEGQFTG+L
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60
Query: 468 GEILIRCNNVLYMRGV 421
GEILIRCNNVLY+RGV
Sbjct: 61 GEILIRCNNVLYLRGV 76
>gb|ACU13643.1| unknown [Glycine max]
Length = 88
Score = 152 bits (384), Expect = 1e-34
Identities = 71/76 (93%), Positives = 75/76 (98%)
Frame = -3
Query: 648 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFTGSL 469
MAT+PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYIEGQFTG+L
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60
Query: 468 GEILIRCNNVLYMRGV 421
GEILIRCNNVLY+RGV
Sbjct: 61 GEILIRCNNVLYLRGV 76
>ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago truncatula]
gi|355511167|gb|AES92309.1| Small nuclear
ribonucleoprotein F [Medicago truncatula]
gi|388505566|gb|AFK40849.1| unknown [Medicago
truncatula]
Length = 88
Score = 151 bits (382), Expect = 2e-34
Identities = 71/76 (93%), Positives = 74/76 (97%)
Frame = -3
Query: 648 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFTGSL 469
MAT+PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYIEG FTG+L
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGNFTGNL 60
Query: 468 GEILIRCNNVLYMRGV 421
GEILIRCNNVLYMRGV
Sbjct: 61 GEILIRCNNVLYMRGV 76
>ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleoprotein F [Vitis
vinifera] gi|296083390|emb|CBI23345.3| unnamed protein
product [Vitis vinifera]
Length = 88
Score = 150 bits (380), Expect = 3e-34
Identities = 70/76 (92%), Positives = 76/76 (100%)
Frame = -3
Query: 648 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFTGSL 469
MATVP+NPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN+EEYI+GQFTG+L
Sbjct: 1 MATVPLNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANSEEYIDGQFTGNL 60
Query: 468 GEILIRCNNVLYMRGV 421
GEILIRCNNVLY+RGV
Sbjct: 61 GEILIRCNNVLYLRGV 76
>ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Cicer
arietinum]
Length = 88
Score = 150 bits (379), Expect = 4e-34
Identities = 70/76 (92%), Positives = 74/76 (97%)
Frame = -3
Query: 648 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFTGSL 469
MAT+PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYIEG FTG+L
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGSFTGNL 60
Query: 468 GEILIRCNNVLYMRGV 421
GEILIRCNNVLY+RGV
Sbjct: 61 GEILIRCNNVLYLRGV 76
>ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
[Brachypodium distachyon]
Length = 86
Score = 150 bits (379), Expect = 4e-34
Identities = 70/76 (92%), Positives = 75/76 (98%)
Frame = -3
Query: 648 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFTGSL 469
MATVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYI+GQF+G+L
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 468 GEILIRCNNVLYMRGV 421
GEILIRCNNV+YMRGV
Sbjct: 61 GEILIRCNNVMYMRGV 76
>ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group]
gi|77552372|gb|ABA95169.1| small nuclear
ribonucleoprotein F, putative, expressed [Oryza sativa
Japonica Group] gi|113645618|dbj|BAF28759.1|
Os11g0657300 [Oryza sativa Japonica Group]
gi|215693012|dbj|BAG88432.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218186140|gb|EEC68567.1| hypothetical protein
OsI_36896 [Oryza sativa Indica Group]
gi|222616369|gb|EEE52501.1| hypothetical protein
OsJ_34703 [Oryza sativa Japonica Group]
Length = 86
Score = 150 bits (378), Expect = 5e-34
Identities = 70/76 (92%), Positives = 75/76 (98%)
Frame = -3
Query: 648 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFTGSL 469
MATVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYI+GQF+G+L
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 468 GEILIRCNNVLYMRGV 421
GEILIRCNNVLY+RGV
Sbjct: 61 GEILIRCNNVLYLRGV 76
>ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group]
gi|573918646|ref|XP_006646960.1| PREDICTED: probable
small nuclear ribonucleoprotein F-like [Oryza
brachyantha] gi|50252055|dbj|BAD27986.1| putative small
nuclear ribonucleoprotein polypeptide F [Oryza sativa
Japonica Group] gi|113535599|dbj|BAF07982.1|
Os02g0177500 [Oryza sativa Japonica Group]
Length = 86
Score = 150 bits (378), Expect = 5e-34
Identities = 70/76 (92%), Positives = 75/76 (98%)
Frame = -3
Query: 648 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFTGSL 469
MATVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYI+GQF+G+L
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 468 GEILIRCNNVLYMRGV 421
GEILIRCNNVLY+RGV
Sbjct: 61 GEILIRCNNVLYLRGV 76
>gb|EEC72605.1| hypothetical protein OsI_06076 [Oryza sativa Indica Group]
gi|222622299|gb|EEE56431.1| hypothetical protein
OsJ_05599 [Oryza sativa Japonica Group]
Length = 146
Score = 150 bits (378), Expect = 5e-34
Identities = 70/79 (88%), Positives = 75/79 (94%)
Frame = -3
Query: 657 DNTMATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFT 478
DN TVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYI+GQF+
Sbjct: 58 DNDPVTVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFS 117
Query: 477 GSLGEILIRCNNVLYMRGV 421
G+LGEILIRCNNVLY+RGV
Sbjct: 118 GNLGEILIRCNNVLYLRGV 136
>ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [Amborella trichopoda]
gi|548851446|gb|ERN09722.1| hypothetical protein
AMTR_s00029p00226370 [Amborella trichopoda]
Length = 86
Score = 149 bits (376), Expect = 9e-34
Identities = 70/76 (92%), Positives = 74/76 (97%)
Frame = -3
Query: 648 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFTGSL 469
MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLAN EEYI+GQ +G+L
Sbjct: 1 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQLSGNL 60
Query: 468 GEILIRCNNVLYMRGV 421
GEILIRCNNVLY+RGV
Sbjct: 61 GEILIRCNNVLYLRGV 76
>ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Setaria
italica] gi|514709230|ref|XP_004951733.1| PREDICTED:
probable small nuclear ribonucleoprotein F-like [Setaria
italica]
Length = 86
Score = 149 bits (376), Expect = 9e-34
Identities = 69/76 (90%), Positives = 75/76 (98%)
Frame = -3
Query: 648 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFTGSL 469
MATVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYI+GQF+G+L
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 468 GEILIRCNNVLYMRGV 421
GEILIRCNNV+Y+RGV
Sbjct: 61 GEILIRCNNVMYLRGV 76
>ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
[Brachypodium distachyon]
Length = 86
Score = 149 bits (376), Expect = 9e-34
Identities = 69/76 (90%), Positives = 75/76 (98%)
Frame = -3
Query: 648 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFTGSL 469
MATVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYI+GQF+G+L
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 468 GEILIRCNNVLYMRGV 421
GEILIRCNNV+Y+RGV
Sbjct: 61 GEILIRCNNVMYLRGV 76
>gb|ABK22541.1| unknown [Picea sitchensis]
Length = 84
Score = 149 bits (376), Expect = 9e-34
Identities = 69/76 (90%), Positives = 75/76 (98%)
Frame = -3
Query: 648 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFTGSL 469
MATVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLA+ EEYI+GQFTG+L
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 60
Query: 468 GEILIRCNNVLYMRGV 421
GE+LIRCNNVLY+RGV
Sbjct: 61 GEVLIRCNNVLYLRGV 76
>ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]
gi|194696080|gb|ACF82124.1| unknown [Zea mays]
gi|195609436|gb|ACG26548.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|195622854|gb|ACG33257.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|195639814|gb|ACG39375.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413926377|gb|AFW66309.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413935832|gb|AFW70383.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413935833|gb|AFW70384.1| small nuclear
ribonucleoprotein F [Zea mays]
Length = 86
Score = 147 bits (372), Expect = 3e-33
Identities = 68/76 (89%), Positives = 74/76 (97%)
Frame = -3
Query: 648 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFTGSL 469
MATVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYL SVDSYMNLQLAN EEYI+GQF+G+L
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 468 GEILIRCNNVLYMRGV 421
GEILIRCNNV+Y+RGV
Sbjct: 61 GEILIRCNNVMYLRGV 76
>ref|NP_001151866.1| small nuclear ribonucleoprotein F [Zea mays]
gi|195650409|gb|ACG44672.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413935831|gb|AFW70382.1| small nuclear
ribonucleoprotein F [Zea mays]
Length = 107
Score = 147 bits (371), Expect = 3e-33
Identities = 68/82 (82%), Positives = 76/82 (92%)
Frame = -3
Query: 666 LLSDNTMATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEG 487
L+S + TVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYL SVDSYMNLQLAN EEYI+G
Sbjct: 16 LISSRFVQTVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDG 75
Query: 486 QFTGSLGEILIRCNNVLYMRGV 421
QF+G+LGEILIRCNNV+Y+RGV
Sbjct: 76 QFSGNLGEILIRCNNVMYLRGV 97
>gb|ACG39075.1| small nuclear ribonucleoprotein F [Zea mays]
Length = 86
Score = 147 bits (371), Expect = 3e-33
Identities = 67/76 (88%), Positives = 74/76 (97%)
Frame = -3
Query: 648 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFTGSL 469
MATVPVNPKPFLNNLTGKP++VKLKWGMEYKGYL SVDSYMNLQLAN EEYI+GQF+G+L
Sbjct: 1 MATVPVNPKPFLNNLTGKPIIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 468 GEILIRCNNVLYMRGV 421
GEILIRCNNV+Y+RGV
Sbjct: 61 GEILIRCNNVMYLRGV 76
>gb|EMJ25019.1| hypothetical protein PRUPE_ppa014017mg [Prunus persica]
Length = 91
Score = 146 bits (369), Expect = 6e-33
Identities = 68/76 (89%), Positives = 74/76 (97%)
Frame = -3
Query: 648 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFTGSL 469
MAT+PVNPKPFLNNLTGK V+VKLKWGMEYKG+LVSVDSYMNLQLAN EEYI+GQFTG+L
Sbjct: 1 MATIPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLVSVDSYMNLQLANTEEYIDGQFTGNL 60
Query: 468 GEILIRCNNVLYMRGV 421
GEILIRCNNVLY+RGV
Sbjct: 61 GEILIRCNNVLYLRGV 76
>gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expressed [Oryza
sativa Japonica Group]
Length = 85
Score = 146 bits (369), Expect = 6e-33
Identities = 68/74 (91%), Positives = 73/74 (98%)
Frame = -3
Query: 642 TVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFTGSLGE 463
TVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYI+GQF+G+LGE
Sbjct: 2 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGE 61
Query: 462 ILIRCNNVLYMRGV 421
ILIRCNNVLY+RGV
Sbjct: 62 ILIRCNNVLYLRGV 75