BLASTX nr result

ID: Catharanthus23_contig00004640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00004640
         (316 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006493195.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    93   3e-17
ref|XP_006347508.1| PREDICTED: pre-mRNA-splicing factor SF2 isof...    93   3e-17
ref|XP_006347507.1| PREDICTED: pre-mRNA-splicing factor SF2 isof...    93   3e-17
ref|XP_006441230.1| hypothetical protein CICLE_v10021646mg [Citr...    93   3e-17
ref|XP_006441229.1| hypothetical protein CICLE_v10021646mg [Citr...    93   3e-17
ref|XP_004235015.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    93   3e-17
ref|NP_001275408.1| pre-mRNA splicing factor-like protein [Solan...    93   3e-17
ref|XP_006376671.1| pre-mRNA splicing factor family protein [Pop...    93   4e-17
ref|XP_006374084.1| hypothetical protein POPTR_0015s00690g [Popu...    93   4e-17
ref|XP_002318458.1| predicted protein [Populus trichocarpa]            93   4e-17
ref|XP_006404145.1| hypothetical protein EUTSA_v10010586mg [Eutr...    92   5e-17
gb|ESW08439.1| hypothetical protein PHAVU_009G046000g [Phaseolus...    92   7e-17
gb|EOY23696.1| SER/ARG-rich protein 34A [Theobroma cacao]              92   7e-17
ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    92   9e-17
ref|XP_002519893.1| arginine/serine-rich splicing factor, putati...    92   9e-17
emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera]    92   9e-17
ref|XP_006581683.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    91   1e-16
ref|XP_006581682.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    91   1e-16
ref|XP_006581678.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    91   1e-16
ref|XP_006577814.1| PREDICTED: uncharacterized protein LOC100786...    91   1e-16

>ref|XP_006493195.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X1 [Citrus
           sinensis] gi|568880594|ref|XP_006493196.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform X2 [Citrus
           sinensis] gi|568880596|ref|XP_006493197.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform X3 [Citrus
           sinensis]
          Length = 277

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGR++DIELKIPPRPPCYCFVEFE+ARDAEDAIRGRDG
Sbjct: 25  DLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67


>ref|XP_006347508.1| PREDICTED: pre-mRNA-splicing factor SF2 isoform X2 [Solanum
           tuberosum]
          Length = 271

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGR++DIELKIPPRPPCYCFVEFES+RDAEDAIRGRDG
Sbjct: 25  DLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAEDAIRGRDG 67


>ref|XP_006347507.1| PREDICTED: pre-mRNA-splicing factor SF2 isoform X1 [Solanum
           tuberosum]
          Length = 273

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGR++DIELKIPPRPPCYCFVEFES+RDAEDAIRGRDG
Sbjct: 25  DLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAEDAIRGRDG 67


>ref|XP_006441230.1| hypothetical protein CICLE_v10021646mg [Citrus clementina]
           gi|557543492|gb|ESR54470.1| hypothetical protein
           CICLE_v10021646mg [Citrus clementina]
          Length = 271

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGR++DIELKIPPRPPCYCFVEFE+ARDAEDAIRGRDG
Sbjct: 25  DLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67


>ref|XP_006441229.1| hypothetical protein CICLE_v10021646mg [Citrus clementina]
           gi|567897486|ref|XP_006441231.1| hypothetical protein
           CICLE_v10021646mg [Citrus clementina]
           gi|567897488|ref|XP_006441232.1| hypothetical protein
           CICLE_v10021646mg [Citrus clementina]
           gi|567897490|ref|XP_006441233.1| hypothetical protein
           CICLE_v10021646mg [Citrus clementina]
           gi|557543491|gb|ESR54469.1| hypothetical protein
           CICLE_v10021646mg [Citrus clementina]
           gi|557543493|gb|ESR54471.1| hypothetical protein
           CICLE_v10021646mg [Citrus clementina]
           gi|557543494|gb|ESR54472.1| hypothetical protein
           CICLE_v10021646mg [Citrus clementina]
           gi|557543495|gb|ESR54473.1| hypothetical protein
           CICLE_v10021646mg [Citrus clementina]
          Length = 271

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGR++DIELKIPPRPPCYCFVEFE+ARDAEDAIRGRDG
Sbjct: 25  DLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67


>ref|XP_004235015.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Solanum lycopersicum]
          Length = 288

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGR++DIELKIPPRPPCYCFVEFES+RDAEDAIRGRDG
Sbjct: 25  DLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAEDAIRGRDG 67


>ref|NP_001275408.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
           gi|76573323|gb|ABA46766.1| pre-mRNA splicing factor-like
           protein [Solanum tuberosum]
          Length = 269

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGR++DIELKIPPRPPCYCFVEFES+RDAEDAIRGRDG
Sbjct: 25  DLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAEDAIRGRDG 67


>ref|XP_006376671.1| pre-mRNA splicing factor family protein [Populus trichocarpa]
           gi|550326255|gb|ERP54468.1| pre-mRNA splicing factor
           family protein [Populus trichocarpa]
          Length = 279

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 39/43 (90%), Positives = 43/43 (100%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGR++D+ELKIPPRPPCYCFVEFE+ARDAEDAIRGRDG
Sbjct: 25  DLFYKYGRILDVELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67


>ref|XP_006374084.1| hypothetical protein POPTR_0015s00690g [Populus trichocarpa]
           gi|550321685|gb|ERP51881.1| hypothetical protein
           POPTR_0015s00690g [Populus trichocarpa]
          Length = 260

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 39/43 (90%), Positives = 43/43 (100%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGR++D+ELKIPPRPPCYCFVEFE+ARDAEDAIRGRDG
Sbjct: 25  DLFYKYGRILDVELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67


>ref|XP_002318458.1| predicted protein [Populus trichocarpa]
          Length = 280

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 39/43 (90%), Positives = 43/43 (100%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGR++D+ELKIPPRPPCYCFVEFE+ARDAEDAIRGRDG
Sbjct: 25  DLFYKYGRILDVELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67


>ref|XP_006404145.1| hypothetical protein EUTSA_v10010586mg [Eutrema salsugineum]
           gi|557105264|gb|ESQ45598.1| hypothetical protein
           EUTSA_v10010586mg [Eutrema salsugineum]
          Length = 293

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 39/43 (90%), Positives = 42/43 (97%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGR++DIELK+PPRPPCYCFVEFE ARDAEDAIRGRDG
Sbjct: 25  DLFYKYGRIVDIELKVPPRPPCYCFVEFEHARDAEDAIRGRDG 67


>gb|ESW08439.1| hypothetical protein PHAVU_009G046000g [Phaseolus vulgaris]
           gi|561009533|gb|ESW08440.1| hypothetical protein
           PHAVU_009G046000g [Phaseolus vulgaris]
          Length = 260

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGRV+DIELKIPPRPPCYCFVEF++ARDAEDAIRGRDG
Sbjct: 25  DLFYKYGRVMDIELKIPPRPPCYCFVEFDNARDAEDAIRGRDG 67


>gb|EOY23696.1| SER/ARG-rich protein 34A [Theobroma cacao]
          Length = 424

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 39/43 (90%), Positives = 43/43 (100%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGR++DIELKIPPRPPCYCFVEFE++RDAEDAIRGRDG
Sbjct: 25  DLFYKYGRILDIELKIPPRPPCYCFVEFENSRDAEDAIRGRDG 67


>ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
           vinifera] gi|359490739|ref|XP_003634149.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
           vinifera] gi|302143975|emb|CBI23080.3| unnamed protein
           product [Vitis vinifera]
          Length = 250

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 38/43 (88%), Positives = 43/43 (100%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGR++D+ELKIPPRPPCYCFVEFE++RDAEDAIRGRDG
Sbjct: 25  DLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAEDAIRGRDG 67


>ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223540939|gb|EEF42497.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 264

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 39/43 (90%), Positives = 42/43 (97%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGR++DIELKIPPRPPCYCFVEFE+ RDAEDAIRGRDG
Sbjct: 25  DLFYKYGRILDIELKIPPRPPCYCFVEFENTRDAEDAIRGRDG 67


>emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera]
          Length = 267

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 38/43 (88%), Positives = 43/43 (100%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGR++D+ELKIPPRPPCYCFVEFE++RDAEDAIRGRDG
Sbjct: 25  DLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAEDAIRGRDG 67


>ref|XP_006581683.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X7 [Glycine
           max]
          Length = 262

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 38/43 (88%), Positives = 43/43 (100%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGR++DIELK+PPRPPCYCFVEF++ARDAEDAIRGRDG
Sbjct: 25  DLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDG 67


>ref|XP_006581682.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X6 [Glycine
           max]
          Length = 299

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 38/43 (88%), Positives = 43/43 (100%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGR++DIELK+PPRPPCYCFVEF++ARDAEDAIRGRDG
Sbjct: 25  DLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDG 67


>ref|XP_006581678.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X2 [Glycine
           max] gi|571460367|ref|XP_006581679.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform X3 [Glycine
           max] gi|571460369|ref|XP_006581680.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform X4 [Glycine
           max] gi|571460371|ref|XP_006581681.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform X5 [Glycine
           max]
          Length = 300

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 38/43 (88%), Positives = 43/43 (100%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGR++DIELK+PPRPPCYCFVEF++ARDAEDAIRGRDG
Sbjct: 25  DLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDG 67


>ref|XP_006577814.1| PREDICTED: uncharacterized protein LOC100786491 isoform X3 [Glycine
           max]
          Length = 266

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 38/43 (88%), Positives = 43/43 (100%)
 Frame = -3

Query: 314 DLFYKYGRVIDIELKIPPRPPCYCFVEFESARDAEDAIRGRDG 186
           DLFYKYGR++DIELK+PPRPPCYCFVEF++ARDAEDAIRGRDG
Sbjct: 25  DLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDG 67


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