BLASTX nr result
ID: Catharanthus23_contig00005315
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00005315
(529 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004230263.1| PREDICTED: F-box/LRR-repeat protein 3-like [... 88 1e-15
ref|XP_006344698.1| PREDICTED: F-box/LRR-repeat protein 3-like i... 86 4e-15
ref|XP_002318976.2| F-box family protein [Populus trichocarpa] g... 78 1e-12
ref|XP_002279164.2| PREDICTED: uncharacterized protein LOC100249... 75 7e-12
emb|CBI39535.3| unnamed protein product [Vitis vinifera] 75 7e-12
gb|EOY11550.1| F-box family protein [Theobroma cacao] 75 1e-11
ref|XP_006394932.1| hypothetical protein EUTSA_v10003812mg [Eutr... 74 2e-11
ref|XP_002872252.1| F-box family protein [Arabidopsis lyrata sub... 74 2e-11
ref|XP_002330225.1| predicted protein [Populus trichocarpa] gi|5... 74 2e-11
ref|XP_006472139.1| PREDICTED: F-box/LRR-repeat protein 3-like i... 72 1e-10
ref|XP_006433468.1| hypothetical protein CICLE_v10000558mg [Citr... 72 1e-10
ref|XP_006290009.1| hypothetical protein CARUB_v10003640mg [Caps... 71 1e-10
ref|XP_002512464.1| ubiquitin-protein ligase, putative [Ricinus ... 71 1e-10
ref|NP_568502.1| F-box protein [Arabidopsis thaliana] gi|2644957... 71 2e-10
ref|XP_003626197.1| F-box/LRR-repeat protein [Medicago truncatul... 67 3e-09
ref|XP_003626196.1| F-box/LRR-repeat protein [Medicago truncatul... 67 3e-09
ref|XP_003626195.1| F-box/LRR-repeat protein [Medicago truncatul... 67 3e-09
ref|XP_004494950.1| PREDICTED: F-box/LRR-repeat protein 3-like [... 67 3e-09
ref|XP_002526701.1| F-box protein, atfbl3, putative [Ricinus com... 65 1e-08
gb|EPS67415.1| hypothetical protein M569_07360 [Genlisea aurea] 64 2e-08
>ref|XP_004230263.1| PREDICTED: F-box/LRR-repeat protein 3-like [Solanum lycopersicum]
Length = 643
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/72 (61%), Positives = 53/72 (73%)
Frame = +1
Query: 313 ILSILGEDLLSRIYAFIDDESDRKSFRTTCKVFYRVDSQYRTHLRVRRLEFLPRLLSNFT 492
+LS+L EDLL RI +FI +SDRK+FR CK F RVDS +RTHLR+ R EF+ L S F
Sbjct: 6 LLSVLNEDLLIRILSFITHDSDRKAFRLVCKAFLRVDSFHRTHLRILRPEFITTLFSKFP 65
Query: 493 CITSLDLSVCPR 528
I SLDLSVCP+
Sbjct: 66 RIYSLDLSVCPQ 77
>ref|XP_006344698.1| PREDICTED: F-box/LRR-repeat protein 3-like isoform X1 [Solanum
tuberosum] gi|565355656|ref|XP_006344699.1| PREDICTED:
F-box/LRR-repeat protein 3-like isoform X2 [Solanum
tuberosum]
Length = 641
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/74 (59%), Positives = 52/74 (70%)
Frame = +1
Query: 307 DYILSILGEDLLSRIYAFIDDESDRKSFRTTCKVFYRVDSQYRTHLRVRRLEFLPRLLSN 486
D L +L EDLL RI +FI +SDRK+FR CK F RVDS +RTHLR+ R EF+ L S
Sbjct: 2 DSALFVLNEDLLIRILSFITHDSDRKAFRLVCKAFLRVDSFHRTHLRILRPEFITTLFSK 61
Query: 487 FTCITSLDLSVCPR 528
F I SLDLSVCP+
Sbjct: 62 FPRIYSLDLSVCPQ 75
>ref|XP_002318976.2| F-box family protein [Populus trichocarpa]
gi|550324687|gb|EEE94899.2| F-box family protein
[Populus trichocarpa]
Length = 646
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/71 (56%), Positives = 51/71 (71%)
Frame = +1
Query: 313 ILSILGEDLLSRIYAFIDDESDRKSFRTTCKVFYRVDSQYRTHLRVRRLEFLPRLLSNFT 492
ILS+L EDLL R+ + +SDRK++R CK F+RVDS R LRV +EFLP LL N+T
Sbjct: 8 ILSVLTEDLLIRVNEKLVQDSDRKTWRLICKEFHRVDSITRKTLRVLHVEFLPTLLKNYT 67
Query: 493 CITSLDLSVCP 525
+ +LDLSVCP
Sbjct: 68 NLLTLDLSVCP 78
>ref|XP_002279164.2| PREDICTED: uncharacterized protein LOC100249393 [Vitis vinifera]
Length = 1700
Score = 75.5 bits (184), Expect = 7e-12
Identities = 40/72 (55%), Positives = 49/72 (68%)
Frame = +1
Query: 313 ILSILGEDLLSRIYAFIDDESDRKSFRTTCKVFYRVDSQYRTHLRVRRLEFLPRLLSNFT 492
IL IL +D+L+RI + + E DRK++R C+ F RVDS RT LRV R EFLP LL
Sbjct: 6 ILCILSDDILARIRSKLSSELDRKTWRLVCRDFLRVDSACRTSLRVLRTEFLPGLLQKCR 65
Query: 493 CITSLDLSVCPR 528
+ SLDLSVCPR
Sbjct: 66 NMESLDLSVCPR 77
>emb|CBI39535.3| unnamed protein product [Vitis vinifera]
Length = 643
Score = 75.5 bits (184), Expect = 7e-12
Identities = 40/72 (55%), Positives = 49/72 (68%)
Frame = +1
Query: 313 ILSILGEDLLSRIYAFIDDESDRKSFRTTCKVFYRVDSQYRTHLRVRRLEFLPRLLSNFT 492
IL IL +D+L+RI + + E DRK++R C+ F RVDS RT LRV R EFLP LL
Sbjct: 6 ILCILSDDILARIRSKLSSELDRKTWRLVCRDFLRVDSACRTSLRVLRTEFLPGLLQKCR 65
Query: 493 CITSLDLSVCPR 528
+ SLDLSVCPR
Sbjct: 66 NMESLDLSVCPR 77
>gb|EOY11550.1| F-box family protein [Theobroma cacao]
Length = 654
Score = 74.7 bits (182), Expect = 1e-11
Identities = 38/68 (55%), Positives = 45/68 (66%)
Frame = +1
Query: 325 LGEDLLSRIYAFIDDESDRKSFRTTCKVFYRVDSQYRTHLRVRRLEFLPRLLSNFTCITS 504
L EDLL R+ + ESDRKSFR C+ F+R+D R HLRV R+EFLP LL + S
Sbjct: 13 LTEDLLVRVREKLATESDRKSFRLVCREFHRIDLLTRKHLRVLRIEFLPSLLQKHPQLQS 72
Query: 505 LDLSVCPR 528
LDLS CPR
Sbjct: 73 LDLSACPR 80
>ref|XP_006394932.1| hypothetical protein EUTSA_v10003812mg [Eutrema salsugineum]
gi|557091571|gb|ESQ32218.1| hypothetical protein
EUTSA_v10003812mg [Eutrema salsugineum]
Length = 642
Score = 73.9 bits (180), Expect = 2e-11
Identities = 39/72 (54%), Positives = 51/72 (70%)
Frame = +1
Query: 313 ILSILGEDLLSRIYAFIDDESDRKSFRTTCKVFYRVDSQYRTHLRVRRLEFLPRLLSNFT 492
ILS+L EDLL R+Y F+D RK++R + F RVDS RT +RV R+EFLP LL +
Sbjct: 7 ILSVLSEDLLVRVYGFLDPAC-RKTWRLISREFLRVDSLSRTSIRVLRVEFLPVLLFKYP 65
Query: 493 CITSLDLSVCPR 528
++SLDLSVCP+
Sbjct: 66 YLSSLDLSVCPK 77
>ref|XP_002872252.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
gi|297318089|gb|EFH48511.1| F-box family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 642
Score = 73.9 bits (180), Expect = 2e-11
Identities = 39/72 (54%), Positives = 51/72 (70%)
Frame = +1
Query: 313 ILSILGEDLLSRIYAFIDDESDRKSFRTTCKVFYRVDSQYRTHLRVRRLEFLPRLLSNFT 492
ILS+L EDLL R+Y F+D RK++R K F RVDS RT +R+ R+EFLP LL +
Sbjct: 7 ILSVLSEDLLVRVYEFLDPPC-RKTWRLISKDFLRVDSLSRTTIRILRVEFLPTLLFKYP 65
Query: 493 CITSLDLSVCPR 528
++SLDLSVCP+
Sbjct: 66 NLSSLDLSVCPK 77
>ref|XP_002330225.1| predicted protein [Populus trichocarpa]
gi|566168937|ref|XP_006382444.1| hypothetical protein
POPTR_0005s02230g [Populus trichocarpa]
gi|550337805|gb|ERP60241.1| hypothetical protein
POPTR_0005s02230g [Populus trichocarpa]
Length = 646
Score = 73.9 bits (180), Expect = 2e-11
Identities = 39/72 (54%), Positives = 50/72 (69%)
Frame = +1
Query: 313 ILSILGEDLLSRIYAFIDDESDRKSFRTTCKVFYRVDSQYRTHLRVRRLEFLPRLLSNFT 492
ILS+L EDLL R+ + +SDRK++R CK +RVDS R LRV +EFL LL N+T
Sbjct: 8 ILSVLTEDLLIRVNEKLVQDSDRKTWRLVCKELHRVDSLTRKTLRVLHVEFLLTLLKNYT 67
Query: 493 CITSLDLSVCPR 528
+ +LDLSVCPR
Sbjct: 68 NLHTLDLSVCPR 79
>ref|XP_006472139.1| PREDICTED: F-box/LRR-repeat protein 3-like isoform X2 [Citrus
sinensis]
Length = 611
Score = 71.6 bits (174), Expect = 1e-10
Identities = 40/71 (56%), Positives = 47/71 (66%)
Frame = +1
Query: 316 LSILGEDLLSRIYAFIDDESDRKSFRTTCKVFYRVDSQYRTHLRVRRLEFLPRLLSNFTC 495
L +L EDLL R+ I DE D K++R CK F RVDS RT LRV R+EFL LL +
Sbjct: 7 LDVLTEDLLVRVREKIGDELDSKTWRLVCKEFSRVDSVTRTTLRVLRVEFLFILLDKYPN 66
Query: 496 ITSLDLSVCPR 528
I +LDLSVCPR
Sbjct: 67 IKTLDLSVCPR 77
>ref|XP_006433468.1| hypothetical protein CICLE_v10000558mg [Citrus clementina]
gi|568836208|ref|XP_006472138.1| PREDICTED:
F-box/LRR-repeat protein 3-like isoform X1 [Citrus
sinensis] gi|557535590|gb|ESR46708.1| hypothetical
protein CICLE_v10000558mg [Citrus clementina]
Length = 643
Score = 71.6 bits (174), Expect = 1e-10
Identities = 40/71 (56%), Positives = 47/71 (66%)
Frame = +1
Query: 316 LSILGEDLLSRIYAFIDDESDRKSFRTTCKVFYRVDSQYRTHLRVRRLEFLPRLLSNFTC 495
L +L EDLL R+ I DE D K++R CK F RVDS RT LRV R+EFL LL +
Sbjct: 7 LDVLTEDLLVRVREKIGDELDSKTWRLVCKEFSRVDSVTRTTLRVLRVEFLFILLDKYPN 66
Query: 496 ITSLDLSVCPR 528
I +LDLSVCPR
Sbjct: 67 IKTLDLSVCPR 77
>ref|XP_006290009.1| hypothetical protein CARUB_v10003640mg [Capsella rubella]
gi|482558715|gb|EOA22907.1| hypothetical protein
CARUB_v10003640mg [Capsella rubella]
Length = 642
Score = 71.2 bits (173), Expect = 1e-10
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +1
Query: 313 ILSILGEDLLSRIYAFIDDESDRKSFRTTCKVFYRVDSQYRTHLRVRRLEFLPRLLSNFT 492
ILS+L EDLL R+Y +D RK++R K F RVDS RT +R+ R+EFLP LL +
Sbjct: 7 ILSVLSEDLLVRVYECLDPPC-RKTWRLISKEFLRVDSLTRTTIRILRVEFLPALLLKYP 65
Query: 493 CITSLDLSVCPR 528
++SLDLSVCP+
Sbjct: 66 NLSSLDLSVCPK 77
>ref|XP_002512464.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223548425|gb|EEF49916.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 644
Score = 71.2 bits (173), Expect = 1e-10
Identities = 39/78 (50%), Positives = 50/78 (64%)
Frame = +1
Query: 295 MDCPDYILSILGEDLLSRIYAFIDDESDRKSFRTTCKVFYRVDSQYRTHLRVRRLEFLPR 474
M C I+S L ED+L ++ + ESDRK+FR CK F++++S R LR+ R EFL
Sbjct: 1 MSCQS-IISALTEDILIKVNDKLISESDRKTFRLVCKEFHKIESLTRKTLRILRFEFLLP 59
Query: 475 LLSNFTCITSLDLSVCPR 528
LL F I SLDLSVCPR
Sbjct: 60 LLLKFNNIDSLDLSVCPR 77
>ref|NP_568502.1| F-box protein [Arabidopsis thaliana] gi|26449578|dbj|BAC41915.1|
unknown protein [Arabidopsis thaliana]
gi|29028992|gb|AAO64875.1| At5g27920 [Arabidopsis
thaliana] gi|332006361|gb|AED93744.1| F-box protein
[Arabidopsis thaliana]
Length = 642
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +1
Query: 313 ILSILGEDLLSRIYAFIDDESDRKSFRTTCKVFYRVDSQYRTHLRVRRLEFLPRLLSNFT 492
ILS+L EDLL R+Y +D RK++R K F RVDS RT +R+ R+EFLP LL +
Sbjct: 7 ILSVLSEDLLVRVYECLDPPC-RKTWRLISKDFLRVDSLTRTTIRILRVEFLPTLLFKYP 65
Query: 493 CITSLDLSVCPR 528
++SLDLSVCP+
Sbjct: 66 NLSSLDLSVCPK 77
>ref|XP_003626197.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355501212|gb|AES82415.1| F-box/LRR-repeat protein
[Medicago truncatula]
Length = 605
Score = 67.0 bits (162), Expect = 3e-09
Identities = 42/85 (49%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Frame = +1
Query: 286 LFFMDCPDYILSI-----LGEDLLSRIYAFIDDESDRKSFRTTCKVFYRVDSQYRTHLRV 450
L F+ C + +LS L EDLL R+ +D SDRKSFR CK F RV+S R +R+
Sbjct: 31 LSFLCCFNLMLSESVFCHLTEDLLIRVLDKLD--SDRKSFRLVCKEFLRVESTTRKTIRI 88
Query: 451 RRLEFLPRLLSNFTCITSLDLSVCP 525
R+EFL LL + I SLDLSVCP
Sbjct: 89 LRIEFLLNLLQKYQNIESLDLSVCP 113
>ref|XP_003626196.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355501211|gb|AES82414.1| F-box/LRR-repeat protein
[Medicago truncatula]
Length = 623
Score = 67.0 bits (162), Expect = 3e-09
Identities = 42/85 (49%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Frame = +1
Query: 286 LFFMDCPDYILSI-----LGEDLLSRIYAFIDDESDRKSFRTTCKVFYRVDSQYRTHLRV 450
L F+ C + +LS L EDLL R+ +D SDRKSFR CK F RV+S R +R+
Sbjct: 31 LSFLCCFNLMLSESVFCHLTEDLLIRVLDKLD--SDRKSFRLVCKEFLRVESTTRKTIRI 88
Query: 451 RRLEFLPRLLSNFTCITSLDLSVCP 525
R+EFL LL + I SLDLSVCP
Sbjct: 89 LRIEFLLNLLQKYQNIESLDLSVCP 113
>ref|XP_003626195.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355501210|gb|AES82413.1| F-box/LRR-repeat protein
[Medicago truncatula]
Length = 679
Score = 67.0 bits (162), Expect = 3e-09
Identities = 42/85 (49%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Frame = +1
Query: 286 LFFMDCPDYILSI-----LGEDLLSRIYAFIDDESDRKSFRTTCKVFYRVDSQYRTHLRV 450
L F+ C + +LS L EDLL R+ +D SDRKSFR CK F RV+S R +R+
Sbjct: 31 LSFLCCFNLMLSESVFCHLTEDLLIRVLDKLD--SDRKSFRLVCKEFLRVESTTRKTIRI 88
Query: 451 RRLEFLPRLLSNFTCITSLDLSVCP 525
R+EFL LL + I SLDLSVCP
Sbjct: 89 LRIEFLLNLLQKYQNIESLDLSVCP 113
>ref|XP_004494950.1| PREDICTED: F-box/LRR-repeat protein 3-like [Cicer arietinum]
Length = 669
Score = 66.6 bits (161), Expect = 3e-09
Identities = 38/81 (46%), Positives = 51/81 (62%)
Frame = +1
Query: 286 LFFMDCPDYILSILGEDLLSRIYAFIDDESDRKSFRTTCKVFYRVDSQYRTHLRVRRLEF 465
L F+ + + S+L EDLL RI +D SDRKS+R CK F RV+S R ++R+ R+EF
Sbjct: 25 LHFLMLSESLFSLLTEDLLIRILQKLD--SDRKSWRLVCKDFNRVESLTRKNIRILRVEF 82
Query: 466 LPRLLSNFTCITSLDLSVCPR 528
L LL + I LD S+CPR
Sbjct: 83 LIGLLQKYCNIEMLDFSMCPR 103
>ref|XP_002526701.1| F-box protein, atfbl3, putative [Ricinus communis]
gi|223534001|gb|EEF35723.1| F-box protein, atfbl3,
putative [Ricinus communis]
Length = 669
Score = 65.1 bits (157), Expect = 1e-08
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 313 ILSILGEDLLSRIYAFIDDES-DRKSFRTTCKVFYRVDSQYRTHLRVRRLEFLPRLLSNF 489
+ +L E+++ I F+D DRKSF CK FY ++S++R L+ R E LPR+L+ +
Sbjct: 17 LFDLLSEEIIFSILEFLDTNPLDRKSFSLVCKSFYTIESKHRKILKPLRQEHLPRILNRY 76
Query: 490 TCITSLDLSVCPR 528
+T LDLS+CPR
Sbjct: 77 PHVTHLDLSLCPR 89
>gb|EPS67415.1| hypothetical protein M569_07360 [Genlisea aurea]
Length = 666
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/70 (44%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Frame = +1
Query: 322 ILGEDLLSRIYAFIDDES-DRKSFRTTCKVFYRVDSQYRTHLRVRRLEFLPRLLSNFTCI 498
+L E+++ I F+++ S D+KSF CK FY ++S++R L+ R E LPR+L+ + I
Sbjct: 14 LLSEEIVFIILDFLNENSLDKKSFSLVCKSFYEIESRHRKLLKPLRSEHLPRVLARYPYI 73
Query: 499 TSLDLSVCPR 528
T+LDLS+CPR
Sbjct: 74 TTLDLSLCPR 83