BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00004590
         (1273 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352669.1| PREDICTED: pentatricopeptide repeat-containi...   482   e-133
ref|XP_004242426.1| PREDICTED: pentatricopeptide repeat-containi...   478   e-132
ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containi...   452   e-124
ref|XP_006484804.1| PREDICTED: pentatricopeptide repeat-containi...   447   e-123
ref|XP_006437247.1| hypothetical protein CICLE_v10031787mg [Citr...   445   e-122
ref|XP_002301807.2| hypothetical protein POPTR_0002s24950g [Popu...   442   e-121
gb|EMJ01118.1| hypothetical protein PRUPE_ppa006910mg [Prunus pe...   441   e-121
gb|EOX93806.1| Tetratricopeptide repeat (TPR)-like superfamily p...   440   e-121
ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containi...   440   e-121
ref|XP_003546072.1| PREDICTED: pentatricopeptide repeat-containi...   439   e-120
ref|XP_002883590.1| hypothetical protein ARALYDRAFT_899142 [Arab...   435   e-119
ref|XP_006418648.1| hypothetical protein EUTSA_v10002564mg [Eutr...   434   e-119
ref|XP_006594515.1| PREDICTED: pentatricopeptide repeat-containi...   433   e-119
gb|ESW19937.1| hypothetical protein PHAVU_006G167600g [Phaseolus...   433   e-119
ref|XP_004485985.1| PREDICTED: pentatricopeptide repeat-containi...   432   e-118
ref|NP_189158.3| pentatricopeptide repeat-containing protein [Ar...   432   e-118
ref|XP_002534359.1| pentatricopeptide repeat-containing protein,...   431   e-118
ref|XP_004293124.1| PREDICTED: pentatricopeptide repeat-containi...   431   e-118
gb|EXB84488.1| hypothetical protein L484_015819 [Morus notabilis]     429   e-117
ref|XP_006297781.1| hypothetical protein CARUB_v10013818mg, part...   426   e-117

>ref|XP_006352669.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
            mitochondrial-like [Solanum tuberosum]
          Length = 379

 Score =  482 bits (1241), Expect = e-133
 Identities = 244/349 (69%), Positives = 282/349 (80%), Gaps = 5/349 (1%)
 Frame = -3

Query: 1034 MRITLRTSLFSILRASLYSSLRPISAAS--DSSSKTLIPKPPVA---PNSNPSPRTRTPL 870
            M+ T+R  + S L +SL  SLR IS +S  D   KTL    P +   P   P  RT+TPL
Sbjct: 1    MQATVRRPVISFLFSSL--SLRRISNSSSADHHPKTLTSPLPFSDELPVPIPRTRTQTPL 58

Query: 869  EKQFESWIQKLQPGFTPSDVAEALRAQSDPDLALDIFRWTAQQRGYKHNDVSYLTMIEIV 690
            EKQFESWI  L+PGFTP+DV EAL+AQ+DPDLALDIFRWT QQRGYKHN V+YL MI I 
Sbjct: 59   EKQFESWINNLKPGFTPADVNEALKAQTDPDLALDIFRWTGQQRGYKHNHVTYLNMINIA 118

Query: 689  VSGKRYRVAETLVEEVIAGACPASLPLYNSMIKFCCGRKFLFNRAFDIYKKMLKCEDSEV 510
            VS KRYRVAETLVEEV+AGACP SLPLYNSMIKFCCGRKFLFNRAFDIYKKM KCED+  
Sbjct: 119  VSSKRYRVAETLVEEVLAGACPPSLPLYNSMIKFCCGRKFLFNRAFDIYKKMTKCEDA-- 176

Query: 509  KPXXXXXXXXXXXXLRKFSRLNVSYVYLHAVRSLTRQMKAYGVIPDTFVLNMIIKAYSKC 330
            KP            L KF++L+V YVYLH+VRSL +QMK++GVIPDTF LNMIIKAYSKC
Sbjct: 177  KPSLETYNLLLNALLSKFNKLHVCYVYLHSVRSLAKQMKSFGVIPDTFALNMIIKAYSKC 236

Query: 329  LEVDEAVRVFHEMGLYGCEPNSYTYSYLVKGLCEKGRVNQGLEFFREMRQKGLVPKGGTY 150
            LEVDEA+RV+ EMGLYGCEP+++TY Y+ KGLCEKGRVNQGLEFF+EMR KG +PKG TY
Sbjct: 237  LEVDEAIRVYREMGLYGCEPDAFTYGYIAKGLCEKGRVNQGLEFFKEMRNKGFIPKGSTY 296

Query: 149  VVLVCSLALERKFEDAIEILYDMLRNSMSPDFLTYKTVLEELCRDGRGD 3
            ++LVCSLALER+FEDA E+++DML NS+SPD LTYKTV+EEL R+GRGD
Sbjct: 297  MILVCSLALERRFEDATEVVFDMLDNSLSPDQLTYKTVMEELSREGRGD 345


>ref|XP_004242426.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
            mitochondrial-like [Solanum lycopersicum]
          Length = 403

 Score =  478 bits (1231), Expect = e-132
 Identities = 240/349 (68%), Positives = 282/349 (80%), Gaps = 5/349 (1%)
 Frame = -3

Query: 1034 MRITLRTSLFSILRASLYSSLRPISAAS--DSSSKTLIPKPPVA---PNSNPSPRTRTPL 870
            M+ T+R  + S L +SL  SLR +S++S  D   KT     P +   P   P  RT+TPL
Sbjct: 25   MQATVRRPVISFLFSSL--SLRRVSSSSSADHHPKTAASPLPFSDELPVPIPRTRTQTPL 82

Query: 869  EKQFESWIQKLQPGFTPSDVAEALRAQSDPDLALDIFRWTAQQRGYKHNDVSYLTMIEIV 690
            EKQFESWI  L+PGFTP+DV E+LR+Q+DPDLALDIFRWT QQRGYKHN V+YL MI I 
Sbjct: 83   EKQFESWINNLKPGFTPADVNESLRSQTDPDLALDIFRWTGQQRGYKHNHVTYLNMINIA 142

Query: 689  VSGKRYRVAETLVEEVIAGACPASLPLYNSMIKFCCGRKFLFNRAFDIYKKMLKCEDSEV 510
            VS KRYRVAETLVEEV+AGACP SLPLYNSMIKFCCGRKFLFNRAFDIYKKM KCED+  
Sbjct: 143  VSSKRYRVAETLVEEVLAGACPPSLPLYNSMIKFCCGRKFLFNRAFDIYKKMTKCEDA-- 200

Query: 509  KPXXXXXXXXXXXXLRKFSRLNVSYVYLHAVRSLTRQMKAYGVIPDTFVLNMIIKAYSKC 330
            KP            L KF++L+V YVYLH+VRSL +QMK++GVIPDTF LNMIIKAYSKC
Sbjct: 201  KPSLETYNLLLNALLSKFNKLHVCYVYLHSVRSLAKQMKSFGVIPDTFALNMIIKAYSKC 260

Query: 329  LEVDEAVRVFHEMGLYGCEPNSYTYSYLVKGLCEKGRVNQGLEFFREMRQKGLVPKGGTY 150
            LEVDEA+RV+ EMGLYGCEP+++TY Y+ KGLCEKGRVNQGLEFF+EMR KG +PKG TY
Sbjct: 261  LEVDEAIRVYREMGLYGCEPDAFTYGYIAKGLCEKGRVNQGLEFFKEMRNKGFIPKGSTY 320

Query: 149  VVLVCSLALERKFEDAIEILYDMLRNSMSPDFLTYKTVLEELCRDGRGD 3
            ++LVCSLALER+FEDA E+++DML NS+SPD LTY+TV+EEL R+GRGD
Sbjct: 321  MILVCSLALERRFEDASEVVFDMLDNSLSPDQLTYRTVMEELSREGRGD 369


>ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  452 bits (1164), Expect = e-124
 Identities = 221/315 (70%), Positives = 258/315 (81%)
 Frame = -3

Query: 953 SDSSSKTLIPKPPVAPNSNPSPRTRTPLEKQFESWIQKLQPGFTPSDVAEALRAQSDPDL 774
           SD+  +TLIP P      +P+P+T TPL+ QFESWI  L+PGF+PSDV EALRAQSDPDL
Sbjct: 50  SDADPETLIPPP-----QSPNPKTPTPLQMQFESWIHMLKPGFSPSDVDEALRAQSDPDL 104

Query: 773 ALDIFRWTAQQRGYKHNDVSYLTMIEIVVSGKRYRVAETLVEEVIAGACPASLPLYNSMI 594
           ALDIFRWT QQRGY+HN V+YLTMI+I VSGKR+R AETL+EEVIAGAC  S+PLYNS+I
Sbjct: 105 ALDIFRWTGQQRGYRHNHVTYLTMIKIAVSGKRFRHAETLIEEVIAGACSVSVPLYNSII 164

Query: 593 KFCCGRKFLFNRAFDIYKKMLKCEDSEVKPXXXXXXXXXXXXLRKFSRLNVSYVYLHAVR 414
           +FCCGRKFLFNRAFD+YKKML  ED   KP            LRKF++L V YVYLHAVR
Sbjct: 165 RFCCGRKFLFNRAFDVYKKMLNSEDC--KPSLETYTLLLNALLRKFNKLTVCYVYLHAVR 222

Query: 413 SLTRQMKAYGVIPDTFVLNMIIKAYSKCLEVDEAVRVFHEMGLYGCEPNSYTYSYLVKGL 234
           SLT+QMK  GVIPDTF LNMIIKAYSKCLEVDEA+RVF EMGLYGCEPN+YTY Y+  GL
Sbjct: 223 SLTKQMKVSGVIPDTFALNMIIKAYSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIANGL 282

Query: 233 CEKGRVNQGLEFFREMRQKGLVPKGGTYVVLVCSLALERKFEDAIEILYDMLRNSMSPDF 54
           CEKGRV+QGL F+REMR K LVP   TYV+L+CSL++ER+FE+A +IL+DML NSM+PD 
Sbjct: 283 CEKGRVSQGLGFYREMRSKDLVPSSSTYVILICSLSMERRFEEATKILFDMLGNSMAPDL 342

Query: 53  LTYKTVLEELCRDGR 9
           LTYKT+LE L R+G+
Sbjct: 343 LTYKTLLEGLSREGK 357


>ref|XP_006484804.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
            mitochondrial-like [Citrus sinensis]
          Length = 388

 Score =  447 bits (1150), Expect = e-123
 Identities = 219/354 (61%), Positives = 271/354 (76%), Gaps = 12/354 (3%)
 Frame = -3

Query: 1034 MRITLRTSLFSILRASLYSSLRPISAA------SDSSSKTLIPKP------PVAPNSNPS 891
            M +T    L + L+ S + S+ P+++       S  S+   + +P      P  PN NP 
Sbjct: 1    MPVTFLRLLTTALKNSKFPSIAPLTSLHVPAIPSTPSAHPSLYQPHRLSSNPPTPNPNPQ 60

Query: 890  PRTRTPLEKQFESWIQKLQPGFTPSDVAEALRAQSDPDLALDIFRWTAQQRGYKHNDVSY 711
             RTRTPLEKQFE+WIQ L+PGFTPSDV  AL+AQSDPDLALDIFRWT+QQ GY+HN  SY
Sbjct: 61   TRTRTPLEKQFETWIQHLKPGFTPSDVVSALQAQSDPDLALDIFRWTSQQHGYRHNHESY 120

Query: 710  LTMIEIVVSGKRYRVAETLVEEVIAGACPASLPLYNSMIKFCCGRKFLFNRAFDIYKKML 531
              +I I+++G+RYR  ETL+EEV+AG C  S+PLYNS+IKFCCGRK LFNRAFD YKKML
Sbjct: 121  CAIIHILINGRRYRNVETLLEEVLAGNCEMSVPLYNSIIKFCCGRKLLFNRAFDAYKKML 180

Query: 530  KCEDSEVKPXXXXXXXXXXXXLRKFSRLNVSYVYLHAVRSLTRQMKAYGVIPDTFVLNMI 351
            K  +   KP            LR+F++LNV YVYLH+VRSLT+QMK+ GVIPDT+ LNMI
Sbjct: 181  KSHNC--KPTLETFTLLLNALLRRFNKLNVCYVYLHSVRSLTKQMKSLGVIPDTYALNMI 238

Query: 350  IKAYSKCLEVDEAVRVFHEMGLYGCEPNSYTYSYLVKGLCEKGRVNQGLEFFREMRQKGL 171
            IKAYSKCL+VDEA+RVF EMGLYGCEPN++TYSY+ +GLCEKGRV QG  F++EM++KGL
Sbjct: 239  IKAYSKCLQVDEAIRVFREMGLYGCEPNAFTYSYIARGLCEKGRVEQGFGFYKEMKEKGL 298

Query: 170  VPKGGTYVVLVCSLALERKFEDAIEILYDMLRNSMSPDFLTYKTVLEELCRDGR 9
            VP G  Y++L+CSLALER+FEDA+E+L+DML NSM PD LTYKT+LE LCR+GR
Sbjct: 299  VPSGSCYMILICSLALERRFEDALEVLFDMLGNSMGPDMLTYKTLLEGLCREGR 352


>ref|XP_006437247.1| hypothetical protein CICLE_v10031787mg [Citrus clementina]
            gi|557539443|gb|ESR50487.1| hypothetical protein
            CICLE_v10031787mg [Citrus clementina]
          Length = 388

 Score =  445 bits (1144), Expect = e-122
 Identities = 218/354 (61%), Positives = 270/354 (76%), Gaps = 12/354 (3%)
 Frame = -3

Query: 1034 MRITLRTSLFSILRASLYSSLRPISAA------SDSSSKTLIPKP------PVAPNSNPS 891
            M +T    L + L+ S + S+ P+++       S  S+   + +P      P  PN NP 
Sbjct: 1    MPVTFLRLLTTALKNSKFPSISPLTSLHVPAIPSTPSAHPSLYQPHRLSSNPPTPNPNPQ 60

Query: 890  PRTRTPLEKQFESWIQKLQPGFTPSDVAEALRAQSDPDLALDIFRWTAQQRGYKHNDVSY 711
             RTRTPLEKQFE+WIQ L+PGFTPSDV  AL+AQSDPDLALDIFRWT+QQ GY+HN  SY
Sbjct: 61   TRTRTPLEKQFETWIQHLKPGFTPSDVVSALQAQSDPDLALDIFRWTSQQHGYRHNHESY 120

Query: 710  LTMIEIVVSGKRYRVAETLVEEVIAGACPASLPLYNSMIKFCCGRKFLFNRAFDIYKKML 531
              +I I+++G+RYR  ETL+EEV+AG C  S+PLYNS+IKFCCGRK LFNRAFD YKKML
Sbjct: 121  CAIIHILINGRRYRNVETLLEEVLAGNCEMSVPLYNSIIKFCCGRKLLFNRAFDAYKKML 180

Query: 530  KCEDSEVKPXXXXXXXXXXXXLRKFSRLNVSYVYLHAVRSLTRQMKAYGVIPDTFVLNMI 351
            K  +   KP            LR+F++LNV YVYLH+VRSLT+QMK+ GVIPDT+ LNMI
Sbjct: 181  KSHNC--KPTLETFTLLLNALLRRFNKLNVCYVYLHSVRSLTKQMKSLGVIPDTYALNMI 238

Query: 350  IKAYSKCLEVDEAVRVFHEMGLYGCEPNSYTYSYLVKGLCEKGRVNQGLEFFREMRQKGL 171
            IKAYSKCL+VDEA+RVF EMGLYGCEPN++TYSY+ +GLCEKGRV QG  F++EM++KGL
Sbjct: 239  IKAYSKCLQVDEAIRVFREMGLYGCEPNAFTYSYIARGLCEKGRVEQGFGFYKEMKEKGL 298

Query: 170  VPKGGTYVVLVCSLALERKFEDAIEILYDMLRNSMSPDFLTYKTVLEELCRDGR 9
            VP G  Y++L+CSLALE +FEDA+E+L+DML NSM PD LTYKT+LE LCR+GR
Sbjct: 299  VPSGSCYMILICSLALESRFEDALEVLFDMLGNSMGPDMLTYKTLLEGLCREGR 352


>ref|XP_002301807.2| hypothetical protein POPTR_0002s24950g [Populus trichocarpa]
            gi|550345772|gb|EEE81080.2| hypothetical protein
            POPTR_0002s24950g [Populus trichocarpa]
          Length = 387

 Score =  442 bits (1136), Expect = e-121
 Identities = 223/337 (66%), Positives = 262/337 (77%)
 Frame = -3

Query: 1013 SLFSILRASLYSSLRPISAASDSSSKTLIPKPPVAPNSNPSPRTRTPLEKQFESWIQKLQ 834
            S   I   SLY   RP S    S +      P +     P   TRTPLE QFE+W Q L+
Sbjct: 28   STLQITDPSLYHRHRPFSENPQSQT------PEIPFLKTP---TRTPLETQFETWTQNLK 78

Query: 833  PGFTPSDVAEALRAQSDPDLALDIFRWTAQQRGYKHNDVSYLTMIEIVVSGKRYRVAETL 654
            PGFTP+DV  A+RAQSDPDLALDIFRWTAQQR YKHN ++YLT+I+I++SG+RYR AETL
Sbjct: 79   PGFTPTDVDTAIRAQSDPDLALDIFRWTAQQRNYKHNHITYLTVIKILISGRRYRQAETL 138

Query: 653  VEEVIAGACPASLPLYNSMIKFCCGRKFLFNRAFDIYKKMLKCEDSEVKPXXXXXXXXXX 474
            +EEVIAGAC  S+PLYNSMI+FCCGRK LFNRAFDIYKKMLK ED   KP          
Sbjct: 139  IEEVIAGACEISVPLYNSMIRFCCGRKLLFNRAFDIYKKMLKSEDC--KPTLDTYTLLFN 196

Query: 473  XXLRKFSRLNVSYVYLHAVRSLTRQMKAYGVIPDTFVLNMIIKAYSKCLEVDEAVRVFHE 294
              LR+F++LNV YVYLHAV+SLT+QMKA GVIPDTFVLNMIIKAY+KCLEVDEAVRVF E
Sbjct: 197  SLLRRFNKLNVCYVYLHAVKSLTKQMKASGVIPDTFVLNMIIKAYAKCLEVDEAVRVFRE 256

Query: 293  MGLYGCEPNSYTYSYLVKGLCEKGRVNQGLEFFREMRQKGLVPKGGTYVVLVCSLALERK 114
            MGLYGCE N+Y+YSYLVKGLC KGR  QGL F++EM+ KGLVP G TY++L+CSL +ER+
Sbjct: 257  MGLYGCEANAYSYSYLVKGLCGKGRSGQGLGFYKEMKGKGLVPSGSTYMILICSLGMERR 316

Query: 113  FEDAIEILYDMLRNSMSPDFLTYKTVLEELCRDGRGD 3
            FE+AI +++DML +SMSPD LTY+TVLE LCR+G  D
Sbjct: 317  FEEAIGVVFDMLGDSMSPDLLTYRTVLEGLCREGMVD 353


>gb|EMJ01118.1| hypothetical protein PRUPE_ppa006910mg [Prunus persica]
          Length = 390

 Score =  441 bits (1133), Expect = e-121
 Identities = 223/362 (61%), Positives = 274/362 (75%), Gaps = 19/362 (5%)
 Frame = -3

Query: 1034 MRITLRTSLFSILRA-SLYSSLRPISAASDSSSKTLIPKPPV--------------APNS 900
            M +T+R  L + LR  ++ S  RP       SS+ ++P+P                +   
Sbjct: 1    MPVTIRRLLTATLRTPNILSHSRPAL-----SSRHVVPQPSFPLTHPSLYHRFLSSSSTE 55

Query: 899  NPSP----RTRTPLEKQFESWIQKLQPGFTPSDVAEALRAQSDPDLALDIFRWTAQQRGY 732
            NP+P    RTRTPLEKQFE+W+ KL+PGF P +V EAL+AQSDPDLALDIFRWTAQQR Y
Sbjct: 56   NPNPPNPLRTRTPLEKQFETWVHKLKPGFGPLEVKEALQAQSDPDLALDIFRWTAQQRNY 115

Query: 731  KHNDVSYLTMIEIVVSGKRYRVAETLVEEVIAGACPASLPLYNSMIKFCCGRKFLFNRAF 552
            KHN  +YLTM++I++ GKR+R AETLVEEVIAGAC  S+PLYNSMI+FCCGRK LFNRAF
Sbjct: 116  KHNQATYLTMVKILIDGKRFRQAETLVEEVIAGACEISVPLYNSMIRFCCGRKMLFNRAF 175

Query: 551  DIYKKMLKCEDSEVKPXXXXXXXXXXXXLRKFSRLNVSYVYLHAVRSLTRQMKAYGVIPD 372
            DIYKKML  ED   KP            LR+F+ ++V +VYL AVRSL++QMKA GVIPD
Sbjct: 176  DIYKKMLNSEDC--KPNLETYALLLNSLLRRFNNMHVCFVYLRAVRSLSKQMKACGVIPD 233

Query: 371  TFVLNMIIKAYSKCLEVDEAVRVFHEMGLYGCEPNSYTYSYLVKGLCEKGRVNQGLEFFR 192
            TFVLNMIIKAYSKCLEV++A++VF EMGLYGCEPN+YTY Y+ KGLCEKGRV QGL F++
Sbjct: 234  TFVLNMIIKAYSKCLEVEDAMQVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLGFYK 293

Query: 191  EMRQKGLVPKGGTYVVLVCSLALERKFEDAIEILYDMLRNSMSPDFLTYKTVLEELCRDG 12
            EMR KGLVP   TY++++CSLA+ER+++DA E++ DML NSMSPD LTYKT+LE LCRDG
Sbjct: 294  EMRGKGLVPTSSTYMIVICSLAMERRYDDASEVVLDMLSNSMSPDLLTYKTLLEGLCRDG 353

Query: 11   RG 6
            +G
Sbjct: 354  KG 355


>gb|EOX93806.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 382

 Score =  440 bits (1131), Expect = e-121
 Identities = 212/305 (69%), Positives = 251/305 (82%), Gaps = 1/305 (0%)
 Frame = -3

Query: 920 PPVAPNSN-PSPRTRTPLEKQFESWIQKLQPGFTPSDVAEALRAQSDPDLALDIFRWTAQ 744
           PP +P S    PRTRTPLE QFE+WIQKL+PGFT +DV  ALRAQ D DLALDIFRWTA 
Sbjct: 46  PPQSPASPFLRPRTRTPLETQFETWIQKLKPGFTTADVDAALRAQPDADLALDIFRWTAL 105

Query: 743 QRGYKHNDVSYLTMIEIVVSGKRYRVAETLVEEVIAGACPASLPLYNSMIKFCCGRKFLF 564
           QRGYKH D +YLT+I++++S KRYR AETL+EEVIAGACP S+PLYN++I+FCCGRKFLF
Sbjct: 106 QRGYKHTDATYLTIIKLLISAKRYRHAETLIEEVIAGACPISVPLYNTIIRFCCGRKFLF 165

Query: 563 NRAFDIYKKMLKCEDSEVKPXXXXXXXXXXXXLRKFSRLNVSYVYLHAVRSLTRQMKAYG 384
           NRAFD+YKKMLK +D   KP            LR+F+R NV +VYLHAVRSLT+QMKA G
Sbjct: 166 NRAFDVYKKMLKSDDC--KPTLETFTLLFNSLLRRFNRQNVCHVYLHAVRSLTKQMKALG 223

Query: 383 VIPDTFVLNMIIKAYSKCLEVDEAVRVFHEMGLYGCEPNSYTYSYLVKGLCEKGRVNQGL 204
           +IPDTFVLNMIIKAYSKCL +DEA+RVF EMGLYGCEPN+YTY Y+ KGLCEKGRV QG 
Sbjct: 224 IIPDTFVLNMIIKAYSKCLAIDEAIRVFREMGLYGCEPNAYTYGYIFKGLCEKGRVAQGF 283

Query: 203 EFFREMRQKGLVPKGGTYVVLVCSLALERKFEDAIEILYDMLRNSMSPDFLTYKTVLEEL 24
             F+EMR KGLVPKG  Y++L+CSLA+E++ +DA++++ DML NSM+PD LTYKTVLEE 
Sbjct: 284 GLFKEMRDKGLVPKGSAYMILICSLAMEQRLDDAVDVVSDMLANSMAPDLLTYKTVLEEF 343

Query: 23  CRDGR 9
           CR GR
Sbjct: 344 CRRGR 348


>ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
            mitochondrial-like [Cucumis sativus]
            gi|449516331|ref|XP_004165200.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g25210,
            mitochondrial-like [Cucumis sativus]
          Length = 393

 Score =  440 bits (1131), Expect = e-121
 Identities = 218/335 (65%), Positives = 266/335 (79%), Gaps = 3/335 (0%)
 Frame = -3

Query: 1004 SILRASLYSSLRPISAASDSSSKTLIPKPPVAPNSN---PSPRTRTPLEKQFESWIQKLQ 834
            S+L   L S L      S S   + +  P  + N N   P  RT+TPLEKQFESW+QKL+
Sbjct: 25   SLLNPILPSHLHHRFLCSLSPPSSALLPPQNSDNLNLPIPKVRTQTPLEKQFESWVQKLK 84

Query: 833  PGFTPSDVAEALRAQSDPDLALDIFRWTAQQRGYKHNDVSYLTMIEIVVSGKRYRVAETL 654
            PGF+PSDV EAL+AQSDPDLALD+FRWTAQQRGYKHN ++YLT+I+I++  +R  +AETL
Sbjct: 85   PGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHNHLTYLTIIKILIYRRRCHLAETL 144

Query: 653  VEEVIAGACPASLPLYNSMIKFCCGRKFLFNRAFDIYKKMLKCEDSEVKPXXXXXXXXXX 474
            VEEVIAGAC  S+PLYNS+I+FCC RK  FNRAFD+YKKM K +D   KP          
Sbjct: 145  VEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDVYKKMWKSDDC--KPTLETYAMLFN 202

Query: 473  XXLRKFSRLNVSYVYLHAVRSLTRQMKAYGVIPDTFVLNMIIKAYSKCLEVDEAVRVFHE 294
              LR+F++L+VSYVYLH+VRSLT+QMK+ GVIPDTFVLNMIIKAYSKCLEVDEA+RVF E
Sbjct: 203  SLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYSKCLEVDEAIRVFRE 262

Query: 293  MGLYGCEPNSYTYSYLVKGLCEKGRVNQGLEFFREMRQKGLVPKGGTYVVLVCSLALERK 114
            MGLY C+PNSYTY Y+ KGLCEKGRV QGLEF++EMR +GL+P   TY++L+CSLA+ER+
Sbjct: 263  MGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRVRGLIPSSSTYMILICSLAMERR 322

Query: 113  FEDAIEILYDMLRNSMSPDFLTYKTVLEELCRDGR 9
            FE+AIEI +DML NSM+PD LTY+T+LE LCR+GR
Sbjct: 323  FEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGR 357


>ref|XP_003546072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
            mitochondrial-like [Glycine max]
          Length = 372

 Score =  439 bits (1129), Expect = e-120
 Identities = 223/337 (66%), Positives = 266/337 (78%), Gaps = 1/337 (0%)
 Frame = -3

Query: 1010 LFSILRASLYSSLRPISAASDSSSKTLIPKPPVAPNSNPSPRTRTPLEKQFESWIQKLQP 831
            LFS+   S YS L P +    S   T +       +++PS   RTP EKQFE+W+Q L+P
Sbjct: 8    LFSLRSVSTYS-LTPFTRPQPSLPLTRLLLHARPSSTSPS---RTPSEKQFETWVQALKP 63

Query: 830  GFTPSDVAEALRAQSDPDLALDIFRWTAQQRGYKHNDVSYLTMIEIVVSGKRYRVAETLV 651
            GFTPSDVA+AL+AQSDPDLALDIFRWTAQQR YKH   +YL +I+ +++G+RY  AETL+
Sbjct: 64   GFTPSDVAQALQAQSDPDLALDIFRWTAQQRNYKHTHHTYLIIIKHLIAGRRYHHAETLI 123

Query: 650  EEVIAGACP-ASLPLYNSMIKFCCGRKFLFNRAFDIYKKMLKCEDSEVKPXXXXXXXXXX 474
            EEVIAGAC  AS+PLYNS+I+FCCGRKFLFNRAFD+YKKML   D   KP          
Sbjct: 124  EEVIAGACDDASIPLYNSIIRFCCGRKFLFNRAFDVYKKMLNSRDC--KPNLETYSLLFN 181

Query: 473  XXLRKFSRLNVSYVYLHAVRSLTRQMKAYGVIPDTFVLNMIIKAYSKCLEVDEAVRVFHE 294
              LR+F++LNV YVYLHAVRSLT+QMKA GVIPD+FVLNMIIKAY+KCLEVDEA+RVF E
Sbjct: 182  SLLRRFNKLNVCYVYLHAVRSLTKQMKASGVIPDSFVLNMIIKAYAKCLEVDEAIRVFRE 241

Query: 293  MGLYGCEPNSYTYSYLVKGLCEKGRVNQGLEFFREMRQKGLVPKGGTYVVLVCSLALERK 114
            MGLYGCEPN+Y+Y Y+ KGLCEKGRV+QGL F+REMR KGLVP   T+V++VCSLA+ER+
Sbjct: 242  MGLYGCEPNAYSYGYIAKGLCEKGRVDQGLRFYREMRGKGLVPSTSTFVIIVCSLAMERR 301

Query: 113  FEDAIEILYDMLRNSMSPDFLTYKTVLEELCRDGRGD 3
            FEDAIE+L+DML  S SPD LTYKTVLE LCR+GR D
Sbjct: 302  FEDAIEVLFDMLGQSRSPDHLTYKTVLEGLCREGRVD 338


>ref|XP_002883590.1| hypothetical protein ARALYDRAFT_899142 [Arabidopsis lyrata subsp.
            lyrata] gi|297329430|gb|EFH59849.1| hypothetical protein
            ARALYDRAFT_899142 [Arabidopsis lyrata subsp. lyrata]
          Length = 379

 Score =  435 bits (1118), Expect = e-119
 Identities = 216/340 (63%), Positives = 263/340 (77%), Gaps = 2/340 (0%)
 Frame = -3

Query: 1019 RTSLFSILRASLYSSLRPISAASD--SSSKTLIPKPPVAPNSNPSPRTRTPLEKQFESWI 846
            R  L S    S+ SS   +S+  +  S S + +   P +  S P  RTRTPLE QFE+WI
Sbjct: 7    RLILLSSANRSINSSPSYLSSTVNHLSLSFSSVSSSPESHTSPPRIRTRTPLETQFETWI 66

Query: 845  QKLQPGFTPSDVAEALRAQSDPDLALDIFRWTAQQRGYKHNDVSYLTMIEIVVSGKRYRV 666
            Q L+PGFT SDV  ALRAQSDPDLALDIFRWT+QQRGYKHN  +Y TMI+  ++GKR + 
Sbjct: 67   QNLKPGFTNSDVVTALRAQSDPDLALDIFRWTSQQRGYKHNHEAYHTMIKQAITGKRNKF 126

Query: 665  AETLVEEVIAGACPASLPLYNSMIKFCCGRKFLFNRAFDIYKKMLKCEDSEVKPXXXXXX 486
             ETL+EEVIAGAC  S+PLYN +I+FCCGRKFLFNRAFD+Y KML+ EDS  KP      
Sbjct: 127  VETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSEDS--KPDLETYT 184

Query: 485  XXXXXXLRKFSRLNVSYVYLHAVRSLTRQMKAYGVIPDTFVLNMIIKAYSKCLEVDEAVR 306
                  L++F++LNV YVYLHAVRSLT+QMK+ GVIPDTFVLNMIIKAY+KCLEVDEA+R
Sbjct: 185  LLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSSGVIPDTFVLNMIIKAYAKCLEVDEAIR 244

Query: 305  VFHEMGLYGCEPNSYTYSYLVKGLCEKGRVNQGLEFFREMRQKGLVPKGGTYVVLVCSLA 126
            V+ EM LYG EPN+YTYSYL+KG+CEKGR+ QGL F++EMR KG+VP G  Y+VL+CSL+
Sbjct: 245  VYKEMALYGSEPNAYTYSYLIKGVCEKGRLGQGLGFYKEMRSKGMVPNGSCYMVLICSLS 304

Query: 125  LERKFEDAIEILYDMLRNSMSPDFLTYKTVLEELCRDGRG 6
            +ER+  +A+E++YDML NS+SPD LTY TVL ELCR GRG
Sbjct: 305  MERRLNEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRG 344


>ref|XP_006418648.1| hypothetical protein EUTSA_v10002564mg [Eutrema salsugineum]
           gi|557096576|gb|ESQ37084.1| hypothetical protein
           EUTSA_v10002564mg [Eutrema salsugineum]
          Length = 384

 Score =  434 bits (1115), Expect = e-119
 Identities = 210/318 (66%), Positives = 254/318 (79%), Gaps = 1/318 (0%)
 Frame = -3

Query: 953 SDSSSKTLIPKPPVAPNSNPSP-RTRTPLEKQFESWIQKLQPGFTPSDVAEALRAQSDPD 777
           S SS  +  P  P  P ++PS  RTRTPLE QFE+WIQ L+PGFT SDV  ALRAQSDPD
Sbjct: 35  SFSSVSSSSPSIPPEPQTSPSRIRTRTPLETQFETWIQNLKPGFTHSDVVAALRAQSDPD 94

Query: 776 LALDIFRWTAQQRGYKHNDVSYLTMIEIVVSGKRYRVAETLVEEVIAGACPASLPLYNSM 597
           LALDIFRWTAQQRGYKHN  +Y  MI+  ++GKR +  ETL++EV+AGAC  S+PLYNS+
Sbjct: 95  LALDIFRWTAQQRGYKHNHEAYHAMIKQAIAGKRNKFVETLIDEVVAGACDMSVPLYNSI 154

Query: 596 IKFCCGRKFLFNRAFDIYKKMLKCEDSEVKPXXXXXXXXXXXXLRKFSRLNVSYVYLHAV 417
           ++FCCGRKFLFNRAFD+Y KML+ + S  KP            L++F++LNV YVYLHAV
Sbjct: 155 VRFCCGRKFLFNRAFDVYNKMLRSDSS--KPDLETYTMLLSSLLKRFNKLNVCYVYLHAV 212

Query: 416 RSLTRQMKAYGVIPDTFVLNMIIKAYSKCLEVDEAVRVFHEMGLYGCEPNSYTYSYLVKG 237
           RSLT+QMK+ GVIPDTFVLNMIIKAY+KCLEVDEA+RVF EM LYG EPN+YTY YL KG
Sbjct: 213 RSLTKQMKSSGVIPDTFVLNMIIKAYAKCLEVDEAIRVFREMALYGSEPNAYTYGYLTKG 272

Query: 236 LCEKGRVNQGLEFFREMRQKGLVPKGGTYVVLVCSLALERKFEDAIEILYDMLRNSMSPD 57
           LCEKGRV QGL F++EMR KG+VP G  Y+VL+CSLA+ER+  +A+E++Y+ML NS+SPD
Sbjct: 273 LCEKGRVEQGLGFYKEMRSKGMVPSGSCYMVLICSLAMERRLSEAVEVVYEMLANSLSPD 332

Query: 56  FLTYKTVLEELCRDGRGD 3
            LTY TVL ELCR+GRG+
Sbjct: 333 MLTYNTVLAELCREGRGN 350


>ref|XP_006594515.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
            mitochondrial-like [Glycine max]
          Length = 375

 Score =  433 bits (1113), Expect = e-119
 Identities = 219/342 (64%), Positives = 265/342 (77%), Gaps = 1/342 (0%)
 Frame = -3

Query: 1025 TLRTSLFSILRASLYSSLRPISAASDSSSKTLIPKPPVAPNSNPSPRTRTPLEKQFESWI 846
            T+    F+I   S YS L P +    S   T        P+S+ +  +RTP EKQFE+W+
Sbjct: 3    TILRRFFTIRSVSAYS-LTPFTRPQPSLPLTRPLLLHARPSSSSTSPSRTPSEKQFETWV 61

Query: 845  QKLQPGFTPSDVAEALRAQSDPDLALDIFRWTAQQRGYKHNDVSYLTMIEIVVSGKRYRV 666
            Q L+PGFTPSDVA+AL+AQSDPDLALDIFRWTAQQR YKH   +YL +I+ +++G+RY  
Sbjct: 62   QALKPGFTPSDVAQALQAQSDPDLALDIFRWTAQQRNYKHTHHTYLIVIKHLIAGRRYHH 121

Query: 665  AETLVEEVIAGACP-ASLPLYNSMIKFCCGRKFLFNRAFDIYKKMLKCEDSEVKPXXXXX 489
            AETL+EEVIAGA   AS+PLYNS+I+FCCGRKFLFNRAFD+YKKML   D   KP     
Sbjct: 122  AETLIEEVIAGAIDDASIPLYNSIIRFCCGRKFLFNRAFDVYKKMLNSNDC--KPNLETY 179

Query: 488  XXXXXXXLRKFSRLNVSYVYLHAVRSLTRQMKAYGVIPDTFVLNMIIKAYSKCLEVDEAV 309
                   LR+F++LNV YVYLHAVRSLT+QMKA GVIPDTFV+NMIIKAY+KCLEVDEA+
Sbjct: 180  SLLFNSLLRRFNKLNVCYVYLHAVRSLTKQMKASGVIPDTFVVNMIIKAYAKCLEVDEAI 239

Query: 308  RVFHEMGLYGCEPNSYTYSYLVKGLCEKGRVNQGLEFFREMRQKGLVPKGGTYVVLVCSL 129
            RVF EMGLYGCEPN+Y++ Y+ KGLCEKGRV+QGL F+REMR+KG VP   T+V++VCSL
Sbjct: 240  RVFREMGLYGCEPNAYSFGYIAKGLCEKGRVDQGLGFYREMREKGFVPSTSTFVIIVCSL 299

Query: 128  ALERKFEDAIEILYDMLRNSMSPDFLTYKTVLEELCRDGRGD 3
            A+ER+ EDAIE+L+DML  S SPD LTYKTVLE LCR+GR D
Sbjct: 300  AMERRLEDAIELLFDMLGQSRSPDHLTYKTVLEGLCREGRVD 341


>gb|ESW19937.1| hypothetical protein PHAVU_006G167600g [Phaseolus vulgaris]
          Length = 373

 Score =  433 bits (1113), Expect = e-119
 Identities = 221/347 (63%), Positives = 267/347 (76%), Gaps = 3/347 (0%)
 Frame = -3

Query: 1034 MRITLRTSLFSILRASLYSSLRPISAASDSSSKTLIPKPPVAPNSNPSPR--TRTPLEKQ 861
            M I +   LF++   + YS L P +       +T +P   +  ++ PS    +RTP EKQ
Sbjct: 1    MAIIIPKRLFTLRSVTAYS-LNPFTRP-----RTSLPLTRLLLHARPSSTQPSRTPSEKQ 54

Query: 860  FESWIQKLQPGFTPSDVAEALRAQSDPDLALDIFRWTAQQRGYKHNDVSYLTMIEIVVSG 681
            FE+W+Q L+PGFTPSDVA+AL+AQSDPDLALDIFRWTAQQR YKH   +Y  MI+ ++SG
Sbjct: 55   FETWVQALKPGFTPSDVAQALQAQSDPDLALDIFRWTAQQRNYKHTSHTYFLMIKHLISG 114

Query: 680  KRYRVAETLVEEVIAGAC-PASLPLYNSMIKFCCGRKFLFNRAFDIYKKMLKCEDSEVKP 504
            +RY  AETL+EEVIAGAC   S+PLYNS+I+FCCGRKFLFNRAFD+YKKML   D   KP
Sbjct: 115  RRYNHAETLIEEVIAGACHDVSVPLYNSIIRFCCGRKFLFNRAFDVYKKMLNSNDC--KP 172

Query: 503  XXXXXXXXXXXXLRKFSRLNVSYVYLHAVRSLTRQMKAYGVIPDTFVLNMIIKAYSKCLE 324
                        LR+F++L+V YVYLHAVRSLT+QMKA GVIPDTFVLNMIIKAYS CLE
Sbjct: 173  DLETYTLLFNSLLRRFNKLHVCYVYLHAVRSLTKQMKASGVIPDTFVLNMIIKAYSMCLE 232

Query: 323  VDEAVRVFHEMGLYGCEPNSYTYSYLVKGLCEKGRVNQGLEFFREMRQKGLVPKGGTYVV 144
            VDEA+RVF EMGLYGCEPN+Y+Y Y+ KGLCEKGRV+QGL F+REMR  GLVP   TYV+
Sbjct: 233  VDEAIRVFREMGLYGCEPNAYSYGYIAKGLCEKGRVSQGLGFYREMRGNGLVPSTSTYVI 292

Query: 143  LVCSLALERKFEDAIEILYDMLRNSMSPDFLTYKTVLEELCRDGRGD 3
            +VCSLA+ER+FE+AIE+++DML  S SPD LTYKTVLE LCR+GR D
Sbjct: 293  IVCSLAMERRFEEAIEVVFDMLGQSRSPDHLTYKTVLEGLCREGRVD 339


>ref|XP_004485985.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
            mitochondrial-like [Cicer arietinum]
          Length = 369

 Score =  432 bits (1111), Expect = e-118
 Identities = 220/342 (64%), Positives = 267/342 (78%)
 Frame = -3

Query: 1028 ITLRTSLFSILRASLYSSLRPISAASDSSSKTLIPKPPVAPNSNPSPRTRTPLEKQFESW 849
            I  R  LF++   SLY S    S+   SS  T+      + +S+PS   +TPLEKQFE+W
Sbjct: 5    IITRKRLFNL--RSLYYS----SSLFYSSHSTIPSSTSTSSSSSPS---KTPLEKQFETW 55

Query: 848  IQKLQPGFTPSDVAEALRAQSDPDLALDIFRWTAQQRGYKHNDVSYLTMIEIVVSGKRYR 669
            I  L+PGFTPSDV  AL+AQSDPDLALDIFRWTAQQR YKH  ++YLT+I+ +++ + Y 
Sbjct: 56   INHLKPGFTPSDVNRALKAQSDPDLALDIFRWTAQQRSYKHTPLTYLTIIKQLITNRHYH 115

Query: 668  VAETLVEEVIAGACPASLPLYNSMIKFCCGRKFLFNRAFDIYKKMLKCEDSEVKPXXXXX 489
             AETLVEEVIAGAC  +LPLYNS+I+FCC RKFLFNR+FD+Y KML  +D   KP     
Sbjct: 116  QAETLVEEVIAGACDPTLPLYNSIIRFCCNRKFLFNRSFDVYNKMLISQDC--KPNLETY 173

Query: 488  XXXXXXXLRKFSRLNVSYVYLHAVRSLTRQMKAYGVIPDTFVLNMIIKAYSKCLEVDEAV 309
                   LR+F++L V Y+YLH+VRSLT+QMKA GVIPDTFVLNMIIKAYSKCLE+DEA+
Sbjct: 174  TLLFNSLLRRFNKLPVCYIYLHSVRSLTKQMKASGVIPDTFVLNMIIKAYSKCLELDEAI 233

Query: 308  RVFHEMGLYGCEPNSYTYSYLVKGLCEKGRVNQGLEFFREMRQKGLVPKGGTYVVLVCSL 129
            RVF+EMGLYGCEPN+YT+SY+ KGLCEKGRVNQGL F++EMR K +VP   TYV++VCSL
Sbjct: 234  RVFNEMGLYGCEPNAYTFSYIAKGLCEKGRVNQGLGFYKEMRVKCMVPSTSTYVIIVCSL 293

Query: 128  ALERKFEDAIEILYDMLRNSMSPDFLTYKTVLEELCRDGRGD 3
            ALER+FEDAIE+++DML NS SPD LTYKTVLE LCR+GR D
Sbjct: 294  ALERRFEDAIEVMFDMLDNSRSPDHLTYKTVLEGLCREGRVD 335


>ref|NP_189158.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273968|sp|Q9LSF5.1|PP254_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g25210, mitochondrial; Flags: Precursor
           gi|9294178|dbj|BAB02080.1| unnamed protein product
           [Arabidopsis thaliana] gi|332643472|gb|AEE76993.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 379

 Score =  432 bits (1110), Expect = e-118
 Identities = 210/305 (68%), Positives = 250/305 (81%), Gaps = 3/305 (0%)
 Frame = -3

Query: 911 APNSNPSP---RTRTPLEKQFESWIQKLQPGFTPSDVAEALRAQSDPDLALDIFRWTAQQ 741
           +P S+ SP   RTRTPLE QFE+WIQ L+PGFT SDV  ALRAQSDPDLALDIFRWTAQQ
Sbjct: 42  SPESHTSPSRIRTRTPLETQFETWIQNLKPGFTNSDVVIALRAQSDPDLALDIFRWTAQQ 101

Query: 740 RGYKHNDVSYLTMIEIVVSGKRYRVAETLVEEVIAGACPASLPLYNSMIKFCCGRKFLFN 561
           RGYKHN  +Y TMI+  ++GKR    ETL+EEVIAGAC  S+PLYN +I+FCCGRKFLFN
Sbjct: 102 RGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFN 161

Query: 560 RAFDIYKKMLKCEDSEVKPXXXXXXXXXXXXLRKFSRLNVSYVYLHAVRSLTRQMKAYGV 381
           RAFD+Y KML+ +DS  KP            L++F++LNV YVYLHAVRSLT+QMK+ GV
Sbjct: 162 RAFDVYNKMLRSDDS--KPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGV 219

Query: 380 IPDTFVLNMIIKAYSKCLEVDEAVRVFHEMGLYGCEPNSYTYSYLVKGLCEKGRVNQGLE 201
           IPDTFVLNMIIKAY+KCLEVDEA+RVF EM LYG EPN+YTYSYLVKG+CEKGRV QGL 
Sbjct: 220 IPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLG 279

Query: 200 FFREMRQKGLVPKGGTYVVLVCSLALERKFEDAIEILYDMLRNSMSPDFLTYKTVLEELC 21
           F++EM+ KG+VP G  Y+VL+CSL++ER+ ++A+E++YDML NS+SPD LTY TVL ELC
Sbjct: 280 FYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELC 339

Query: 20  RDGRG 6
           R GRG
Sbjct: 340 RGGRG 344


>ref|XP_002534359.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525434|gb|EEF28024.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 382

 Score =  431 bits (1108), Expect = e-118
 Identities = 208/320 (65%), Positives = 255/320 (79%)
 Frame = -3

Query: 962 SAASDSSSKTLIPKPPVAPNSNPSPRTRTPLEKQFESWIQKLQPGFTPSDVAEALRAQSD 783
           S  S  +  T +P PPV        RTRTPLE QFE+W Q L+PGFTP+DV  ALR+QSD
Sbjct: 37  STQSSPTENTDLPIPPVRT------RTRTPLETQFETWTQTLKPGFTPTDVQTALRSQSD 90

Query: 782 PDLALDIFRWTAQQRGYKHNDVSYLTMIEIVVSGKRYRVAETLVEEVIAGACPASLPLYN 603
           PDLA DIFRWTAQQR YKH+ ++Y  MI+I++ GKRYR AETLVEEVIAGAC  ++ LYN
Sbjct: 91  PDLAYDIFRWTAQQRNYKHSHLTYFAMIKILIDGKRYRHAETLVEEVIAGACEMNVQLYN 150

Query: 602 SMIKFCCGRKFLFNRAFDIYKKMLKCEDSEVKPXXXXXXXXXXXXLRKFSRLNVSYVYLH 423
           SMI+FCCGRK LFNRAFD+YKKML+ +D   KP            LR+F++LNV YVYLH
Sbjct: 151 SMIRFCCGRKLLFNRAFDVYKKMLQSDDC--KPTLETYTLLLNSLLRRFNKLNVCYVYLH 208

Query: 422 AVRSLTRQMKAYGVIPDTFVLNMIIKAYSKCLEVDEAVRVFHEMGLYGCEPNSYTYSYLV 243
           AV+SLT+QMKA GVIPDTF LNMIIKA++KC EVDEA+RVF EMGLYGCEPN Y+Y Y+V
Sbjct: 209 AVKSLTKQMKASGVIPDTFALNMIIKAFAKCREVDEAIRVFREMGLYGCEPNGYSYGYIV 268

Query: 242 KGLCEKGRVNQGLEFFREMRQKGLVPKGGTYVVLVCSLALERKFEDAIEILYDMLRNSMS 63
           KGLCEKGRV QGL F++EM++K L+P GGTY++L+CSLA++ +  +AI++++DML NSMS
Sbjct: 269 KGLCEKGRVGQGLGFYKEMKRKELIPSGGTYMILICSLAVDLRLGEAIDVVFDMLANSMS 328

Query: 62  PDFLTYKTVLEELCRDGRGD 3
           PDFLTY+TVLE LCR+G+ D
Sbjct: 329 PDFLTYRTVLEGLCREGKTD 348


>ref|XP_004293124.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 370

 Score =  431 bits (1107), Expect = e-118
 Identities = 208/303 (68%), Positives = 249/303 (82%)
 Frame = -3

Query: 911 APNSNPSPRTRTPLEKQFESWIQKLQPGFTPSDVAEALRAQSDPDLALDIFRWTAQQRGY 732
           A N   S RTRTPLEKQFE+WI KL+PGF P DV EAL+AQSDPDLALDIFRWTAQQR Y
Sbjct: 36  ARNPPDSFRTRTPLEKQFETWIHKLKPGFGPPDVDEALKAQSDPDLALDIFRWTAQQRNY 95

Query: 731 KHNDVSYLTMIEIVVSGKRYRVAETLVEEVIAGACPASLPLYNSMIKFCCGRKFLFNRAF 552
           KH+  +YLTMI+I++ G+RYR AETL+EEV+AGAC  S+PLYNS+I+FCCGRK LFNRAF
Sbjct: 96  KHSHSTYLTMIKILIDGRRYRHAETLLEEVVAGACEISVPLYNSIIRFCCGRKMLFNRAF 155

Query: 551 DIYKKMLKCEDSEVKPXXXXXXXXXXXXLRKFSRLNVSYVYLHAVRSLTRQMKAYGVIPD 372
           D+YKKML  E    KP            LR+F+   V YVYL +VRSL++QMKA GVIPD
Sbjct: 156 DVYKKMLNSESC--KPTLETYALLLNSLLRRFNNKTVCYVYLRSVRSLSKQMKASGVIPD 213

Query: 371 TFVLNMIIKAYSKCLEVDEAVRVFHEMGLYGCEPNSYTYSYLVKGLCEKGRVNQGLEFFR 192
           TFVLNMIIKAYSKCLEVDEA+++F EMGLYGCEPN+YTY Y+ KGLCEKGRV QGL F++
Sbjct: 214 TFVLNMIIKAYSKCLEVDEALQLFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLGFYK 273

Query: 191 EMRQKGLVPKGGTYVVLVCSLALERKFEDAIEILYDMLRNSMSPDFLTYKTVLEELCRDG 12
           EMR KGLVP   T++V++CSLALER++EDA ++++DML NS+SPD LTYKT+LE LCRDG
Sbjct: 274 EMRGKGLVPSSSTFMVVICSLALERRYEDASDVVFDMLSNSVSPDLLTYKTLLEGLCRDG 333

Query: 11  RGD 3
           +G+
Sbjct: 334 KGE 336


>gb|EXB84488.1| hypothetical protein L484_015819 [Morus notabilis]
          Length = 395

 Score =  429 bits (1102), Expect = e-117
 Identities = 217/360 (60%), Positives = 266/360 (73%), Gaps = 16/360 (4%)
 Frame = -3

Query: 1034 MRITLRTSLFSILRASLYSSLRPISAASDSSS-KTLIPKP-----------PVAPNSNPS 891
            M +++R  L + LR+  + S   +S +S  +   T+ P P           P  P  +P 
Sbjct: 1    MPVSVRRILTAALRSPKFPSPPLLSLSSPQTKLNTIFPFPQPLNSRPCSSSPPPPEPDPP 60

Query: 890  ----PRTRTPLEKQFESWIQKLQPGFTPSDVAEALRAQSDPDLALDIFRWTAQQRGYKHN 723
                 RTRTP+EKQFE+W+Q L+PGF+P+ V +AL  QSDPDLALDIFRWTAQQRGYKH 
Sbjct: 61   IPIRTRTRTPIEKQFETWVQTLKPGFSPAQVRDALEVQSDPDLALDIFRWTAQQRGYKHT 120

Query: 722  DVSYLTMIEIVVSGKRYRVAETLVEEVIAGACPASLPLYNSMIKFCCGRKFLFNRAFDIY 543
              +YLTMI+I++ G+RYR  ETLVEEVIAGAC  S+PLYNS+I+FCCGRK LFNRAFD+Y
Sbjct: 121  HDTYLTMIKILIDGRRYRHTETLVEEVIAGACEMSVPLYNSVIRFCCGRKLLFNRAFDVY 180

Query: 542  KKMLKCEDSEVKPXXXXXXXXXXXXLRKFSRLNVSYVYLHAVRSLTRQMKAYGVIPDTFV 363
            KKMLK  D   KP            L++F++LNV YVYL AVRSLT+QMKA GVIPDTFV
Sbjct: 181  KKMLKSPDC--KPNLETYTLLFNSLLKRFNKLNVCYVYLRAVRSLTKQMKASGVIPDTFV 238

Query: 362  LNMIIKAYSKCLEVDEAVRVFHEMGLYGCEPNSYTYSYLVKGLCEKGRVNQGLEFFREMR 183
            LNMIIKAY+KC EVDEAVRVF EMGL GCEPN+Y+Y Y+ KG+CEKGRV  G   ++EMR
Sbjct: 239  LNMIIKAYAKCREVDEAVRVFREMGLCGCEPNAYSYGYVAKGMCEKGRVGPGFGLYKEMR 298

Query: 182  QKGLVPKGGTYVVLVCSLALERKFEDAIEILYDMLRNSMSPDFLTYKTVLEELCRDGRGD 3
             KGLVP G T+++L+CSLALER+F+D +E+L DML   MSPD LTYKT+LE LCRDG+GD
Sbjct: 299  GKGLVPSGSTFMILICSLALERRFDDGVEVLRDMLDCKMSPDLLTYKTLLEGLCRDGKGD 358


>ref|XP_006297781.1| hypothetical protein CARUB_v10013818mg, partial [Capsella rubella]
            gi|482566490|gb|EOA30679.1| hypothetical protein
            CARUB_v10013818mg, partial [Capsella rubella]
          Length = 414

 Score =  426 bits (1096), Expect = e-117
 Identities = 215/347 (61%), Positives = 260/347 (74%), Gaps = 2/347 (0%)
 Frame = -3

Query: 1037 TMRITLRTSLFSILRASLYSSLRP--ISAASDSSSKTLIPKPPVAPNSNPSPRTRTPLEK 864
            TM  TLR  L  +  A+    L P  +S A +          P    S    RTRTPLE 
Sbjct: 37   TMSATLRR-LILLSSANRVCILSPTCLSTAVNRHLSLSFSSSPETHTSLSRTRTRTPLET 95

Query: 863  QFESWIQKLQPGFTPSDVAEALRAQSDPDLALDIFRWTAQQRGYKHNDVSYLTMIEIVVS 684
            QFE+WIQ L+PGFT SDV  ALRAQSDPDLALDIFRWTAQQRGYKHN  +Y  MI+  ++
Sbjct: 96   QFETWIQNLKPGFTNSDVVTALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHAMIKQAIT 155

Query: 683  GKRYRVAETLVEEVIAGACPASLPLYNSMIKFCCGRKFLFNRAFDIYKKMLKCEDSEVKP 504
            GKR +  ETL+EEVIAGAC  S+PLYN +I+FCCGRKFLFNRAFD+Y KML+ ++S  KP
Sbjct: 156  GKRNKFVETLIEEVIAGACEISVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDNS--KP 213

Query: 503  XXXXXXXXXXXXLRKFSRLNVSYVYLHAVRSLTRQMKAYGVIPDTFVLNMIIKAYSKCLE 324
                        L++F++LNV YVYLHAVRSLT+QMK+ GVIPDT+VLNMIIKAY+KCLE
Sbjct: 214  DLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTYVLNMIIKAYAKCLE 273

Query: 323  VDEAVRVFHEMGLYGCEPNSYTYSYLVKGLCEKGRVNQGLEFFREMRQKGLVPKGGTYVV 144
            VDEA+RVF EM LYG EPN+YTYSYL+KGLCEK R+ QGL F++EMR KG+VP G  Y+V
Sbjct: 274  VDEAIRVFREMALYGSEPNAYTYSYLIKGLCEKERLGQGLGFYKEMRSKGMVPNGSCYMV 333

Query: 143  LVCSLALERKFEDAIEILYDMLRNSMSPDFLTYKTVLEELCRDGRGD 3
            L+CSL++ER+  +A+E++YDML NS+SPD LTY TVL ELCR GRG+
Sbjct: 334  LICSLSMERRLNEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGN 380