BLASTX nr result
ID: Catharanthus23_contig00005026
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00005026
(671 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004247717.1| PREDICTED: transcription factor bHLH104-like... 98 3e-18
ref|XP_006354504.1| PREDICTED: transcription factor bHLH104-like... 92 1e-16
gb|EOY06012.1| Basic helix-loop-helix DNA-binding superfamily pr... 73 7e-11
dbj|BAJ40866.1| bHLH transcriptional factor [Coptis japonica] 72 2e-10
ref|XP_006298151.1| hypothetical protein CARUB_v10014200mg [Caps... 70 6e-10
gb|ACN40301.1| unknown [Picea sitchensis] 70 6e-10
ref|XP_002280987.2| PREDICTED: transcription factor bHLH104-like... 70 8e-10
ref|XP_006406065.1| hypothetical protein EUTSA_v10021177mg [Eutr... 69 1e-09
gb|EXB54027.1| hypothetical protein L484_012819 [Morus notabilis] 67 4e-09
ref|XP_006379889.1| hypothetical protein POPTR_0008s16560g [Popu... 67 4e-09
ref|XP_002529295.1| DNA binding protein, putative [Ricinus commu... 67 4e-09
ref|NP_188962.2| transcription factor bHLH34 [Arabidopsis thalia... 66 8e-09
gb|AAM10939.1|AF488573_1 putative bHLH transcription factor [Ara... 66 8e-09
ref|XP_004497838.1| PREDICTED: transcription factor bHLH104-like... 65 2e-08
ref|XP_003590056.1| Transcription factor bHLH104 [Medicago trunc... 64 3e-08
ref|XP_002314636.1| basic helix-loop-helix family protein [Popul... 64 3e-08
ref|XP_006370611.1| basic helix-loop-helix family protein [Popul... 64 5e-08
ref|XP_002319273.1| predicted protein [Populus trichocarpa] 64 5e-08
gb|ABK96448.1| unknown [Populus trichocarpa x Populus deltoides] 64 5e-08
ref|XP_006352486.1| PREDICTED: transcription factor ILR3-like [S... 63 7e-08
>ref|XP_004247717.1| PREDICTED: transcription factor bHLH104-like [Solanum lycopersicum]
Length = 226
Score = 97.8 bits (242), Expect = 3e-18
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 3/105 (2%)
Frame = +3
Query: 363 DNMNGSTWEDGIDLIDINSFINDVALQNSNDPYSYWSN---QDYSTGVEIDASLSGAASL 533
D+ + W DLID NSFI++ P ++ N QD S E++A LS AA
Sbjct: 5 DSFRDANW----DLIDFNSFIDE------ESPIDFFWNDQTQDLSAVAEVEAPLSSAAL- 53
Query: 534 EKECAEVECPRKRGRAESCSRVGTKACREKLRREKLNDKFSELCS 668
+EC E ECPRKRGR ESCS+ G KACRE+LRREKLN++FS+LCS
Sbjct: 54 -QECIETECPRKRGRNESCSKQGNKACRERLRREKLNERFSDLCS 97
>ref|XP_006354504.1| PREDICTED: transcription factor bHLH104-like [Solanum tuberosum]
Length = 226
Score = 92.4 bits (228), Expect = 1e-16
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Frame = +3
Query: 399 DLIDINSFINDVALQNSNDPYSYWSN---QDYSTGVEIDASLSGAASLEKECAEVECPRK 569
DLIDINSFI++ A P ++ N Q+ T E++A LS AA +EC E E PRK
Sbjct: 13 DLIDINSFIDEEA------PIDFFWNDQTQNLRTVAELEAPLSSAAF--QECIETEYPRK 64
Query: 570 RGRAESCSRVGTKACREKLRREKLNDKFSELCS 668
RGR ESCS+ G KACRE+LRREKLN++FS+LCS
Sbjct: 65 RGRNESCSKQGNKACRERLRREKLNERFSDLCS 97
>gb|EOY06012.1| Basic helix-loop-helix DNA-binding superfamily protein isoform 1
[Theobroma cacao]
Length = 219
Score = 73.2 bits (178), Expect = 7e-11
Identities = 35/63 (55%), Positives = 45/63 (71%)
Frame = +3
Query: 480 DYSTGVEIDASLSGAASLEKECAEVECPRKRGRAESCSRVGTKACREKLRREKLNDKFSE 659
+YS G EI+ S EKE + +C RKRGR+ SCSR GTKACRE+LRRE+LN++F +
Sbjct: 27 NYSDGREIELSSGNVVHQEKEFEDRDCSRKRGRSGSCSRPGTKACRERLRRERLNERFLD 86
Query: 660 LCS 668
L S
Sbjct: 87 LSS 89
>dbj|BAJ40866.1| bHLH transcriptional factor [Coptis japonica]
Length = 219
Score = 71.6 bits (174), Expect = 2e-10
Identities = 45/100 (45%), Positives = 60/100 (60%)
Frame = +3
Query: 369 MNGSTWEDGIDLIDINSFINDVALQNSNDPYSYWSNQDYSTGVEIDASLSGAASLEKECA 548
MN + +LID D +SND + SNQ T E+D S +GA +EK CA
Sbjct: 1 MNSFPEDSPWNLIDYTRLYED---PSSND-LLWCSNQSACT--ELDVSAAGAGPVEKGCA 54
Query: 549 EVECPRKRGRAESCSRVGTKACREKLRREKLNDKFSELCS 668
+KRGR ESC +G+KACREK+RR+KLND+F++L S
Sbjct: 55 -----KKRGRNESCGGLGSKACREKMRRDKLNDRFADLSS 89
>ref|XP_006298151.1| hypothetical protein CARUB_v10014200mg [Capsella rubella]
gi|482566860|gb|EOA31049.1| hypothetical protein
CARUB_v10014200mg [Capsella rubella]
Length = 321
Score = 70.1 bits (170), Expect = 6e-10
Identities = 38/59 (64%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = +3
Query: 495 VEIDASLS-GAASLEKECAEVECPRKRGRAESCSRVGTKACREKLRREKLNDKFSELCS 668
VEI++S S GA E E E EC RKR R SCS+ GTKACREKLRREKLND+F +L S
Sbjct: 131 VEINSSSSVGAVKEELEHVEEECSRKRRRTGSCSKPGTKACREKLRREKLNDRFMDLSS 189
>gb|ACN40301.1| unknown [Picea sitchensis]
Length = 232
Score = 70.1 bits (170), Expect = 6e-10
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = +3
Query: 417 SFINDVALQNSNDPYS--YWSNQDYSTGVEIDASLSGAASLEKECAEVECPRKRGRAESC 590
SF+ D L++ + P + +W Q + + A S + + +KE E CPRKR R ESC
Sbjct: 12 SFLEDNLLEDVSQPANSFFWPAQPVNVQPDCSAIPSDSKN-DKEDGEKMCPRKRPRDESC 70
Query: 591 SRVGTKACREKLRREKLNDKFSEL 662
S+ G KACREK+RRE+LND+F+EL
Sbjct: 71 SKHGIKACREKMRRERLNDRFTEL 94
>ref|XP_002280987.2| PREDICTED: transcription factor bHLH104-like [Vitis vinifera]
Length = 219
Score = 69.7 bits (169), Expect = 8e-10
Identities = 42/102 (41%), Positives = 55/102 (53%)
Frame = +3
Query: 363 DNMNGSTWEDGIDLIDINSFINDVALQNSNDPYSYWSNQDYSTGVEIDASLSGAASLEKE 542
D+ + TW+ F+N + + W N Y GV+ID S AAS E E
Sbjct: 2 DSFDDDTWD----------FLNHKLIDDVTSNDLSWINDGYLAGVDIDLSRICAASQENE 51
Query: 543 CAEVECPRKRGRAESCSRVGTKACREKLRREKLNDKFSELCS 668
+ KRGR +S +R GTKACREKLRRE+LND+F +L S
Sbjct: 52 GRQ-----KRGRNDSSTRPGTKACREKLRRERLNDRFLDLSS 88
>ref|XP_006406065.1| hypothetical protein EUTSA_v10021177mg [Eutrema salsugineum]
gi|557107211|gb|ESQ47518.1| hypothetical protein
EUTSA_v10021177mg [Eutrema salsugineum]
Length = 312
Score = 68.9 bits (167), Expect = 1e-09
Identities = 35/59 (59%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = +3
Query: 495 VEIDASLS-GAASLEKECAEVECPRKRGRAESCSRVGTKACREKLRREKLNDKFSELCS 668
VEI++S S GA E+E + EC RKRGR SCS++G+KACREK RRE+LN+KF++L S
Sbjct: 126 VEINSSSSIGAIKEEQEHVQEECSRKRGRTGSCSKLGSKACREKRRREQLNEKFTDLSS 184
>gb|EXB54027.1| hypothetical protein L484_012819 [Morus notabilis]
Length = 237
Score = 67.4 bits (163), Expect = 4e-09
Identities = 49/129 (37%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Frame = +3
Query: 297 SGFWDFL*FDMDRGFIGDSSLTDNMNGSTWEDGIDLIDINSFINDVALQNSNDPYSYWSN 476
SGFWDFL D FI D D + W N+ + DV + N
Sbjct: 7 SGFWDFL----DYSFIADDQPADFL----WS--------NNSVMDVDFSGGG---AVGGN 47
Query: 477 QDYSTGVEIDASLSGAASLEKECAEVECPRKRGRAESCSRVGTKACREKLRREKLNDK-- 650
+++ G D GA+ +++E ECPRKR R ESCS+ G+KA R KLRRE+LND+
Sbjct: 48 DEHANG---DGDGDGASEVKEE---KECPRKRERTESCSKQGSKAYRGKLRRERLNDRHA 101
Query: 651 ---FSELCS 668
F +LCS
Sbjct: 102 THLFMDLCS 110
>ref|XP_006379889.1| hypothetical protein POPTR_0008s16560g [Populus trichocarpa]
gi|550333228|gb|ERP57686.1| hypothetical protein
POPTR_0008s16560g [Populus trichocarpa]
Length = 218
Score = 67.4 bits (163), Expect = 4e-09
Identities = 35/71 (49%), Positives = 47/71 (66%)
Frame = +3
Query: 456 PYSYWSNQDYSTGVEIDASLSGAASLEKECAEVECPRKRGRAESCSRVGTKACREKLRRE 635
P + +N Y V+ D S + E+EC+ RKRGR++SCSR GTKACREKLRR+
Sbjct: 23 PDNSLTNSGYGGVVDNDFLSSVLVTQERECS-----RKRGRSDSCSRAGTKACREKLRRD 77
Query: 636 KLNDKFSELCS 668
+LND+F +L S
Sbjct: 78 RLNDRFQDLSS 88
>ref|XP_002529295.1| DNA binding protein, putative [Ricinus communis]
gi|223531219|gb|EEF33064.1| DNA binding protein,
putative [Ricinus communis]
Length = 219
Score = 67.4 bits (163), Expect = 4e-09
Identities = 44/98 (44%), Positives = 55/98 (56%)
Frame = +3
Query: 375 GSTWEDGIDLIDINSFINDVALQNSNDPYSYWSNQDYSTGVEIDASLSGAASLEKECAEV 554
GS W D +D SFI + + W N + + EID S SG A E E
Sbjct: 7 GSCW----DFLDY-SFIEETTTSSD----LLWPNSNNNLS-EIDFSSSGGAVSE----EK 52
Query: 555 ECPRKRGRAESCSRVGTKACREKLRREKLNDKFSELCS 668
+C RKR R +SCS+ TKACREKLRRE+LND+F +L S
Sbjct: 53 QCSRKRARGDSCSKPVTKACREKLRRERLNDRFQDLSS 90
>ref|NP_188962.2| transcription factor bHLH34 [Arabidopsis thaliana]
gi|75311556|sp|Q9LTC7.1|BH034_ARATH RecName:
Full=Transcription factor bHLH34; AltName: Full=Basic
helix-loop-helix protein 34; Short=AtbHLH34; Short=bHLH
34; AltName: Full=Transcription factor EN 135; AltName:
Full=bHLH transcription factor bHLH034
gi|7939531|dbj|BAA95734.1| unnamed protein product
[Arabidopsis thaliana] gi|20466416|gb|AAM20525.1|
unknown protein [Arabidopsis thaliana]
gi|22136350|gb|AAM91253.1| unknown protein [Arabidopsis
thaliana] gi|332643214|gb|AEE76735.1| transcription
factor bHLH34 [Arabidopsis thaliana]
Length = 320
Score = 66.2 bits (160), Expect = 8e-09
Identities = 39/64 (60%), Positives = 44/64 (68%)
Frame = +3
Query: 477 QDYSTGVEIDASLSGAASLEKECAEVECPRKRGRAESCSRVGTKACREKLRREKLNDKFS 656
Q +S VEI++S S A KE E EC KR R SCS+ GTKACREKLRREKLNDKF
Sbjct: 126 QVFSGVVEINSSSSVGAV--KEEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFM 183
Query: 657 ELCS 668
+L S
Sbjct: 184 DLSS 187
>gb|AAM10939.1|AF488573_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 291
Score = 66.2 bits (160), Expect = 8e-09
Identities = 39/64 (60%), Positives = 44/64 (68%)
Frame = +3
Query: 477 QDYSTGVEIDASLSGAASLEKECAEVECPRKRGRAESCSRVGTKACREKLRREKLNDKFS 656
Q +S VEI++S S A KE E EC KR R SCS+ GTKACREKLRREKLNDKF
Sbjct: 97 QVFSGVVEINSSSSVGAV--KEEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFM 154
Query: 657 ELCS 668
+L S
Sbjct: 155 DLSS 158
>ref|XP_004497838.1| PREDICTED: transcription factor bHLH104-like [Cicer arietinum]
Length = 218
Score = 65.1 bits (157), Expect = 2e-08
Identities = 34/65 (52%), Positives = 43/65 (66%)
Frame = +3
Query: 468 WSNQDYSTGVEIDASLSGAASLEKECAEVECPRKRGRAESCSRVGTKACREKLRREKLND 647
WSN ST ++I SG + ++E RKRGR ESC + GTKACREKLRREKLN+
Sbjct: 30 WSNSSLSTEIDIP---SGVVACQEENT-----RKRGRTESCYKAGTKACREKLRREKLNE 81
Query: 648 KFSEL 662
+F +L
Sbjct: 82 RFCDL 86
>ref|XP_003590056.1| Transcription factor bHLH104 [Medicago truncatula]
gi|355479104|gb|AES60307.1| Transcription factor bHLH104
[Medicago truncatula] gi|356466277|gb|AET08955.1| basic
helix-loop-helix transcription factor [Medicago
truncatula]
Length = 246
Score = 64.3 bits (155), Expect = 3e-08
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 21/112 (18%)
Frame = +3
Query: 390 DGIDLI---DINSFINDVA--LQNSNDPYSYWSNQDYSTGVEIDASLSGAASLEKEC--- 545
D ++L+ D F+ D + + S + WSN + S E D S + A E+
Sbjct: 2 DSLELLENTDYLDFLGDYSPFIDPSPPTHFLWSNSNPSVSTEFDISSNVVACQEENTRKS 61
Query: 546 --AEVECP-----------RKRGRAESCSRVGTKACREKLRREKLNDKFSEL 662
E + P RKRGR ESC + GTKACREKLRREKLN++F +L
Sbjct: 62 VSTETDIPSGAVVCQEENTRKRGRTESCYKAGTKACREKLRREKLNERFCDL 113
>ref|XP_002314636.1| basic helix-loop-helix family protein [Populus trichocarpa]
gi|222863676|gb|EEF00807.1| basic helix-loop-helix
family protein [Populus trichocarpa]
Length = 221
Score = 64.3 bits (155), Expect = 3e-08
Identities = 33/71 (46%), Positives = 44/71 (61%)
Frame = +3
Query: 456 PYSYWSNQDYSTGVEIDASLSGAASLEKECAEVECPRKRGRAESCSRVGTKACREKLRRE 635
P +N S+G +D S + + + E C RKR R++ CSR GTKACREKLRRE
Sbjct: 23 PADSLTNSICSSGGVVDIDFSSSVGVVTQVKE--CSRKRERSDLCSRAGTKACREKLRRE 80
Query: 636 KLNDKFSELCS 668
+LND+F +L S
Sbjct: 81 RLNDRFQDLSS 91
>ref|XP_006370611.1| basic helix-loop-helix family protein [Populus trichocarpa]
gi|550349817|gb|ERP67180.1| basic helix-loop-helix
family protein [Populus trichocarpa]
Length = 264
Score = 63.5 bits (153), Expect = 5e-08
Identities = 34/59 (57%), Positives = 41/59 (69%)
Frame = +3
Query: 492 GVEIDASLSGAASLEKECAEVECPRKRGRAESCSRVGTKACREKLRREKLNDKFSELCS 668
G EID S G ++KE C +KRGR+ESCS +KACREKLRR++LNDKF EL S
Sbjct: 75 GAEIDGSF-GECDVQKE----PCSKKRGRSESCSASSSKACREKLRRDRLNDKFIELGS 128
>ref|XP_002319273.1| predicted protein [Populus trichocarpa]
Length = 260
Score = 63.5 bits (153), Expect = 5e-08
Identities = 34/59 (57%), Positives = 41/59 (69%)
Frame = +3
Query: 492 GVEIDASLSGAASLEKECAEVECPRKRGRAESCSRVGTKACREKLRREKLNDKFSELCS 668
G EID S G ++KE C +KRGR+ESCS +KACREKLRR++LNDKF EL S
Sbjct: 71 GAEIDGSF-GECDVQKE----PCSKKRGRSESCSASSSKACREKLRRDRLNDKFIELGS 124
>gb|ABK96448.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 263
Score = 63.5 bits (153), Expect = 5e-08
Identities = 34/59 (57%), Positives = 41/59 (69%)
Frame = +3
Query: 492 GVEIDASLSGAASLEKECAEVECPRKRGRAESCSRVGTKACREKLRREKLNDKFSELCS 668
G EID S G ++KE C +KRGR+ESCS +KACREKLRR++LNDKF EL S
Sbjct: 74 GAEIDGSF-GECDVQKE----PCSKKRGRSESCSASSSKACREKLRRDRLNDKFIELGS 127
>ref|XP_006352486.1| PREDICTED: transcription factor ILR3-like [Solanum tuberosum]
Length = 231
Score = 63.2 bits (152), Expect = 7e-08
Identities = 31/65 (47%), Positives = 40/65 (61%)
Frame = +3
Query: 468 WSNQDYSTGVEIDASLSGAASLEKECAEVECPRKRGRAESCSRVGTKACREKLRREKLND 647
WS Q ++ + G+ E +C + +KR RAESC+ +KACREKLRREKLND
Sbjct: 32 WSMQGFNGSTNASVDIDGSLG-ESDCLKESSCKKRTRAESCTSSSSKACREKLRREKLND 90
Query: 648 KFSEL 662
KF EL
Sbjct: 91 KFMEL 95