BLASTX nr result
ID: Catharanthus23_contig00004612
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00004612
(417 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003588311.1| NADH-ubiquinone oxidoreductase chain [Medica... 119 5e-40
ref|XP_004149312.1| PREDICTED: (-)-germacrene D synthase-like [C... 167 2e-39
ref|XP_003588406.1| hypothetical protein MTR_1g006900 [Medicago ... 100 7e-31
ref|XP_003588331.1| NADH-ubiquinone oxidoreductase chain [Medica... 78 2e-28
gb|ESW21652.1| hypothetical protein PHAVU_005G088300g [Phaseolus... 78 6e-18
emb|CAA39309.1| unnamed protein product [Beta vulgaris subsp. vu... 78 1e-12
ref|YP_004927621.1| hypothetical protein AnruMp19 (mitochondrion... 69 8e-10
ref|YP_008992280.1| hypothetical protein Salmi_Mp014 (mitochondr... 61 1e-07
ref|YP_173423.1| hypothetical protein NitaMp081 [Nicotiana tabac... 61 1e-07
tpg|DAA42289.1| TPA: hypothetical protein ZEAMMB73_350644 [Zea m... 59 7e-07
gb|AGC78862.1| hypothetical protein (mitochondrion) [Vicia faba] 57 2e-06
ref|YP_007516903.1| hypothetical protein GlmaxMp54 (mitochondrio... 57 2e-06
>ref|XP_003588311.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
gi|355477359|gb|AES58562.1| NADH-ubiquinone
oxidoreductase chain [Medicago truncatula]
Length = 548
Score = 119 bits (299), Expect(2) = 5e-40
Identities = 53/56 (94%), Positives = 55/56 (98%)
Frame = +1
Query: 250 LVNKCKLCCPTVWSTDHTEGQALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER 417
++NKCKL CPTVWSTDHTEGQALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER
Sbjct: 415 VINKCKLRCPTVWSTDHTEGQALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER 470
Score = 70.5 bits (171), Expect(2) = 5e-40
Identities = 34/57 (59%), Positives = 39/57 (68%), Gaps = 12/57 (21%)
Frame = +3
Query: 63 IVRGHNSP------------NTILRGEQELGIGCGRNSRQWLRCSVDSLPLCGGPDP 197
I+R H++P ++ G ELGIGCGRNSRQWLRCSVDSLPLCGGPDP
Sbjct: 356 ILRCHDAPIPMAIPLILLALGSLFVGYLELGIGCGRNSRQWLRCSVDSLPLCGGPDP 412
>ref|XP_004149312.1| PREDICTED: (-)-germacrene D synthase-like [Cucumis sativus]
Length = 828
Score = 167 bits (422), Expect = 2e-39
Identities = 89/130 (68%), Positives = 96/130 (73%), Gaps = 1/130 (0%)
Frame = -2
Query: 416 LSGSGRLVHGPLDGRCKARNWNTLIPLVPVLRFRACPSVWSVLHTVGQQSLHLFTNYDGS 237
LSGSGRLVHGPLDGRCKARN NTLIPLVPVLRFRACPSVWSVLHTVGQ+SLHLFTNY+GS
Sbjct: 346 LSGSGRLVHGPLDGRCKARNLNTLIPLVPVLRFRACPSVWSVLHTVGQRSLHLFTNYEGS 405
Query: 236 PGPLSSSLFCSLVGVRTPTKGEGVD*TSQPLAGISPASDPQFLFTPED-RVG*IVTSYDR 60
PGPLSSSLFCSLVG P +G P P P D R+G IVTSYDR
Sbjct: 406 PGPLSSSLFCSLVGSGPPQRGRESTEHLSHWREFRPHPIPNSCSPPIDSRLGFIVTSYDR 465
Query: 59 VG*ATAASSQ 30
VG + ++Q
Sbjct: 466 VGSCRSNNNQ 475
>ref|XP_003588406.1| hypothetical protein MTR_1g006900 [Medicago truncatula]
gi|355477454|gb|AES58657.1| hypothetical protein
MTR_1g006900 [Medicago truncatula]
Length = 160
Score = 100 bits (248), Expect(2) = 7e-31
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 283 VWSTDHTEGQALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER 417
VWSTDHTEGQALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER
Sbjct: 38 VWSTDHTEGQALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER 82
Score = 59.7 bits (143), Expect(2) = 7e-31
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +2
Query: 125 MRAKFPPMAEMFSRLPPPLWGSGPLRVSRK 214
MRAKFPPMAEMFSRLPPPLWGSGPL +K
Sbjct: 1 MRAKFPPMAEMFSRLPPPLWGSGPLTSEQK 30
>ref|XP_003588331.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
gi|355477379|gb|AES58582.1| NADH-ubiquinone
oxidoreductase chain [Medicago truncatula]
Length = 569
Score = 77.8 bits (190), Expect(2) = 2e-28
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 310 QALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER 417
+ALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER
Sbjct: 456 RALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER 491
Score = 73.6 bits (179), Expect(2) = 2e-28
Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 12/67 (17%)
Frame = +3
Query: 63 IVRGHNSP------------NTILRGEQELGIGCGRNSRQWLRCSVDSLPLCGGPDPYE* 206
I+R H++P ++ G ELGIGCGRNSRQWLRCSVDSLPLCGGPDP
Sbjct: 377 ILRCHDAPIPMAIPLILLALGSLFVGYLELGIGCGRNSRQWLRCSVDSLPLCGGPDPLRV 436
Query: 207 AEKGGGK 227
+ KG K
Sbjct: 437 SRKGRRK 443
>gb|ESW21652.1| hypothetical protein PHAVU_005G088300g [Phaseolus vulgaris]
Length = 118
Score = 77.8 bits (190), Expect(2) = 6e-18
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 310 QALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER 417
+ALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER
Sbjct: 26 RALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPER 61
Score = 38.5 bits (88), Expect(2) = 6e-18
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +2
Query: 125 MRAKFPPMAEMFSRLPPPLWGSGPLRVSRK 214
MRAKFPPMAEMFSRL G PLR ++
Sbjct: 1 MRAKFPPMAEMFSRLLNLCGGPDPLRALKR 30
>emb|CAA39309.1| unnamed protein product [Beta vulgaris subsp. vulgaris]
Length = 90
Score = 77.8 bits (190), Expect = 1e-12
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +2
Query: 320 SEGRERAESMCSNFWPCTDHPMDHGLNGHCLR 415
SEGRERAESMCSNFWPCTDHPMDHGLNGHCL+
Sbjct: 1 SEGRERAESMCSNFWPCTDHPMDHGLNGHCLK 32
>ref|YP_004927621.1| hypothetical protein AnruMp19 (mitochondrion) [Anomodon rugelii]
gi|336089478|gb|AEH99668.1| hypothetical protein
AnruMp19 [Anomodon rugelii]
Length = 124
Score = 68.6 bits (166), Expect = 8e-10
Identities = 34/47 (72%), Positives = 36/47 (76%)
Frame = -2
Query: 344 IPLVPVLRFRACPSVWSVLHTVGQQSLHLFTNYDGSPGPLSSSLFCS 204
+P +P R PSVWSVL TVGQQSLHLFT Y GSP PLSSSLFCS
Sbjct: 36 VPFIPPFHSRIRPSVWSVLDTVGQQSLHLFT-YSGSPRPLSSSLFCS 81
>ref|YP_008992280.1| hypothetical protein Salmi_Mp014 (mitochondrion) [Salvia
miltiorrhiza] gi|534292256|gb|AGU16548.1| hypothetical
protein Salmi_Mp014 (mitochondrion) [Salvia
miltiorrhiza]
Length = 101
Score = 61.2 bits (147), Expect = 1e-07
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +2
Query: 347 MCSNFWPCTDHPMDHGLNGHCLR 415
MCSNFWPCTDHPMDHGLNGHCL+
Sbjct: 1 MCSNFWPCTDHPMDHGLNGHCLK 23
>ref|YP_173423.1| hypothetical protein NitaMp081 [Nicotiana tabacum]
gi|56806587|dbj|BAD83488.1| hypothetical protein
(mitochondrion) [Nicotiana tabacum]
Length = 116
Score = 61.2 bits (147), Expect = 1e-07
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +2
Query: 347 MCSNFWPCTDHPMDHGLNGHCLR 415
MCSNFWPCTDHPMDHGLNGHCL+
Sbjct: 1 MCSNFWPCTDHPMDHGLNGHCLK 23
>tpg|DAA42289.1| TPA: hypothetical protein ZEAMMB73_350644 [Zea mays]
Length = 56
Score = 58.9 bits (141), Expect = 7e-07
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +2
Query: 347 MCSNFWPCTDHPMDHGLNGHCLR 415
MCSNFWPCTDHP DHGLNGHCL+
Sbjct: 1 MCSNFWPCTDHPTDHGLNGHCLK 23
>gb|AGC78862.1| hypothetical protein (mitochondrion) [Vicia faba]
Length = 101
Score = 57.4 bits (137), Expect = 2e-06
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +2
Query: 347 MCSNFWPCTDHPMDHGLNGHCLR 415
MCSNFWPCTDH MDHGLNGHCL+
Sbjct: 1 MCSNFWPCTDHLMDHGLNGHCLK 23
>ref|YP_007516903.1| hypothetical protein GlmaxMp54 (mitochondrion) [Glycine max]
gi|403311613|gb|AFR34361.1| hypothetical protein
GlmaxMp54 (mitochondrion) [Glycine max]
Length = 101
Score = 57.4 bits (137), Expect = 2e-06
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +2
Query: 347 MCSNFWPCTDHPMDHGLNGHCLR 415
MCSNFWPCTDH MDHGLNGHCL+
Sbjct: 1 MCSNFWPCTDHLMDHGLNGHCLK 23