BLASTX nr result
ID: Catharanthus23_contig00005482
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00005482
(1235 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin... 244 4e-62
ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275... 244 5e-62
gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus... 243 1e-61
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote... 242 3e-61
ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus tri... 239 2e-60
ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|5... 238 4e-60
ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like prote... 238 5e-60
gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus pe... 236 2e-59
gb|EOY30223.1| Small nuclear ribonucleoprotein family protein is... 235 3e-59
ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like prote... 235 3e-59
ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like prote... 235 3e-59
ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like prote... 234 4e-59
ref|XP_006426701.1| hypothetical protein CICLE_v10026767mg [Citr... 234 4e-59
ref|XP_006836602.1| hypothetical protein AMTR_s00131p00107350 [A... 233 1e-58
gb|EOY27290.1| Small nuclear ribonucleoprotein family protein is... 233 1e-58
ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like prote... 232 2e-58
ref|XP_004235554.1| PREDICTED: U6 snRNA-associated Sm-like prote... 230 1e-57
ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|2235447... 229 2e-57
ref|XP_006474709.1| PREDICTED: probable U6 snRNA-associated Sm-l... 228 3e-57
ref|XP_006407130.1| hypothetical protein EUTSA_v10021763mg [Eutr... 228 4e-57
>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
gi|255628281|gb|ACU14485.1| unknown [Glycine max]
gi|561008464|gb|ESW07413.1| hypothetical protein
PHAVU_010G127800g [Phaseolus vulgaris]
Length = 128
Score = 244 bits (624), Expect = 4e-62
Identities = 122/128 (95%), Positives = 126/128 (98%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCDIPLGLYVIRGENVVLIGELDL++EELP+HMTRVS AEIKRAQKAEREA+DLKGTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK 120
Query: 495 RMEFLDLD 472
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
putative [Ricinus communis]
Length = 128
Score = 244 bits (623), Expect = 5e-62
Identities = 122/128 (95%), Positives = 126/128 (98%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMG LRSFDQFANAVLEGACERVIVGDL
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCDIPLGLY+IRGENVVLIGELDL+KEELP HMTRVSAAEI+RAQKAER+ATDLKGTMRK
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTMRK 120
Query: 495 RMEFLDLD 472
RMEFLDLD
Sbjct: 121 RMEFLDLD 128
>gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus vulgaris]
Length = 128
Score = 243 bits (620), Expect = 1e-61
Identities = 121/128 (94%), Positives = 126/128 (98%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVG+L
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEL 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCDIPLGLYVIRGENVVLIGELDL++EELP+HMTRVS AEIKRAQKAEREA+DLKGTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK 120
Query: 495 RMEFLDLD 472
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
vinifera] gi|147803430|emb|CAN62239.1| hypothetical
protein VITISV_033727 [Vitis vinifera]
gi|297742980|emb|CBI35847.3| unnamed protein product
[Vitis vinifera]
Length = 128
Score = 242 bits (617), Expect = 3e-61
Identities = 122/128 (95%), Positives = 125/128 (97%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
MSWAGPEDIYLSTSLASYLDKKLLVLLRD RKL+G LRSFDQFANAVLEGACERVIVGDL
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDL 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCDIPLGLYVIRGENVVLIGELDL+KEELP HMTRVSAAEIKRAQKAEREA+DLKGTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTMRK 120
Query: 495 RMEFLDLD 472
RMEFLDLD
Sbjct: 121 RMEFLDLD 128
>ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|222841552|gb|EEE79099.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 239 bits (609), Expect = 2e-60
Identities = 121/128 (94%), Positives = 123/128 (96%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMG LRSFDQFANAVLEGACER IVGDL
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERAIVGDL 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCDI LGLYVIRGENVVLIGELDL++EELP HMTRVS AEIKRAQKAEREATDLKGTMRK
Sbjct: 61 YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIKRAQKAEREATDLKGTMRK 120
Query: 495 RMEFLDLD 472
RMEFLDLD
Sbjct: 121 RMEFLDLD 128
>ref|XP_002331181.1| predicted protein [Populus trichocarpa]
gi|566149434|ref|XP_006369123.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
gi|118489961|gb|ABK96777.1| unknown [Populus trichocarpa
x Populus deltoides] gi|550347483|gb|ERP65692.1| small
nuclear ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 238 bits (607), Expect = 4e-60
Identities = 120/128 (93%), Positives = 124/128 (96%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
MSWAGPEDIYLSTSLA+YLDKKLLVLLRDGRKLMG LRSFDQFANAVLEGACERVIVGDL
Sbjct: 1 MSWAGPEDIYLSTSLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDL 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCDI LGLYVIRGENVVLIGELDL++EELP HMTRVS AEI+RAQKAEREATDLKGTMRK
Sbjct: 61 YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIRRAQKAEREATDLKGTMRK 120
Query: 495 RMEFLDLD 472
RMEFLDLD
Sbjct: 121 RMEFLDLD 128
>ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
lycopersicum]
Length = 128
Score = 238 bits (606), Expect = 5e-60
Identities = 117/128 (91%), Positives = 124/128 (96%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
MSWA PEDIYLSTSLASYLDKKLLVLLRDGRKL+GTLRSFDQFANAVLEGACERVIVG++
Sbjct: 1 MSWASPEDIYLSTSLASYLDKKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGEI 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCDIPLGLY+IRGENVVLIGELD+DKEELP HMTRV AEI+RAQKAEREATDLKGTMRK
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 120
Query: 495 RMEFLDLD 472
RMEFLD+D
Sbjct: 121 RMEFLDMD 128
>gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus persica]
Length = 128
Score = 236 bits (601), Expect = 2e-59
Identities = 117/128 (91%), Positives = 124/128 (96%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
MSWAGPED+YLSTSLASYLDKKLLVLLRDGRKL+G LRSFDQFANAVLEGACERVIVG+L
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCDIPLGLYVIRGENVVLIGELD ++EELP HMTRVSAAEIK AQKAEREA+DLKGTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDSEREELPPHMTRVSAAEIKSAQKAEREASDLKGTMRK 120
Query: 495 RMEFLDLD 472
RMEFLD+D
Sbjct: 121 RMEFLDMD 128
>gb|EOY30223.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
cacao]
Length = 128
Score = 235 bits (599), Expect = 3e-59
Identities = 117/128 (91%), Positives = 123/128 (96%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
MSWAGP+DI+LSTSLA+YLDKKLLVLLRDGRKL+G LRSFDQFAN VLEGACERVIVGDL
Sbjct: 1 MSWAGPDDIFLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCDIPLGLYVIRGENVVLIGELDL+KEELP HMT VSAAEIKRAQKAEREATDLKG+MRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEKEELPSHMTPVSAAEIKRAQKAEREATDLKGSMRK 120
Query: 495 RMEFLDLD 472
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like isoform X1
[Cicer arietinum]
Length = 128
Score = 235 bits (599), Expect = 3e-59
Identities = 115/128 (89%), Positives = 123/128 (96%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
MSWAGPEDIYLSTSLASYLDKKLL+LLRDGRKLMGTLRSFDQFANAVLEGACERV+VGDL
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVVVGDL 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCDIPLGLYVIRGENVVLIGELD+++EELP HMTRV EI RAQKAER+A+DLKGTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDMEREELPPHMTRVPTEEILRAQKAERDASDLKGTMRK 120
Query: 495 RMEFLDLD 472
RMEFLD+D
Sbjct: 121 RMEFLDMD 128
>ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
vesca subsp. vesca]
Length = 128
Score = 235 bits (599), Expect = 3e-59
Identities = 115/128 (89%), Positives = 124/128 (96%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
MSWAGPED+YLSTSLASYLDKK+LVLLRDGRKL+G LRSFDQFANAVLEGACERVIVG+L
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKILVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCD+PLGLYVIRGENVVLIGELD ++EELP HMTRVS AEIKRAQKAEREA+DLKGTMRK
Sbjct: 61 YCDLPLGLYVIRGENVVLIGELDAEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK 120
Query: 495 RMEFLDLD 472
RMEFLD+D
Sbjct: 121 RMEFLDMD 128
>ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
tuberosum]
Length = 128
Score = 234 bits (598), Expect = 4e-59
Identities = 116/128 (90%), Positives = 123/128 (96%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
MSWA EDIYLSTSLASYLDKKLLVLLRDGRKL+GTLRSFDQFANAVLEGACERVIVG++
Sbjct: 1 MSWASSEDIYLSTSLASYLDKKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGEI 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCDIPLGLY+IRGENVVLIGELD+DKEELP HMTRV AEI+RAQKAEREATDLKGTMRK
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 120
Query: 495 RMEFLDLD 472
RMEFLD+D
Sbjct: 121 RMEFLDMD 128
>ref|XP_006426701.1| hypothetical protein CICLE_v10026767mg [Citrus clementina]
gi|568822947|ref|XP_006465886.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm1-like [Citrus
sinensis] gi|557528691|gb|ESR39941.1| hypothetical
protein CICLE_v10026767mg [Citrus clementina]
Length = 128
Score = 234 bits (598), Expect = 4e-59
Identities = 116/128 (90%), Positives = 124/128 (96%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
MSWAGP+D+YLSTSLASYLDKKLLVLLRDGRKLMGTL SFDQFANAVLEGACERVIVGDL
Sbjct: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCDIPLGLYVIRGENVVLIGELDL+++ELP H+T VS AEIKRAQKAEREA+DLKG+MRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRAQKAEREASDLKGSMRK 120
Query: 495 RMEFLDLD 472
RMEFLDLD
Sbjct: 121 RMEFLDLD 128
>ref|XP_006836602.1| hypothetical protein AMTR_s00131p00107350 [Amborella trichopoda]
gi|548839141|gb|ERM99455.1| hypothetical protein
AMTR_s00131p00107350 [Amborella trichopoda]
Length = 128
Score = 233 bits (594), Expect = 1e-58
Identities = 116/128 (90%), Positives = 123/128 (96%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
MSWAGPEDI+LSTSLASYLDKKLLVLLRDGRKL+G LRSFDQFANAVLEGACERVIVGDL
Sbjct: 1 MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCD+PLGLYVIRGENVVLIGELD ++EELP HMTRVSA EIKRAQKAER+A DLKG+MRK
Sbjct: 61 YCDLPLGLYVIRGENVVLIGELDPEREELPAHMTRVSAVEIKRAQKAERDAKDLKGSMRK 120
Query: 495 RMEFLDLD 472
RMEFLDLD
Sbjct: 121 RMEFLDLD 128
>gb|EOY27290.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
cacao]
Length = 128
Score = 233 bits (594), Expect = 1e-58
Identities = 118/128 (92%), Positives = 123/128 (96%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
M + GPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGAC+RVIVGDL
Sbjct: 1 MPYLGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACDRVIVGDL 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCDIPLGLYVIRGENVVLIGELDL++EELP HMT VSAAEI+RAQKAEREA DLKGTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTCVSAAEIRRAQKAEREARDLKGTMRK 120
Query: 495 RMEFLDLD 472
RMEFLDLD
Sbjct: 121 RMEFLDLD 128
>ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Vitis
vinifera] gi|297738539|emb|CBI27784.3| unnamed protein
product [Vitis vinifera]
Length = 128
Score = 232 bits (592), Expect = 2e-58
Identities = 115/128 (89%), Positives = 120/128 (93%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
MSWAGPED+ STSLASYLDKKLLVLLRDGRKL+G LRSFDQFANAVLEGACER IVGD+
Sbjct: 1 MSWAGPEDLLFSTSLASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLEGACERAIVGDI 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCDIPLGLYVIRGENVVL+GELDLDKEELP HMTRV AEIKRAQKAEREATDLKG+MRK
Sbjct: 61 YCDIPLGLYVIRGENVVLLGELDLDKEELPPHMTRVPEAEIKRAQKAEREATDLKGSMRK 120
Query: 495 RMEFLDLD 472
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_004235554.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
lycopersicum] gi|565351988|ref|XP_006342929.1|
PREDICTED: probable U6 snRNA-associated Sm-like protein
LSm1-like [Solanum tuberosum]
Length = 128
Score = 230 bits (586), Expect = 1e-57
Identities = 113/128 (88%), Positives = 121/128 (94%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
MSWA PEDIY STSLASYLDKKLLVLLRDGRKL+G LRSFDQFANAVLE ACER IVGDL
Sbjct: 1 MSWASPEDIYTSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLESACERAIVGDL 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCDIPLGLY+IRGENVVLIGELD+DKEELP HMTRVS AEI+RAQKAER++TDLKG+MRK
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVSEAEIRRAQKAERDSTDLKGSMRK 120
Query: 495 RMEFLDLD 472
RMEFLD+D
Sbjct: 121 RMEFLDMD 128
>ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|223544736|gb|EEF46252.1| lsm1,
putative [Ricinus communis]
Length = 128
Score = 229 bits (583), Expect = 2e-57
Identities = 115/128 (89%), Positives = 121/128 (94%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
MSWAGP+DI+LSTSLA+YLDKKLLVLLRDGRKL+G LRSFDQFAN VLEGACERVIVGDL
Sbjct: 1 MSWAGPDDIFLSTSLATYLDKKLLVLLRDGRKLLGILRSFDQFANVVLEGACERVIVGDL 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCDI LGLYVIRGENVVLIGELDL+KEELP HMT VS AEIKRAQKAEREATDLKG+MRK
Sbjct: 61 YCDILLGLYVIRGENVVLIGELDLEKEELPSHMTCVSEAEIKRAQKAEREATDLKGSMRK 120
Query: 495 RMEFLDLD 472
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_006474709.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
[Citrus sinensis]
Length = 128
Score = 228 bits (582), Expect = 3e-57
Identities = 111/128 (86%), Positives = 122/128 (95%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
MSWAGP+D++LSTSLA+YLDKK+LVLLRDGRKL+G LRSFDQFAN VLEGACER+IVGDL
Sbjct: 1 MSWAGPDDVFLSTSLATYLDKKILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDL 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCDIPLGLYVIRGENVVLIGELDL+KEELP HMTRVS AEIKRAQKAE++AT LKG+MRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEKEELPAHMTRVSTAEIKRAQKAEKDATVLKGSMRK 120
Query: 495 RMEFLDLD 472
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_006407130.1| hypothetical protein EUTSA_v10021763mg [Eutrema salsugineum]
gi|557108276|gb|ESQ48583.1| hypothetical protein
EUTSA_v10021763mg [Eutrema salsugineum]
Length = 128
Score = 228 bits (581), Expect = 4e-57
Identities = 113/128 (88%), Positives = 120/128 (93%)
Frame = -3
Query: 855 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 676
MSWAGPEDIYLSTSLASYLD+KLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVG+
Sbjct: 1 MSWAGPEDIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ 60
Query: 675 YCDIPLGLYVIRGENVVLIGELDLDKEELPQHMTRVSAAEIKRAQKAEREATDLKGTMRK 496
YCDIPLGLYVIRGENVVLIGELD ++EELP HM RVS EIKRAQK EREA++L+GTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDTEREELPPHMIRVSETEIKRAQKVEREASELRGTMRK 120
Query: 495 RMEFLDLD 472
RMEFLD D
Sbjct: 121 RMEFLDFD 128