BLASTX nr result
ID: Catharanthus23_contig00005158
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus23_contig00005158 (267 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EOY11251.1| NB-ARC domain-containing disease resistance prote... 42 8e-06 gb|EOY11578.1| NB-ARC domain-containing disease resistance prote... 39 1e-05 ref|XP_006382685.1| putative disease resistance gene NBS-LRR fam... 41 1e-05 ref|XP_002336027.1| cc-nbs-lrr resistance protein [Populus trich... 41 1e-05 >gb|EOY11251.1| NB-ARC domain-containing disease resistance protein, putative [Theobroma cacao] Length = 851 Score = 42.0 bits (97), Expect(2) = 8e-06 Identities = 22/44 (50%), Positives = 30/44 (68%) Frame = -3 Query: 262 LSSLCTLCLEYCTLRTNLSIIGSCKQLEVLSFFLSDLDELPXXV 131 L+SL TLCL+ C LR +++IIG K LE+LS SD+ LP + Sbjct: 477 LTSLHTLCLDQCELR-DITIIGKLKNLEILSLLKSDIRILPKEI 519 Score = 33.1 bits (74), Expect(2) = 8e-06 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = -1 Query: 135 KLLDLRCSEGPRTILSGVFSELTNLEELYIGG-FRNWEEAGY 13 KLLDL + I V S L+ LEELY+GG F W+ G+ Sbjct: 526 KLLDLSHCTKLKIIPPSVLSNLSKLEELYMGGTFIQWQVGGH 567 >gb|EOY11578.1| NB-ARC domain-containing disease resistance protein, putative [Theobroma cacao] Length = 1578 Score = 38.9 bits (89), Expect(2) = 1e-05 Identities = 22/46 (47%), Positives = 29/46 (63%) Frame = -3 Query: 262 LSSLCTLCLEYCTLRTNLSIIGSCKQLEVLSFFLSDLDELPXXVVR 125 L+SL TLCL+YC L +++IIG K LE+LS S LP + R Sbjct: 578 LTSLRTLCLDYCKL-GDIAIIGELKNLEILSLLGSHFRILPKEIGR 622 Score = 35.8 bits (81), Expect(2) = 1e-05 Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = -1 Query: 135 KLLDLRCSEGPRTILSGVFSELTNLEELY-IGGFRNWE 25 KLLDLR + I +G FS L+ LEELY +G F WE Sbjct: 627 KLLDLRYCAALKIIPTGFFSTLSRLEELYMLGTFIQWE 664 >ref|XP_006382685.1| putative disease resistance gene NBS-LRR family protein [Populus trichocarpa] gi|550338050|gb|ERP60482.1| putative disease resistance gene NBS-LRR family protein [Populus trichocarpa] Length = 1337 Score = 41.2 bits (95), Expect(2) = 1e-05 Identities = 21/45 (46%), Positives = 31/45 (68%) Frame = -3 Query: 265 FLSSLCTLCLEYCTLRTNLSIIGSCKQLEVLSFFLSDLDELPXXV 131 FL +L TLCL++C L ++SI+G K+L+VLS SD+ LP + Sbjct: 563 FLENLQTLCLDFCVLE-DISIVGELKKLKVLSLMGSDIVCLPREI 606 Score = 33.5 bits (75), Expect(2) = 1e-05 Identities = 20/40 (50%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = -1 Query: 132 LLDLRCSEGPRTILSGVFSELTNLEELYIG-GFRNWEEAG 16 LLDL E I V S LT LEELY+G F WE G Sbjct: 614 LLDLSNCERLEVISPNVLSSLTRLEELYMGNSFLKWEAEG 653 >ref|XP_002336027.1| cc-nbs-lrr resistance protein [Populus trichocarpa] Length = 1337 Score = 41.2 bits (95), Expect(2) = 1e-05 Identities = 21/45 (46%), Positives = 31/45 (68%) Frame = -3 Query: 265 FLSSLCTLCLEYCTLRTNLSIIGSCKQLEVLSFFLSDLDELPXXV 131 FL +L TLCL++C L ++SI+G K+L+VLS SD+ LP + Sbjct: 563 FLENLQTLCLDFCVLE-DISIVGELKKLKVLSLMGSDIVCLPREI 606 Score = 33.5 bits (75), Expect(2) = 1e-05 Identities = 20/40 (50%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = -1 Query: 132 LLDLRCSEGPRTILSGVFSELTNLEELYIG-GFRNWEEAG 16 LLDL E I V S LT LEELY+G F WE G Sbjct: 614 LLDLSNCERLEVISPNVLSSLTRLEELYMGNSFLKWEAEG 653