BLASTX nr result

ID: Catharanthus23_contig00005158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00005158
         (267 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY11251.1| NB-ARC domain-containing disease resistance prote...    42   8e-06
gb|EOY11578.1| NB-ARC domain-containing disease resistance prote...    39   1e-05
ref|XP_006382685.1| putative disease resistance gene NBS-LRR fam...    41   1e-05
ref|XP_002336027.1| cc-nbs-lrr resistance protein [Populus trich...    41   1e-05

>gb|EOY11251.1| NB-ARC domain-containing disease resistance protein, putative
           [Theobroma cacao]
          Length = 851

 Score = 42.0 bits (97), Expect(2) = 8e-06
 Identities = 22/44 (50%), Positives = 30/44 (68%)
 Frame = -3

Query: 262 LSSLCTLCLEYCTLRTNLSIIGSCKQLEVLSFFLSDLDELPXXV 131
           L+SL TLCL+ C LR +++IIG  K LE+LS   SD+  LP  +
Sbjct: 477 LTSLHTLCLDQCELR-DITIIGKLKNLEILSLLKSDIRILPKEI 519



 Score = 33.1 bits (74), Expect(2) = 8e-06
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -1

Query: 135 KLLDLRCSEGPRTILSGVFSELTNLEELYIGG-FRNWEEAGY 13
           KLLDL      + I   V S L+ LEELY+GG F  W+  G+
Sbjct: 526 KLLDLSHCTKLKIIPPSVLSNLSKLEELYMGGTFIQWQVGGH 567


>gb|EOY11578.1| NB-ARC domain-containing disease resistance protein, putative
           [Theobroma cacao]
          Length = 1578

 Score = 38.9 bits (89), Expect(2) = 1e-05
 Identities = 22/46 (47%), Positives = 29/46 (63%)
 Frame = -3

Query: 262 LSSLCTLCLEYCTLRTNLSIIGSCKQLEVLSFFLSDLDELPXXVVR 125
           L+SL TLCL+YC L  +++IIG  K LE+LS   S    LP  + R
Sbjct: 578 LTSLRTLCLDYCKL-GDIAIIGELKNLEILSLLGSHFRILPKEIGR 622



 Score = 35.8 bits (81), Expect(2) = 1e-05
 Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -1

Query: 135 KLLDLRCSEGPRTILSGVFSELTNLEELY-IGGFRNWE 25
           KLLDLR     + I +G FS L+ LEELY +G F  WE
Sbjct: 627 KLLDLRYCAALKIIPTGFFSTLSRLEELYMLGTFIQWE 664


>ref|XP_006382685.1| putative disease resistance gene NBS-LRR family protein [Populus
           trichocarpa] gi|550338050|gb|ERP60482.1| putative
           disease resistance gene NBS-LRR family protein [Populus
           trichocarpa]
          Length = 1337

 Score = 41.2 bits (95), Expect(2) = 1e-05
 Identities = 21/45 (46%), Positives = 31/45 (68%)
 Frame = -3

Query: 265 FLSSLCTLCLEYCTLRTNLSIIGSCKQLEVLSFFLSDLDELPXXV 131
           FL +L TLCL++C L  ++SI+G  K+L+VLS   SD+  LP  +
Sbjct: 563 FLENLQTLCLDFCVLE-DISIVGELKKLKVLSLMGSDIVCLPREI 606



 Score = 33.5 bits (75), Expect(2) = 1e-05
 Identities = 20/40 (50%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -1

Query: 132 LLDLRCSEGPRTILSGVFSELTNLEELYIG-GFRNWEEAG 16
           LLDL   E    I   V S LT LEELY+G  F  WE  G
Sbjct: 614 LLDLSNCERLEVISPNVLSSLTRLEELYMGNSFLKWEAEG 653


>ref|XP_002336027.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1337

 Score = 41.2 bits (95), Expect(2) = 1e-05
 Identities = 21/45 (46%), Positives = 31/45 (68%)
 Frame = -3

Query: 265 FLSSLCTLCLEYCTLRTNLSIIGSCKQLEVLSFFLSDLDELPXXV 131
           FL +L TLCL++C L  ++SI+G  K+L+VLS   SD+  LP  +
Sbjct: 563 FLENLQTLCLDFCVLE-DISIVGELKKLKVLSLMGSDIVCLPREI 606



 Score = 33.5 bits (75), Expect(2) = 1e-05
 Identities = 20/40 (50%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -1

Query: 132 LLDLRCSEGPRTILSGVFSELTNLEELYIG-GFRNWEEAG 16
           LLDL   E    I   V S LT LEELY+G  F  WE  G
Sbjct: 614 LLDLSNCERLEVISPNVLSSLTRLEELYMGNSFLKWEAEG 653


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