BLASTX nr result

ID: Catharanthus23_contig00005141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00005141
         (714 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71712.1| hypothetical protein VITISV_013459 [Vitis vinifera]    66   1e-08
ref|XP_002325644.2| hypothetical protein POPTR_0019s14980g [Popu...    58   3e-06
ref|XP_006388517.1| hypothetical protein POPTR_0167s00240g [Popu...    58   3e-06
ref|XP_006388515.1| hypothetical protein POPTR_0167s00210g [Popu...    57   5e-06

>emb|CAN71712.1| hypothetical protein VITISV_013459 [Vitis vinifera]
          Length = 115

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
 Frame = +2

Query: 296 EKLDQRINVIGLPFMIITGLVLFLLCSCCCGG-RKKQPVKMMKAPGRNSRMPRKSFEDNP 472
           EKL   I V G PF+I+ GLVL +   CCCG  R ++ VKMMKAPGR+ RM R  FE NP
Sbjct: 43  EKLRHWIQV-GAPFLIL-GLVLVVFYYCCCGCCRGRRGVKMMKAPGRDYRMARPPFESNP 100

Query: 473 RNYFQNL 493
           R YF+ L
Sbjct: 101 RGYFRGL 107


>ref|XP_002325644.2| hypothetical protein POPTR_0019s14980g [Populus trichocarpa]
           gi|550317594|gb|EEF00026.2| hypothetical protein
           POPTR_0019s14980g [Populus trichocarpa]
          Length = 156

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
 Frame = +2

Query: 329 LPFMI-ITGLVLFLLCSCCCGGRKKQPVKMMKAPGRNSRMPRKSFEDNPRNYFQNLHPK 502
           +P M+ +  +V+ LL   CCGG  K  VK MKAPGRNSR+PR++FE +P  YF+ L  +
Sbjct: 99  VPIMVAVVVVVILLLFRGCCGGSAKS-VKTMKAPGRNSRIPRRNFEASPSAYFRGLRKR 156


>ref|XP_006388517.1| hypothetical protein POPTR_0167s00240g [Populus trichocarpa]
           gi|550310307|gb|ERP47431.1| hypothetical protein
           POPTR_0167s00240g [Populus trichocarpa]
          Length = 173

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 30/55 (54%), Positives = 37/55 (67%)
 Frame = +2

Query: 329 LPFMIITGLVLFLLCSCCCGGRKKQPVKMMKAPGRNSRMPRKSFEDNPRNYFQNL 493
           +P M+   +V+ LL   CCGG  K  VK MKAPGRN RMPR +FE NP  YF++L
Sbjct: 118 VPIMVAV-VVIVLLFGGCCGGAAKS-VKTMKAPGRNYRMPRSNFEANPSAYFRDL 170


>ref|XP_006388515.1| hypothetical protein POPTR_0167s00210g [Populus trichocarpa]
           gi|550310305|gb|ERP47429.1| hypothetical protein
           POPTR_0167s00210g [Populus trichocarpa]
          Length = 66

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 30/55 (54%), Positives = 36/55 (65%)
 Frame = +2

Query: 329 LPFMIITGLVLFLLCSCCCGGRKKQPVKMMKAPGRNSRMPRKSFEDNPRNYFQNL 493
           +P M+   +V+ LL   CCGG  K  VK MKAPGRN RMPR +FE NP  YF+ L
Sbjct: 11  VPIMVAV-VVIVLLFRGCCGGASKS-VKTMKAPGRNYRMPRSNFEANPSAYFRGL 63


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