BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00003848
         (3890 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containi...  1102   0.0  
emb|CBI37948.3| unnamed protein product [Vitis vinifera]             1102   0.0  
gb|EOX97788.1| Pentatricopeptide repeat-containing protein, puta...  1090   0.0  
ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containi...  1083   0.0  
ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containi...  1083   0.0  
ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containi...  1077   0.0  
ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Popu...  1075   0.0  
gb|EMJ00876.1| hypothetical protein PRUPE_ppa000631mg [Prunus pe...  1051   0.0  
ref|XP_002534048.1| pentatricopeptide repeat-containing protein,...  1046   0.0  
ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containi...  1042   0.0  
ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containi...  1037   0.0  
gb|EXB36850.1| hypothetical protein L484_003235 [Morus notabilis]    1033   0.0  
ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citr...  1030   0.0  
ref|XP_004292148.1| PREDICTED: pentatricopeptide repeat-containi...  1028   0.0  
ref|XP_004147063.1| PREDICTED: pentatricopeptide repeat-containi...   998   0.0  
ref|XP_006587670.1| PREDICTED: pentatricopeptide repeat-containi...   991   0.0  
ref|XP_004505826.1| PREDICTED: pentatricopeptide repeat-containi...   988   0.0  
ref|XP_006592076.1| PREDICTED: pentatricopeptide repeat-containi...   976   0.0  
ref|XP_003607170.1| Pentatricopeptide repeat-containing protein ...   952   0.0  
ref|NP_195209.2| pentatricopeptide repeat protein MRL1 [Arabidop...   948   0.0  

>ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Vitis vinifera]
          Length = 1115

 Score = 1102 bits (2851), Expect = 0.0
 Identities = 579/985 (58%), Positives = 723/985 (73%), Gaps = 15/985 (1%)
 Frame = -2

Query: 3454 DLNSYVPVAEEEELVKEMKQINHGHESIVAEMQLVETSAARGANLATSTSELANVNMVAS 3275
            DL+      E    +  +++++H  +   A  Q  E +  +     T+TSE + +++++S
Sbjct: 137  DLHKETSEKESRATMDIVEEVSHASKDKEAPWQ--EIALMQEETHVTNTSESSRLDVLSS 194

Query: 3274 SVHDFLAMGEXXXXXXXXXXLMQSESDA-PAYTLDRQTCQKRLEDGGQET--GNDSKTQI 3104
            +  + +++ E           + SES          +  + +LE+   ET  G D  T +
Sbjct: 195  NAKNCVSVRETEEAGPSILPPLLSESGLLQPLVFATEMPELQLEERQMETEFGYDLSTPV 254

Query: 3103 LLIEREQYSASFPEVDLQKGMDVPERSSNEVSKEDEQSCYNFIYRDNLRQDLYTFYEPLK 2924
              ++ +  +AS P++   +G++  +       +E E   +  I+RD +R++LYTFYE  +
Sbjct: 255  --VQTKSIAASVPDIIALEGVNERKNRGGRPGEESEIISFTGIFRDTIREELYTFYEAKQ 312

Query: 2923 A------NVNNLGALPSITSFQE-NGRPSPFKSFTADAAKVFVRSELLHHTESR--EGER 2771
            +      N N +  L S  S  + NG     ++ T+  A++  ++    H+ +   EG+ 
Sbjct: 313  SVMKPMPNFNGIKTLASNASLLDGNGVSFQMRNATSKEAELSAQNS---HSSADYVEGKM 369

Query: 2770 DLAHYQGDSFNGRKDMEKGKEVPANKETKT--FHQHRPTDSFP-SHNLKRKQIHHLSHQF 2600
             L+ Y+  S   R D+ KGK  P +K  +      HR    FP S+ +  K+ +H S +F
Sbjct: 370  SLSCYKEGSSGKRNDLVKGKGFPRDKNGRLPPLSDHRNLSQFPLSNGMTVKEKYHDSEKF 429

Query: 2599 GAYNRLLKDGRLGDCIDLLEDMENKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQN 2420
             AYNRLL +GRL DCI LLEDME  GLLDM+KVYHA FF+ C+SQKAV EAFRF KLI  
Sbjct: 430  SAYNRLLSEGRLSDCIQLLEDMEKMGLLDMDKVYHAKFFKICRSQKAVTEAFRFAKLIPT 489

Query: 2419 PTLSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEV 2240
            PTLSTFNMLMSVCA+SQD+ GAFQVLQLV++AGLK DCKLYTTLISTCAKSGKVD MFEV
Sbjct: 490  PTLSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAKSGKVDAMFEV 549

Query: 2239 FHEMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGE 2060
            FHEMVNA VEPN HTYGALIDGC +AGQVAKAFGAYGIMRSK V+PDRVVFNALITACG+
Sbjct: 550  FHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQ 609

Query: 2059 SGAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTP 1880
            SGAVDRAFDVLAEMRAE  PIDPDH+TVGAL+KAC  AGQVDRAREVYKMID+Y I+GTP
Sbjct: 610  SGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTP 669

Query: 1879 EVYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQA 1700
            EVYTIAV+  SQ GDWEFA S+Y DMT KGV PDEMF+SA IDVAGHAG LDAAFE+IQ 
Sbjct: 670  EVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQE 729

Query: 1699 ARKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQ 1520
            AR +GI  GI++YSSLMGAC NA++WQKAL+LY D+K M +  TVS MNAL+TALC+ +Q
Sbjct: 730  ARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQ 789

Query: 1519 LQKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRC 1340
            L+KA  +L ++K+ G+ PNTITYSILLVASEK DD++VGLM+LSQA+KD VAPNLVMCRC
Sbjct: 790  LEKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRC 849

Query: 1339 IIGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVL 1160
            ++GMCLRRF+KAC +G+PVLS   GR Q+DN+WTS AL +YRE ++AG+ PT E LSQVL
Sbjct: 850  LVGMCLRRFEKACALGEPVLSFNSGRPQIDNKWTSSALMVYRETVSAGVIPTMELLSQVL 909

Query: 1159 GCLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPA 980
            GCL+ P DV+LR+RL+ENLGVS + S+ SN+CSL+DGFGEYD RAFSLLEEAASLG+V  
Sbjct: 910  GCLQFPRDVSLRNRLIENLGVSADASRRSNLCSLIDGFGEYDSRAFSLLEEAASLGVVSC 969

Query: 979  VSLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKG 800
            VS K+SP+IVD R LQ+  AEVYLLTVLKGLKHRLA GAKLP+++ILLP E TQ+  PKG
Sbjct: 970  VSFKKSPVIVDTRRLQIRIAEVYLLTVLKGLKHRLAAGAKLPSMTILLPTETTQVLAPKG 1029

Query: 799  EKTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADL 620
            EK IN+AGRISQA+A++LRRLGL Y GNESRGKIR+NG+  ++WFQPKL  P      +L
Sbjct: 1030 EKAINLAGRISQAVASMLRRLGLPYQGNESRGKIRINGLATRRWFQPKLAGPFSGKVDEL 1089

Query: 619  GLSQRRLGKGISFQQRDIRTGNLSL 545
              SQ RLG GIS QQR IRTGNLSL
Sbjct: 1090 SSSQSRLGTGISLQQRKIRTGNLSL 1114



 Score = 79.3 bits (194), Expect = 1e-11
 Identities = 44/106 (41%), Positives = 62/106 (58%)
 Frame = -3

Query: 3834 FAMEASLSPITSCAAVSSFLYPRCCCVRSLRKEFLGNGHNLRPPGLRSRRKCKNIGFQFQ 3655
            F+ ++    + SC  + S   P      +LR+EFLG GHNLRPPGLRS +KCKNI  +F+
Sbjct: 5    FSAKSQALTLISCTPLYSSPSPSSS-FSTLRREFLGCGHNLRPPGLRSPKKCKNI--RFR 61

Query: 3654 VYPSKRFVLRASLDSQSIXXXXXXXXXXVFTVFYLNYSKRKTNSEE 3517
            +    RF  +ASL SQ +           F+V +L+YS+R+ NS E
Sbjct: 62   IQSPSRFYFKASLGSQPVLVVVAVAAVFAFSVVFLSYSRRRKNSRE 107


>emb|CBI37948.3| unnamed protein product [Vitis vinifera]
          Length = 1550

 Score = 1102 bits (2851), Expect = 0.0
 Identities = 579/985 (58%), Positives = 723/985 (73%), Gaps = 15/985 (1%)
 Frame = -2

Query: 3454 DLNSYVPVAEEEELVKEMKQINHGHESIVAEMQLVETSAARGANLATSTSELANVNMVAS 3275
            DL+      E    +  +++++H  +   A  Q  E +  +     T+TSE + +++++S
Sbjct: 572  DLHKETSEKESRATMDIVEEVSHASKDKEAPWQ--EIALMQEETHVTNTSESSRLDVLSS 629

Query: 3274 SVHDFLAMGEXXXXXXXXXXLMQSESDA-PAYTLDRQTCQKRLEDGGQET--GNDSKTQI 3104
            +  + +++ E           + SES          +  + +LE+   ET  G D  T +
Sbjct: 630  NAKNCVSVRETEEAGPSILPPLLSESGLLQPLVFATEMPELQLEERQMETEFGYDLSTPV 689

Query: 3103 LLIEREQYSASFPEVDLQKGMDVPERSSNEVSKEDEQSCYNFIYRDNLRQDLYTFYEPLK 2924
              ++ +  +AS P++   +G++  +       +E E   +  I+RD +R++LYTFYE  +
Sbjct: 690  --VQTKSIAASVPDIIALEGVNERKNRGGRPGEESEIISFTGIFRDTIREELYTFYEAKQ 747

Query: 2923 A------NVNNLGALPSITSFQE-NGRPSPFKSFTADAAKVFVRSELLHHTESR--EGER 2771
            +      N N +  L S  S  + NG     ++ T+  A++  ++    H+ +   EG+ 
Sbjct: 748  SVMKPMPNFNGIKTLASNASLLDGNGVSFQMRNATSKEAELSAQNS---HSSADYVEGKM 804

Query: 2770 DLAHYQGDSFNGRKDMEKGKEVPANKETKT--FHQHRPTDSFP-SHNLKRKQIHHLSHQF 2600
             L+ Y+  S   R D+ KGK  P +K  +      HR    FP S+ +  K+ +H S +F
Sbjct: 805  SLSCYKEGSSGKRNDLVKGKGFPRDKNGRLPPLSDHRNLSQFPLSNGMTVKEKYHDSEKF 864

Query: 2599 GAYNRLLKDGRLGDCIDLLEDMENKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQN 2420
             AYNRLL +GRL DCI LLEDME  GLLDM+KVYHA FF+ C+SQKAV EAFRF KLI  
Sbjct: 865  SAYNRLLSEGRLSDCIQLLEDMEKMGLLDMDKVYHAKFFKICRSQKAVTEAFRFAKLIPT 924

Query: 2419 PTLSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEV 2240
            PTLSTFNMLMSVCA+SQD+ GAFQVLQLV++AGLK DCKLYTTLISTCAKSGKVD MFEV
Sbjct: 925  PTLSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAKSGKVDAMFEV 984

Query: 2239 FHEMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGE 2060
            FHEMVNA VEPN HTYGALIDGC +AGQVAKAFGAYGIMRSK V+PDRVVFNALITACG+
Sbjct: 985  FHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQ 1044

Query: 2059 SGAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTP 1880
            SGAVDRAFDVLAEMRAE  PIDPDH+TVGAL+KAC  AGQVDRAREVYKMID+Y I+GTP
Sbjct: 1045 SGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTP 1104

Query: 1879 EVYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQA 1700
            EVYTIAV+  SQ GDWEFA S+Y DMT KGV PDEMF+SA IDVAGHAG LDAAFE+IQ 
Sbjct: 1105 EVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQE 1164

Query: 1699 ARKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQ 1520
            AR +GI  GI++YSSLMGAC NA++WQKAL+LY D+K M +  TVS MNAL+TALC+ +Q
Sbjct: 1165 ARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQ 1224

Query: 1519 LQKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRC 1340
            L+KA  +L ++K+ G+ PNTITYSILLVASEK DD++VGLM+LSQA+KD VAPNLVMCRC
Sbjct: 1225 LEKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRC 1284

Query: 1339 IIGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVL 1160
            ++GMCLRRF+KAC +G+PVLS   GR Q+DN+WTS AL +YRE ++AG+ PT E LSQVL
Sbjct: 1285 LVGMCLRRFEKACALGEPVLSFNSGRPQIDNKWTSSALMVYRETVSAGVIPTMELLSQVL 1344

Query: 1159 GCLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPA 980
            GCL+ P DV+LR+RL+ENLGVS + S+ SN+CSL+DGFGEYD RAFSLLEEAASLG+V  
Sbjct: 1345 GCLQFPRDVSLRNRLIENLGVSADASRRSNLCSLIDGFGEYDSRAFSLLEEAASLGVVSC 1404

Query: 979  VSLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKG 800
            VS K+SP+IVD R LQ+  AEVYLLTVLKGLKHRLA GAKLP+++ILLP E TQ+  PKG
Sbjct: 1405 VSFKKSPVIVDTRRLQIRIAEVYLLTVLKGLKHRLAAGAKLPSMTILLPTETTQVLAPKG 1464

Query: 799  EKTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADL 620
            EK IN+AGRISQA+A++LRRLGL Y GNESRGKIR+NG+  ++WFQPKL  P      +L
Sbjct: 1465 EKAINLAGRISQAVASMLRRLGLPYQGNESRGKIRINGLATRRWFQPKLAGPFSGKVDEL 1524

Query: 619  GLSQRRLGKGISFQQRDIRTGNLSL 545
              SQ RLG GIS QQR IRTGNLSL
Sbjct: 1525 SSSQSRLGTGISLQQRKIRTGNLSL 1549


>gb|EOX97788.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
            cacao]
          Length = 1110

 Score = 1090 bits (2819), Expect = 0.0
 Identities = 579/983 (58%), Positives = 724/983 (73%), Gaps = 23/983 (2%)
 Frame = -2

Query: 3424 EEELVKEMKQINHGHESIVAEMQLVETSAARGANLATSTSELANVNMVASSVHDFLAMGE 3245
            +++L +E+K+  +  ES  A +Q  ET+ A   +L   TS+ +  + +A + + F     
Sbjct: 151  KDDLKEEIKEATYASESKEALLQFQETTVANDDSLLHKTSDSSGADCLAVTANGF----- 205

Query: 3244 XXXXXXXXXXLMQSESDAPAYTLDRQTCQKRLEDGGQE----TGNDSKTQILLIER-EQY 3080
                       +  ES A    L        LE G  E        S+  +  +ER  ++
Sbjct: 206  ----------DVSEESGATDLPLPPTVL---LESGAVEPLMFAAEMSELHLEEVERVNEF 252

Query: 3079 SASFPEVDLQKGMDVPERSSNEVSKED--------EQSCYNFIYRDNLRQDLYTFYEP-- 2930
             A  P + ++     PE S++ V  +D        E + +  I+++++R++L+TFYE   
Sbjct: 253  EADLPRLAVE-----PESSASSVLVKDAHVLVGEGEVTRHYDIFKESVREELHTFYEADQ 307

Query: 2929 --LKANVNNLGALPS---ITSFQENGRPSPFKSFTADAAKVFVRSELLHHTESREGERDL 2765
               K++ N  G  P+   + S   N   S  ++     A++  ++  L   +  EG+   
Sbjct: 308  LVAKSSTNLNGLKPASSRVFSPNSNSFSSLMQNSELKRAQLSSKN-CLQTADMAEGKVAQ 366

Query: 2764 AHYQGDSFNGRKDMEKGKEVPANKETKTFHQHRPTD--SFPSHN-LKRKQIHHLSHQFGA 2594
            A     S + R+D  +G+E+P +K  +   Q + T    FP  N +     H     F +
Sbjct: 367  ACSNRVSSHKRQDFGRGREIPRDKGKRHSIQEKNTKLPKFPFPNGMLADNKHRPEDHFRS 426

Query: 2593 YNRLLKDGRLGDCIDLLEDMENKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQNPT 2414
            YNRLL+DGRL DC+DLLEDME +GLLDMNKVYHA FF+ C  QKAVKEAF FTKLI NPT
Sbjct: 427  YNRLLRDGRLSDCVDLLEDMEQRGLLDMNKVYHAKFFKICNRQKAVKEAFCFTKLIPNPT 486

Query: 2413 LSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEVFH 2234
            LSTFNMLMSVCASSQD++GAF+VL++VQ+AG K DCKLYTTLISTCAKSGKVDTMFEVFH
Sbjct: 487  LSTFNMLMSVCASSQDSDGAFEVLRIVQEAGFKADCKLYTTLISTCAKSGKVDTMFEVFH 546

Query: 2233 EMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGESG 2054
            EMVN+GVEPN +TYGALIDGCA+AGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG+SG
Sbjct: 547  EMVNSGVEPNVNTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSG 606

Query: 2053 AVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEV 1874
            AVDRAFDVLAEM AE  PIDPDHVTVGAL+KAC+ A QVDRAREVYKMI E+ I+GTPEV
Sbjct: 607  AVDRAFDVLAEMMAETQPIDPDHVTVGALIKACSNADQVDRAREVYKMIHEFSIKGTPEV 666

Query: 1873 YTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAAR 1694
            YTIAVNCCSQTGDWEFACS+Y+DM  KGV+PDE+FISA IDVAGHAG LDAAFEI++ A+
Sbjct: 667  YTIAVNCCSQTGDWEFACSVYSDMKGKGVAPDEVFISALIDVAGHAGKLDAAFEILEEAK 726

Query: 1693 KEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQLQ 1514
             +GI+ GI++YSSLMGAC NAR+WQKAL+LYE++K + + LTVS +NAL+T+LC+ DQL 
Sbjct: 727  NQGINVGIVSYSSLMGACSNARNWQKALELYENIKAVKLNLTVSTVNALITSLCEADQLP 786

Query: 1513 KATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCII 1334
            KA  IL E+++ G+ PNT+TYSILLVASE+ DDLEVGLMLLSQA+KDGVAPNL+M RCII
Sbjct: 787  KAMEILSEMEELGLCPNTVTYSILLVASERKDDLEVGLMLLSQARKDGVAPNLIMARCII 846

Query: 1333 GMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLGC 1154
            GMCLRRF+KAC VG+PVLS   G+  ++N+WTS AL +YRE I AG APT + +SQ+LGC
Sbjct: 847  GMCLRRFEKACKVGEPVLSFNSGQPHIENKWTSVALAVYRETIVAGTAPTMDVISQILGC 906

Query: 1153 LKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAVS 974
            L+LP D +L+ RLVENL VS + ++ S++ SL+DGFGEYDPRAFSLLEEAAS GIVP VS
Sbjct: 907  LQLPRDDSLKSRLVENLDVSADATRCSSLSSLIDGFGEYDPRAFSLLEEAASFGIVPCVS 966

Query: 973  LKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGEK 794
             K+SPI+VD R LQ++ AEVYLLT+LKGLKHR A GAKLP++S+LLPLEKTQ+ TP+ EK
Sbjct: 967  FKESPIVVDARELQINMAEVYLLTILKGLKHRRAAGAKLPSISVLLPLEKTQVLTPEREK 1026

Query: 793  TINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLGL 614
            +IN+AGRI QAIAALLRR+GL Y GNES GKIR+NG+ +K+WFQPKL SP    P +   
Sbjct: 1027 SINLAGRIGQAIAALLRRIGLPYQGNESFGKIRINGLALKRWFQPKLASPFTGKPGEWNA 1086

Query: 613  SQRRLGKGISFQQRDIRTGNLSL 545
            SQ RLGKGIS QQR+IRTGNLSL
Sbjct: 1087 SQMRLGKGISHQQRNIRTGNLSL 1109


>ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 1109

 Score = 1083 bits (2800), Expect = 0.0
 Identities = 569/903 (63%), Positives = 682/903 (75%), Gaps = 16/903 (1%)
 Frame = -2

Query: 3205 SESDAPAYTLDRQTCQKRLEDGGQETGNDSKTQILLIEREQYSASFPEVDLQKGMDVPER 3026
            +ESDA   +   ++    L++   ET   +      +  E+  A FP +++    +  ++
Sbjct: 220  TESDAVPSSFVEESKNICLQEHLHETKMSNILTTEEVSSERSVALFPAINIDNRPEKTKK 279

Query: 3025 SSNEVSK------------EDEQSCYNFIYRDNLRQDLYTFYEPLKANVNNLGALPSITS 2882
               E+              EDE + +N I+RD+ R+DLY+F+E    ++N   AL S  S
Sbjct: 280  MDQELMTKDGCKKAHKFVAEDEVTIHNLIFRDSTREDLYSFFEASSKSLNGQDALTSHAS 339

Query: 2881 FQENGRPSPFKSFTADAAKVF-VRSELLHHTESREGERDLAHYQGDSFNGRKDMEKGKEV 2705
             Q  G  SP       A+KVF VR+E        E +R    Y+   FN +KD  K  + 
Sbjct: 340  LQGIGAFSP-------ASKVFSVRAE------DFEEKRSHGCYKEGPFN-KKDFLKRMQH 385

Query: 2704 PANKETKTFHQHRPTDSFPSHNLKRKQI---HHLSHQFGAYNRLLKDGRLGDCIDLLEDM 2534
              NKE      +  +      N K  Q+    + S QF  Y   L++GRL DCI++LEDM
Sbjct: 386  FTNKEKSILPDNGASKQLQIPNPKGIQVCDRPNPSDQFRDYRHFLREGRLMDCIEILEDM 445

Query: 2533 ENKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGA 2354
               G L+M+KVYHAGFF+ CKSQKAVKEAFRFTKLI+NPTLSTFNML++VCASS+D E A
Sbjct: 446  GRHGSLNMDKVYHAGFFQVCKSQKAVKEAFRFTKLIRNPTLSTFNMLLTVCASSRDLERA 505

Query: 2353 FQVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDG 2174
            FQV QLV++ GLK DCKLYTTLISTCAK+GKVDTMFEVFHEMVNAGVEPN +TYG LIDG
Sbjct: 506  FQVFQLVRETGLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNANTYGTLIDG 565

Query: 2173 CAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMRAEVHPID 1994
            CAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG+SGAVDRAFDVL+EM+AE  PI+
Sbjct: 566  CAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLSEMKAEARPIE 625

Query: 1993 PDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFACSI 1814
            PD +T+GALMKACA AGQVDRA EVY+MID+  I+GTPEVYTIAVNCCSQ G+WEFA SI
Sbjct: 626  PDQITIGALMKACANAGQVDRALEVYRMIDKCDIKGTPEVYTIAVNCCSQNGNWEFARSI 685

Query: 1813 YNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAARKEGIHAGIIAYSSLMGACCN 1634
            Y+DM+ KGV+PDEMFISA IDVAGH G L+AAFE+++ AR +GI+ G I+YSSLMGACCN
Sbjct: 686  YDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEARTKGINLGSISYSSLMGACCN 745

Query: 1633 ARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQLQKATNILFELKKQGVRPNTIT 1454
            A++WQKAL+LYED+K +N+K TVSMMNAL+TALC  DQ QKA  I  E+KK  + PNTIT
Sbjct: 746  AQNWQKALELYEDIKGINLKPTVSMMNALITALCYADQYQKALEIFSEMKKVDLCPNTIT 805

Query: 1453 YSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCIIGMCLRRFQKACIVGDPVLSL 1274
            YS LLVASEK DDL+VGLMLLS AKKDGVAPNLVMCRC++ MC RRFQKAC +G+PVLS 
Sbjct: 806  YSTLLVASEKKDDLDVGLMLLSHAKKDGVAPNLVMCRCLLAMCSRRFQKACTLGEPVLSN 865

Query: 1273 TPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLGCLKLPHDVNLRDRLVENLGVS 1094
              GRLQLD++WTS AL +YRE I AG+ PT EELS VLGCL+LP D +L++RL+ENLG++
Sbjct: 866  NSGRLQLDSKWTSLALMVYRETIGAGVVPTIEELSLVLGCLQLPCDASLKERLIENLGLT 925

Query: 1093 TNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAVSLKQSPIIVDVRNLQVHTAEV 914
               SKGSN+CSL+DGFGEYDPRA SLLEEAASLGIVP  S K SPI+VDVRNL +H A+V
Sbjct: 926  VETSKGSNLCSLIDGFGEYDPRACSLLEEAASLGIVPLTSFKGSPIVVDVRNLHIHAAQV 985

Query: 913  YLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGEKTINIAGRISQAIAALLRRLG 734
            YLLTVLK LKHRLA GAK+PN+SILLP+E++ IQTP GEKTI IAGRI++A+AALLRRLG
Sbjct: 986  YLLTVLKSLKHRLAAGAKIPNISILLPVEQSHIQTPTGEKTIKIAGRINRAVAALLRRLG 1045

Query: 733  LTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLGLSQRRLGKGISFQQRDIRTGN 554
            L Y GNES GKIR+NGV+VK+WFQPKL+SP      D   SQ RL KGIS QQR IRTG+
Sbjct: 1046 LPYQGNESFGKIRINGVIVKRWFQPKLESPFSWEQTDFSFSQTRLRKGISHQQRTIRTGD 1105

Query: 553  LSL 545
            LSL
Sbjct: 1106 LSL 1108



 Score = 79.7 bits (195), Expect = 9e-12
 Identities = 50/110 (45%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
 Frame = -3

Query: 3840 SKFAMEASLSPITSCAAVSSFLYPRCCCVRSLRKEFL-GNGHNLRPPGLRSRRKCKNIGF 3664
            S F+ +     + SC+ +SS L PR        ++FL G+ H+LRPPGL SRR+C+NIGF
Sbjct: 3    SIFSPKPHTLSLLSCSPISSSLVPR--------RQFLSGSTHSLRPPGLHSRRRCRNIGF 54

Query: 3663 QFQVYPSKRFVLRASLDSQSIXXXXXXXXXXVFTVFYLNYSKRKTNSEEK 3514
            QF    S RFVLRASLDSQ++            TV +L +SKR TN+  K
Sbjct: 55   QFGSNTS-RFVLRASLDSQTV-VFASVVTISALTVVFLEFSKRNTNANAK 102


>ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 1140

 Score = 1083 bits (2800), Expect = 0.0
 Identities = 569/903 (63%), Positives = 682/903 (75%), Gaps = 16/903 (1%)
 Frame = -2

Query: 3205 SESDAPAYTLDRQTCQKRLEDGGQETGNDSKTQILLIEREQYSASFPEVDLQKGMDVPER 3026
            +ESDA   +   ++    L++   ET   +      +  E+  A FP +++    +  ++
Sbjct: 251  TESDAVPSSFVEESKNICLQEHLHETKMSNILTTEEVSSERSVALFPAINIDNRPEKTKK 310

Query: 3025 SSNEVSK------------EDEQSCYNFIYRDNLRQDLYTFYEPLKANVNNLGALPSITS 2882
               E+              EDE + +N I+RD+ R+DLY+F+E    ++N   AL S  S
Sbjct: 311  MDQELMTKDGCKKAHKFVAEDEVTIHNLIFRDSTREDLYSFFEASSKSLNGQDALTSHAS 370

Query: 2881 FQENGRPSPFKSFTADAAKVF-VRSELLHHTESREGERDLAHYQGDSFNGRKDMEKGKEV 2705
             Q  G  SP       A+KVF VR+E        E +R    Y+   FN +KD  K  + 
Sbjct: 371  LQGIGAFSP-------ASKVFSVRAE------DFEEKRSHGCYKEGPFN-KKDFLKRMQH 416

Query: 2704 PANKETKTFHQHRPTDSFPSHNLKRKQI---HHLSHQFGAYNRLLKDGRLGDCIDLLEDM 2534
              NKE      +  +      N K  Q+    + S QF  Y   L++GRL DCI++LEDM
Sbjct: 417  FTNKEKSILPDNGASKQLQIPNPKGIQVCDRPNPSDQFRDYRHFLREGRLMDCIEILEDM 476

Query: 2533 ENKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGA 2354
               G L+M+KVYHAGFF+ CKSQKAVKEAFRFTKLI+NPTLSTFNML++VCASS+D E A
Sbjct: 477  GRHGSLNMDKVYHAGFFQVCKSQKAVKEAFRFTKLIRNPTLSTFNMLLTVCASSRDLERA 536

Query: 2353 FQVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDG 2174
            FQV QLV++ GLK DCKLYTTLISTCAK+GKVDTMFEVFHEMVNAGVEPN +TYG LIDG
Sbjct: 537  FQVFQLVRETGLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNANTYGTLIDG 596

Query: 2173 CAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMRAEVHPID 1994
            CAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG+SGAVDRAFDVL+EM+AE  PI+
Sbjct: 597  CAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLSEMKAEARPIE 656

Query: 1993 PDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFACSI 1814
            PD +T+GALMKACA AGQVDRA EVY+MID+  I+GTPEVYTIAVNCCSQ G+WEFA SI
Sbjct: 657  PDQITIGALMKACANAGQVDRALEVYRMIDKCDIKGTPEVYTIAVNCCSQNGNWEFARSI 716

Query: 1813 YNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAARKEGIHAGIIAYSSLMGACCN 1634
            Y+DM+ KGV+PDEMFISA IDVAGH G L+AAFE+++ AR +GI+ G I+YSSLMGACCN
Sbjct: 717  YDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEARTKGINLGSISYSSLMGACCN 776

Query: 1633 ARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQLQKATNILFELKKQGVRPNTIT 1454
            A++WQKAL+LYED+K +N+K TVSMMNAL+TALC  DQ QKA  I  E+KK  + PNTIT
Sbjct: 777  AQNWQKALELYEDIKGINLKPTVSMMNALITALCYADQYQKALEIFSEMKKVDLCPNTIT 836

Query: 1453 YSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCIIGMCLRRFQKACIVGDPVLSL 1274
            YS LLVASEK DDL+VGLMLLS AKKDGVAPNLVMCRC++ MC RRFQKAC +G+PVLS 
Sbjct: 837  YSTLLVASEKKDDLDVGLMLLSHAKKDGVAPNLVMCRCLLAMCSRRFQKACTLGEPVLSN 896

Query: 1273 TPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLGCLKLPHDVNLRDRLVENLGVS 1094
              GRLQLD++WTS AL +YRE I AG+ PT EELS VLGCL+LP D +L++RL+ENLG++
Sbjct: 897  NSGRLQLDSKWTSLALMVYRETIGAGVVPTIEELSLVLGCLQLPCDASLKERLIENLGLT 956

Query: 1093 TNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAVSLKQSPIIVDVRNLQVHTAEV 914
               SKGSN+CSL+DGFGEYDPRA SLLEEAASLGIVP  S K SPI+VDVRNL +H A+V
Sbjct: 957  VETSKGSNLCSLIDGFGEYDPRACSLLEEAASLGIVPLTSFKGSPIVVDVRNLHIHAAQV 1016

Query: 913  YLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGEKTINIAGRISQAIAALLRRLG 734
            YLLTVLK LKHRLA GAK+PN+SILLP+E++ IQTP GEKTI IAGRI++A+AALLRRLG
Sbjct: 1017 YLLTVLKSLKHRLAAGAKIPNISILLPVEQSHIQTPTGEKTIKIAGRINRAVAALLRRLG 1076

Query: 733  LTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLGLSQRRLGKGISFQQRDIRTGN 554
            L Y GNES GKIR+NGV+VK+WFQPKL+SP      D   SQ RL KGIS QQR IRTG+
Sbjct: 1077 LPYQGNESFGKIRINGVIVKRWFQPKLESPFSWEQTDFSFSQTRLRKGISHQQRTIRTGD 1136

Query: 553  LSL 545
            LSL
Sbjct: 1137 LSL 1139



 Score = 79.7 bits (195), Expect = 9e-12
 Identities = 50/110 (45%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
 Frame = -3

Query: 3840 SKFAMEASLSPITSCAAVSSFLYPRCCCVRSLRKEFL-GNGHNLRPPGLRSRRKCKNIGF 3664
            S F+ +     + SC+ +SS L PR        ++FL G+ H+LRPPGL SRR+C+NIGF
Sbjct: 3    SIFSPKPHTLSLLSCSPISSSLVPR--------RQFLSGSTHSLRPPGLHSRRRCRNIGF 54

Query: 3663 QFQVYPSKRFVLRASLDSQSIXXXXXXXXXXVFTVFYLNYSKRKTNSEEK 3514
            QF    S RFVLRASLDSQ++            TV +L +SKR TN+  K
Sbjct: 55   QFGSNTS-RFVLRASLDSQTV-VFASVVTISALTVVFLEFSKRNTNANAK 102


>ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Solanum lycopersicum]
          Length = 1182

 Score = 1077 bits (2785), Expect = 0.0
 Identities = 566/903 (62%), Positives = 680/903 (75%), Gaps = 16/903 (1%)
 Frame = -2

Query: 3205 SESDAPAYTLDRQTCQKRLEDGGQETGNDSKTQILLIEREQYSASFPEVDLQ------KG 3044
            +ESDA   +   ++    L++   ET   +      +  E+  A FP +++       K 
Sbjct: 293  TESDAVPSSFMEESKNINLQEHLHETKMSNILTTEEVSSERSVALFPTINIDNRTEKTKI 352

Query: 3043 MDVPERSSNEVSK------EDEQSCYNFIYRDNLRQDLYTFYEPLKANVNNLGALPSITS 2882
            MD      +E+ K      EDE   +N I+RD+ R+DLY+F+     ++N   AL S  S
Sbjct: 353  MDQELMMKDELKKAHRFVAEDEVIIHNLIFRDSTREDLYSFFGASSKSLNGQDALTSHAS 412

Query: 2881 FQENGRPSP-FKSFTADAAKVFVRSELLHHTESREGERDLAHYQGDSFNGRKDMEKGKEV 2705
             Q  G  SP  K+F+  A             E  E +R    Y+   FN ++D  K  + 
Sbjct: 413  RQGIGTFSPPSKAFSVRA-------------EDFEEKRSHGCYKERPFN-KEDFVKRMQQ 458

Query: 2704 PANKETKTFHQHRPTDSFPSHNLKRKQI---HHLSHQFGAYNRLLKDGRLGDCIDLLEDM 2534
              NKE      +  +      N K  Q+    + S QF AY   L++GRL DCI +LEDM
Sbjct: 459  FTNKEKSILSDNGASKQLQVSNPKSIQVCDRPNPSDQFRAYRHFLREGRLMDCIKILEDM 518

Query: 2533 ENKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGA 2354
            E  G L+M+KVYHAGFF+ CKSQKAVKEAFRFTKLIQNPTLSTFNML+SVCASS+D E A
Sbjct: 519  ERHGSLNMDKVYHAGFFQVCKSQKAVKEAFRFTKLIQNPTLSTFNMLLSVCASSRDLERA 578

Query: 2353 FQVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDG 2174
            FQVLQLV++ GLK DCKLYTTLISTCAK+GKVDTMFEVFHEMVNAGVEPN +TYGALIDG
Sbjct: 579  FQVLQLVRETGLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNANTYGALIDG 638

Query: 2173 CAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMRAEVHPID 1994
            CAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG+SGAVDRAFDVL+EM+AE  PI+
Sbjct: 639  CAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLSEMKAEARPIE 698

Query: 1993 PDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFACSI 1814
            PD +T+GALMKACA +GQVDRA EVY+MID+  I+GTPEVYTIAVNCCSQ G+WEFA SI
Sbjct: 699  PDQITIGALMKACANSGQVDRALEVYRMIDKCDIKGTPEVYTIAVNCCSQNGNWEFARSI 758

Query: 1813 YNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAARKEGIHAGIIAYSSLMGACCN 1634
            Y+DM+ KGV+PDEMFISA IDVAGH G L+AAFE+++ AR +GI+ G I+YSSLMGACCN
Sbjct: 759  YDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEARAKGINLGSISYSSLMGACCN 818

Query: 1633 ARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQLQKATNILFELKKQGVRPNTIT 1454
            A++WQKAL+LYED+K +N+K TVSMMNAL+TALC  DQ QKA  I  E+K+  + PNTIT
Sbjct: 819  AKNWQKALELYEDIKGINLKPTVSMMNALITALCYADQYQKALEIFSEMKRVDLCPNTIT 878

Query: 1453 YSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCIIGMCLRRFQKACIVGDPVLSL 1274
            YS LLVASEK DDL+VGLMLLS AKKDGVAPNLVMCRC++ MC RRFQKAC +G+PVLS 
Sbjct: 879  YSTLLVASEKKDDLDVGLMLLSHAKKDGVAPNLVMCRCLLAMCSRRFQKACTLGEPVLSN 938

Query: 1273 TPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLGCLKLPHDVNLRDRLVENLGVS 1094
              GRLQLD++WTS AL +YRE I AG+ PT EELS VLGCL+LP D ++++RL+ENLG++
Sbjct: 939  NSGRLQLDSKWTSLALMVYRETIGAGVVPTIEELSLVLGCLQLPRDASIKERLIENLGLT 998

Query: 1093 TNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAVSLKQSPIIVDVRNLQVHTAEV 914
               SKGSN+CSL+DGFGEYDPRA SLLEEAASLGIVP  S K SPI+VDVRNL +H A+V
Sbjct: 999  VETSKGSNLCSLIDGFGEYDPRACSLLEEAASLGIVPLTSFKGSPIVVDVRNLHIHAAQV 1058

Query: 913  YLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGEKTINIAGRISQAIAALLRRLG 734
            YLLTVLK LKHRLA GAK+PN+SI+LP+E++ IQTP G+KTI IAGRI++A+AALLRRL 
Sbjct: 1059 YLLTVLKSLKHRLAAGAKIPNISIVLPVEQSHIQTPTGQKTIKIAGRINRAVAALLRRLR 1118

Query: 733  LTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLGLSQRRLGKGISFQQRDIRTGN 554
            L Y GNES GKIR+NGV++K+WFQPKL+SP          SQ RL KGIS QQR IRTG+
Sbjct: 1119 LPYQGNESFGKIRINGVIMKRWFQPKLESPFSWEQTGFSFSQTRLRKGISHQQRTIRTGD 1178

Query: 553  LSL 545
            LSL
Sbjct: 1179 LSL 1181



 Score = 80.1 bits (196), Expect = 7e-12
 Identities = 51/109 (46%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
 Frame = -3

Query: 3828 MEASLSP---ITSCAAVSSFLYPRCCCVRSLRKEFL-GNGHNLRPPGLRSRRKCKNIGFQ 3661
            M++  SP   + SC+ +SS L PR        ++FL G+ H+LRPPGL SRR+C+NIGFQ
Sbjct: 1    MDSIFSPKLSLLSCSPISSSLVPR--------RQFLSGSTHSLRPPGLHSRRRCRNIGFQ 52

Query: 3660 FQVYPSKRFVLRASLDSQSIXXXXXXXXXXVFTVFYLNYSKRKTNSEEK 3514
            F    S RFVLRASLDSQ++            TV +L +SKR TN+  K
Sbjct: 53   FGGNTS-RFVLRASLDSQTV-VFASVVTISALTVVFLEFSKRNTNANAK 99


>ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Populus trichocarpa]
            gi|550341229|gb|EEE86674.2| hypothetical protein
            POPTR_0004s17400g [Populus trichocarpa]
          Length = 1104

 Score = 1075 bits (2780), Expect = 0.0
 Identities = 573/972 (58%), Positives = 697/972 (71%), Gaps = 11/972 (1%)
 Frame = -2

Query: 3427 EEEELVKEMKQINHGHESIVAEMQLVETSAARGANLATSTSELANVNMVASSVHDFLAM- 3251
            E +  V++  + +H  E     +Q  ET++  G++L     E +  N VA++V D + + 
Sbjct: 151  ESQGSVEKASENSHEFEEKETHVQFQETASLHGSSLLIKAVESSGANFVAANVCDTVVVE 210

Query: 3250 -GEXXXXXXXXXXLMQSES-DAPAYTLDRQTCQKRLEDGGQETGNDSKTQILLIEREQYS 3077
              E           + SES  A       Q  +   E  G+E    S+     +E+ + +
Sbjct: 211  ESEVGDARVSPLPSVLSESGSALPLIFATQMTELTQEKSGEEIEFGSELSGS-VEKVKSN 269

Query: 3076 ASFPEVDLQKGMDVPERSSNEVSKEDEQSCYNFIYRDNLRQDLYTFYEPLKANV---NNL 2906
            A    VD            NE  ++ E S YN     ++R+DLYTFY   ++ V   +NL
Sbjct: 270  AVLVPVD------------NESIEKAELSSYNGAISQSVREDLYTFYGANRSVVKSASNL 317

Query: 2905 GA--LPSITSFQENGRPSPFKSFTADAAKVFVRSELLHHTESREGERDLAHYQGDSFNGR 2732
            G     S  S  ++ R S  K  T    +     + L   +  +     AHY+G SF+  
Sbjct: 318  GLKETSSHASLLKSKRFSSLKMNTGLETEDLSSQQPLQAADHVQKTMPPAHYEGGSFH-- 375

Query: 2731 KDMEKGKEVPANKETKTFHQ--HRPTDSFPSHN-LKRKQIHHLSHQFGAYNRLLKDGRLG 2561
                K K +P +KE K   Q  H      PS N +  K   H   ++ AYNRLL++GRL 
Sbjct: 376  ----KSKNLPGSKERKHPIQDSHSKLRQLPSPNGIPSKVKDHPPEEYNAYNRLLREGRLA 431

Query: 2560 DCIDLLEDMENKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVC 2381
            +C+DLLEDME +GLLDMNKVYH  FF+ C+SQKAVKEAFRF KL+QNPTLSTFNMLMSVC
Sbjct: 432  ECLDLLEDMERRGLLDMNKVYHVKFFKLCRSQKAVKEAFRFCKLVQNPTLSTFNMLMSVC 491

Query: 2380 ASSQDAEGAFQVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNN 2201
            A+SQ++ GAF+VLQL +  GLK DCKLYTTLISTCAKSGKVD MFEVFHEMVNAGVEPN 
Sbjct: 492  ATSQNSAGAFEVLQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNV 551

Query: 2200 HTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGESGAVDRAFDVLAE 2021
            HTYGALIDGCA+AGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG+SGAVDRAFDVLAE
Sbjct: 552  HTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAE 611

Query: 2020 MRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQT 1841
            M  E  PIDPDH+TVGAL+KAC  AGQVDRA+EVY M+ +Y I+GTPEVYTIA+N CSQ 
Sbjct: 612  MTGEAQPIDPDHITVGALIKACTNAGQVDRAQEVYNMVHKYNIKGTPEVYTIAINSCSQI 671

Query: 1840 GDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAARKEGIHAGIIAY 1661
            GDWEFAC +Y+DMT KGV PDEMF+SA IDVAGHAG +DAAFEIIQ A+ +G   GII Y
Sbjct: 672  GDWEFACKVYDDMTRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQVAKAKGAQLGIIPY 731

Query: 1660 SSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQLQKATNILFELKK 1481
            SSLMGACCNA++WQK L+LYED+K M +K TV+ MNAL+TALCD DQL KA  +L E+K 
Sbjct: 732  SSLMGACCNAKNWQKGLELYEDIKSMKIKPTVATMNALITALCDGDQLPKALEVLSEMKA 791

Query: 1480 QGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCIIGMCLRRFQKAC 1301
             G+RPNTITYSIL VASE+ DDLE GLMLLSQAKKD VAP L+M +CII MCLR+F+ AC
Sbjct: 792  WGLRPNTITYSILSVASERKDDLEAGLMLLSQAKKDCVAPTLIMSKCIISMCLRKFENAC 851

Query: 1300 IVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLGCLKLPHDVNLRD 1121
             +G+ VLS   GR Q++N+WTS AL +YR  +AAG  PT E +SQVLGCL++P D  L++
Sbjct: 852  TLGEAVLSFNSGRAQIENKWTSVALMVYRGTMAAGEKPTIELVSQVLGCLQIPCDATLKN 911

Query: 1120 RLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAVSLKQSPIIVDVR 941
            RLVENLGV+   S+ SN+CSLVDGFGEYDPRAFSLLEEAASLGIVP VS K+SPI +D +
Sbjct: 912  RLVENLGVTAVSSRYSNLCSLVDGFGEYDPRAFSLLEEAASLGIVPCVSFKESPITMDAK 971

Query: 940  NLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGEKTINIAGRISQA 761
             LQ+H AEVY LT+LKGLKHRLA GAKLPN++ILLP+EK Q+ T +GEKTIN+AGRIS+A
Sbjct: 972  QLQIHIAEVYFLTILKGLKHRLAAGAKLPNVTILLPVEKAQVITLEGEKTINVAGRISRA 1031

Query: 760  IAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLGLSQRRLGKGISF 581
            +A+LLRRLGL Y GNES GKIR+NG+ +++W QPKLDSP    P +   S  RLGKGISF
Sbjct: 1032 VASLLRRLGLPYQGNESYGKIRINGISLRRWLQPKLDSPFSGKPGEWSTSLSRLGKGISF 1091

Query: 580  QQRDIRTGNLSL 545
            QQR+IRTG+ SL
Sbjct: 1092 QQRNIRTGDFSL 1103


>gb|EMJ00876.1| hypothetical protein PRUPE_ppa000631mg [Prunus persica]
          Length = 1060

 Score = 1051 bits (2717), Expect = 0.0
 Identities = 547/876 (62%), Positives = 670/876 (76%), Gaps = 5/876 (0%)
 Frame = -2

Query: 3157 KRLEDGGQETGNDSKTQILLIEREQYSASFPEVDLQKGMDVPERSSNEVSKEDEQSCYNF 2978
            +R EDGG++  +D  ++  L+    +  + P V +     V    S+EV    E + ++ 
Sbjct: 212  ERSEDGGRDPISDEFSK--LMSDSNFGVASPSVPVDDEESVEVGESDEVG---EATSFHV 266

Query: 2977 IYRDNLRQDLYTFYEPLKANVNNLGALPSITSFQENGR-PSPF-KSFTADAAKVFVRSEL 2804
            + R+++R++L+ FYE  K+   ++ +L        NG+ PS F ++ T   A +  ++  
Sbjct: 267  LNRESVREELHMFYESNKSETKSVASL--------NGKKPSSFLRNITVTGADLIPQASH 318

Query: 2803 LHHTESREGERDLAHYQGDSFNGRKDMEKGKEVPANKETKTFHQHRP--TDSFPS-HNLK 2633
             H TES EG              RKD+ KG    ++KE +   +        FP  H + 
Sbjct: 319  -HTTESIEGHT----------RSRKDLGKGSGYSSDKEVRHLPKKNSGTMTQFPHPHGIH 367

Query: 2632 RKQIHHLSHQFGAYNRLLKDGRLGDCIDLLEDMENKGLLDMNKVYHAGFFRACKSQKAVK 2453
                  LS Q  AY+RLLKDGRLGD + LLED+E +GLLDMNKVYHA FF  CKSQKAV 
Sbjct: 368  TNDRDLLSEQLSAYHRLLKDGRLGDSLKLLEDLERRGLLDMNKVYHARFFEICKSQKAVD 427

Query: 2452 EAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLKVDCKLYTTLISTCA 2273
            +AFRF KLI NPTLST+NMLM+VCASSQD+E AF VL+LV++AG+K DCKLYTTLISTC 
Sbjct: 428  KAFRFIKLIPNPTLSTYNMLMTVCASSQDSEEAFHVLRLVREAGMKPDCKLYTTLISTCG 487

Query: 2272 KSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRV 2093
            KSGKV TMF+VFHEMVNAGVEPN HTYGALIDGC +AG+VAKAFGAYGIMRSK VKPDRV
Sbjct: 488  KSGKVYTMFDVFHEMVNAGVEPNVHTYGALIDGCGRAGEVAKAFGAYGIMRSKKVKPDRV 547

Query: 2092 VFNALITACGESGAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYK 1913
            VFNALITACG+SGAVDRAFDVL EM AE  PI+PDH TVGAL+KACA AGQVDRAREVYK
Sbjct: 548  VFNALITACGQSGAVDRAFDVLGEMMAETQPIEPDHTTVGALIKACANAGQVDRAREVYK 607

Query: 1912 MIDEYGIRGTPEVYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAG 1733
            M+ +Y I+G+ EVYTIAVNCCSQTGDWEFAC++Y+DMT KGV PDEMF+SA IDVAGH G
Sbjct: 608  MVHKYKIKGSSEVYTIAVNCCSQTGDWEFACNVYSDMTRKGVVPDEMFLSALIDVAGHVG 667

Query: 1732 NLDAAFEIIQAARKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMN 1553
             LDAAFEI+Q AR +GI  G ++YSSLMGAC NA++W KAL+LYE +K   ++ TVS +N
Sbjct: 668  KLDAAFEILQEARNQGIQVGTVSYSSLMGACSNAKNWHKALELYEYLKSTKIEKTVSTVN 727

Query: 1552 ALLTALCDVDQLQKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKD 1373
            AL+TALCD DQLQKA  +L E+K  G+ PN+ITYSILLVASEK DDLE G MLLSQA+KD
Sbjct: 728  ALITALCDGDQLQKAMEVLSEMKGFGLHPNSITYSILLVASEKKDDLEAGHMLLSQAEKD 787

Query: 1372 GVAPNLVMCRCIIGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGL 1193
            GVAPNLVMCRCIIGMCLRR +KAC +G+PVLS    R Q+D++W S AL +YR+ I AG+
Sbjct: 788  GVAPNLVMCRCIIGMCLRRSEKACSLGEPVLS--RDRPQVDSKWASLALMVYRKTIVAGI 845

Query: 1192 APTAEELSQVLGCLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLL 1013
             PT E +SQVLGCL+LP+D + ++RL+ENLGV+   S+ SN+CSL+DGFGEYDPRAFSLL
Sbjct: 846  MPTVEVISQVLGCLQLPYDASFKNRLIENLGVTAETSRPSNLCSLIDGFGEYDPRAFSLL 905

Query: 1012 EEAASLGIVPAVSLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLP 833
            EEAASLGIVP VS K SP++VD R LQ+HTAEV++LTVLKGLKHRLA GAKLPN++ILLP
Sbjct: 906  EEAASLGIVPCVSFKASPVVVDARKLQLHTAEVFILTVLKGLKHRLAAGAKLPNMTILLP 965

Query: 832  LEKTQIQTPKGEKTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKL 653
            +EKTQI +PKG KTINIAGR+ Q++AALLRRLG+ Y GNESRGKI+++G+ +K+W QPKL
Sbjct: 966  VEKTQIMSPKG-KTINIAGRVGQSVAALLRRLGIPYQGNESRGKIKISGLAMKRWLQPKL 1024

Query: 652  DSPLIRNPADLGLSQRRLGKGISFQQRDIRTGNLSL 545
             S     P + G SQ +LGKGI+ QQR+IRTGNLSL
Sbjct: 1025 AS-FTGKPGEFGSSQLQLGKGITHQQRNIRTGNLSL 1059


>ref|XP_002534048.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223525928|gb|EEF28334.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1129

 Score = 1046 bits (2704), Expect = 0.0
 Identities = 547/887 (61%), Positives = 664/887 (74%), Gaps = 11/887 (1%)
 Frame = -2

Query: 3172 RQTCQKRLEDGGQETGNDSKTQILLIEREQYSASFPEVDLQKGMDVPERSSNEVSKEDEQ 2993
            R+  +  +E    ET  DS+   LL E+   +AS                ++E+ K+D  
Sbjct: 257  RELSELTIERSRDETEVDSELTQLLEEKSNDTAS-------------STMNDEIGKKDGI 303

Query: 2992 SCYNFIYRDNLRQDLYTFYEPLKA---NVNNLGALPSITSFQENGRPSPFKSFTADAAKV 2822
            S Y  I + + R+DLY FYE  ++   + +NL  L +++S       +   S   +   V
Sbjct: 304  SSYYDITKKSAREDLYKFYEESQSTEKSPSNLNGLDTVSSHAAPLIGNNISSLKVNG--V 361

Query: 2821 FVRSELL-----HHTESREGERDLAHYQGDSFNGRKDMEKGKEVPANKETKTFHQHRPTD 2657
               +ELL        E+ E +  LA Y+  +    + +   +  P  KE     Q   T+
Sbjct: 362  GKEAELLSPQSPQFAETVERKVHLARYERGASRKNEHIGGRRGFPREKEKGHVIQDEHTN 421

Query: 2656 --SFPSHN-LKRKQIHHLSHQFGAYNRLLKDGRLGDCIDLLEDMENKGLLDMNKVYHAGF 2486
               FP  N +      H + Q   YNRLL+DGRL +C+DLLEDME +GLLDM+K+YHA F
Sbjct: 422  LPEFPYPNGVHSTNKDHKAEQVHGYNRLLRDGRLAECVDLLEDMERRGLLDMSKIYHAKF 481

Query: 2485 FRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLKVDC 2306
            F+ CK QKAVKEAFRF KL+ NP+LSTFNMLMSVC+SSQD++GAF+VL+L Q AGLK DC
Sbjct: 482  FKICKIQKAVKEAFRFCKLVPNPSLSTFNMLMSVCSSSQDSDGAFEVLRLAQGAGLKADC 541

Query: 2305 KLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGAYGI 2126
            KLYTTLISTCAKSGKVD MFEVFHEMVNAGVEPN HTYG+LIDGCAKAGQ+AKAFGAYGI
Sbjct: 542  KLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGSLIDGCAKAGQMAKAFGAYGI 601

Query: 2125 MRSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKA 1946
            +RSKNVKPDRVVFNALITACG+SGAVDRAFDVLAEM AE HPIDPDH+TVGALMKACAKA
Sbjct: 602  LRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAETHPIDPDHITVGALMKACAKA 661

Query: 1945 GQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFI 1766
            GQVDRA+EVY M+ +Y I+GTPEVYTIAVN CSQTGDWEFA S+Y+DMT KGV+PDEMF+
Sbjct: 662  GQVDRAKEVYNMLHKYNIKGTPEVYTIAVNFCSQTGDWEFARSVYDDMTRKGVAPDEMFL 721

Query: 1765 SAWIDVAGHAGNLDAAFEIIQAARKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKE 1586
            SA +DVAGHAG +D AFE +Q AR +G   GI+ YSSLMGAC NA++WQKAL+LYED+K 
Sbjct: 722  SALVDVAGHAGLVDIAFETLQEARTQGTQLGIVPYSSLMGACSNAKNWQKALELYEDIKA 781

Query: 1585 MNMKLTVSMMNALLTALCDVDQLQKATNILFELKKQGVRPNTITYSILLVASEKMDDLEV 1406
            + +K TVS MNAL+TALCD DQLQKA   L E+K  G+ PN +TYSILLVASE+ DDL+ 
Sbjct: 782  IKLKPTVSTMNALMTALCDGDQLQKALETLSEMKSFGLCPNIVTYSILLVASERKDDLDA 841

Query: 1405 GLMLLSQAKKDGVAPNLVMCRCIIGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFAL 1226
            G MLLSQAK+D + P  +M +CIIGMCLRR++KAC +G+ +LS   GR Q+ N+WTS AL
Sbjct: 842  GDMLLSQAKEDCITPTFLMYKCIIGMCLRRYKKACSLGESILSFDSGRPQIKNEWTSRAL 901

Query: 1225 RIYREAIAAGLAPTAEELSQVLGCLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGF 1046
             +YRE IAAG  PT E +SQVLGCL+LP D +L+ RLVENLGV+ +PSK SN+C+LVDGF
Sbjct: 902  TVYRETIAAGEKPTMEVVSQVLGCLQLPCDASLKGRLVENLGVTADPSKFSNLCALVDGF 961

Query: 1045 GEYDPRAFSLLEEAASLGIVPAVSLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGG 866
            GEYDPRAFSLLEEAASLG VP  S K+SPI++D + LQ H AEVYLLT+LKGLKHRLA G
Sbjct: 962  GEYDPRAFSLLEEAASLGTVPCASFKESPIVMDAKLLQSHIAEVYLLTILKGLKHRLAAG 1021

Query: 865  AKLPNLSILLPLEKTQIQTPKGEKTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNG 686
            AKLPN++ILLP E TQI+T KGEKTIN+AGRISQ +A+LLRRLGL Y GNES GKIR+NG
Sbjct: 1022 AKLPNITILLPTEMTQIKTLKGEKTINLAGRISQDVASLLRRLGLPYQGNESYGKIRING 1081

Query: 685  VVVKKWFQPKLDSPLIRNPADLGLSQRRLGKGISFQQRDIRTGNLSL 545
            + +++W QPKL SP    P +L  S  R+GKGI+ QQR+IRTGNLSL
Sbjct: 1082 ISLRRWLQPKLASPFSGKPEELSFSLSRIGKGITHQQRNIRTGNLSL 1128


>ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 1072

 Score = 1042 bits (2695), Expect = 0.0
 Identities = 531/796 (66%), Positives = 629/796 (79%), Gaps = 3/796 (0%)
 Frame = -2

Query: 2923 ANVNNLGALPSITSFQENGRPSPFKSFTADAAKVFVRSELLHHTESREGERDLAHYQGDS 2744
            AN+  + A+ S  S       S  K  T          E L   E  EG+  LA ++   
Sbjct: 278  ANLEFVKAISSHASPLNGYSLSSLKRDTEPKGPELSLQEALQTAEHVEGKIRLACHREGP 337

Query: 2743 FNGRKDMEKGKEVPANKETKTFHQHRPTD--SFPSHNLKRKQI-HHLSHQFGAYNRLLKD 2573
             +  K   + +  P N E     Q    +   FP  N K     H +S Q  +YNRL++ 
Sbjct: 338  SHKIKARRRIRNFPRNNERINLMQDVGKNMLQFPYPNGKHANYAHDVSEQLHSYNRLIRQ 397

Query: 2572 GRLGDCIDLLEDMENKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNML 2393
            GR+ DCIDLLEDME KGLLDM+KVYHA FF  CKSQKA+KEAFRF KL+ NPTLSTFNML
Sbjct: 398  GRISDCIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNML 457

Query: 2392 MSVCASSQDAEGAFQVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGV 2213
            MSVCASS+D+EGAFQVL+LVQ+AGLK DCKLYTTLI+TCAKSGKVD MFEVFHEMVNAG+
Sbjct: 458  MSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGI 517

Query: 2212 EPNNHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGESGAVDRAFD 2033
            EPN HTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG+SGAVDRAFD
Sbjct: 518  EPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFD 577

Query: 2032 VLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNC 1853
            VLAEM AEVHP+DPDH+T+GALMKACA AGQVDRAREVYKMI +Y I+GTPEVYTIA+NC
Sbjct: 578  VLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINC 637

Query: 1852 CSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAARKEGIHAG 1673
            CSQTGDWEFACS+Y+DMT KGV PDE+F+SA ID AGHAG ++AAFEI+Q A+ +GI  G
Sbjct: 638  CSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVG 697

Query: 1672 IIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQLQKATNILF 1493
            II+YSSLMGAC NA++WQKAL+LYE +K + +K TVS MNAL+TALCD D+L K   +L 
Sbjct: 698  IISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDRLPKTMEVLS 757

Query: 1492 ELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCIIGMCLRRF 1313
            ++K  G+ PNTITYSILLVA E+ DD+EVGLMLLSQAK+DGV PNLVM +CIIGMC RR+
Sbjct: 758  DMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRY 817

Query: 1312 QKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLGCLKLPHDV 1133
            +KA  + + VLS   GR Q++N+WTS  L +YREAI AG  PT E +S+VLGCL+LP++ 
Sbjct: 818  EKARTLNEHVLSFNSGRPQIENKWTSLVLMVYREAIVAGTIPTVEVVSKVLGCLQLPYNA 877

Query: 1132 NLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAVSLKQSPII 953
            ++R+RLVENLGVS +  K SN+CSL+DGFGEYDPRAFSLLEEAAS GIVP VS K+SP++
Sbjct: 878  DIRERLVENLGVSADALKRSNLCSLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKESPVV 937

Query: 952  VDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGEKTINIAGR 773
            VD R L++HTA+VYLLT+LKGL+HRLA GAKLPN++ILLP+EKTQI +  GEKTI+IA R
Sbjct: 938  VDARKLEIHTAKVYLLTILKGLRHRLAAGAKLPNVNILLPVEKTQIMSVGGEKTIDIAER 997

Query: 772  ISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLGLSQRRLGK 593
             +QAIAALLRRLGL Y GN S GKIR+NG+ +K+WFQPKL SP    P +  LS  +LGK
Sbjct: 998  TTQAIAALLRRLGLPYQGNGSYGKIRINGLALKRWFQPKLASPFSGKPGE--LSSLQLGK 1055

Query: 592  GISFQQRDIRTGNLSL 545
             I+ QQR+IRTGNLSL
Sbjct: 1056 FITHQQRNIRTGNLSL 1071


>ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 713

 Score = 1037 bits (2682), Expect = 0.0
 Identities = 511/704 (72%), Positives = 599/704 (85%), Gaps = 1/704 (0%)
 Frame = -2

Query: 2653 FPSHNLKRKQI-HHLSHQFGAYNRLLKDGRLGDCIDLLEDMENKGLLDMNKVYHAGFFRA 2477
            FP  N K     H +S Q  +YNRL++ GR+ DCIDLLEDME KGLLDM+KVYHA FF  
Sbjct: 11   FPYPNGKHANYAHDVSEQLHSYNRLIRQGRISDCIDLLEDMERKGLLDMDKVYHARFFNV 70

Query: 2476 CKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLKVDCKLY 2297
            CKSQKA+KEAFRF KL+ NPTLSTFNMLMSVCASS+D+EGAFQVL+LVQ+AGLK DCKLY
Sbjct: 71   CKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLY 130

Query: 2296 TTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGAYGIMRS 2117
            TTLI+TCAKSGKVD MFEVFHEMVNAG+EPN HTYGALIDGCAKAGQVAKAFGAYGIMRS
Sbjct: 131  TTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRS 190

Query: 2116 KNVKPDRVVFNALITACGESGAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQV 1937
            KNVKPDRVVFNALITACG+SGAVDRAFDVLAEM AEVHP+DPDH+T+GALMKACA AGQV
Sbjct: 191  KNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQV 250

Query: 1936 DRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAW 1757
            DRAREVYKMI +Y I+GTPEVYTIA+NCCSQTGDWEFACS+Y+DMT KGV PDE+F+SA 
Sbjct: 251  DRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSAL 310

Query: 1756 IDVAGHAGNLDAAFEIIQAARKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNM 1577
            ID AGHAG ++AAFEI+Q A+ +GI  GII+YSSLMGAC NA++WQKAL+LYE +K + +
Sbjct: 311  IDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKL 370

Query: 1576 KLTVSMMNALLTALCDVDQLQKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLM 1397
            K TVS MNAL+TALCD D+L K   +L ++K  G+ PNTITYSILLVA E+ DD+EVGLM
Sbjct: 371  KPTVSTMNALITALCDGDRLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLM 430

Query: 1396 LLSQAKKDGVAPNLVMCRCIIGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIY 1217
            LLSQAK+DGV PNLVM +CIIGMC RR++KA  + + VLS   GR Q++N+WTS  L +Y
Sbjct: 431  LLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLVLMVY 490

Query: 1216 REAIAAGLAPTAEELSQVLGCLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEY 1037
            REAI AG  PT E +S+VLGCL+LP++ ++R+RLVENLGVS +  K SN+CSL+DGFGEY
Sbjct: 491  REAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLGVSADALKRSNLCSLIDGFGEY 550

Query: 1036 DPRAFSLLEEAASLGIVPAVSLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKL 857
            DPRAFSLLEEAAS GIVP VS K+SP++VD R L++HTA+VYLLT+LKGL+HRLA GAKL
Sbjct: 551  DPRAFSLLEEAASFGIVPCVSFKESPVVVDARKLEIHTAKVYLLTILKGLRHRLAAGAKL 610

Query: 856  PNLSILLPLEKTQIQTPKGEKTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVV 677
            PN++ILLP+EKTQI +  GEKTI+IA R +QAIAALLRRLGL Y GN S GKIR+NG+ +
Sbjct: 611  PNVNILLPVEKTQIMSVGGEKTIDIAERTTQAIAALLRRLGLPYQGNGSYGKIRINGLAL 670

Query: 676  KKWFQPKLDSPLIRNPADLGLSQRRLGKGISFQQRDIRTGNLSL 545
            K+WFQPKL SP    P +  LS  +LGK I+ QQR+IRTGNLSL
Sbjct: 671  KRWFQPKLASPFSGKPGE--LSSLQLGKFITHQQRNIRTGNLSL 712


>gb|EXB36850.1| hypothetical protein L484_003235 [Morus notabilis]
          Length = 1125

 Score = 1033 bits (2672), Expect = 0.0
 Identities = 524/838 (62%), Positives = 643/838 (76%), Gaps = 9/838 (1%)
 Frame = -2

Query: 3031 ERSSNEVSKEDEQSCYNFIYRDNLRQDLYTFYEPLKANVNNLGALPSITSFQENGRPSPF 2852
            E     + +E E + YNF+  +++R++L+ FY+  K++   +G +    S   N      
Sbjct: 287  ETDKRRLGEEGEMTSYNFLLGESVRKELHMFYDENKSDEKGIGKINGHNSLSPNASAPNS 346

Query: 2851 KSFTADAAKVFVR----SELLHHTESREGERDL---AHYQGDSFNGRKDME-KGKEVPAN 2696
            K+ +A      V+    + L    ++   E  +   +H +G   +G+   + +G      
Sbjct: 347  KTVSASLRDTIVKGGEATALFPPLKADNHESKIPFSSHKEGTLRSGKNSGQGRGYSRDLI 406

Query: 2695 KETKTFHQHR-PTDSFPSHNLKRKQIHHLSHQFGAYNRLLKDGRLGDCIDLLEDMENKGL 2519
            K     + H+ P      + L  +Q HH S Q   YNRL+KDGRL D ++LLEDME +GL
Sbjct: 407  KGNLAQNNHKAPAKLTRLNGLDVEQKHHPSEQISTYNRLVKDGRLSDAVELLEDMERRGL 466

Query: 2518 LDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQ 2339
            LDMNKVYHA FF+ CK QKAV EAFR+  LI  PTLST+NMLMSVC SSQD EGAF+V+Q
Sbjct: 467  LDMNKVYHAKFFKICKFQKAVNEAFRYVNLIPYPTLSTYNMLMSVCTSSQDPEGAFKVMQ 526

Query: 2338 LVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAG 2159
            LVQ+AGLK DCKLYTTLISTCAKSGKVD+MFEVFH+MVN GVEPN HTYG+LIDGCA+AG
Sbjct: 527  LVQEAGLKADCKLYTTLISTCAKSGKVDSMFEVFHKMVNDGVEPNVHTYGSLIDGCARAG 586

Query: 2158 QVAKAFGAYGIMRSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMRAEVHPIDPDHVT 1979
            QVAKAFGAYGIMRSKNVKPDRVVFNALITACG+SGAVDRAFDVLAEM AE   IDPDH+T
Sbjct: 587  QVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMTAEPELIDPDHIT 646

Query: 1978 VGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFACSIYNDMT 1799
            VGALMKACA +GQVDRAREVYKM+ +Y ++GTPEVYTIAVN  S  GDWEFA ++Y+DMT
Sbjct: 647  VGALMKACANSGQVDRAREVYKMVHQYNLKGTPEVYTIAVNTSSHMGDWEFARNVYDDMT 706

Query: 1798 SKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAARKEGIHAGIIAYSSLMGACCNARDWQ 1619
             KGV PDEMF+SA ID AGHAG LDAAFEI+  A+  G+  G ++YSSLMGAC NA++WQ
Sbjct: 707  RKGVLPDEMFLSALIDAAGHAGKLDAAFEILSEAKNRGVKFGTVSYSSLMGACSNAKNWQ 766

Query: 1618 KALQLYEDVKEMNMKLTVSMMNALLTALCDVDQLQKATNILFELKKQGVRPNTITYSILL 1439
            KAL+LYED+K    + TVS +NAL+TALCD DQLQKA  +L E+K  G+ PN+ITYSILL
Sbjct: 767  KALELYEDLKSTKSEQTVSTVNALITALCDGDQLQKAMEVLSEMKALGLSPNSITYSILL 826

Query: 1438 VASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCIIGMCLRRFQKACIVGDPVLSLTPGRL 1259
            VASEK DDLEVGL+L SQAKKDG++PNL+M RCI+G CLRR++ A  +G+PVLS  PGR 
Sbjct: 827  VASEKKDDLEVGLVLFSQAKKDGISPNLLMSRCILGTCLRRYENASTLGEPVLSFDPGRP 886

Query: 1258 QLDNQWTSFALRIYREAIAAGLAPTAEELSQVLGCLKLPHDVNLRDRLVENLGVSTNPSK 1079
            Q+ N+WTS AL +YR+ IAAG+ PT + LSQVLGCL+LPHD +L++RL+ENL VS + S+
Sbjct: 887  QVVNKWTSSALMVYRDTIAAGVTPTIDVLSQVLGCLQLPHDPSLKNRLIENLAVSVDTSR 946

Query: 1078 GSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAVSLKQSPIIVDVRNLQVHTAEVYLLTV 899
             SN+ SL+DGFGEYDPRAFSLLEEAAS GI+  VS KQSP+IVD R LQ+HTAEVYLLTV
Sbjct: 947  PSNLSSLIDGFGEYDPRAFSLLEEAASFGIISCVSFKQSPVIVDTRELQIHTAEVYLLTV 1006

Query: 898  LKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGEKTINIAGRISQAIAALLRRLGLTYLG 719
            LKGLK+RLA GAKLP ++ILLP+EK Q+ +PK EKTIN+AGRI +A+AALLRRLGL Y G
Sbjct: 1007 LKGLKNRLAAGAKLPTITILLPVEKAQLTSPKEEKTINLAGRIGRAVAALLRRLGLPYQG 1066

Query: 718  NESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLGLSQRRLGKGISFQQRDIRTGNLSL 545
            +ES GKIR+ G+ +K+WF+PKL SP    P ++ LSQ RLGK I+ QQR+IRTGNLSL
Sbjct: 1067 HESHGKIRIYGLTLKRWFKPKLASPFSGRPEEINLSQFRLGKEIAHQQRNIRTGNLSL 1124



 Score = 59.7 bits (143), Expect = 1e-05
 Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
 Frame = -3

Query: 3837 KFAMEASLSPITSCAAVSSF--LYPRCCCVRSLRKEFLGNGHNLRPPG-LRSRRKCKNIG 3667
            +F+ +  +  + SC  +SS     P    +RS+R+EFLG GHNLRPPG LRSR + +   
Sbjct: 4    RFSAKPQILTLISCTPLSSSSSASPSRSSLRSIRREFLGCGHNLRPPGSLRSRGRQRK-- 61

Query: 3666 FQFQVYPSKRFVLRASLDSQSIXXXXXXXXXXVFTVFYLNYSKRKTNSEE 3517
              +    S RF+ RASL S  +            +V Y N+ K K N+ E
Sbjct: 62   -PWSHSRSSRFLFRASLGSHPVLVVVAVVTVSAASVVYWNFFKSKKNARE 110


>ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citrus clementina]
            gi|557525497|gb|ESR36803.1| hypothetical protein
            CICLE_v10027915mg [Citrus clementina]
          Length = 713

 Score = 1030 bits (2664), Expect = 0.0
 Identities = 509/704 (72%), Positives = 598/704 (84%), Gaps = 1/704 (0%)
 Frame = -2

Query: 2653 FPSHNLKRKQI-HHLSHQFGAYNRLLKDGRLGDCIDLLEDMENKGLLDMNKVYHAGFFRA 2477
            FP  N K     H +S Q  +YNRL++ GR+ +CIDLLEDME KGLLDM+KVYHA FF  
Sbjct: 11   FPYPNGKHANYAHDVSEQLHSYNRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNV 70

Query: 2476 CKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLKVDCKLY 2297
            CKSQKA+KEAF F KL+ NPTLSTFNMLMSVCASS+D+EGAFQVL+LVQ+AGLK DCKLY
Sbjct: 71   CKSQKAIKEAFCFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLY 130

Query: 2296 TTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGAYGIMRS 2117
            TTLI+TCAKSGKVD MFEVFHEMVNAG+EPN HTYGALIDGCAKAGQVAKAFGAYGIMRS
Sbjct: 131  TTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRS 190

Query: 2116 KNVKPDRVVFNALITACGESGAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQV 1937
            KNVKPDRVVFNALITACG+SGAVDRAFDVLAEM AEVHP+DPDH+T+GALMKACA AGQV
Sbjct: 191  KNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQV 250

Query: 1936 DRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAW 1757
            DRAREVYKMI +Y I+GTPEVYTIA+NCCSQTGDWEFACS+Y+DMT KGV PDE+F+SA 
Sbjct: 251  DRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSAL 310

Query: 1756 IDVAGHAGNLDAAFEIIQAARKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNM 1577
            ID AGHAG ++AAFEI+Q A+ +GI  GII+YSSLMGAC NA++WQKAL+LYE +K + +
Sbjct: 311  IDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKL 370

Query: 1576 KLTVSMMNALLTALCDVDQLQKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLM 1397
            K TVS MNAL+TALCD DQL K   +L ++K  G+ PNTITYSILLVA E+ DD+EVGLM
Sbjct: 371  KPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLM 430

Query: 1396 LLSQAKKDGVAPNLVMCRCIIGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIY 1217
            LLSQAK+DGV PNLVM +CIIGMC RR++KA  + + VLS   GR Q++N+WTS AL +Y
Sbjct: 431  LLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLALMVY 490

Query: 1216 REAIAAGLAPTAEELSQVLGCLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEY 1037
            REAI AG  PT E +S+VLGCL+LP++ ++R+RLVENLGVS +  K SN+CSL+DGFGEY
Sbjct: 491  REAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLGVSADALKRSNLCSLIDGFGEY 550

Query: 1036 DPRAFSLLEEAASLGIVPAVSLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKL 857
            DPRAFSLLEEAAS GIVP VS K+ P++VD R L++HTA+VYLLT+LKGL+HRLA GAKL
Sbjct: 551  DPRAFSLLEEAASFGIVPCVSFKEIPVVVDARKLEIHTAKVYLLTILKGLRHRLAAGAKL 610

Query: 856  PNLSILLPLEKTQIQTPKGEKTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVV 677
            PN++ILLP+EKTQI++  GEKTI+IA R +QAIAALLRRLGL   GN S GKIR+NG+ +
Sbjct: 611  PNVNILLPVEKTQIKSVGGEKTIDIAERTTQAIAALLRRLGLPNQGNGSYGKIRINGLAL 670

Query: 676  KKWFQPKLDSPLIRNPADLGLSQRRLGKGISFQQRDIRTGNLSL 545
            K+WFQPKL SP    P +  LS  +LGK I+ QQR+IRTGNLSL
Sbjct: 671  KRWFQPKLASPFSGKPGE--LSSLQLGKFITHQQRNIRTGNLSL 712


>ref|XP_004292148.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1028

 Score = 1028 bits (2657), Expect = 0.0
 Identities = 522/834 (62%), Positives = 641/834 (76%), Gaps = 8/834 (0%)
 Frame = -2

Query: 3022 SNEVSKEDEQSC-------YNFIYRDNLRQDLYTFYEPLKANVNNLGALPSITSFQENGR 2864
            S  VS  DE+S        + F+  +++R++++ FYE  K N   L      +SF  N  
Sbjct: 206  SPSVSGNDEESVEVGEANGFRFLNGESVREEIHMFYEAEK-NEMKLDE-KKFSSFLRNNT 263

Query: 2863 PSPFKSFTADAAKVFVRSELLHHTESREGERDLAHYQGDSFNGRKDMEKGKEVPANKETK 2684
             +   SF           ++ H   +   +  + +++      R D+  G    A+ E +
Sbjct: 264  LTRSDSF----------GQVSHQITTENVKGKMPNHKEGHVRSRGDLGNGNGYVADTELR 313

Query: 2683 TFHQHRPTDSFPSHNLKRKQIHHLSHQFGAYNRLLKDGRLGDCIDLLEDMENKGLLDMNK 2504
               +         + ++    H++S Q  AY+RLLKDGRL D + LLED+E K LLDMNK
Sbjct: 314  HLAKKNSKTVPQPNGIQTSDTHYISEQLSAYHRLLKDGRLSDSLRLLEDLEKKDLLDMNK 373

Query: 2503 VYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQLVQDA 2324
            VYH  FF  CK +KAV +AFRF KLI NPT+ST+NMLMSVCASSQD+EGAF VL LV++A
Sbjct: 374  VYHGRFFETCKKKKAVDQAFRFIKLIPNPTMSTYNMLMSVCASSQDSEGAFNVLGLVREA 433

Query: 2323 GLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAGQVAKA 2144
            GL+VDCKLYTTLISTCAKSGKV TMF+VFHEMV+AGVEPN HTYGALIDGC +AG+VAKA
Sbjct: 434  GLRVDCKLYTTLISTCAKSGKVYTMFDVFHEMVSAGVEPNVHTYGALIDGCGRAGEVAKA 493

Query: 2143 FGAYGIMRSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMRAEVHPIDPDHVTVGALM 1964
            FGAYGIMRSK VKPDRVVFNALITACG+SGAVDRAFDVL EM+AE  PI+PDH T+GAL+
Sbjct: 494  FGAYGIMRSKKVKPDRVVFNALITACGQSGAVDRAFDVLEEMKAETQPIEPDHTTIGALI 553

Query: 1963 KACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFACSIYNDMTSKGVS 1784
            KACA AGQV+RAREVYKMI +Y I+GT EVYTIAVNCCSQT DWEFAC++Y+ M   GV+
Sbjct: 554  KACANAGQVERAREVYKMIHKYKIKGTSEVYTIAVNCCSQTADWEFACTVYDYMKKNGVT 613

Query: 1783 PDEMFISAWIDVAGHAGNLDAAFEIIQAARKEGIHAGIIAYSSLMGACCNARDWQKALQL 1604
            PDE+F+SA IDVAGHAG LDAAFEIIQ A   GI  G ++YSSLMGAC NA++WQKAL+L
Sbjct: 614  PDEVFLSALIDVAGHAGKLDAAFEIIQDASNRGIQVGTVSYSSLMGACSNAKNWQKALEL 673

Query: 1603 YEDVKEMNMKLTVSMMNALLTALCDVDQLQKATNILFELKKQGVRPNTITYSILLVASEK 1424
            YED+K   ++ TVS +NAL+TALCD DQLQKA  +L E+K  G+RPN+ITYSIL+VASEK
Sbjct: 674  YEDLKSAKIEQTVSTINALITALCDGDQLQKAMEVLSEMKSIGLRPNSITYSILVVASEK 733

Query: 1423 MDDLEVGLMLLSQAKKDGVAPNLVMCRCIIGMCLRRFQKACIVGDPVLSLTPGRLQLDNQ 1244
             DDLE GLMLLSQA+ D V PNLVMCRCIIGMCLRR +KAC +G+PVL L  GR Q+D++
Sbjct: 734  KDDLEAGLMLLSQAEMDKVVPNLVMCRCIIGMCLRRSEKACTLGEPVLPLDSGRPQVDSK 793

Query: 1243 WTSFALRIYREAIAAGLAPTAEELSQVLGCLKLPHDVNLRDRLVENLGVSTNPSKGSNIC 1064
            W+S AL +YR+ I AG  PT E +SQVLGCL+LP+D   ++R++ENLGV+ + S+ S +C
Sbjct: 794  WSSVALMVYRKTIVAGTTPTIEIISQVLGCLQLPYDAASKNRVIENLGVTADMSRASKLC 853

Query: 1063 SLVDGFGEYDPRAFSLLEEAASLGIVPAVSLKQSPIIVDVRNLQVHTAEVYLLTVLKGLK 884
            SL+DGFGEYDPRAFSLLEEAASLGIVP VS K SPI+VD + LQ+HTAEVY+LTVL+GLK
Sbjct: 854  SLIDGFGEYDPRAFSLLEEAASLGIVPCVSFKASPIVVDAKKLQLHTAEVYILTVLRGLK 913

Query: 883  HRLAGGAKLPNLSILLPLEKTQIQTPKGE-KTINIAGRISQAIAALLRRLGLTYLGNESR 707
            HRLA GAKLPN++ILLP+EKTQI +PKG+ KTIN++GR+ Q++A+LLRRLG+ Y GNESR
Sbjct: 914  HRLAAGAKLPNMTILLPVEKTQILSPKGKLKTINLSGRVGQSVASLLRRLGIDYQGNESR 973

Query: 706  GKIRVNGVVVKKWFQPKLDSPLIRNPADLGLSQRRLGKGISFQQRDIRTGNLSL 545
            GKIR++G+ +K+WFQPKL SP     A+LG SQ RLGKGI  QQR+IRTGNLSL
Sbjct: 974  GKIRISGLTLKRWFQPKLASPFTGKLAELGSSQLRLGKGIMHQQRNIRTGNLSL 1027


>ref|XP_004147063.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Cucumis sativus]
          Length = 1108

 Score =  998 bits (2580), Expect = 0.0
 Identities = 506/830 (60%), Positives = 629/830 (75%), Gaps = 2/830 (0%)
 Frame = -2

Query: 3028 RSSNEVSKEDEQSCYNFIYRDNLRQDLYTFYEPLKANVNNLGALPSITSFQENGRPSPFK 2849
            +   E+ KE++ +  NF   +  R+D+Y FYE  K++  N     S TS   N + S   
Sbjct: 280  KEDGELLKEEKFNSSNFQIEEPAREDIYMFYEDTKSS--NQTETSSRTSHLYNQKFSSLM 337

Query: 2848 -SFTADAAKVFVRSELLHHTESREGERDLAHYQGDSFNGRKDMEKGKEVPANKETKTFHQ 2672
             +  +  A++ +   L      +    D+ + +G S N +K           ++  + H+
Sbjct: 338  VNGVSRVAELVLEDSLPVAGYVQREVPDVRYKEGSSGNRKKSGGNNISRHGERKEPSLHK 397

Query: 2671 HRPTDSFPSHNLKRKQIHHLS-HQFGAYNRLLKDGRLGDCIDLLEDMENKGLLDMNKVYH 2495
             +  +  P  N K     +L   Q+ +YN+ LK GRL DCI +L+DME +G+LDMNK+YH
Sbjct: 398  GKVVNGLPHPNGKHVHYKNLDVDQYKSYNQCLKGGRLHDCIRILQDMEKEGILDMNKIYH 457

Query: 2494 AGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLK 2315
              FF  CKS+KAV+EAF++T LIQNPTLSTFNMLMSVCASSQD+E AFQV++LVQ+AG+K
Sbjct: 458  GKFFNICKSKKAVQEAFQYTALIQNPTLSTFNMLMSVCASSQDSERAFQVVRLVQEAGMK 517

Query: 2314 VDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGA 2135
             DCKLYTTLISTC KSGKVD MFEVFH MVNAGVEPN HTYGALIDGCA+A QVAKAFG 
Sbjct: 518  ADCKLYTTLISTCGKSGKVDAMFEVFHRMVNAGVEPNVHTYGALIDGCARAAQVAKAFGV 577

Query: 2134 YGIMRSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKAC 1955
            YGIMRSKNVKPDRVVFNALITACG+SGAVDRAFDVLAEM AE+HPI+PDH+T+GALMKAC
Sbjct: 578  YGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALMKAC 637

Query: 1954 AKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDE 1775
            A AGQVDRAREVYKMI +Y I+GTPEVYTIAVNCCSQ+ DW+FA +IY DMT KGV PDE
Sbjct: 638  ANAGQVDRAREVYKMIHDYKIKGTPEVYTIAVNCCSQSCDWDFASNIYQDMTRKGVQPDE 697

Query: 1774 MFISAWIDVAGHAGNLDAAFEIIQAARKEGIHAGIIAYSSLMGACCNARDWQKALQLYED 1595
            +F+SA IDVAGHAG LDAAFE++  A+  GI  GI++YSSLMGAC NA++WQKAL LYED
Sbjct: 698  IFLSALIDVAGHAGKLDAAFEVLGEAKTLGIRVGIVSYSSLMGACSNAKNWQKALALYED 757

Query: 1594 VKEMNMKLTVSMMNALLTALCDVDQLQKATNILFELKKQGVRPNTITYSILLVASEKMDD 1415
            +K M ++LTVS +NAL+TAL D +QLQ A +IL E+K+ G+ PN ITYSIL  AS++ +D
Sbjct: 758  LKSMKLRLTVSTVNALITALSDGEQLQMAMDILTEMKELGLSPNNITYSILTAASDRNND 817

Query: 1414 LEVGLMLLSQAKKDGVAPNLVMCRCIIGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTS 1235
            LE+ LMLLSQAK+DG+ P L M RCIIGMCLRR      +  P++SL     Q+D++WT+
Sbjct: 818  LEIALMLLSQAKEDGIVPTLTMYRCIIGMCLRRIADPSSLDRPLMSLDSTLPQVDSKWTA 877

Query: 1234 FALRIYREAIAAGLAPTAEELSQVLGCLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLV 1055
             AL++YRE I AG+ P+ + LSQVLGCL++PHD  L+ RL+EN+GVS + S+ S++CSL+
Sbjct: 878  QALKVYREIIEAGIVPSIDVLSQVLGCLQIPHDPALKSRLIENIGVSADSSRSSSLCSLI 937

Query: 1054 DGFGEYDPRAFSLLEEAASLGIVPAVSLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRL 875
            DGFGEYDPRAFSL EEAASLG+ P VSLK +PI+VD + LQ+HTAEVYLLTVLKGLKHRL
Sbjct: 938  DGFGEYDPRAFSLFEEAASLGVAPFVSLKGNPIVVDAKELQIHTAEVYLLTVLKGLKHRL 997

Query: 874  AGGAKLPNLSILLPLEKTQIQTPKGEKTINIAGRISQAIAALLRRLGLTYLGNESRGKIR 695
            A G++LPN+ ILL  E T+I   KGE+TIN++GR+ QA+AALLRRLGL Y GNES GKIR
Sbjct: 998  AAGSRLPNIMILLSNETTEILFSKGERTINLSGRVGQAVAALLRRLGLPYQGNESSGKIR 1057

Query: 694  VNGVVVKKWFQPKLDSPLIRNPADLGLSQRRLGKGISFQQRDIRTGNLSL 545
            +NG+ +++W QPKL   L   P + G  Q RL KGIS QQRDIR GNLSL
Sbjct: 1058 INGLALRRWLQPKLSDSLSGKPGEFGTFQSRLRKGISHQQRDIRIGNLSL 1107



 Score = 61.6 bits (148), Expect = 3e-06
 Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
 Frame = -3

Query: 3819 SLSPITSCAAVSSFLYPRCCCVRSLRKEFLGNGHNLRPP-GLRSRRKCKNIGFQFQVYPS 3643
            + +P     + SSF Y R   +R +R++FLG+ HNLRPP  LRSRR+C+N+G   Q   S
Sbjct: 13   TFNPCLPLNSPSSFSYSR---LRFVRRQFLGSSHNLRPPDALRSRRRCRNLGLFVQ---S 66

Query: 3642 KRFVLRASLDSQSIXXXXXXXXXXVFTVF------YLNYSKRKTNSEEK 3514
             R +LRA+  S  +              F      Y+N ++RK N+ E+
Sbjct: 67   PRCILRATFSSNPVLIVVAVVTFSAVVTFSAVSFIYMNLNRRKKNAVER 115


>ref|XP_006587670.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like [Glycine max]
          Length = 1150

 Score =  991 bits (2562), Expect = 0.0
 Identities = 522/911 (57%), Positives = 650/911 (71%), Gaps = 41/911 (4%)
 Frame = -2

Query: 3154 RLEDGGQETGNDSKTQILLIEREQYSASFPEVDLQKGMDVPERSSNEVSKEDEQSCYNFI 2975
            ++E+   +  +D +  + ++E E  ++S    +    +D   +   E+   D     + +
Sbjct: 252  QVEESQDKVDSDDELPLNMVESEHTASSVSVNNALTTVDEHTKEKIELGAIDN----DIL 307

Query: 2974 YRDNLRQDLYTFYEPLKANVNNLGALPSITSFQENGRPSPFKSFT--ADAAKVFVRSEL- 2804
            + +++R+ LY FYE  K    ++  L S+ S       SP  SF      A V     L 
Sbjct: 308  FGESVREGLYMFYEVNKPATRSMTPLSSLKSL------SPRASFMNKKGLASVMGNGALK 361

Query: 2803 ---------LHHTESREGERDLAHYQGDSF-------NGRK------DMEKGKE------ 2708
                     L   E  +G   ++ +  + +       N RK      +ME+         
Sbjct: 362  GSGLSTDIPLQSAEHVKGAVKISSHNKEGYPPQHVSKNLRKGGISLREMERNSMDHNSKI 421

Query: 2707 -VPANKETKTFHQHRPTDSFPSHNLKRKQIHHLSHQFGAYNRLLKDGRLGDCIDLLEDME 2531
             +P N  +   H  +    F  H+  +     L      YN LLK  RL +C++LL+DME
Sbjct: 422  FLPLNAHSINVHVDQTNGQFRVHDGPKMDPSEL---LSKYNNLLKVERLHECVELLKDME 478

Query: 2530 NKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAF 2351
             KGLLDM KVYHA FF  CK +KAVKEAF F +LI NP LSTFNMLMSVCASSQD+EGAF
Sbjct: 479  TKGLLDMTKVYHAKFFNICKKRKAVKEAFDFIRLIPNPMLSTFNMLMSVCASSQDSEGAF 538

Query: 2350 QVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGC 2171
            QVLQL++DA L+ DCKLYTTLI TCAKSGKVD MFEVFH+MVN+GVEPN HTYGALIDGC
Sbjct: 539  QVLQLLKDARLEPDCKLYTTLILTCAKSGKVDLMFEVFHKMVNSGVEPNVHTYGALIDGC 598

Query: 2170 AKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMRAEVHPIDP 1991
            A+AGQVAKAFGAYGIMRSKNVKPDRVVFNALI AC +SGA+DRAFDVLAEM AE  PIDP
Sbjct: 599  ARAGQVAKAFGAYGIMRSKNVKPDRVVFNALIAACAQSGALDRAFDVLAEMTAETQPIDP 658

Query: 1990 DHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFACSIY 1811
            DHVT+GAL+KAC KAGQV+RA+EVYKM+ +Y I+G PEVYTIA+N CSQTGDWEFA ++Y
Sbjct: 659  DHVTIGALLKACTKAGQVERAKEVYKMVQKYNIKGCPEVYTIAINSCSQTGDWEFAHTVY 718

Query: 1810 NDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAARKEGIHAGIIAYSSLMGACCNA 1631
            NDMT KG+ PDE+F+SA IDVAGHA  LDAAF+++Q ARK GI  GI++YSSLMGAC NA
Sbjct: 719  NDMTQKGILPDEIFLSALIDVAGHAKKLDAAFDVLQEARKGGILIGIMSYSSLMGACSNA 778

Query: 1630 RDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQLQKATNILFELKKQGVRPNTITY 1451
            R+WQKAL+LYE +K + + +TVS +NALLTALCD DQ QKA  +LFE+K  G+RPN+IT+
Sbjct: 779  RNWQKALELYEYLKSLKLTITVSTVNALLTALCDGDQFQKALEVLFEMKGLGLRPNSITF 838

Query: 1450 SILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCIIGMCLRRFQKACIVGDPVLSLT 1271
            SIL+VASEK DD+E   MLLS AKKDGV PNL+MCRCIIGMC RRF+KAC VG+PVLS  
Sbjct: 839  SILIVASEKKDDMEAAQMLLSLAKKDGVVPNLIMCRCIIGMCQRRFEKACFVGEPVLSFD 898

Query: 1270 PGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLGCLKLPHDVNLRDRLVENLGVST 1091
             GR Q+DN+WTS AL +YRE I AG  PT+E LSQ+LGCL+LP+D ++++RLVENLGVS 
Sbjct: 899  SGRPQVDNKWTSLALMVYRETIEAGEKPTSEILSQILGCLQLPYDTSVKNRLVENLGVSM 958

Query: 1090 NPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAVSLKQSPIIVDVRNLQVHTAEVY 911
              S+ SN+CSL+DGFGEYDPRAFS+LEE+AS G+VP+VSLK SP+++D + L   TAEVY
Sbjct: 959  ETSRSSNLCSLMDGFGEYDPRAFSILEESASHGVVPSVSLKVSPVVIDAKELNASTAEVY 1018

Query: 910  LLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGEKTINIAGRISQAIAALLRRLGL 731
            L+TVLKGLKHRLA GA+LPN+ ILLP+EKT++ +PK +K IN+ GR  QA+ ALLRRL +
Sbjct: 1019 LITVLKGLKHRLAAGARLPNIIILLPVEKTEVVSPKWKKNINLGGRAGQAVGALLRRLQI 1078

Query: 730  TYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRN---------PADLGLSQRRLGKGISFQ 578
             + G+ES GK+R+ G+ +KKWFQPKL  P   N         P D   S  RLGK IS Q
Sbjct: 1079 PHQGSESNGKLRIGGLALKKWFQPKLAYPFSVNMGSPTFSGKPGDWNSSLSRLGKSISNQ 1138

Query: 577  QRDIRTGNLSL 545
            QR+IRTGNLSL
Sbjct: 1139 QRNIRTGNLSL 1149


>ref|XP_004505826.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Cicer arietinum]
          Length = 1113

 Score =  988 bits (2555), Expect = 0.0
 Identities = 536/976 (54%), Positives = 668/976 (68%), Gaps = 27/976 (2%)
 Frame = -2

Query: 3391 NHGHESIVAEMQLVETSAARGANLATSTSELANVNMVASSVHDFLAMGEXXXXXXXXXXL 3212
            NH  E     +Q +++S  +   L T T + ++ +++ SSV+D                 
Sbjct: 152  NHVFEDQEVHLQFLQSSMVQETALKTQTIDSSS-SVLDSSVND---NSSEVLEEPFLSVT 207

Query: 3211 MQSESDAPAYTLDRQTCQKRLEDGGQETGNDSKTQILLIEREQYSASFPEVDLQKGMD-V 3035
             QS S  P    +  T Q  + +      +D +  + +++ E  ++S   VD+   +  +
Sbjct: 208  FQSGSLEPIAFAEEMTLQ--VVENQDVVDSDLELPLSMVKPEHDASS---VDVDNALSTI 262

Query: 3034 PERSSNEVSKEDEQSCYNFIYRDNLRQDLYTFYE----------PLKAN---------VN 2912
             E +  ++     +S    ++ +++R+ LY FYE          PL +N          N
Sbjct: 263  NEHTKEKIELRAIKS--GVLFGESVREGLYMFYEDKNSASGSMKPLSSNESLSTGASFAN 320

Query: 2911 NLGALPSITSFQENG-RPSPFKS-----FTADAAKVFVRSELLHHTESREGERDLAHYQG 2750
            + G   +I +   NG R S   S     F   A K+    E        +  R    Y  
Sbjct: 321  SKGFPSAIGNTSVNGLRLSTDISQRNAEFVEGAVKISSHREGFPRQHVSKNLRKAGRYLR 380

Query: 2749 DSFNGRKDMEKGKEVPANKETKTFHQHRPTDSFPSHN-LKRKQIHHLSHQFGAYNRLLKD 2573
            D      D    K +P +  +   H  +  D    H+  K     HLS     Y+ LLK 
Sbjct: 381  DRERNYMDHNSNKVLPQSSHSVRVHVDQKKDKIRVHDGQKIDPSKHLSK----YSYLLKA 436

Query: 2572 GRLGDCIDLLEDMENKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNML 2393
            GRL +C++LL+DME KGLLDM K YHA FF  CK QKAVKEAF + +LI NPTLSTFNML
Sbjct: 437  GRLRECVELLKDMEMKGLLDMTKAYHAKFFNICKKQKAVKEAFDYIRLIPNPTLSTFNML 496

Query: 2392 MSVCASSQDAEGAFQVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGV 2213
            MSVC SSQD+EGAFQV+QL++DA    DCKLYTTLISTCAK+GKVD MFEVFH MVN+GV
Sbjct: 497  MSVCTSSQDSEGAFQVMQLLKDAQQDPDCKLYTTLISTCAKTGKVDLMFEVFHTMVNSGV 556

Query: 2212 EPNNHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGESGAVDRAFD 2033
            EPN HTYGALIDGCA+AGQVAKAFG YGIMRSKNVKPDRVVFNALI AC +SGA+ RAFD
Sbjct: 557  EPNVHTYGALIDGCARAGQVAKAFGVYGIMRSKNVKPDRVVFNALIAACAQSGAMARAFD 616

Query: 2032 VLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNC 1853
            V+AEM AE+ PI+PDHVT G LMKACAKAGQV+RAREVYKMI +Y I+G+ EVYTIA+N 
Sbjct: 617  VVAEMEAEIQPIEPDHVTFGTLMKACAKAGQVERAREVYKMIQQYNIKGSSEVYTIAINS 676

Query: 1852 CSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAARKEGIHAG 1673
            CSQTGDWEFA S+Y+DMT KGV PDEMF+SA IDVAGHA NL+AAF+I+Q ARK GI  G
Sbjct: 677  CSQTGDWEFARSVYDDMTQKGVLPDEMFLSALIDVAGHAQNLEAAFDILQQARKGGIQIG 736

Query: 1672 IIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQLQKATNILF 1493
            ++ YSSLMGAC  AR+WQKAL+LYE +K + +  TVS +NALLTALCD DQ QKA  +L 
Sbjct: 737  MMTYSSLMGACSKARNWQKALELYEHLKSLKLVQTVSTVNALLTALCDGDQFQKALEVLS 796

Query: 1492 ELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCIIGMCLRRF 1313
            E+K  G+RPN+IT+SIL+VASEK DD+E   ML SQAKKDG  P L+MCRCIIGMCLRRF
Sbjct: 797  EMKGLGLRPNSITFSILIVASEKKDDMEAAQMLFSQAKKDGAPPTLIMCRCIIGMCLRRF 856

Query: 1312 QKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLGCLKLPHDV 1133
            +KAC+VG+PVLS   GR Q++N+WTS AL +YRE I AG  PT+E LSQ+LGC+K P+D 
Sbjct: 857  EKACLVGEPVLSFDSGRPQVNNEWTSLALTVYRETIGAGEKPTSELLSQILGCMKFPYDT 916

Query: 1132 NLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAVSLKQSPII 953
             L++RLVENLGVS+  S+ SN+CSL+DGFGEYDPR FS+LEEAAS G+VP+VS K +PI+
Sbjct: 917  YLKNRLVENLGVSSETSRNSNLCSLIDGFGEYDPRVFSILEEAASYGVVPSVSFKVNPIV 976

Query: 952  VDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGEKTINIAGR 773
            +D + L   TAEVYLLTVLKGLKHRLA GA+LPNL ILLP+E+T++ +P GEK I +A R
Sbjct: 977  IDAKELHAFTAEVYLLTVLKGLKHRLAAGARLPNLIILLPVEETKVSSPNGEKIIILAER 1036

Query: 772  ISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLGLSQRRLGK 593
              QA+AAL RRL + Y GNES GK+R+N + + KWFQPKL SP    P D   S+ RLGK
Sbjct: 1037 AGQAVAALFRRLHIPYQGNESNGKLRINSLGLIKWFQPKLASPFSGLPGDWSSSESRLGK 1096

Query: 592  GISFQQRDIRTGNLSL 545
             IS QQR+IRTGNLSL
Sbjct: 1097 NISHQQRNIRTGNLSL 1112


>ref|XP_006592076.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like [Glycine max]
          Length = 1127

 Score =  976 bits (2524), Expect = 0.0
 Identities = 510/903 (56%), Positives = 643/903 (71%), Gaps = 33/903 (3%)
 Frame = -2

Query: 3154 RLEDGGQETGNDSKTQILLIEREQYSASFPEVDLQKGMDVPERSSNEVSKEDEQSCYNFI 2975
            ++E+   +  +D +  + ++E E  ++S    +    +D   +   E+   ++    + +
Sbjct: 232  QVEESQDKVDSDDELPLNMVEPEHSASSVSVNNALTTVDGHTKEKIELGAVND----DVL 287

Query: 2974 YRDNLRQDLYTFYEPLKANVNNLGALPSITSFQ-------ENGRPSPFKSFTADAAKVFV 2816
            + + +R+ LY FYE  K    ++  L S+ S         + G PS   +     + +  
Sbjct: 288  FGEPVREGLYMFYEVNKPATGSMTPLSSLKSLSPRASFRNKKGLPSVMGNGALKGSGLST 347

Query: 2815 RSELLHHTESREGERDLAHYQGD------SFNGRK-----------DMEKGKEVPANKET 2687
               L    E  +G   ++ ++G       S N RK           D    K  P N   
Sbjct: 348  DIPL-QSAEHVKGAVKISSHKGGYPPQHVSKNLRKGVISLRERESMDHNGNKVFPLNAHA 406

Query: 2686 KTFHQHRPTDSFPSHNLKRKQIHHLSHQFGAYNRLLKDGRLGDCIDLLEDMENKGLLDMN 2507
               H  +    F  H+  +     L      YN LLK  RL +C++LL+DME KGLLDM+
Sbjct: 407  TKVHVDQTNGQFRVHDGHKMDSSEL---LSKYNNLLKVERLHECVELLKDMETKGLLDMS 463

Query: 2506 KVYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQLVQD 2327
            KVYHA FF  CK +KAVKEAF F +LI NP LSTFNMLMSVCASSQD+EGAFQVLQL++D
Sbjct: 464  KVYHAKFFNICKKRKAVKEAFDFIRLIPNPMLSTFNMLMSVCASSQDSEGAFQVLQLLKD 523

Query: 2326 AGLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAGQVAK 2147
            A L+ DCKLYTTLI TCAKSGKVD MFEVFH+MVN+GVEPN HTYGALI GCA+AGQVAK
Sbjct: 524  ARLEPDCKLYTTLILTCAKSGKVDLMFEVFHKMVNSGVEPNVHTYGALIGGCARAGQVAK 583

Query: 2146 AFGAYGIMRSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMRAEVHPIDPDHVTVGAL 1967
            AFGAYGIMRSKNVKPDRVVFNALI AC +SGAVDRAFDVLAEM AE  PIDPDHVT+GAL
Sbjct: 584  AFGAYGIMRSKNVKPDRVVFNALIAACAQSGAVDRAFDVLAEMAAETQPIDPDHVTIGAL 643

Query: 1966 MKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFACSIYNDMTSKGV 1787
            +KAC KAGQV+RA+EVYKM+ +Y I+G PEVYTIA+N CSQTGDWE+A ++YNDMT KG+
Sbjct: 644  LKACTKAGQVERAQEVYKMVQKYNIKGCPEVYTIAINSCSQTGDWEYARTVYNDMTQKGI 703

Query: 1786 SPDEMFISAWIDVAGHAGNLDAAFEIIQAARKEGIHAGIIAYSSLMGACCNARDWQKALQ 1607
             PDE+F+SA IDVAGHA  LDAAF+++Q A K GI  GI++YSSLMGAC NAR+WQKAL+
Sbjct: 704  LPDEIFLSALIDVAGHAKKLDAAFDVLQEAHKGGIQIGIMSYSSLMGACSNARNWQKALE 763

Query: 1606 LYEDVKEMNMKLTVSMMNALLTALCDVDQLQKATNILFELKKQGVRPNTITYSILLVASE 1427
            LYE +K + + +TVS +NALLTALCD DQ QKA  +LFE+K  G+ PN+IT+SIL+VASE
Sbjct: 764  LYEYLKSLKLTITVSTVNALLTALCDGDQFQKALEVLFEMKGLGLSPNSITFSILIVASE 823

Query: 1426 KMDDLEVGLMLLSQAKKDGVAPNLVMCRCIIGMCLRRFQKACIVGDPVLSLTPGRLQLDN 1247
            K DD+E   M+LS AKKDGVAPNL+MCRCIIGMC RR++KAC VG+PVLS   GR  +DN
Sbjct: 824  KKDDMEAAQMILSLAKKDGVAPNLIMCRCIIGMCQRRYEKACFVGEPVLSFDSGRPLVDN 883

Query: 1246 QWTSFALRIYREAIAAGLAPTAEELSQVLGCLKLPHDVNLRDRLVENLGVSTNPSKGSNI 1067
            +WTS AL +YRE I AG  PT+E L Q+LGCL+LP+D ++++RLVENLGV    S+ SN+
Sbjct: 884  KWTSLALMVYRETIEAGGKPTSEILPQILGCLQLPYDTSVKNRLVENLGVRAETSRSSNL 943

Query: 1066 CSLVDGFGEYDPRAFSLLEEAASLGIVPAVSLKQSPIIVDVRNLQVHTAEVYLLTVLKGL 887
            CSL+DGFGEYDPRAFS+LEE+AS G+VP+VS K SPI++D + L   TAEVY++TVLKGL
Sbjct: 944  CSLMDGFGEYDPRAFSILEESASHGVVPSVSFKVSPIVIDAKELHASTAEVYIITVLKGL 1003

Query: 886  KHRLAGGAKLPNLSILLPLEKTQIQTPKGEKTINIAGRISQAIAALLRRLGLTYLGNESR 707
            K+RLA GA+LPN+ ILLP+E+T++ +PKG+K IN+ GR  QA+ ALLRRL + + G+ES 
Sbjct: 1004 KYRLAAGARLPNIIILLPVEETEVVSPKGKKIINLGGRAGQAVGALLRRLQIPHQGSESN 1063

Query: 706  GKIRVNGVVVKKWFQPKLDSPLIRN---------PADLGLSQRRLGKGISFQQRDIRTGN 554
            GK+R+ G+ +KKWFQPKL SP   N         P D   S  RLGK IS QQR+IR GN
Sbjct: 1064 GKLRIGGLALKKWFQPKLASPFSVNMGSPTFSGKPGDWNSSLSRLGKNISNQQRNIRIGN 1123

Query: 553  LSL 545
            LSL
Sbjct: 1124 LSL 1126


>ref|XP_003607170.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355508225|gb|AES89367.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1173

 Score =  952 bits (2462), Expect = 0.0
 Identities = 509/878 (57%), Positives = 617/878 (70%), Gaps = 65/878 (7%)
 Frame = -2

Query: 2983 NFIYRDNLRQDLYTFYEPLKANVNNLGALPSI------TSFQENGR-PSPFKSFTAD--- 2834
            N I+ +++R+ LY FY+       ++  L SI      TSF  +    S  ++ + D   
Sbjct: 300  NVIFGESVREGLYMFYDDNNLASESMTPLSSIKSLSPSTSFVNSTELSSAIRNISLDGLG 359

Query: 2833 ---------------AAKVFVRSELLHHTESREGERDLAHYQGDSFNGRKDMEKGKEVPA 2699
                           AAK+    E      + +  R  + Y  D      D      +P 
Sbjct: 360  LSADISLQNAEYVEGAAKISSPKEGYPPQHTSKKLRKSSRYVRDMERNYMDHNNNNVLPQ 419

Query: 2698 NKETKTFHQHRPTDSFPSHN-LKRKQIHHLSHQFGAYNRLLKDGR--------------- 2567
            +   +  H  +  D    H+ LK     HLS     YN LLK GR               
Sbjct: 420  SSHVRV-HVDQRNDQIRVHDGLKVDPSKHLSK----YNNLLKAGRYPNEPNLLRMKQCCQ 474

Query: 2566 ------------------------LGDCIDLLEDMENKGLLDMNKVYHAGFFRACKSQKA 2459
                                    L +C++LL+DME KGLLDM KVYHA FF  CK QKA
Sbjct: 475  TPPFISYTNLKLEKLILKYIDFVRLCECVELLKDMEMKGLLDMTKVYHAKFFNICKKQKA 534

Query: 2458 VKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLKVDCKLYTTLIST 2279
            V EAF + +LI NPTLSTFNMLMSVCASSQD+EGAFQV+QL++DA L  DCKLYTTLIST
Sbjct: 535  VNEAFDYVRLIPNPTLSTFNMLMSVCASSQDSEGAFQVIQLLKDARLDPDCKLYTTLIST 594

Query: 2278 CAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPD 2099
            C K GKVD MFEVFH+MVN+GVEPN HTYGALIDGCA+AGQVAKAFGAYGIMRSKNVK D
Sbjct: 595  CGKCGKVDLMFEVFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKAD 654

Query: 2098 RVVFNALITACGESGAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREV 1919
            RVVFNALI AC +SGA+ RAFDV+AEM AE+ PI PDHVT G LMKACAKAGQV+RAREV
Sbjct: 655  RVVFNALIAACAQSGAMARAFDVIAEMEAEIQPIVPDHVTFGTLMKACAKAGQVERAREV 714

Query: 1918 YKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGH 1739
            YKMI +Y I+G+ EVYTIA+N CSQTGDWEFA S+Y+DMT KGV PDEMF+SA IDVAGH
Sbjct: 715  YKMIQQYNIKGSSEVYTIAINSCSQTGDWEFARSVYDDMTQKGVLPDEMFMSALIDVAGH 774

Query: 1738 AGNLDAAFEIIQAARKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSM 1559
            A  L+AAF+I+Q ARKEG+  GI+ YSSLMGAC  A++WQ+AL+LYE +K + +  TVS 
Sbjct: 775  AKKLEAAFDILQQARKEGVQIGIMTYSSLMGACSKAKNWQRALELYEYLKSLKLVQTVST 834

Query: 1558 MNALLTALCDVDQLQKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAK 1379
            +NALLTALCD DQ QKA  +L E+K  G+ PN+IT+SIL+VASEK DD+E   MLLSQAK
Sbjct: 835  VNALLTALCDGDQFQKALEVLSEMKGLGLCPNSITFSILIVASEKKDDMEAAQMLLSQAK 894

Query: 1378 KDGVAPNLVMCRCIIGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAA 1199
            KDG AP L+MCRCIIGMCLRRF+KAC+VG+ VLS   GR Q++N+WTS AL +YRE I A
Sbjct: 895  KDGAAPTLIMCRCIIGMCLRRFEKACLVGETVLSFDSGRPQVNNEWTSLALMVYRETIGA 954

Query: 1198 GLAPTAEELSQVLGCLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFS 1019
            G  PT++ LSQVLGCLK P+D  +R+RLVENLGV+   SK SN+CSL+DGFGEYDPRAFS
Sbjct: 955  GEKPTSQILSQVLGCLKFPYDTYVRNRLVENLGVTAESSKTSNLCSLIDGFGEYDPRAFS 1014

Query: 1018 LLEEAASLGIVPAVSLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSIL 839
            +LEEAAS G+VP+VSLK +PI++D + L   TAEVYLLT+LKGLKHRLA GAKLPN+ IL
Sbjct: 1015 ILEEAASYGVVPSVSLKMNPIVIDAKELDAFTAEVYLLTILKGLKHRLAAGAKLPNIIIL 1074

Query: 838  LPLEKTQIQTPKGEKTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQP 659
            LP+E+T++ +P+GEKTI +A R  QA+AAL RRL + Y G+ES GK+R+N + + KW+QP
Sbjct: 1075 LPVEETKLLSPEGEKTIILAERGGQAVAALFRRLHIPYQGSESNGKLRINSLGLIKWYQP 1134

Query: 658  KLDSPLIRNPADLGLSQRRLGKGISFQQRDIRTGNLSL 545
            KL SP      D   +Q RLGK IS QQR+IRTGNLSL
Sbjct: 1135 KLASPFGGFQGDWSSTQLRLGKNISNQQRNIRTGNLSL 1172


>ref|NP_195209.2| pentatricopeptide repeat protein MRL1 [Arabidopsis thaliana]
            gi|223635623|sp|Q0WLC6.2|PP349_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein MRL1,
            chloroplastic; AltName: Full=Protein MATURATION OF RBCL
            1; Short=AtMRL1; Flags: Precursor
            gi|332661026|gb|AEE86426.1| pentatricopeptide repeat
            protein MRL1 [Arabidopsis thaliana]
          Length = 1089

 Score =  948 bits (2450), Expect = 0.0
 Identities = 480/817 (58%), Positives = 609/817 (74%), Gaps = 6/817 (0%)
 Frame = -2

Query: 2977 IYRDNLRQDLYTFY--EPLKANVNNLGALPSITSFQENGRPSPFKSFTADAA--KVFVRS 2810
            I+ ++ R++++TFY      A  + L +L +++    +   S F     +      F   
Sbjct: 274  IFAESKREEIHTFYGSNHSSAKSSRLPSLKAVSPAVTSATNSLFLDHKNNGVIDTQFPGQ 333

Query: 2809 ELLHHTESREGERDLAHYQGDSFNGRKDMEKGKEVPANKETKTFHQHRPTDSFPSHNLKR 2630
                 T   + E  +AH  G   + RKD++   + P++ +            FP+ N + 
Sbjct: 334  SSGQATGDVQEENLVAHSNGGVSHIRKDVKGDWKFPSDGKHVGHQIDESMPQFPARNFEL 393

Query: 2629 KQIHHLSHQFG-AYNRLLKDGRLGDCIDLLEDMENKGLLDMNKVYHAGFFRACKSQKAVK 2453
               +  S +   AYNRLL+DGR+ DCI LLED++ + LLDM+K+YHA FF+ACK Q+AVK
Sbjct: 394  HNSNGRSPETSDAYNRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVK 453

Query: 2452 EAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLKVDCKLYTTLISTCA 2273
            EAFRFTKLI NPT+STFNMLMSVCASSQD EGA  VL+LVQ++G+  DCKLYTTLIS+CA
Sbjct: 454  EAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCA 513

Query: 2272 KSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRV 2093
            KSGKVD MFEVFH+M N+GVE N HT+GALIDGCA+AGQVAKAFGAYGI+RSKNVKPDRV
Sbjct: 514  KSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRV 573

Query: 2092 VFNALITACGESGAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYK 1913
            VFNALI+ACG+SGAVDRAFDVLAEM+AE HPIDPDH+++GALMKAC  AGQV+RA+EVY+
Sbjct: 574  VFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQ 633

Query: 1912 MIDEYGIRGTPEVYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAG 1733
            MI +YGIRGTPEVYTIAVN CS++GDW+FACSIY DM  K V+PDE+F SA IDVAGHA 
Sbjct: 634  MIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAK 693

Query: 1732 NLDAAFEIIQAARKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMN 1553
             LD AF I+Q A+ +GI  G I+YSSLMGACCNA+DW+KAL+LYE +K + ++ T+S MN
Sbjct: 694  MLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMN 753

Query: 1552 ALLTALCDVDQLQKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKD 1373
            AL+TALC+ +QL KA   L E+K  G++PNTITYS+L++ASE+ DD EV   LLSQAK D
Sbjct: 754  ALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGD 813

Query: 1372 GVAPNLVMCRCIIGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGL 1193
            GV+PNL+MCRCI  +C RRF+KAC  G+PV+S   GR Q++N+WTS AL +YRE I+ G 
Sbjct: 814  GVSPNLIMCRCITSLCKRRFEKACAGGEPVVSFKSGRPQIENKWTSMALMVYRETISGGT 873

Query: 1192 APTAEELSQVLGCLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLL 1013
             PT E +SQVLGCL+LPHD  LRDRL+  LG++ +  K  NI  LVDGFGEYDPRAFSLL
Sbjct: 874  VPTTEVVSQVLGCLQLPHDAALRDRLISTLGINISSQKQHNIFPLVDGFGEYDPRAFSLL 933

Query: 1012 EEAASLGIVPAVSLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLP 833
            EEA SLG++P+VS  + P+  D   L  + AEVYLLT+ KGLKHRLA GAK+P++++++ 
Sbjct: 934  EEATSLGVLPSVSFNKIPLFFDTTELPKNVAEVYLLTIFKGLKHRLAAGAKIPHINLIIS 993

Query: 832  LEKTQIQTPKGEKTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKL 653
            +++ +I+TP+GEKTI++ GR+ Q I ALLRRL + Y   +SR  +R+NGV +K WFQPKL
Sbjct: 994  IQEKEIRTPEGEKTIDLTGRVGQEIGALLRRLDIPYHRKDSR--LRINGVSLKNWFQPKL 1051

Query: 652  DSPLI-RNPADLGLSQRRLGKGISFQQRDIRTGNLSL 545
            DSP     P DL  SQ  LG  IS QQR IR GNLSL
Sbjct: 1052 DSPFSGGKPGDLRSSQVPLGNQISRQQRSIRLGNLSL 1088