BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00004580
         (1816 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP53789.1| retrotransposon protein, putative, unclassified [...    58   1e-26
emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group] g...    66   2e-26
gb|ADB85304.1| putative retrotransposon protein [Phyllostachys e...    62   3e-26
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]       66   3e-26
ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group] g...    60   3e-26
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]         63   4e-26
gb|ABA95319.1| retrotransposon protein, putative, unclassified [...    59   4e-26
emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]                 64   6e-26
emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]    61   9e-26
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]      63   2e-25
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]         62   3e-25
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...    59   2e-24
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...    66   3e-24
gb|ABD78322.1| polyprotein [Primula vulgaris]                          57   1e-23
gb|ABD78329.1| polyprotein [Primula vulgaris]                          57   1e-23
gb|AAM01024.1|AC090488_24 Putative retroelement [Oryza sativa Ja...    61   2e-23
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...    54   3e-23
gb|ABA93917.1| retrotransposon protein, putative, unclassified [...    59   4e-23
gb|AAM74239.1|AC074355_1 Putative retroelement [Oryza sativa Jap...    61   4e-23
ref|XP_003573116.1| PREDICTED: uncharacterized protein LOC100827...    61   5e-23

>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score = 57.8 bits (138), Expect(3) = 1e-26
 Identities = 34/105 (32%), Positives = 54/105 (51%)
 Frame = +2

Query: 293  QTVLRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYGLKPIHFGDI*IVDGIK 472
            ++ LR   +Q+PQKW  +LA  EW YN+++HTS++   FQ LYG  P    +  I   + 
Sbjct: 1372 ESYLRSMTFQEPQKWFSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQITEFAIPCNMS 1431

Query: 473  NETLGKMLMERRKIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKVG 607
             E     L ++  I   LK++      R+  + D  R E T ++G
Sbjct: 1432 EEA-RVTLEDKALILQKLKSSIGEAQRRIKFYADKGRSERTLELG 1475



 Score = 57.4 bits (137), Expect(3) = 1e-26
 Identities = 40/105 (38%), Positives = 54/105 (51%)
 Frame = +1

Query: 712  KQLARYYGPYKVIENFTVVAYKLQMPLRSQI*YHVFYVSTLKKKRKIEQYYMKVLQELCI 891
            K  ++YYGP+KVIE    VAYKLQ+P  + I + VF+VS LKK        M     L  
Sbjct: 1497 KLRSKYYGPFKVIEKMGAVAYKLQLPDGAGI-HPVFHVSQLKKHLGARAIPM---PNLPA 1552

Query: 892  L*SGGKPMIEPTKVLEQSYLRNVKEQGVQWLVQ*TNIDLREATLE 1026
            +   G+   EP  VL++  +    E   QWL+   N+   EAT E
Sbjct: 1553 IGPDGQIKTEPAAVLQRRMIPRHNEPVTQWLILWENLTPAEATWE 1597



 Score = 53.9 bits (128), Expect(3) = 1e-26
 Identities = 27/72 (37%), Positives = 42/72 (58%)
 Frame = +3

Query: 87   FSSAKVAKEFTDKLVKLHRISEYGGIHRNKIFSSQFLHELFKTTGFCLDMSSTYQPEYDY 266
            ++  +V + F D + KLH +       R+++F+S F  E+FKT    L  S+ + P+ D 
Sbjct: 1303 YTVEQVVQIFMDNIHKLHGMPMVIVTDRDRVFTSNFFQEIFKTQKVKLRFSTAHHPQTDG 1362

Query: 267  QMERVNQCLKLY 302
            Q ERVNQCL+ Y
Sbjct: 1363 QTERVNQCLESY 1374


>emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
            gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza sativa
            Japonica Group]
          Length = 1629

 Score = 65.9 bits (159), Expect(3) = 2e-26
 Identities = 37/105 (35%), Positives = 60/105 (57%)
 Frame = +2

Query: 293  QTVLRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYGLKPIHFGDI*IVDGIK 472
            +T LRCF +  P +W  +LA  E+ YN+SFH+++    F+ LYG KP +FG +      +
Sbjct: 1342 ETFLRCFVHACPSQWSRWLALAEYWYNTSFHSALGTTPFEVLYGHKPRYFG-LSASAACR 1400

Query: 473  NETLGKMLMERRKIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKVG 607
            ++ L + L ER K+  +++++      RM Q  D  R E +F VG
Sbjct: 1401 SDDLVEWLHEREKMQALIRDHLLRAQTRMKQQADQHRSERSFAVG 1445



 Score = 53.1 bits (126), Expect(3) = 2e-26
 Identities = 28/72 (38%), Positives = 43/72 (59%)
 Frame = +3

Query: 87   FSSAKVAKEFTDKLVKLHRISEYGGIHRNKIFSSQFLHELFKTTGFCLDMSSTYQPEYDY 266
            FS+  VA+ +   + +LH + +     R++IF+S     LF+  G  L MSS+Y P+ D 
Sbjct: 1273 FSALDVAEAYMQHIHRLHGLPQSLISDRDRIFTSTLWTTLFRLAGTQLRMSSSYHPQTDG 1332

Query: 267  QMERVNQCLKLY 302
            Q ERVNQCL+ +
Sbjct: 1333 QTERVNQCLETF 1344



 Score = 49.3 bits (116), Expect(3) = 2e-26
 Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
 Frame = +1

Query: 607  NWVYLKL*SFR*HLVEYKRNWKLSTRYSLVYKHNQKQLARYYGPYKVIENFTVVAYKLQM 786
            +WVYLKL  F               + S+V + N+K   R+YGP++V++    VAY+L +
Sbjct: 1446 DWVYLKLQPF--------------VQQSVVTRANRKLSFRFYGPFQVLDKVGTVAYRLDL 1491

Query: 787  PLRSQI*YHVFYVSTLKKKRKIEQYYMKVLQELCIL*SGGKPMIEPTKVLEQSYLRN--- 957
            P  S I + V +VS LKK     +   +V   L +L       + P ++L++ ++R    
Sbjct: 1492 PSSSLI-HPVVHVSQLKKALAPTE---QVHSPLPVLDPTNATHVCPAQILDRRFIRKGSK 1547

Query: 958  -VKEQGVQW 981
             V++  V+W
Sbjct: 1548 LVEQIQVRW 1556


>gb|ADB85304.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 335

 Score = 62.4 bits (150), Expect(3) = 3e-26
 Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
 Frame = +2

Query: 293 QTVLRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYGLKPIHFGDI*IVDGIK 472
           +  LR   +Q+P++W  +L   EW YN+++HTS++   FQ LYG  P   G++ I   + 
Sbjct: 112 EAYLRSMTFQEPREWMNWLTLAEWWYNTTYHTSLKVTPFQALYGYPPPQVGELSIPCNVS 171

Query: 473 NETLGKMLMERR-KIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKVG 607
            E   ++ +E++ ++ + LK+N      RM  + D  R E  F+VG
Sbjct: 172 EE--ARITVEQKEQMLEQLKSNLHNAQDRMKHYADKSRTERQFQVG 215



 Score = 55.5 bits (132), Expect(3) = 3e-26
 Identities = 28/72 (38%), Positives = 41/72 (56%)
 Frame = +3

Query: 87  FSSAKVAKEFTDKLVKLHRISEYGGIHRNKIFSSQFLHELFKTTGFCLDMSSTYQPEYDY 266
           +S   V + F D ++KLH +       R++IF+S    E+FK     L +S+ Y P+ D 
Sbjct: 43  YSVQHVVQVFMDNILKLHGMPITIVTDRDRIFTSHLFQEIFKMLKVTLRLSTAYHPQTDR 102

Query: 267 QMERVNQCLKLY 302
           Q ERVNQCL+ Y
Sbjct: 103 QTERVNQCLEAY 114



 Score = 50.1 bits (118), Expect(3) = 3e-26
 Identities = 34/103 (33%), Positives = 55/103 (53%)
 Frame = +1

Query: 712  KQLARYYGPYKVIENFTVVAYKLQMPLRSQI*YHVFYVSTLKKKRKIEQYYMKVLQELCI 891
            K  +++YGP++V+E    VAY+LQ+P  + I + VF+V+ LKK       +   L  L +
Sbjct: 237  KLRSKFYGPFRVLEKLGTVAYRLQLPEHTLI-HPVFHVNQLKKHL---GSHAVPLTGLPL 292

Query: 892  L*SGGKPMIEPTKVLEQSYLRNVKEQGVQWLVQ*TNIDLREAT 1020
            +   GK   EP  VL++  +    E   Q L+Q  N+   +AT
Sbjct: 293  VGENGKIKTEPVVVLDRRIVPRRNEPVAQLLIQWLNLGPEDAT 335


>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score = 65.9 bits (159), Expect(3) = 3e-26
 Identities = 33/72 (45%), Positives = 48/72 (66%)
 Frame = +3

Query: 87   FSSAKVAKEFTDKLVKLHRISEYGGIHRNKIFSSQFLHELFKTTGFCLDMSSTYQPEYDY 266
            F++AKVA+ F D + KLH +       R++IF+S F  +LF+ TG  L MSS+Y P+ D 
Sbjct: 1234 FTAAKVARVFLDNVYKLHGLPVNIISDRDRIFTSSFWQQLFQITGTNLSMSSSYHPQSDG 1293

Query: 267  QMERVNQCLKLY 302
            Q ER+NQCL+ +
Sbjct: 1294 QTERLNQCLETF 1305



 Score = 60.5 bits (145), Expect(3) = 3e-26
 Identities = 35/105 (33%), Positives = 55/105 (52%)
 Frame = +2

Query: 293  QTVLRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYGLKPIHFGDI*IVDGIK 472
            +T LRC+ +  P +W  +L+  E+ YN++ H+++ R  F+ LYG  P HFG I +   + 
Sbjct: 1303 ETFLRCYVHTCPSRWSAWLSVAEYWYNTTVHSTLGRTPFEVLYGHTPRHFG-ILVDTVVP 1361

Query: 473  NETLGKMLMERRKIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKVG 607
               L   L ER  +  V+K +      RM +  D +R E  F VG
Sbjct: 1362 QPELETWLKERELMTKVIKLHLHRAQDRMKRQADKQRSERVFSVG 1406



 Score = 41.2 bits (95), Expect(3) = 3e-26
 Identities = 31/115 (26%), Positives = 56/115 (48%)
 Frame = +1

Query: 607  NWVYLKL*SFR*HLVEYKRNWKLSTRYSLVYKHNQKQLARYYGPYKVIENFTVVAYKLQM 786
            +WVYLKL  +    V  + N KLS ++              +GP+++ +    VAY+L +
Sbjct: 1407 DWVYLKLQPYIQSSVATRSNHKLSFKF--------------FGPFQITDRLGSVAYRLAL 1452

Query: 787  PLRSQI*YHVFYVSTLKKKRKIEQYYMKVLQELCIL*SGGKPMIEPTKVLEQSYL 951
            P  S I + +F+VS LK+    +Q     L +         P+  PT++L++ ++
Sbjct: 1453 PASSSI-HPIFHVSQLKRVIGRDQRASPQLPQ------DVGPIQVPTRILQRRFI 1500


>ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group]
           gi|255678117|dbj|BAH94093.1| Os08g0123950, partial
           [Oryza sativa Japonica Group]
          Length = 783

 Score = 60.1 bits (144), Expect(3) = 3e-26
 Identities = 36/111 (32%), Positives = 58/111 (52%)
 Frame = +2

Query: 275 KGQSVPQTVLRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYGLKPIHFGDI* 454
           +G    +  L+CF    P KW  +L   E+ YN+S+H++++R  F+ LYG  P HFG I 
Sbjct: 464 RGNQCLEIYLKCFVQSAPSKWPSWLHLAEYWYNNSYHSTIDRTPFEALYGYPPRHFG-IS 522

Query: 455 IVDGIKNETLGKMLMERRKIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKVG 607
           I D   N  L   + +R+ +  +++ +      +M  F D KR    F+VG
Sbjct: 523 IRD-CDNSELITWMQDRKLMQQLVQQHLHRAQQQMKLFADKKRSFRQFQVG 572



 Score = 58.9 bits (141), Expect(3) = 3e-26
 Identities = 31/72 (43%), Positives = 43/72 (59%)
 Frame = +3

Query: 87  FSSAKVAKEFTDKLVKLHRISEYGGIHRNKIFSSQFLHELFKTTGFCLDMSSTYQPEYDY 266
           F++  VAK F   + KLH + +     R+KIF+SQ   +LF  +G  L  SS Y P+ D 
Sbjct: 401 FTAIDVAKAFMSNVYKLHGLPQIIISDRDKIFTSQLWEQLFLRSGTKLHYSSAYHPQSDG 460

Query: 267 QMERVNQCLKLY 302
           Q ER NQCL++Y
Sbjct: 461 QTERGNQCLEIY 472



 Score = 48.5 bits (114), Expect(3) = 3e-26
 Identities = 28/79 (35%), Positives = 43/79 (54%)
 Frame = +1

Query: 610 WVYLKL*SFR*HLVEYKRNWKLSTRYSLVYKHNQKQLARYYGPYKVIENFTVVAYKLQMP 789
           WVYLKL  +               + S+  + N K   +Y+GP++++E    VAYKLQ+P
Sbjct: 574 WVYLKLQPY--------------VQSSVAPRANHKLAFKYFGPFQILEKLGTVAYKLQLP 619

Query: 790 LRSQI*YHVFYVSTLKKKR 846
             S I + VF+VS LK+ +
Sbjct: 620 ATSSI-HPVFHVSLLKEAK 637


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score = 62.8 bits (151), Expect(3) = 4e-26
 Identities = 46/119 (38%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
 Frame = +1

Query: 697  YKHNQKQL-------ARYYGPYKVIENFTVVAYKLQMPLRSQI*YHVFYVSTLKKKRKIE 855
            Y+HN   L       ++YYGP++V+E    VAYKL +P  SQI + VF+VS LKK     
Sbjct: 1185 YRHNSLGLHSSLKLHSKYYGPFRVLERIGSVAYKLLLPASSQI-HPVFHVSQLKK----- 1238

Query: 856  QYYMKVLQE--LCIL*SGGKPMIEPTKVLEQSYLRNVKEQGVQWLVQ*TNIDLREATLE 1026
                KV+ E  L +    G  + +PT VLE+  +       VQW VQ  N+ L  AT E
Sbjct: 1239 HIGPKVVPEPGLPLTDDNGNILSQPTAVLERRLIPQNNAPVVQWKVQWANLPLSAATWE 1297



 Score = 52.4 bits (124), Expect(3) = 4e-26
 Identities = 30/105 (28%), Positives = 49/105 (46%)
 Frame = +2

Query: 293  QTVLRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYGLKPIHFGDI*IVDGIK 472
            +  LRC  + +P+KW   LA  +W YN+SFHT++    +Q L+G+ P    +  +   + 
Sbjct: 1072 ENYLRCMTFTKPKKWKSLLAYAKWWYNTSFHTTLGMTPYQALHGVPPPLLAESFLSPSLF 1131

Query: 473  NETLGKMLMERRKIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKVG 607
             +   K    +  I   +K++      RM  F D  R E    VG
Sbjct: 1132 TDARNK-AEAKSVITAAIKSSLLKAQARMKHFADMNRTERVLTVG 1175



 Score = 52.0 bits (123), Expect(3) = 4e-26
 Identities = 26/72 (36%), Positives = 41/72 (56%)
 Frame = +3

Query: 87   FSSAKVAKEFTDKLVKLHRISEYGGIHRNKIFSSQFLHELFKTTGFCLDMSSTYQPEYDY 266
            F++ ++  +F +   K H +       R++IF+SQ   ++F+  G  L  SS Y P+ D 
Sbjct: 1003 FTADQIVTQFVENYYKHHGLPAVIVSDRDRIFTSQTWKDVFEKAGVKLHFSSAYHPQTDG 1062

Query: 267  QMERVNQCLKLY 302
            Q ERVNQCL+ Y
Sbjct: 1063 QTERVNQCLENY 1074


>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score = 59.3 bits (142), Expect(3) = 4e-26
 Identities = 32/105 (30%), Positives = 52/105 (49%)
 Frame = +2

Query: 293  QTVLRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYGLKPIHFGDI*IVDGIK 472
            ++ LRC  +Q+PQ W  ++A  EW YN+++HT+++   F+ LYG  P    +  +   + 
Sbjct: 716  ESYLRCMTFQEPQNWCSWIALAEWWYNTTYHTAIQMTPFKALYGYSPPQISEFSVPCDVS 775

Query: 473  NETLGKMLMERRKIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKVG 607
             E     L E+  I   LK +      RM  + D  R E   +VG
Sbjct: 776  QEA-RVTLEEKETIVQKLKASMEDAQRRMKYYADRNRTERKLEVG 819



 Score = 54.7 bits (130), Expect(3) = 4e-26
 Identities = 39/112 (34%), Positives = 55/112 (49%)
 Frame = +1

Query: 712  KQLARYYGPYKVIENFTVVAYKLQMPLRSQI*YHVFYVSTLKKKRKIEQYYMKVLQELCI 891
            K   +YYGP+KV+E    VAY+LQ+P  + I + VF+VS LKK        M     L  
Sbjct: 841  KLRGKYYGPFKVLEKVGAVAYRLQLPEEAAI-HPVFHVSQLKKHLGTHAVPM---PNLPA 896

Query: 892  L*SGGKPMIEPTKVLEQSYLRNVKEQGVQWLVQ*TNIDLREATLEREEEILK 1047
            +   G+   EP  VL++  +        QWL+  +N+   EAT E    I K
Sbjct: 897  VGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWEDASYIQK 948



 Score = 53.1 bits (126), Expect(3) = 4e-26
 Identities = 27/72 (37%), Positives = 42/72 (58%)
 Frame = +3

Query: 87  FSSAKVAKEFTDKLVKLHRISEYGGIHRNKIFSSQFLHELFKTTGFCLDMSSTYQPEYDY 266
           ++  +V + F D + KLH +       R+++F+S F  E+FK+    L  S+ Y P+ D 
Sbjct: 647 YTVEEVVQVFMDNIHKLHGMPIAIVTDRDRVFTSTFFQEVFKSQKVQLRFSTAYHPQTDG 706

Query: 267 QMERVNQCLKLY 302
           Q ERVNQCL+ Y
Sbjct: 707 QTERVNQCLESY 718


>emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]
          Length = 642

 Score = 63.5 bits (153), Expect(3) = 6e-26
 Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
 Frame = +2

Query: 302 LRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYGLKPIHFG----DI*IVDGI 469
           LRCF +  P KW  +L   E+ YN+SFH+S++   F+ LYG  P HFG    D  I D  
Sbjct: 323 LRCFVHSVPTKWAAWLHLAEYWYNTSFHSSVQATPFEVLYGHSPSHFGIGSQDCAIPD-- 380

Query: 470 KNETLGKMLMERRKIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKVG 607
               L + L ERR + ++++ +      +M  F D KR   +F+VG
Sbjct: 381 ----LAQWLKERRLMQNLVQQHLHRAQQQMKHFADKKRSFRSFEVG 422



 Score = 58.9 bits (141), Expect(3) = 6e-26
 Identities = 31/72 (43%), Positives = 42/72 (58%)
 Frame = +3

Query: 87  FSSAKVAKEFTDKLVKLHRISEYGGIHRNKIFSSQFLHELFKTTGFCLDMSSTYQPEYDY 266
           F++  VAK F   + KLH +       R+K+F+SQ    LF+  G  L  SS Y P+ D 
Sbjct: 251 FTALSVAKLFMKHIFKLHGLPLVIISDRDKVFTSQLWEHLFEGAGTKLHFSSAYHPQSDA 310

Query: 267 QMERVNQCLKLY 302
           Q ERVNQCL++Y
Sbjct: 311 QTERVNQCLEIY 322



 Score = 44.3 bits (103), Expect(3) = 6e-26
 Identities = 27/77 (35%), Positives = 40/77 (51%)
 Frame = +1

Query: 607 NWVYLKL*SFR*HLVEYKRNWKLSTRYSLVYKHNQKQLARYYGPYKVIENFTVVAYKLQM 786
           +WVYLKL  +               + S+  + N K   +Y+GPY+V      VAY+LQ+
Sbjct: 423 DWVYLKLQPY--------------VQTSVAVRANHKLAFKYFGPYQVTAKIGTVAYQLQL 468

Query: 787 PLRSQI*YHVFYVSTLK 837
           P  + I + VF+VS LK
Sbjct: 469 PSSTSI-HPVFHVSQLK 484


>emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]
          Length = 647

 Score = 60.8 bits (146), Expect(3) = 9e-26
 Identities = 31/72 (43%), Positives = 44/72 (61%)
 Frame = +3

Query: 87  FSSAKVAKEFTDKLVKLHRISEYGGIHRNKIFSSQFLHELFKTTGFCLDMSSTYQPEYDY 266
           FS+  VA++F D ++KLH +       R+ IF S F HE FK +G  L MSS Y P+ D 
Sbjct: 310 FSAKMVAEKFVDGVIKLHGMPSSIISDRDPIFISNFWHEFFKLSGTQLKMSSAYHPQTDG 369

Query: 267 QMERVNQCLKLY 302
           Q E +N+C++ Y
Sbjct: 370 QTEVINRCVEQY 381



 Score = 56.6 bits (135), Expect(3) = 9e-26
 Identities = 35/102 (34%), Positives = 50/102 (49%)
 Frame = +2

Query: 302 LRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYGLKPIHFGDI*IVDGIKNET 481
           LRC  +QQP+KW+  L+  ++ YN ++H S     FQ LYG  P       +   + NE 
Sbjct: 382 LRCLVHQQPRKWYSLLSWADFWYNIAYHASTSMSPFQALYGRPPPMIPHYQLGSSLVNE- 440

Query: 482 LGKMLMERRKIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKVG 607
           + + L  R  +   LK N    + RM Q  DSKR +  F  G
Sbjct: 441 VNQNLASRDDLLHQLKLNLHQASNRMKQIADSKRRDIEFNEG 482



 Score = 48.5 bits (114), Expect(3) = 9e-26
 Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
 Frame = +1

Query: 682  RYSLVYKHNQKQLA-RYYGPYKVIENFTVVAYKLQMPLRSQI*YHVFYVSTLKKKRKIEQ 858
            R   V+K   ++LA R+Y P+ + +    VAY+LQ+P  S+I + VF+VS LKK      
Sbjct: 493  RQQTVFKRASQKLAHRFYEPFPIEKRIGKVAYQLQLPAGSRI-HPVFHVSLLKKTIGDSN 551

Query: 859  YYMKVLQELCIL*SGGKPMIEPTKVLEQSYLRNVKEQGVQWLVQ*TNIDLREATLEREEE 1038
                 L  L      G  +IEPT++++  + +       + LV+  N+ + +AT E   E
Sbjct: 552  ACCPTLPPLT---DDGAFIIEPTEIIDTRWFKKGGNFFEECLVKWKNLLVEDATWENAAE 608

Query: 1039 I 1041
            +
Sbjct: 609  L 609


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score = 63.2 bits (152), Expect(3) = 2e-25
 Identities = 34/105 (32%), Positives = 54/105 (51%)
 Frame = +2

Query: 293  QTVLRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYGLKPIHFGDI*IVDGIK 472
            ++ LR   +Q+P KW+ +LA  EW YN++FHT+++   F+ +YG  P    +  +   I 
Sbjct: 1236 ESYLRNMTFQEPHKWYSWLALAEWWYNTTFHTAIQMTPFKAMYGYSPPQINEFSVPCNIS 1295

Query: 473  NETLGKMLMERRKIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKVG 607
             E     + E+  I + LKN+      RM  F D  R E   +VG
Sbjct: 1296 EEA-RVTIEEKEAILNKLKNSLADAQHRMKYFADKNRTERNLEVG 1339



 Score = 51.6 bits (122), Expect(3) = 2e-25
 Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
 Frame = +1

Query: 712  KQLARYYGPYKVIENFTVVAYKLQMPLRSQI*YHVFYVSTLKKKRKIEQYYMKVLQELCI 891
            K  +++YGP+KV++    +AYKLQ+P  +QI + VF+VS LKK        M  L  +  
Sbjct: 1361 KLRSKFYGPFKVLQKIGQLAYKLQLPDDAQI-HPVFHVSQLKKHLGKHAIPMSNLPSVG- 1418

Query: 892  L*SGGKPMIEPTKVLEQSYLRNVKEQGV---QWLVQ*TNIDLREATLE 1026
                G+   EP  VL++   R V  +GV   QWL+   N+   EAT E
Sbjct: 1419 --PDGQIKTEPLAVLQR---RMVPRKGVAVTQWLILWQNLSPAEATWE 1461



 Score = 50.4 bits (119), Expect(3) = 2e-25
 Identities = 26/68 (38%), Positives = 38/68 (55%)
 Frame = +3

Query: 99   KVAKEFTDKLVKLHRISEYGGIHRNKIFSSQFLHELFKTTGFCLDMSSTYQPEYDYQMER 278
            +V + F + + KLH +       R++IF+S    E+FK     L  S+ Y P+ D Q ER
Sbjct: 1171 QVVEAFMNNIHKLHGMPMVIITDRDRIFTSSLFQEIFKAMKVKLRFSTAYHPQMDGQTER 1230

Query: 279  VNQCLKLY 302
            VNQCL+ Y
Sbjct: 1231 VNQCLESY 1238


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score = 62.0 bits (149), Expect(3) = 3e-25
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
 Frame = +2

Query: 293  QTVLRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYGLKPIHFGDI*IVDGIK 472
            ++ LR   +Q+P +WH +LA  EW YN+++HTS++   FQ LYG  P    +  +   + 
Sbjct: 1347 ESYLRSMTFQEPTRWHSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQINEFSVPCNVS 1406

Query: 473  NETLGKMLMERR-KIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKVG 607
             E   ++ +E++  I   LK + T    R+  + D  R E T  VG
Sbjct: 1407 EE--ARVTIEQKDAIIQKLKYSLTEAQRRIKHYADRNRSERTLAVG 1450



 Score = 51.2 bits (121), Expect(3) = 3e-25
 Identities = 26/72 (36%), Positives = 43/72 (59%)
 Frame = +3

Query: 87   FSSAKVAKEFTDKLVKLHRISEYGGIHRNKIFSSQFLHELFKTTGFCLDMSSTYQPEYDY 266
            ++  +V + F + + +LH +       R++IF+SQ   E+FK+    L  S++Y P+ D 
Sbjct: 1278 YTVEQVVELFMNNIHRLHGMPMAIITDRDRIFTSQLFQEIFKSMKVRLKFSTSYHPQTDG 1337

Query: 267  QMERVNQCLKLY 302
            Q ERVNQCL+ Y
Sbjct: 1338 QTERVNQCLESY 1349



 Score = 50.8 bits (120), Expect(3) = 3e-25
 Identities = 38/105 (36%), Positives = 53/105 (50%)
 Frame = +1

Query: 712  KQLARYYGPYKVIENFTVVAYKLQMPLRSQI*YHVFYVSTLKKKRKIEQYYMKVLQELCI 891
            K  +++YGP+K++E    VAYKLQ+P  S I + VF+VS LKK        M  L  +  
Sbjct: 1472 KLRSKFYGPFKIMEKVGRVAYKLQLPEGSNI-HPVFHVSQLKKHIGSRAVPMANLPSVG- 1529

Query: 892  L*SGGKPMIEPTKVLEQSYLRNVKEQGVQWLVQ*TNIDLREATLE 1026
                G+   EP  VL++  +        QWLV   N+   EAT E
Sbjct: 1530 --PDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEATWE 1572


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score = 59.3 bits (142), Expect(3) = 2e-24
 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
 Frame = +2

Query: 293  QTVLRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYG-LKPIHFGDI*IVDGI 469
            +T LRC C+ +PQ W  +LA  E+ YN+++H+S     F+ +YG + P+H     +    
Sbjct: 1262 ETYLRCMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQVPPVHLPY--LPGES 1319

Query: 470  KNETLGKMLMERRKIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKVG 607
            K   + + L ER  +   LK +      RM QF D  R E  F++G
Sbjct: 1320 KVAVVARSLQEREDMLLFLKFHLMRAQHRMKQFADQHRTEREFEIG 1365



 Score = 51.2 bits (121), Expect(3) = 2e-24
 Identities = 26/72 (36%), Positives = 39/72 (54%)
 Frame = +3

Query: 87   FSSAKVAKEFTDKLVKLHRISEYGGIHRNKIFSSQFLHELFKTTGFCLDMSSTYQPEYDY 266
            +S+  VA  + D + KLH         R+ +F+S+F  E F   G  L ++S Y P+ D 
Sbjct: 1193 YSALTVAHAYLDNVFKLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDG 1252

Query: 267  QMERVNQCLKLY 302
            Q E VN+CL+ Y
Sbjct: 1253 QTEVVNRCLETY 1264



 Score = 51.2 bits (121), Expect(3) = 2e-24
 Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
 Frame = +1

Query: 607  NWVYLKL*SFR*HLVEYKRNWKLSTRYSLVYKHNQKQLARYYGPYKVIENFTVVAYKLQM 786
            ++VY+KL  +R              + S+V + NQK   +Y+GPYK+I+    VAYKL +
Sbjct: 1366 DYVYVKLQPYR--------------QQSVVMRANQKLSPKYFGPYKIIDRCGEVAYKLAL 1411

Query: 787  PLRSQI*YHVFYVSTLK---KKRKIEQYYMKVLQELCIL*SGGKPMIEPTKVLEQSYLRN 957
            P  SQ+ + VF+VS LK          +   V+Q++            P KV+E+  +  
Sbjct: 1412 PSYSQV-HPVFHVSQLKVLVGNVSTTVHLPSVMQDVF--------EKVPEKVVERKMVNR 1462

Query: 958  VKEQGVQWLVQ*TNIDLREATLE 1026
              +   + LV+ +N  L EAT E
Sbjct: 1463 QGKAVTKVLVKWSNEPLEEATWE 1485


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score = 65.9 bits (159), Expect(3) = 3e-24
 Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
 Frame = +2

Query: 293  QTVLRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYGLKP---IHFGDI*IVD 463
            +T LRCFC ++P++W  +L   E+ YN++FH S+    FQ +YG  P   +++GD     
Sbjct: 2199 ETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGD----Q 2254

Query: 464  GIKNETLGKMLMERRKIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKVG 607
               N  L + L  R ++ +VLK +  V   +M +  D KR +  +KVG
Sbjct: 2255 STSNFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVG 2302



 Score = 48.1 bits (113), Expect(3) = 3e-24
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 3/127 (2%)
 Frame = +1

Query: 688  SLVYKHNQKQLARYYGPYKVIENFTVVAYKLQMPLRSQI*YHVFYVSTLKKKRKIEQYYM 867
            SL  K N+K   +++GP++V E   +VAYKLQ+P  S I + VF+VS L+K   +  + M
Sbjct: 2316 SLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPESSCI-HPVFHVSQLRK--MVGNHIM 2372

Query: 868  KVLQELCIL*SGGKPMIEPTKVLEQSYLRNVKEQGVQWLVQ*TNIDLREATLEREEEILK 1047
               +E+  L    + +  P ++    Y +N KE   + L++   +  ++A+ E  EE  K
Sbjct: 2373 LKPEEMACLNENYEWLAIPEEI--YGYSKN-KEGMWEVLIKWQGLPPQDASWEEYEEFQK 2429

Query: 1048 ---NSHL 1059
               N HL
Sbjct: 2430 KFPNFHL 2436



 Score = 47.0 bits (110), Expect(3) = 3e-24
 Identities = 25/72 (34%), Positives = 41/72 (56%)
 Frame = +3

Query: 87   FSSAKVAKEFTDKLVKLHRISEYGGIHRNKIFSSQFLHELFKTTGFCLDMSSTYQPEYDY 266
            F++  VA+ F  ++V+LH   +     R+K+F S F   +FK  G  L+ S+ Y P+ D 
Sbjct: 2130 FTAKTVAEIFVKEIVRLHGFPKSIVSDRDKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDG 2189

Query: 267  QMERVNQCLKLY 302
            Q E VN+ ++ Y
Sbjct: 2190 QTEVVNRSVETY 2201


>gb|ABD78322.1| polyprotein [Primula vulgaris]
          Length = 1359

 Score = 57.0 bits (136), Expect(3) = 1e-23
 Identities = 32/105 (30%), Positives = 53/105 (50%)
 Frame = +2

Query: 293  QTVLRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYGLKPIHFGDI*IVDGIK 472
            +T LRC+  Q P+ W  ++   E+ YNS+ HTS++   F+ LYG +P       ++    
Sbjct: 1149 ETYLRCYTSQYPKNWAKWIYLAEFWYNSTTHTSIKMPPFKALYGYEPPKLSHY-LLSKEH 1207

Query: 473  NETLGKMLMERRKIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKVG 607
               + ++L  + +I   LK N+     RM Q  D  R +  +KVG
Sbjct: 1208 KADIQELLQTKEEIMQALKTNYLEAQNRMKQNADLNRVDKCYKVG 1252



 Score = 54.7 bits (130), Expect(3) = 1e-23
 Identities = 38/111 (34%), Positives = 59/111 (53%)
 Frame = +1

Query: 607  NWVYLKL*SFR*HLVEYKRNWKLSTRYSLVYKHNQKQLARYYGPYKVIENFTVVAYKLQM 786
            ++VYLKL  +R              + S++ + NQK   R++GPYK+ E    VAYKL++
Sbjct: 1253 DYVYLKLQPYR--------------QQSVIRRRNQKLAPRFFGPYKITEKVGAVAYKLEL 1298

Query: 787  PLRSQI*YHVFYVSTLKKKRKIEQYYMKVLQELCIL*SGGKPMIEPTKVLE 939
            P  S I + VF++S LK   K E    +VL +L +    G+    P K+L+
Sbjct: 1299 PPTSGI-HPVFHISQLKLSIKDES---RVLPQLPLSDLNGRLKPIPVKILQ 1345



 Score = 47.0 bits (110), Expect(3) = 1e-23
 Identities = 26/72 (36%), Positives = 40/72 (55%)
 Frame = +3

Query: 87   FSSAKVAKEFTDKLVKLHRISEYGGIHRNKIFSSQFLHELFKTTGFCLDMSSTYQPEYDY 266
            F + ++A EF   + KLH + +     R+ IF+S F  ELF   G  L +S+ + P+ D 
Sbjct: 1080 FGAKELANEFLQNIFKLHGLPKKIISDRDTIFTSDFWKELFHLLGTKLLLSTAFHPQTDG 1139

Query: 267  QMERVNQCLKLY 302
            Q E VN+ L+ Y
Sbjct: 1140 QTEIVNKSLETY 1151


>gb|ABD78329.1| polyprotein [Primula vulgaris]
          Length = 383

 Score = 57.0 bits (136), Expect(3) = 1e-23
 Identities = 32/105 (30%), Positives = 53/105 (50%)
 Frame = +2

Query: 293 QTVLRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYGLKPIHFGDI*IVDGIK 472
           +T LRC+  Q P+ W  ++   E+ YNS+ HTS++   F+ LYG +P       ++    
Sbjct: 173 ETYLRCYTSQYPKNWAKWIYLAEFWYNSTTHTSIKMPPFKALYGYEPPKLSHY-LLSKEH 231

Query: 473 NETLGKMLMERRKIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKVG 607
              + ++L  + +I   LK N+     RM Q  D  R +  +KVG
Sbjct: 232 KADIQELLQTKEEIMQALKTNYLEAQNRMKQNADLNRVDKCYKVG 276



 Score = 54.7 bits (130), Expect(3) = 1e-23
 Identities = 38/111 (34%), Positives = 59/111 (53%)
 Frame = +1

Query: 607 NWVYLKL*SFR*HLVEYKRNWKLSTRYSLVYKHNQKQLARYYGPYKVIENFTVVAYKLQM 786
           ++VYLKL  +R              + S++ + NQK   R++GPYK+ E    VAYKL++
Sbjct: 277 DYVYLKLQPYR--------------QQSVIRRRNQKLAPRFFGPYKITEKVGAVAYKLEL 322

Query: 787 PLRSQI*YHVFYVSTLKKKRKIEQYYMKVLQELCIL*SGGKPMIEPTKVLE 939
           P  S I + VF++S LK   K E    +VL +L +    G+    P K+L+
Sbjct: 323 PPTSGI-HPVFHISQLKLSIKDES---RVLPQLPLSDLNGRLKPIPVKILQ 369



 Score = 47.0 bits (110), Expect(3) = 1e-23
 Identities = 26/72 (36%), Positives = 40/72 (55%)
 Frame = +3

Query: 87  FSSAKVAKEFTDKLVKLHRISEYGGIHRNKIFSSQFLHELFKTTGFCLDMSSTYQPEYDY 266
           F + ++A EF   + KLH + +     R+ IF+S F  ELF   G  L +S+ + P+ D 
Sbjct: 104 FGAKELANEFLQNIFKLHGLPKKIISDRDTIFTSDFWKELFHLLGTKLLLSTAFHPQTDG 163

Query: 267 QMERVNQCLKLY 302
           Q E VN+ L+ Y
Sbjct: 164 QTEIVNKSLETY 175


>gb|AAM01024.1|AC090488_24 Putative retroelement [Oryza sativa Japonica Group]
          Length = 954

 Score = 61.2 bits (147), Expect(3) = 2e-23
 Identities = 36/104 (34%), Positives = 56/104 (53%)
 Frame = +2

Query: 293 QTVLRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYGLKPIHFGDI*IVDGIK 472
           +T LRCF +  P +W  +LA  E+ YN+SFH+++    F+ LYG KP +FG +      +
Sbjct: 670 ETFLRCFVHACPSQWSRWLALAEYWYNTSFHSALGTTPFEVLYGHKPRYFG-LSANAACQ 728

Query: 473 NETLGKMLMERRKIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKV 604
           +  L   L ER +I  +++++      RM    D  R E TF V
Sbjct: 729 STELADWLHEREQIQSLIRDHLLRAQARMKFQADQHRSERTFVV 772



 Score = 52.8 bits (125), Expect(3) = 2e-23
 Identities = 43/145 (29%), Positives = 71/145 (48%)
 Frame = +1

Query: 607  NWVYLKL*SFR*HLVEYKRNWKLSTRYSLVYKHNQKQLARYYGPYKVIENFTVVAYKLQM 786
            +WVYLKL              +   + S+V + N+K   R+YGP++V+     VAYKL +
Sbjct: 774  DWVYLKL--------------QPVVQQSVVTRANRKLAFRFYGPFQVLSRVGEVAYKLAL 819

Query: 787  PLRSQI*YHVFYVSTLKKKRKIEQYYMKVLQELCIL*SGGKPMIEPTKVLEQSYLRNVKE 966
            P  S I + V +VS LKK     +    V  +L  + S     + P++VL++ ++R   +
Sbjct: 820  PATSLI-HPVVHVSQLKKALVPSEV---VYSQLPRIQSTAGTSVVPSQVLDRRFIRKGSK 875

Query: 967  QGVQWLVQ*TNIDLREATLEREEEI 1041
               Q LV+ +  D    T E  +E+
Sbjct: 876  MVEQLLVRWSVDDPHVVTWENAQEL 900



 Score = 43.9 bits (102), Expect(3) = 2e-23
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = +3

Query: 171 NKIFSSQFLHELFKTTGFCLDMSSTYQPEYDYQMERVNQCLKLY 302
           ++IF+S     LFK  G  L +SS+Y P+ D Q ERVNQCL+ +
Sbjct: 629 DRIFTSTLWATLFKLAGTQLRLSSSYHPQTDGQTERVNQCLETF 672


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score = 53.9 bits (128), Expect(3) = 3e-23
 Identities = 33/77 (42%), Positives = 44/77 (57%)
 Frame = +1

Query: 610  WVYLKL*SFR*HLVEYKRNWKLSTRYSLVYKHNQKQLARYYGPYKVIENFTVVAYKLQMP 789
            WVYLKL  +R   V +++N KLS RY              +GP+KV+     VAYKLQ+P
Sbjct: 1482 WVYLKLRPYRQSSVAHRKNEKLSQRY--------------FGPFKVLHRIGQVAYKLQLP 1527

Query: 790  LRSQI*YHVFYVSTLKK 840
              S I + VF+VS LK+
Sbjct: 1528 EHSTI-HPVFHVSQLKR 1543



 Score = 52.8 bits (125), Expect(3) = 3e-23
 Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
 Frame = +2

Query: 293  QTVLRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYGLKP---IHFGDI*IVD 463
            ++ LRCF  ++P  W  +L   E+ YN+S+H++ +   FQ +YG +P   + +GDI    
Sbjct: 1377 ESYLRCFAGRRPTSWFQWLPWAEYWYNTSYHSATKTTPFQAVYGREPPVLLRYGDI---- 1432

Query: 464  GIKNETLGKMLMERRKIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKV 604
               N  + ++L +R  +   L+ N  +   +M +  D  R +  F++
Sbjct: 1433 PTNNANVEELLKDRDGMLVELRENLEIAQAQMKKAADKSRRDVAFEI 1479



 Score = 50.8 bits (120), Expect(3) = 3e-23
 Identities = 29/72 (40%), Positives = 39/72 (54%)
 Frame = +3

Query: 87   FSSAKVAKEFTDKLVKLHRISEYGGIHRNKIFSSQFLHELFKTTGFCLDMSSTYQPEYDY 266
            F++  V + F   +VKLH         R++IF S F  ELFK  G  L  S+ Y P+ D 
Sbjct: 1308 FTAKTVVEAFIRDVVKLHGFPNTLVSDRDRIFLSGFWSELFKLQGTGLQKSTAYHPQTDG 1367

Query: 267  QMERVNQCLKLY 302
            Q E VN+CL+ Y
Sbjct: 1368 QTEVVNRCLESY 1379


>gb|ABA93917.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1091

 Score = 59.3 bits (142), Expect(3) = 4e-23
 Identities = 36/105 (34%), Positives = 55/105 (52%)
 Frame = +2

Query: 293  QTVLRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYGLKPIHFGDI*IVDGIK 472
            +T LRCF +  P  W  +LA  E+ YN+SFH+S+    F+ LYG KP +FG +       
Sbjct: 796  ETFLRCFVHACPSHWTKWLALAEYWYNTSFHSSLGMTPFEVLYGHKPRYFG-LSTNAACL 854

Query: 473  NETLGKMLMERRKIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKVG 607
            +  L   L +R K+ ++++ +      RM    D  R E +F VG
Sbjct: 855  SPELTDWLHDRAKMQNLIREHLLRAQTRMKMQADKGRSERSFAVG 899



 Score = 52.0 bits (123), Expect(3) = 4e-23
 Identities = 28/72 (38%), Positives = 42/72 (58%)
 Frame = +3

Query: 87  FSSAKVAKEFTDKLVKLHRISEYGGIHRNKIFSSQFLHELFKTTGFCLDMSSTYQPEYDY 266
           F++  VA+ F   + +LH + +     R++IF+S     LF   G  L MSS+Y P+ D 
Sbjct: 727 FTALDVAEAFMQHIHRLHGLPQSIISDRDRIFTSTLWTTLFCLAGTQLQMSSSYHPQTDG 786

Query: 267 QMERVNQCLKLY 302
           Q ERVNQCL+ +
Sbjct: 787 QTERVNQCLETF 798



 Score = 45.8 bits (107), Expect(3) = 4e-23
 Identities = 36/145 (24%), Positives = 66/145 (45%)
 Frame = +1

Query: 607  NWVYLKL*SFR*HLVEYKRNWKLSTRYSLVYKHNQKQLARYYGPYKVIENFTVVAYKLQM 786
            +WVYLKL  F               + S+V + N+K   R+YGP++++     + YK  +
Sbjct: 900  DWVYLKLQPF--------------VQQSVVTRANRKLSFRFYGPFQILARIGTMTYKFAL 945

Query: 787  PLRSQI*YHVFYVSTLKKKRKIEQYYMKVLQELCIL*SGGKPMIEPTKVLEQSYLRNVKE 966
            P  S + + V +VS LKK     + +      L +L      ++ P ++L++  +R   +
Sbjct: 946  P-ESSLIHPVVHVSQLKKALAPGESFQ---DSLPVLNPDDASIVVPAEILDRRLIRKGSK 1001

Query: 967  QGVQWLVQ*TNIDLREATLEREEEI 1041
            Q +   V+ +  D    T E   E+
Sbjct: 1002 QVLLVQVRWSGNDPTMVTCENYHEL 1026


>gb|AAM74239.1|AC074355_1 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1065

 Score = 61.2 bits (147), Expect(3) = 4e-23
 Identities = 36/104 (34%), Positives = 56/104 (53%)
 Frame = +2

Query: 293  QTVLRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYGLKPIHFGDI*IVDGIK 472
            +T LRCF +  P +W  +LA  E+ YN+SFH+++    F+ LYG KP +FG +      +
Sbjct: 833  ETFLRCFVHACPSQWSRWLALAEYWYNTSFHSALGTTPFEVLYGHKPRYFG-LSANAACQ 891

Query: 473  NETLGKMLMERRKIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKV 604
            +  L   L ER +I  +++++      RM    D  R E TF V
Sbjct: 892  STELADWLHEREQIQSLIRDHLLRAQARMKFQADQHRSERTFVV 935



 Score = 52.8 bits (125), Expect(3) = 4e-23
 Identities = 43/145 (29%), Positives = 71/145 (48%)
 Frame = +1

Query: 607  NWVYLKL*SFR*HLVEYKRNWKLSTRYSLVYKHNQKQLARYYGPYKVIENFTVVAYKLQM 786
            +WVYLKL              +   + S+V + N+K   R+YGP++V+     VAYKL +
Sbjct: 937  DWVYLKL--------------QPVVQQSVVTRANRKLAFRFYGPFQVLSRVGEVAYKLAL 982

Query: 787  PLRSQI*YHVFYVSTLKKKRKIEQYYMKVLQELCIL*SGGKPMIEPTKVLEQSYLRNVKE 966
            P  S I + V +VS LKK     +    V  +L  + S     + P++VL++ ++R   +
Sbjct: 983  PATSLI-HPVVHVSQLKKALVPSEV---VYSQLPRIQSTAGTSVVPSQVLDRRFIRKGSK 1038

Query: 967  QGVQWLVQ*TNIDLREATLEREEEI 1041
               Q LV+ +  D    T E  +E+
Sbjct: 1039 MVEQLLVRWSVDDPHVVTWENAQEL 1063



 Score = 43.1 bits (100), Expect(3) = 4e-23
 Identities = 21/43 (48%), Positives = 28/43 (65%)
 Frame = +3

Query: 174 KIFSSQFLHELFKTTGFCLDMSSTYQPEYDYQMERVNQCLKLY 302
           +IF+S     LFK  G  L +SS+Y P+ D Q ERVNQCL+ +
Sbjct: 793 QIFTSTLWATLFKLAGTQLRLSSSYHPQTDGQTERVNQCLETF 835


>ref|XP_003573116.1| PREDICTED: uncharacterized protein LOC100827899 [Brachypodium
            distachyon]
          Length = 1665

 Score = 61.2 bits (147), Expect(3) = 5e-23
 Identities = 30/72 (41%), Positives = 46/72 (63%)
 Frame = +3

Query: 87   FSSAKVAKEFTDKLVKLHRISEYGGIHRNKIFSSQFLHELFKTTGFCLDMSSTYQPEYDY 266
            F++A VA+ F D + +LH + +     R+K+F S F  +LFK     L++SS+Y P+ D 
Sbjct: 1336 FTAATVAQLFLDNVYRLHGLPKIIISDRDKVFISSFWQQLFKLADTTLNLSSSYHPQTDG 1395

Query: 267  QMERVNQCLKLY 302
            Q ER+NQCL+ Y
Sbjct: 1396 QTERLNQCLETY 1407



 Score = 58.9 bits (141), Expect(3) = 5e-23
 Identities = 32/105 (30%), Positives = 56/105 (53%)
 Frame = +2

Query: 293  QTVLRCFCYQQPQKWH*YLATVEW*YNSSFHTSMERRLFQTLYGLKPIHFGDI*IVDGIK 472
            +T LRC  + +P +W  +L   E+ YN++FH+++ R  F+ LYG KP +   +     + 
Sbjct: 1405 ETYLRCLVHAKPNRWARWLPQAEYWYNTNFHSALGRSPFEVLYGRKPRNLA-MQNTTQLS 1463

Query: 473  NETLGKMLMERRKIGDVLKNNFTVVTGRM*QFVDSKRYE*TFKVG 607
            N  L + L ER+ +  +++ +       M    + KR E TF+VG
Sbjct: 1464 NPDLAQWLQERQAMLPLIRQHLERAQAHMTAQANKKRMERTFEVG 1508



 Score = 36.6 bits (83), Expect(3) = 5e-23
 Identities = 15/39 (38%), Positives = 27/39 (69%)
 Frame = +1

Query: 688  SLVYKHNQKQLARYYGPYKVIENFTVVAYKLQMPLRSQI 804
            S++ + +QK   +Y+GPY +++    VAYKLQ+P  ++I
Sbjct: 1522 SVMPRASQKLSFKYFGPYTILQRVGTVAYKLQLPQGARI 1560