BLASTX nr result
ID: Catharanthus23_contig00004725
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00004725
(1301 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006451545.1| hypothetical protein CICLE_v10009459mg [Citr... 299 2e-78
gb|EOY30353.1| CFIM-25 isoform 1 [Theobroma cacao] 286 2e-74
ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation spec... 281 3e-73
emb|CBI27869.3| unnamed protein product [Vitis vinifera] 281 3e-73
gb|ESW10683.1| hypothetical protein PHAVU_009G229700g [Phaseolus... 275 4e-71
ref|XP_006342337.1| PREDICTED: cleavage and polyadenylation spec... 273 9e-71
gb|EXB38893.1| hypothetical protein L484_027328 [Morus notabilis] 271 3e-70
ref|XP_002308275.2| hypothetical protein POPTR_0006s14840g [Popu... 271 6e-70
ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, p... 269 2e-69
ref|XP_004513457.1| PREDICTED: cleavage and polyadenylation spec... 267 8e-69
ref|XP_004243736.1| PREDICTED: cleavage and polyadenylation spec... 265 2e-68
ref|XP_006412803.1| hypothetical protein EUTSA_v10026187mg [Eutr... 264 5e-68
ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation spec... 264 5e-68
ref|XP_006451544.1| hypothetical protein CICLE_v10009459mg [Citr... 261 3e-67
ref|XP_006294960.1| hypothetical protein CARUB_v10024016mg [Caps... 259 2e-66
ref|NP_567835.1| CFIM-25-like protein [Arabidopsis thaliana] gi|... 258 3e-66
ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arab... 257 6e-66
ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycin... 254 7e-65
gb|AFK34627.1| unknown [Medicago truncatula] 251 6e-64
gb|EOY30354.1| CFIM-25 isoform 2, partial [Theobroma cacao] 245 3e-62
>ref|XP_006451545.1| hypothetical protein CICLE_v10009459mg [Citrus clementina]
gi|568843220|ref|XP_006475514.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like isoform
X1 [Citrus sinensis] gi|557554771|gb|ESR64785.1|
hypothetical protein CICLE_v10009459mg [Citrus
clementina]
Length = 214
Score = 299 bits (765), Expect = 2e-78
Identities = 146/213 (68%), Positives = 169/213 (79%)
Frame = -2
Query: 1084 EIGAALHSNGAGTDCVNNDYVLDIYPLNHYYFGSKDAVPFKEETLADRVSRMKLNYDSRG 905
E+GA++ NG+ N YV+DIYPL+ YYFGSK+A+PFK+ETL +RV RMK NYD+ G
Sbjct: 4 EMGASVPINGSD----RNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHG 59
Query: 904 LRTSVQGVIXXXXXXXXXXXXXXLRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGDG 725
LRT V+ V+ +RNSIFKLPGGRLRPGESDI LKRKL KL++ DG
Sbjct: 60 LRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDG 119
Query: 724 REPDWEVGECIGMWWQPDFESLLYPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKLL 545
E DWEVGEC+GMWW+PDFE+LL+PY PPNVKRPKEC KLFLVKLP S+KF VPKN KLL
Sbjct: 120 GEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLL 179
Query: 544 AVPLCQLHENHKTYGPIISGVPQLLSKFSFNIV 446
AVPLCQ+HENHKTYG IISGVPQLLSKFSFNI+
Sbjct: 180 AVPLCQIHENHKTYGQIISGVPQLLSKFSFNII 212
>gb|EOY30353.1| CFIM-25 isoform 1 [Theobroma cacao]
Length = 219
Score = 286 bits (731), Expect = 2e-74
Identities = 136/193 (70%), Positives = 157/193 (81%)
Frame = -2
Query: 1021 LDIYPLNHYYFGSKDAVPFKEETLADRVSRMKLNYDSRGLRTSVQGVIXXXXXXXXXXXX 842
+DIYPL+ YYFGSK+ + FK+ETL+DR+ RMK NY + GLRTSV+ VI
Sbjct: 26 VDIYPLSCYYFGSKETIVFKDETLSDRIKRMKSNYAAHGLRTSVEAVILVELFKHPHLLL 85
Query: 841 XXLRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGDGREPDWEVGECIGMWWQPDFES 662
+RNSIFKLPGGRLRPGESDI+ L+RKL KL+ D E +WEVGEC+GMWW+ DFE+
Sbjct: 86 LQVRNSIFKLPGGRLRPGESDIDGLRRKLSRKLSASEDDSETEWEVGECLGMWWRHDFET 145
Query: 661 LLYPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKLLAVPLCQLHENHKTYGPIISGV 482
LLYPYLPPNVK+PKEC KLFLV+LPES KFIVPKN KLLAVPLCQ+HENHKTYGPIISGV
Sbjct: 146 LLYPYLPPNVKKPKECTKLFLVRLPESRKFIVPKNLKLLAVPLCQVHENHKTYGPIISGV 205
Query: 481 PQLLSKFSFNIVD 443
PQLLSKFS NI+D
Sbjct: 206 PQLLSKFSINIID 218
>ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Vitis vinifera]
Length = 284
Score = 281 bits (720), Expect = 3e-73
Identities = 138/198 (69%), Positives = 155/198 (78%)
Frame = -2
Query: 1036 NNDYVLDIYPLNHYYFGSKDAVPFKEETLADRVSRMKLNYDSRGLRTSVQGVIXXXXXXX 857
++++VLDIYPL+ YYFGSKD + KEETLADR+ RMK NY G RT V VI
Sbjct: 86 SSNHVLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVAVILVELFKH 145
Query: 856 XXXXXXXLRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGDGREPDWEVGECIGMWWQ 677
++NS FKLPGGRLRPGES+I LKRKL KL+V DG DWEVGEC+GMWW+
Sbjct: 146 PHLLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGECLGMWWR 205
Query: 676 PDFESLLYPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKLLAVPLCQLHENHKTYGP 497
PDFE+LLYPYLPPNVK PKEC KLFLVKLP S KFIVPKN KLLA+PLCQLHEN KTYGP
Sbjct: 206 PDFETLLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHENDKTYGP 265
Query: 496 IISGVPQLLSKFSFNIVD 443
II+GVPQLLSKFSFNI+D
Sbjct: 266 IIAGVPQLLSKFSFNIID 283
>emb|CBI27869.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 281 bits (720), Expect = 3e-73
Identities = 138/198 (69%), Positives = 155/198 (78%)
Frame = -2
Query: 1036 NNDYVLDIYPLNHYYFGSKDAVPFKEETLADRVSRMKLNYDSRGLRTSVQGVIXXXXXXX 857
++++VLDIYPL+ YYFGSKD + KEETLADR+ RMK NY G RT V VI
Sbjct: 93 SSNHVLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVAVILVELFKH 152
Query: 856 XXXXXXXLRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGDGREPDWEVGECIGMWWQ 677
++NS FKLPGGRLRPGES+I LKRKL KL+V DG DWEVGEC+GMWW+
Sbjct: 153 PHLLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGECLGMWWR 212
Query: 676 PDFESLLYPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKLLAVPLCQLHENHKTYGP 497
PDFE+LLYPYLPPNVK PKEC KLFLVKLP S KFIVPKN KLLA+PLCQLHEN KTYGP
Sbjct: 213 PDFETLLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHENDKTYGP 272
Query: 496 IISGVPQLLSKFSFNIVD 443
II+GVPQLLSKFSFNI+D
Sbjct: 273 IIAGVPQLLSKFSFNIID 290
>gb|ESW10683.1| hypothetical protein PHAVU_009G229700g [Phaseolus vulgaris]
Length = 217
Score = 275 bits (702), Expect = 4e-71
Identities = 131/209 (62%), Positives = 160/209 (76%)
Frame = -2
Query: 1069 LHSNGAGTDCVNNDYVLDIYPLNHYYFGSKDAVPFKEETLADRVSRMKLNYDSRGLRTSV 890
LH G + N ++ DIYPL+ YYFGSKDA+PFK+ T + R++ NY +RGLRTSV
Sbjct: 10 LHDGNRGNEDQNLEF--DIYPLSSYYFGSKDAIPFKDHTQHHHLLRIQSNYAARGLRTSV 67
Query: 889 QGVIXXXXXXXXXXXXXXLRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGDGREPDW 710
+ V+ +RNSI+KLPGGRLRPGESD + LKRKL KL V DG +W
Sbjct: 68 EAVLLVELFKHPHLLLLQVRNSIYKLPGGRLRPGESDTDGLKRKLTRKLCVDEDGDGSEW 127
Query: 709 EVGECIGMWWQPDFESLLYPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKLLAVPLC 530
EVGEC+GMWW+PDFE+LLYP+LPPN+K+PKEC K+FLVKLP S+KFIVPKN +LLAVPLC
Sbjct: 128 EVGECLGMWWRPDFETLLYPFLPPNIKQPKECTKVFLVKLPASQKFIVPKNMRLLAVPLC 187
Query: 529 QLHENHKTYGPIISGVPQLLSKFSFNIVD 443
Q+HENHKTYG IISGVPQLLSKF FN+++
Sbjct: 188 QVHENHKTYGEIISGVPQLLSKFCFNMME 216
>ref|XP_006342337.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Solanum tuberosum]
Length = 202
Score = 273 bits (699), Expect = 9e-71
Identities = 130/195 (66%), Positives = 159/195 (81%), Gaps = 1/195 (0%)
Frame = -2
Query: 1024 VLDIYPLNHYYFGSKDAVPFKEE-TLADRVSRMKLNYDSRGLRTSVQGVIXXXXXXXXXX 848
VLDIYPLNHYYFGSK+++P KEE TL R+ R+K NY++ G+RT VQ VI
Sbjct: 8 VLDIYPLNHYYFGSKESLPLKEEETLDHRIQRLKFNYNTHGIRTCVQAVILVDLFKHPHL 67
Query: 847 XXXXLRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGDGREPDWEVGECIGMWWQPDF 668
+R+S++KLPGGRLRPGES+IECL+RKL SKL++ + + WEVGEC+GMWW+PDF
Sbjct: 68 LLLQVRHSMYKLPGGRLRPGESEIECLRRKLSSKLSMSEE--DDRWEVGECLGMWWRPDF 125
Query: 667 ESLLYPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKLLAVPLCQLHENHKTYGPIIS 488
E+L+YP+LPPN+KRPKEC KLFLV+LPES KFIVPKN KL+AVPLCQ+HEN KTYGPII+
Sbjct: 126 ETLIYPFLPPNIKRPKECTKLFLVRLPESCKFIVPKNLKLIAVPLCQVHENFKTYGPIIA 185
Query: 487 GVPQLLSKFSFNIVD 443
GVPQLLSKFS+N D
Sbjct: 186 GVPQLLSKFSYNTPD 200
>gb|EXB38893.1| hypothetical protein L484_027328 [Morus notabilis]
Length = 221
Score = 271 bits (694), Expect = 3e-70
Identities = 135/200 (67%), Positives = 154/200 (77%), Gaps = 6/200 (3%)
Frame = -2
Query: 1024 VLDIYPLNHYYFGSKDAVPFKEETLADRVSRMK------LNYDSRGLRTSVQGVIXXXXX 863
VLDIYPL+ YYFGSK+A+P K+E LADR+ RMK Y +RGLR V+ VI
Sbjct: 21 VLDIYPLSSYYFGSKEALPLKDENLADRLLRMKSKYHFSTGYSARGLRACVEAVILVELF 80
Query: 862 XXXXXXXXXLRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGDGREPDWEVGECIGMW 683
+RNSIFKLPGGRLRPGESDI+ LKRKL KL+ + DWEVGEC+G W
Sbjct: 81 KHPHLLLLQVRNSIFKLPGGRLRPGESDIDGLKRKLSRKLSANENSGGVDWEVGECLGKW 140
Query: 682 WQPDFESLLYPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKLLAVPLCQLHENHKTY 503
W+PDFE+LLYPYL PNVKRPKEC KL+LVKLPES KFIVPK+ KLLAVPLCQ+HENHKTY
Sbjct: 141 WRPDFETLLYPYLSPNVKRPKECTKLYLVKLPESRKFIVPKDLKLLAVPLCQVHENHKTY 200
Query: 502 GPIISGVPQLLSKFSFNIVD 443
G IISGVPQLLSKFSFNI++
Sbjct: 201 GSIISGVPQLLSKFSFNIIE 220
>ref|XP_002308275.2| hypothetical protein POPTR_0006s14840g [Populus trichocarpa]
gi|550336365|gb|EEE91798.2| hypothetical protein
POPTR_0006s14840g [Populus trichocarpa]
Length = 258
Score = 271 bits (692), Expect = 6e-70
Identities = 132/213 (61%), Positives = 160/213 (75%)
Frame = -2
Query: 1087 AEIGAALHSNGAGTDCVNNDYVLDIYPLNHYYFGSKDAVPFKEETLADRVSRMKLNYDSR 908
AE+ HS + + V++IYPL YYFGSKD + F++ET+ADRV RMK N+ +R
Sbjct: 45 AELKMGDHSVTVTDNNNHQSTVIEIYPLGSYYFGSKDPIAFRDETIADRVQRMKSNFSAR 104
Query: 907 GLRTSVQGVIXXXXXXXXXXXXXXLRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGD 728
GLRTSVQ V+ +RN+ FKLPGGRLRPGESDI+ L+RKL S++ V +
Sbjct: 105 GLRTSVQAVMLVELFKHPHLLLLQVRNAFFKLPGGRLRPGESDIDGLQRKL-SRMLSVNE 163
Query: 727 GREPDWEVGECIGMWWQPDFESLLYPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKL 548
WEVG+C+GMWW+ DFE+LLYPYLPPN+K PKEC KL++VKLP S KFIVPKN KL
Sbjct: 164 DETDHWEVGDCLGMWWRSDFETLLYPYLPPNLKVPKECTKLYVVKLPASRKFIVPKNLKL 223
Query: 547 LAVPLCQLHENHKTYGPIISGVPQLLSKFSFNI 449
LAVPLCQ+HENHKTYGP+ISGVPQLLSKFSFNI
Sbjct: 224 LAVPLCQVHENHKTYGPVISGVPQLLSKFSFNI 256
>ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
communis] gi|223546548|gb|EEF48046.1| pre-mRNA cleavage
factor im, 25kD subunit, putative [Ricinus communis]
Length = 214
Score = 269 bits (688), Expect = 2e-69
Identities = 132/195 (67%), Positives = 154/195 (78%)
Frame = -2
Query: 1027 YVLDIYPLNHYYFGSKDAVPFKEETLADRVSRMKLNYDSRGLRTSVQGVIXXXXXXXXXX 848
+VLDIYPL+ YYFGSKD +PF++ETL DRV RMK NY + GLRT V+ VI
Sbjct: 21 FVLDIYPLSRYYFGSKDPLPFRDETLVDRVQRMKSNYLAHGLRTCVEAVILVELFKHPHL 80
Query: 847 XXXXLRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGDGREPDWEVGECIGMWWQPDF 668
++NSIFKLPGGR+RPGESDI LKRKL KL+ D + DWEVGEC+GMWW+PDF
Sbjct: 81 LLLQIKNSIFKLPGGRIRPGESDIGGLKRKLSRKLSNNQD--QTDWEVGECLGMWWRPDF 138
Query: 667 ESLLYPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKLLAVPLCQLHENHKTYGPIIS 488
E+LLYPYLPPN+K PKEC KLFLV+LP S KFIVPKN KLLAVPL Q+H+NHKTYG IIS
Sbjct: 139 ETLLYPYLPPNLKTPKECTKLFLVRLPTSCKFIVPKNLKLLAVPLSQIHDNHKTYGGIIS 198
Query: 487 GVPQLLSKFSFNIVD 443
GVPQLLSK+SF I++
Sbjct: 199 GVPQLLSKYSFRIIN 213
>ref|XP_004513457.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform X3 [Cicer arietinum]
Length = 202
Score = 267 bits (682), Expect = 8e-69
Identities = 124/191 (64%), Positives = 152/191 (79%)
Frame = -2
Query: 1015 IYPLNHYYFGSKDAVPFKEETLADRVSRMKLNYDSRGLRTSVQGVIXXXXXXXXXXXXXX 836
IYPLN YYFG KD++P K+ +L DR+ R++ NY +RG+RT V+ VI
Sbjct: 11 IYPLNCYYFGFKDSIPSKDHSLHDRLQRIQSNYAARGMRTCVEAVIMVELFKHPHLLLFQ 70
Query: 835 LRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGDGREPDWEVGECIGMWWQPDFESLL 656
++N IFKLPGGRLRPGESDI+ LKRKL KL+V DG +WEVGEC+GMWW+PDFE+L+
Sbjct: 71 IKNLIFKLPGGRLRPGESDIDGLKRKLGRKLSVDEDGDGAEWEVGECLGMWWRPDFETLM 130
Query: 655 YPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKLLAVPLCQLHENHKTYGPIISGVPQ 476
YP+LPPNVK PKEC KLFLVKLPES +F VP+N KLL+VPLCQ+HENHKTYGPIIS +PQ
Sbjct: 131 YPFLPPNVKHPKECTKLFLVKLPESRRFTVPRNMKLLSVPLCQIHENHKTYGPIISRIPQ 190
Query: 475 LLSKFSFNIVD 443
LLSKFSFN+++
Sbjct: 191 LLSKFSFNMIE 201
>ref|XP_004243736.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Solanum lycopersicum]
Length = 202
Score = 265 bits (678), Expect = 2e-68
Identities = 129/196 (65%), Positives = 156/196 (79%), Gaps = 2/196 (1%)
Frame = -2
Query: 1024 VLDIYPLNHYYFGSKDAVPFKEE-TLADRVSRMKLNYDSRGLRTSVQGVIXXXXXXXXXX 848
V+DIYPLNHYYFGSK+++P KEE TL R+ R K NY++ G+RT VQ V+
Sbjct: 8 VMDIYPLNHYYFGSKESLPLKEEETLDHRIQRFKFNYNTHGIRTCVQAVLLVDLFKHPHL 67
Query: 847 XXXXLRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGDGREPD-WEVGECIGMWWQPD 671
+R+S++KLPGGRLRPGES+IECL+RKL SKL++ E D WEVGEC+GMWW+PD
Sbjct: 68 LLLQVRHSLYKLPGGRLRPGESEIECLRRKLSSKLSM---SEEYDRWEVGECLGMWWRPD 124
Query: 670 FESLLYPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKLLAVPLCQLHENHKTYGPII 491
FE+L+Y LPPN+KRPKEC KLFLV+LPES KFIVPKN KL+AVPLCQ+HEN KTYGPII
Sbjct: 125 FETLIYLVLPPNIKRPKECTKLFLVRLPESCKFIVPKNLKLIAVPLCQVHENFKTYGPII 184
Query: 490 SGVPQLLSKFSFNIVD 443
+GVPQLLSKFS+N D
Sbjct: 185 AGVPQLLSKFSYNTPD 200
>ref|XP_006412803.1| hypothetical protein EUTSA_v10026187mg [Eutrema salsugineum]
gi|557113973|gb|ESQ54256.1| hypothetical protein
EUTSA_v10026187mg [Eutrema salsugineum]
Length = 222
Score = 264 bits (675), Expect = 5e-68
Identities = 124/197 (62%), Positives = 156/197 (79%)
Frame = -2
Query: 1033 NDYVLDIYPLNHYYFGSKDAVPFKEETLADRVSRMKLNYDSRGLRTSVQGVIXXXXXXXX 854
ND ++D+YPL+ YYFGS+DA+ K+E ++DRV R+K NY + GLRT V+ V+
Sbjct: 25 NDLIVDLYPLSSYYFGSRDALRVKDENISDRVDRLKSNYAAHGLRTCVEAVLLVELFKHP 84
Query: 853 XXXXXXLRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGDGREPDWEVGECIGMWWQP 674
RNSIFKLPGGRLRPGESDIE LKRKL SKL++ + P EVGECIGMWW+P
Sbjct: 85 HALLLQYRNSIFKLPGGRLRPGESDIEGLKRKLASKLSINENVVVPGSEVGECIGMWWRP 144
Query: 673 DFESLLYPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKLLAVPLCQLHENHKTYGPI 494
+FESL+YP+LPPNVK PKEC KLFLV+LP +++F+VPKN KLLAVPLCQ+HEN KTYGPI
Sbjct: 145 NFESLMYPFLPPNVKHPKECTKLFLVRLPVNQQFVVPKNFKLLAVPLCQIHENEKTYGPI 204
Query: 493 ISGVPQLLSKFSFNIVD 443
IS +P+LLS+FSFN+++
Sbjct: 205 ISQIPKLLSRFSFNMME 221
>ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cucumis sativus] gi|449488056|ref|XP_004157928.1|
PREDICTED: cleavage and polyadenylation specificity
factor subunit 5-like [Cucumis sativus]
Length = 217
Score = 264 bits (675), Expect = 5e-68
Identities = 126/192 (65%), Positives = 149/192 (77%)
Frame = -2
Query: 1021 LDIYPLNHYYFGSKDAVPFKEETLADRVSRMKLNYDSRGLRTSVQGVIXXXXXXXXXXXX 842
+DIYPL++YYFGSK+ + FK+ETL+DRV RMK NY + GLRT V+ V+
Sbjct: 24 IDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLL 83
Query: 841 XXLRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGDGREPDWEVGECIGMWWQPDFES 662
+RNSIFKLPGGR+RP ESDI+ L RKL KL+ G WEV EC+GMWW+PDFE+
Sbjct: 84 FQIRNSIFKLPGGRIRPNESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFET 143
Query: 661 LLYPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKLLAVPLCQLHENHKTYGPIISGV 482
LL+PYL NVK KEC KLFLVKLPES KF+VPKN KL+AVPLCQ+HENHKTYGPIISG+
Sbjct: 144 LLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPIISGI 203
Query: 481 PQLLSKFSFNIV 446
PQLLSKFSFNI+
Sbjct: 204 PQLLSKFSFNII 215
>ref|XP_006451544.1| hypothetical protein CICLE_v10009459mg [Citrus clementina]
gi|557554770|gb|ESR64784.1| hypothetical protein
CICLE_v10009459mg [Citrus clementina]
Length = 196
Score = 261 bits (668), Expect = 3e-67
Identities = 127/192 (66%), Positives = 149/192 (77%)
Frame = -2
Query: 1084 EIGAALHSNGAGTDCVNNDYVLDIYPLNHYYFGSKDAVPFKEETLADRVSRMKLNYDSRG 905
E+GA++ NG+ N YV+DIYPL+ YYFGSK+A+PFK+ETL +RV RMK NYD+ G
Sbjct: 4 EMGASVPINGSD----RNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHG 59
Query: 904 LRTSVQGVIXXXXXXXXXXXXXXLRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGDG 725
LRT V+ V+ +RNSIFKLPGGRLRPGESDI LKRKL KL++ DG
Sbjct: 60 LRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDG 119
Query: 724 REPDWEVGECIGMWWQPDFESLLYPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKLL 545
E DWEVGEC+GMWW+PDFE+LL+PY PPNVKRPKEC KLFLVKLP S+KF VPKN KLL
Sbjct: 120 GEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLL 179
Query: 544 AVPLCQLHENHK 509
AVPLCQ+HENHK
Sbjct: 180 AVPLCQIHENHK 191
>ref|XP_006294960.1| hypothetical protein CARUB_v10024016mg [Capsella rubella]
gi|482563668|gb|EOA27858.1| hypothetical protein
CARUB_v10024016mg [Capsella rubella]
Length = 222
Score = 259 bits (661), Expect = 2e-66
Identities = 122/199 (61%), Positives = 157/199 (78%)
Frame = -2
Query: 1039 VNNDYVLDIYPLNHYYFGSKDAVPFKEETLADRVSRMKLNYDSRGLRTSVQGVIXXXXXX 860
+++D ++D+YPL+ YYFGS+DA+ K+E ++DRV R+K NY + GLRT V+ V+
Sbjct: 23 IDHDVMVDLYPLSSYYFGSRDALRVKDEIISDRVIRLKSNYAAHGLRTCVEAVLLVELFK 82
Query: 859 XXXXXXXXLRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGDGREPDWEVGECIGMWW 680
RNSIFKLPGGRLRPGESDI+ LKRKL SKL++ + P EVGEC+GMWW
Sbjct: 83 HPHVLLLQFRNSIFKLPGGRLRPGESDIQGLKRKLGSKLSINENVVVPGLEVGECLGMWW 142
Query: 679 QPDFESLLYPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKLLAVPLCQLHENHKTYG 500
+P+FE+L+YP+LPPNVK PKEC KLFLV+LP ++F+VPKN KLLAVPLCQLHEN KTYG
Sbjct: 143 RPNFETLMYPFLPPNVKHPKECSKLFLVRLPVHQQFVVPKNFKLLAVPLCQLHENEKTYG 202
Query: 499 PIISGVPQLLSKFSFNIVD 443
PIIS +P+LLSKFSFN+++
Sbjct: 203 PIISQIPKLLSKFSFNMME 221
>ref|NP_567835.1| CFIM-25-like protein [Arabidopsis thaliana]
gi|15081674|gb|AAK82492.1| AT4g29820/F27B13_60
[Arabidopsis thaliana] gi|20147173|gb|AAM10303.1|
AT4g29820/F27B13_60 [Arabidopsis thaliana]
gi|21554114|gb|AAM63194.1| mRNA cleavage factor
subunit-like protein [Arabidopsis thaliana]
gi|332660282|gb|AEE85682.1| CFIM-25-like protein
[Arabidopsis thaliana]
Length = 222
Score = 258 bits (660), Expect = 3e-66
Identities = 123/199 (61%), Positives = 156/199 (78%)
Frame = -2
Query: 1039 VNNDYVLDIYPLNHYYFGSKDAVPFKEETLADRVSRMKLNYDSRGLRTSVQGVIXXXXXX 860
V +D ++D+YPL+ YYFGSK+A+ K+E ++DRV R+K NY + GLRT V+ V+
Sbjct: 23 VVHDLMVDLYPLSSYYFGSKEALRVKDEIISDRVIRLKSNYAAHGLRTCVEAVLLVELFK 82
Query: 859 XXXXXXXXLRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGDGREPDWEVGECIGMWW 680
RNSIFKLPGGRLRPGESDIE LKRKL SKL+V + +EVGECIGMWW
Sbjct: 83 HPHVLLLQYRNSIFKLPGGRLRPGESDIEGLKRKLASKLSVNENVGVSGYEVGECIGMWW 142
Query: 679 QPDFESLLYPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKLLAVPLCQLHENHKTYG 500
+P+FE+L+YP+LPPN+K PKEC KLFLV+LP ++F+VPKN KLLAVPLCQLHEN KTYG
Sbjct: 143 RPNFETLMYPFLPPNIKHPKECTKLFLVRLPVHQQFVVPKNFKLLAVPLCQLHENEKTYG 202
Query: 499 PIISGVPQLLSKFSFNIVD 443
PI+S +P+LLSKFSFN+++
Sbjct: 203 PIMSQIPKLLSKFSFNMME 221
>ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arabidopsis lyrata subsp.
lyrata] gi|297313222|gb|EFH43645.1| hypothetical protein
ARALYDRAFT_491776 [Arabidopsis lyrata subsp. lyrata]
Length = 223
Score = 257 bits (657), Expect = 6e-66
Identities = 123/199 (61%), Positives = 156/199 (78%)
Frame = -2
Query: 1039 VNNDYVLDIYPLNHYYFGSKDAVPFKEETLADRVSRMKLNYDSRGLRTSVQGVIXXXXXX 860
V +D ++++YPL+ YYF S+DA+ K+E ++DRV R+K NY + GLRT V+ V+
Sbjct: 24 VVHDLMVELYPLSSYYFSSRDALRVKDEIISDRVIRLKSNYAAHGLRTCVEAVLLVELLK 83
Query: 859 XXXXXXXXLRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGDGREPDWEVGECIGMWW 680
RNSIFKLPGGRLRPGESDIE +KRKL SKL+V + P EVGECIGMWW
Sbjct: 84 HPHVLLLQYRNSIFKLPGGRLRPGESDIEGVKRKLASKLSVNENVVVPGLEVGECIGMWW 143
Query: 679 QPDFESLLYPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKLLAVPLCQLHENHKTYG 500
+P+FE+L+YP+LPPNVK PKEC KLFLV+LP +++F+VPKN KLLAVPLCQLHEN KTYG
Sbjct: 144 RPNFETLMYPFLPPNVKHPKECTKLFLVRLPVNQQFVVPKNFKLLAVPLCQLHENEKTYG 203
Query: 499 PIISGVPQLLSKFSFNIVD 443
PIIS +P+LLSKFSFN+++
Sbjct: 204 PIISQIPKLLSKFSFNMME 222
>ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycine max]
gi|255640824|gb|ACU20695.1| unknown [Glycine max]
Length = 216
Score = 254 bits (648), Expect = 7e-65
Identities = 122/196 (62%), Positives = 149/196 (76%)
Frame = -2
Query: 1072 ALHSNGAGTDCVNNDYVLDIYPLNHYYFGSKDAVPFKEETLADRVSRMKLNYDSRGLRTS 893
ALH +G D + ++ DIYPL+ YYFGSKDAVP K+ TL DRV RMK NY + G+RT
Sbjct: 13 ALHHPNSGNDDQSLEF--DIYPLSSYYFGSKDAVPSKDLTLVDRVLRMKSNYAASGIRTC 70
Query: 892 VQGVIXXXXXXXXXXXXXXLRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGDGREPD 713
V+ V+ +RNSI+KLPGGRLRPGESD + LKRKL KL+V DG +
Sbjct: 71 VEAVLLVELFKHPHLLLLQIRNSIYKLPGGRLRPGESDTDGLKRKLARKLSVNEDGDGSE 130
Query: 712 WEVGECIGMWWQPDFESLLYPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKLLAVPL 533
WEVGEC+GMWW+PDFE+L+YP++PPNV++PKEC K+FLVKLPES K IVPKN ++LAVPL
Sbjct: 131 WEVGECLGMWWRPDFETLMYPFIPPNVEKPKECTKVFLVKLPESRKLIVPKNMRVLAVPL 190
Query: 532 CQLHENHKTYGPIISG 485
CQ+HENHKTYG IISG
Sbjct: 191 CQVHENHKTYGQIISG 206
>gb|AFK34627.1| unknown [Medicago truncatula]
Length = 205
Score = 251 bits (640), Expect = 6e-64
Identities = 124/206 (60%), Positives = 151/206 (73%), Gaps = 1/206 (0%)
Frame = -2
Query: 1060 NGAGTDCVNNDYVLDIYPLNHYYFGSK-DAVPFKEETLADRVSRMKLNYDSRGLRTSVQG 884
NG D + ++IYPLN YYFGSK DA+P K+ +L R K NYD+RG+RT V+
Sbjct: 4 NGIRDDDDDEKVEVNIYPLNSYYFGSKEDAIPSKDHSL----QRFKSNYDARGMRTCVEA 59
Query: 883 VIXXXXXXXXXXXXXXLRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGDGREPDWEV 704
V+ ++NSIFKLPGGRLRPGESD + LKRKL KL+ D +WEV
Sbjct: 60 VMMVELFKHPHLLLFQIKNSIFKLPGGRLRPGESDTDGLKRKLARKLSA--DENLAEWEV 117
Query: 703 GECIGMWWQPDFESLLYPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKLLAVPLCQL 524
GEC+GMWW+PDFE+ +YP+LPPNVK PKEC KLFLV+LPES +F VPKN KLL+VPLCQ+
Sbjct: 118 GECLGMWWRPDFETSMYPFLPPNVKHPKECTKLFLVRLPESRRFTVPKNMKLLSVPLCQI 177
Query: 523 HENHKTYGPIISGVPQLLSKFSFNIV 446
+NHKTYGPIIS VPQLLSKFSFN++
Sbjct: 178 RDNHKTYGPIISAVPQLLSKFSFNMI 203
>gb|EOY30354.1| CFIM-25 isoform 2, partial [Theobroma cacao]
Length = 242
Score = 245 bits (626), Expect = 3e-62
Identities = 116/171 (67%), Positives = 136/171 (79%)
Frame = -2
Query: 1021 LDIYPLNHYYFGSKDAVPFKEETLADRVSRMKLNYDSRGLRTSVQGVIXXXXXXXXXXXX 842
+DIYPL+ YYFGSK+ + FK+ETL+DR+ RMK NY + GLRTSV+ VI
Sbjct: 14 VDIYPLSCYYFGSKETIVFKDETLSDRIKRMKSNYAAHGLRTSVEAVILVELFKHPHLLL 73
Query: 841 XXLRNSIFKLPGGRLRPGESDIECLKRKLLSKLAVVGDGREPDWEVGECIGMWWQPDFES 662
+RNSIFKLPGGRLRPGESDI+ L+RKL KL+ D E +WEVGEC+GMWW+ DFE+
Sbjct: 74 LQVRNSIFKLPGGRLRPGESDIDGLRRKLSRKLSASEDDSETEWEVGECLGMWWRHDFET 133
Query: 661 LLYPYLPPNVKRPKECIKLFLVKLPESEKFIVPKNQKLLAVPLCQLHENHK 509
LLYPYLPPNVK+PKEC KLFLV+LPES KFIVPKN KLLAVPLCQ+HENHK
Sbjct: 134 LLYPYLPPNVKKPKECTKLFLVRLPESRKFIVPKNLKLLAVPLCQVHENHK 184