BLASTX nr result
ID: Catharanthus23_contig00003619
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus23_contig00003619 (563 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EXC01136.1| 50S ribosomal protein 6 [Morus notabilis] 102 5e-20 ref|XP_002277800.1| PREDICTED: 50S ribosomal protein 6, chloropl... 98 2e-18 ref|NP_568358.1| plastid-specific 50S ribosomal protein 6 [Arabi... 96 8e-18 ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arab... 95 1e-17 ref|XP_006400330.1| hypothetical protein EUTSA_v10015071mg [Eutr... 93 5e-17 sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, c... 93 5e-17 ref|XP_006288938.1| hypothetical protein CARUB_v10002303mg [Caps... 92 9e-17 ref|XP_004238050.1| PREDICTED: 50S ribosomal protein 6, chloropl... 92 9e-17 ref|XP_006356805.1| PREDICTED: 50S ribosomal protein 6, chloropl... 92 1e-16 gb|EMJ16314.1| hypothetical protein PRUPE_ppa012953mg [Prunus pe... 89 7e-16 ref|XP_002302374.1| plastid-specific ribosomal family protein [P... 89 7e-16 ref|XP_006433698.1| hypothetical protein CICLE_v10002778mg [Citr... 88 2e-15 ref|XP_004301446.1| PREDICTED: 50S ribosomal protein 6, chloropl... 87 2e-15 gb|EMJ27548.1| hypothetical protein PRUPE_ppa022547mg [Prunus pe... 87 2e-15 ref|XP_006472361.1| PREDICTED: 50S ribosomal protein 6, chloropl... 87 4e-15 ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast prec... 86 8e-15 gb|ESW09265.1| hypothetical protein PHAVU_009G113500g [Phaseolus... 82 1e-13 ref|XP_004979460.1| PREDICTED: 50S ribosomal protein 6, chloropl... 81 2e-13 gb|EEE52269.1| hypothetical protein OsJ_34231 [Oryza sativa Japo... 81 2e-13 ref|NP_001068076.1| Os11g0550800 [Oryza sativa Japonica Group] g... 81 2e-13 >gb|EXC01136.1| 50S ribosomal protein 6 [Morus notabilis] Length = 115 Score = 102 bits (255), Expect = 5e-20 Identities = 52/111 (46%), Positives = 66/111 (59%), Gaps = 1/111 (0%) Frame = +2 Query: 71 MSVSAIFGTRLAAVSIPPSITGGTTGNRAVP-RIGYGGTRLVTECSSRPQKKATAHHKKS 247 MS +A FG ++ AV IP + ++ P G GG V ECSSRP KKATAHH K+ Sbjct: 1 MSTAAFFGAQIVAVRIPSAPASFAGARKSAPWNGGGGGGPAVIECSSRPTKKATAHHMKT 60 Query: 248 RPRKTQPWDIRRGPTVYXXXXXXXXEWTLVTEADATDDSFPQSAESSLQSP 400 RP+KTQ WDIRR PTVY +W L D++ DS P S+ S ++SP Sbjct: 61 RPKKTQAWDIRRKPTVYAPLPPLPPDWVLAGSDDSSSDSIPSSSSSPVESP 111 >ref|XP_002277800.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Vitis vinifera] Length = 108 Score = 97.8 bits (242), Expect = 2e-18 Identities = 54/101 (53%), Positives = 65/101 (64%), Gaps = 1/101 (0%) Frame = +2 Query: 71 MSVSAIFGTRLAAVSIPPSITGGTTGNRAVPRIGYGGTRLVTECSSRPQKKATAHHKKSR 250 MS+SAIFG AAV S +A PR+G G V ECSSRPQKK T+HH K+R Sbjct: 1 MSISAIFG---AAVPNRCSTAASFGARKAAPRLGGGAA--VIECSSRPQKKGTSHHMKTR 55 Query: 251 PRKTQPWDIRRGPTVYXXXXXXXXEWTLV-TEADATDDSFP 370 PRKTQPWDI+R PTVY EWT+V ++ADA+D + P Sbjct: 56 PRKTQPWDIKRRPTVYAPLPPLPPEWTVVSSDADASDAAVP 96 >ref|NP_568358.1| plastid-specific 50S ribosomal protein 6 [Arabidopsis thaliana] gi|75171293|sp|Q9FKP0.1|PSRP6_ARATH RecName: Full=50S ribosomal protein 6, chloroplastic; AltName: Full=CL25; AltName: Full=Plastid-specific 50S ribosomal protein 6; Short=PSRP-6; Flags: Precursor gi|10177888|dbj|BAB11220.1| unnamed protein product [Arabidopsis thaliana] gi|14517428|gb|AAK62604.1| AT5g17870/MPI7_10 [Arabidopsis thaliana] gi|20147339|gb|AAM10383.1| AT5g17870/MPI7_10 [Arabidopsis thaliana] gi|21554906|gb|AAM63726.1| plastid-specific ribosomal protein 6 precursor (Psrp-6)-like [Arabidopsis thaliana] gi|332005097|gb|AED92480.1| plastid-specific 50S ribosomal protein 6 [Arabidopsis thaliana] Length = 106 Score = 95.5 bits (236), Expect = 8e-18 Identities = 54/110 (49%), Positives = 68/110 (61%), Gaps = 1/110 (0%) Frame = +2 Query: 71 MSVSAIFGTRLAAVSIPPSITGGTTGNRAVPRIGYGG-TRLVTECSSRPQKKATAHHKKS 247 MSVSAIFGT + V+ P + VP++G GG +V ECSSRPQKK+TAHH+K+ Sbjct: 1 MSVSAIFGTGIVTVAASPVLR-----QFQVPKLGNGGGLGMVIECSSRPQKKSTAHHRKT 55 Query: 248 RPRKTQPWDIRRGPTVYXXXXXXXXEWTLVTEADATDDSFPQSAESSLQS 397 RP+KTQPWDI+R PTVY EW+ T A+DD +A L S Sbjct: 56 RPKKTQPWDIKRKPTVYAPLPPLPAEWSPFTL--ASDDGGAATAAGDLVS 103 >ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arabidopsis lyrata subsp. lyrata] gi|297317621|gb|EFH48043.1| hypothetical protein ARALYDRAFT_488653 [Arabidopsis lyrata subsp. lyrata] Length = 108 Score = 95.1 bits (235), Expect = 1e-17 Identities = 51/93 (54%), Positives = 60/93 (64%), Gaps = 1/93 (1%) Frame = +2 Query: 71 MSVSAIFGTRLAAVSIPPSITGGTTGNRAVPRIGYGG-TRLVTECSSRPQKKATAHHKKS 247 MSVSAIFGT + V+ P + VP +G GG +V ECSSRPQKK+TAHH+KS Sbjct: 1 MSVSAIFGTGIVTVAASPVLR-----QFQVPTLGNGGGLGMVIECSSRPQKKSTAHHRKS 55 Query: 248 RPRKTQPWDIRRGPTVYXXXXXXXXEWTLVTEA 346 RP+KTQPWDI+R PTVY EWT T A Sbjct: 56 RPKKTQPWDIKRKPTVYAPLPPLPAEWTPFTLA 88 >ref|XP_006400330.1| hypothetical protein EUTSA_v10015071mg [Eutrema salsugineum] gi|557101420|gb|ESQ41783.1| hypothetical protein EUTSA_v10015071mg [Eutrema salsugineum] Length = 109 Score = 92.8 bits (229), Expect = 5e-17 Identities = 52/106 (49%), Positives = 67/106 (63%), Gaps = 1/106 (0%) Frame = +2 Query: 71 MSVSAIFGTRLAAVSIPPSITGGTTGNRAVPRIGYGG-TRLVTECSSRPQKKATAHHKKS 247 MSVSAIFGT + V+ PS+ VP+ G GG +V ECSSRPQKK+TAHH+K+ Sbjct: 1 MSVSAIFGTGIVTVAASPSLR-----QFQVPKSGNGGGLGMVIECSSRPQKKSTAHHRKT 55 Query: 248 RPRKTQPWDIRRGPTVYXXXXXXXXEWTLVTEADATDDSFPQSAES 385 RP+KTQPWDI+R PTVY +W + A ++DD +A S Sbjct: 56 RPKKTQPWDIKRKPTVYAPLPPLPPDWAPL--ALSSDDGGAATAAS 99 >sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, chloroplastic; AltName: Full=CL25; AltName: Full=Plastid-specific 50S ribosomal protein 6; Short=PSRP-6; Flags: Precursor gi|7578927|gb|AAF64189.1|AF245292_1 plastid-specific ribosomal protein 6 precursor [Spinacia oleracea] Length = 116 Score = 92.8 bits (229), Expect = 5e-17 Identities = 54/117 (46%), Positives = 67/117 (57%), Gaps = 5/117 (4%) Frame = +2 Query: 71 MSVSAIFGTRLAAVSIPPSITGGTTGNRAV---PRIG--YGGTRLVTECSSRPQKKATAH 235 MSVSAIFG R+ V+IP + + R V P G GG + ECSSRPQKK TAH Sbjct: 1 MSVSAIFGARV--VTIPSVLRTSSVDGRTVKLQPSTGGSCGGGVITIECSSRPQKKGTAH 58 Query: 236 HKKSRPRKTQPWDIRRGPTVYXXXXXXXXEWTLVTEADATDDSFPQSAESSLQSPES 406 H K+RP+KT WDI+RGP VY EWT+V+ A DS + SS + +S Sbjct: 59 HMKTRPKKTARWDIKRGPAVYPPLPPLPAEWTIVSSAVDEADSSSSTTSSSAEIAQS 115 >ref|XP_006288938.1| hypothetical protein CARUB_v10002303mg [Capsella rubella] gi|482557644|gb|EOA21836.1| hypothetical protein CARUB_v10002303mg [Capsella rubella] Length = 109 Score = 92.0 bits (227), Expect = 9e-17 Identities = 49/93 (52%), Positives = 60/93 (64%), Gaps = 1/93 (1%) Frame = +2 Query: 71 MSVSAIFGTRLAAVSIPPSITGGTTGNRAVPRIGYGG-TRLVTECSSRPQKKATAHHKKS 247 MSVSAIFGT + V+ + VP++G GG +V ECSSRPQKK+TAHH+KS Sbjct: 1 MSVSAIFGTGIVTVAASSPVLR----QFQVPKLGNGGGLGMVIECSSRPQKKSTAHHRKS 56 Query: 248 RPRKTQPWDIRRGPTVYXXXXXXXXEWTLVTEA 346 RP+K+QPWDI+R PTVY EWT T A Sbjct: 57 RPKKSQPWDIKRKPTVYAPLPPLPAEWTPFTLA 89 >ref|XP_004238050.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Solanum lycopersicum] Length = 111 Score = 92.0 bits (227), Expect = 9e-17 Identities = 55/114 (48%), Positives = 68/114 (59%), Gaps = 5/114 (4%) Frame = +2 Query: 71 MSVSAIFGTRLAAVSIPPSI-----TGGTTGNRAVPRIGYGGTRLVTECSSRPQKKATAH 235 MS SAIFG ++A + ++ TGG T + P GG LV ECSSRPQKKATAH Sbjct: 1 MSASAIFGLQMAVLPRSSTVSATGFTGGATRLASAPT-SIGG--LVIECSSRPQKKATAH 57 Query: 236 HKKSRPRKTQPWDIRRGPTVYXXXXXXXXEWTLVTEADATDDSFPQSAESSLQS 397 HKK+RPRKTQ WDIRRGP VY EW+ A+D+S +A + +S Sbjct: 58 HKKTRPRKTQAWDIRRGPAVYAPLPPLPSEWSF-----ASDESGQPAAAGASES 106 >ref|XP_006356805.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Solanum tuberosum] Length = 111 Score = 91.7 bits (226), Expect = 1e-16 Identities = 55/114 (48%), Positives = 67/114 (58%), Gaps = 5/114 (4%) Frame = +2 Query: 71 MSVSAIFGTRLAAVSIPPSI-----TGGTTGNRAVPRIGYGGTRLVTECSSRPQKKATAH 235 MS SAIFG ++ + ++ TGG T A P GG LV ECSSRPQKKATAH Sbjct: 1 MSASAIFGLQMVVLPRSSTVSTTGFTGGATRLAAAPT-SVGG--LVIECSSRPQKKATAH 57 Query: 236 HKKSRPRKTQPWDIRRGPTVYXXXXXXXXEWTLVTEADATDDSFPQSAESSLQS 397 HKK+RPRKTQ WDIRRGP VY EW+ A+D+S +A + +S Sbjct: 58 HKKTRPRKTQAWDIRRGPAVYAPLPPLPSEWSF-----ASDESGQPAAAGASES 106 >gb|EMJ16314.1| hypothetical protein PRUPE_ppa012953mg [Prunus persica] Length = 148 Score = 89.0 bits (219), Expect = 7e-16 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = +2 Query: 176 GGTRLVTECSSRPQKKATAHHKKSRPRKTQPWDIRRGPTVYXXXXXXXXEWTLVTEADAT 355 GGT L+ E SSRPQKKATAHH+K+RPRKTQPWD++R PTVY +WTLV+ AD Sbjct: 28 GGTGLMIEYSSRPQKKATAHHRKTRPRKTQPWDVKRKPTVYTLLPPLPADWTLVSSADEA 87 Query: 356 DDSFPQ 373 S P+ Sbjct: 88 SSSSPK 93 >ref|XP_002302374.1| plastid-specific ribosomal family protein [Populus trichocarpa] gi|118486925|gb|ABK95296.1| unknown [Populus trichocarpa] gi|222844100|gb|EEE81647.1| plastid-specific ribosomal family protein [Populus trichocarpa] Length = 123 Score = 89.0 bits (219), Expect = 7e-16 Identities = 51/119 (42%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Frame = +2 Query: 71 MSVSAIFGTRLAAVSIP---PSITGGTTGNRAVP-RIGYGGTRLVTECSSRPQKKATAHH 238 MSVS+IFG+ P PS + VP G+G + ECSSRPQKKATAHH Sbjct: 1 MSVSSIFGSPFLLAPKPSTTPSFKPVNGEFKTVPIGTGFGHGGMSIECSSRPQKKATAHH 60 Query: 239 KKSRPRKTQPWDIRRGPTVYXXXXXXXXEWTLVT-----EADATDDSFPQSAESSLQSP 400 +K+RPRK+QPWDI+R PTVY +WTLV+ + D D + ++L++P Sbjct: 61 RKTRPRKSQPWDIKRKPTVYAPLPPLPPDWTLVSSSGDGDGDGDGDGADLPSTTALEAP 119 >ref|XP_006433698.1| hypothetical protein CICLE_v10002778mg [Citrus clementina] gi|557535820|gb|ESR46938.1| hypothetical protein CICLE_v10002778mg [Citrus clementina] Length = 149 Score = 87.8 bits (216), Expect = 2e-15 Identities = 47/106 (44%), Positives = 64/106 (60%) Frame = +2 Query: 47 QRDLQKRKMSVSAIFGTRLAAVSIPPSITGGTTGNRAVPRIGYGGTRLVTECSSRPQKKA 226 Q + +R MS+S+ FG+++ V P+++ G +G LV E SSRPQKKA Sbjct: 31 QSEGNRRGMSISSFFGSQIVVV---PNLSSKKLGVEGKCNVG-----LVIENSSRPQKKA 82 Query: 227 TAHHKKSRPRKTQPWDIRRGPTVYXXXXXXXXEWTLVTEADATDDS 364 TAHH K+RPRKTQPWD+ R PTVY +W+LV++ TD S Sbjct: 83 TAHHMKTRPRKTQPWDVNRKPTVYPPLPPLPPDWSLVSDDTDTDAS 128 >ref|XP_004301446.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Fragaria vesca subsp. vesca] Length = 114 Score = 87.4 bits (215), Expect = 2e-15 Identities = 49/108 (45%), Positives = 63/108 (58%), Gaps = 7/108 (6%) Frame = +2 Query: 71 MSVSAIF-GTRLAAVSIP---PSITGGTTGNRAVPRIGYGGTRLVTECSSRPQKKATAHH 238 MSVSA+ G +L ++ +P PS + P + G T LV ECSSRPQKKATAHH Sbjct: 1 MSVSAVMLGPQLLSMPVPLRNPSAKASFGLTQMAPPLCGGSTGLVIECSSRPQKKATAHH 60 Query: 239 KKSRPRKTQPWDIRRGPTVYXXXXXXXXEWTLVTEAD---ATDDSFPQ 373 +K+RPRKT WD++R PTVY +W + +D A D S PQ Sbjct: 61 RKTRPRKTAAWDVKRKPTVYAPLPPLPADWVFLNSSDDASAADPSPPQ 108 >gb|EMJ27548.1| hypothetical protein PRUPE_ppa022547mg [Prunus persica] Length = 67 Score = 87.4 bits (215), Expect = 2e-15 Identities = 38/59 (64%), Positives = 44/59 (74%) Frame = +2 Query: 197 ECSSRPQKKATAHHKKSRPRKTQPWDIRRGPTVYXXXXXXXXEWTLVTEADATDDSFPQ 373 ECSSRPQKKATAHH+K+RPRKTQPWD++R PTVY +WTLV+ AD S PQ Sbjct: 3 ECSSRPQKKATAHHRKTRPRKTQPWDVKRKPTVYTPLPPLPADWTLVSSADEASSSSPQ 61 >ref|XP_006472361.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Citrus sinensis] Length = 111 Score = 86.7 bits (213), Expect = 4e-15 Identities = 46/98 (46%), Positives = 60/98 (61%) Frame = +2 Query: 71 MSVSAIFGTRLAAVSIPPSITGGTTGNRAVPRIGYGGTRLVTECSSRPQKKATAHHKKSR 250 MS+S+ FG+++ V P+++ G +G LV E SSRPQKKATAHH K+R Sbjct: 1 MSISSFFGSQIVVV---PNLSSKKLGMEEKCNVG-----LVIENSSRPQKKATAHHMKTR 52 Query: 251 PRKTQPWDIRRGPTVYXXXXXXXXEWTLVTEADATDDS 364 PRKTQPWD+ R PTVY +WTLV++ TD S Sbjct: 53 PRKTQPWDVNRKPTVYPPLPPLPPDWTLVSDDTDTDAS 90 >ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast precursor, putative [Ricinus communis] gi|223550719|gb|EEF52205.1| 50S ribosomal protein CL25, chloroplast precursor, putative [Ricinus communis] Length = 126 Score = 85.5 bits (210), Expect = 8e-15 Identities = 46/101 (45%), Positives = 62/101 (61%), Gaps = 4/101 (3%) Frame = +2 Query: 71 MSVSAIFGTRLAAVSIPPSITGGTTGNRAVPRI----GYGGTRLVTECSSRPQKKATAHH 238 MS+S+IFG+ + +S S+ ++ P+ G+ LV ECSSRP+KKATAHH Sbjct: 1 MSISSIFGSPVVLLS-KASLKQLNVEVKSAPKTATGNGWYSGGLVIECSSRPKKKATAHH 59 Query: 239 KKSRPRKTQPWDIRRGPTVYXXXXXXXXEWTLVTEADATDD 361 K+RP+K+QPWDIRR PTVY +WTLV+ A D Sbjct: 60 MKTRPKKSQPWDIRRKPTVYPPLPPLPPDWTLVSSASDNGD 100 >gb|ESW09265.1| hypothetical protein PHAVU_009G113500g [Phaseolus vulgaris] Length = 96 Score = 81.6 bits (200), Expect = 1e-13 Identities = 45/94 (47%), Positives = 57/94 (60%) Frame = +2 Query: 74 SVSAIFGTRLAAVSIPPSITGGTTGNRAVPRIGYGGTRLVTECSSRPQKKATAHHKKSRP 253 S+S++FG AV PP G + + GG +V CSSRP+KKATAHH K+RP Sbjct: 3 SLSSMFGC--GAVMAPPQSLG-------IGKRSDGGLTIV--CSSRPKKKATAHHMKTRP 51 Query: 254 RKTQPWDIRRGPTVYXXXXXXXXEWTLVTEADAT 355 RK+QPWDI R PTVY +WTL+ ADA+ Sbjct: 52 RKSQPWDINRKPTVYDPMPPLPPDWTLIIPADAS 85 >ref|XP_004979460.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Setaria italica] Length = 117 Score = 80.9 bits (198), Expect = 2e-13 Identities = 40/89 (44%), Positives = 51/89 (57%) Frame = +2 Query: 92 GTRLAAVSIPPSITGGTTGNRAVPRIGYGGTRLVTECSSRPQKKATAHHKKSRPRKTQPW 271 GT + A +P + T G ++ +G G L ECSSRPQKK T HH K+RP+KTQPW Sbjct: 10 GTAVPAAPVPARPSRPTVGFPSL--LGGGRAALAVECSSRPQKKGTKHHMKTRPKKTQPW 67 Query: 272 DIRRGPTVYXXXXXXXXEWTLVTEADATD 358 DI+R PT Y +WTLV + D Sbjct: 68 DIKRRPTQYPPLPQLPPDWTLVASSATVD 96 >gb|EEE52269.1| hypothetical protein OsJ_34231 [Oryza sativa Japonica Group] Length = 127 Score = 80.9 bits (198), Expect = 2e-13 Identities = 39/76 (51%), Positives = 49/76 (64%) Frame = +2 Query: 176 GGTRLVTECSSRPQKKATAHHKKSRPRKTQPWDIRRGPTVYXXXXXXXXEWTLVTEADAT 355 GG L ECSSRPQKKAT HH K+RP+K+QPWD +R PT Y +WTLV A AT Sbjct: 35 GGCALAVECSSRPQKKATKHHMKTRPKKSQPWDRKRRPTQYRPLPALRPDWTLVA-AGAT 93 Query: 356 DDSFPQSAESSLQSPE 403 D+ Q+ ++ + PE Sbjct: 94 VDASAQAEDADEEEPE 109 >ref|NP_001068076.1| Os11g0550800 [Oryza sativa Japonica Group] gi|108864492|gb|ABA94192.2| expressed protein [Oryza sativa Japonica Group] gi|113645298|dbj|BAF28439.1| Os11g0550800 [Oryza sativa Japonica Group] gi|215694720|dbj|BAG89911.1| unnamed protein product [Oryza sativa Japonica Group] gi|215740870|dbj|BAG97026.1| unnamed protein product [Oryza sativa Japonica Group] Length = 127 Score = 80.9 bits (198), Expect = 2e-13 Identities = 39/76 (51%), Positives = 49/76 (64%) Frame = +2 Query: 176 GGTRLVTECSSRPQKKATAHHKKSRPRKTQPWDIRRGPTVYXXXXXXXXEWTLVTEADAT 355 GG L ECSSRPQKKAT HH K+RP+K+QPWD +R PT Y +WTLV A AT Sbjct: 35 GGCALAVECSSRPQKKATKHHMKTRPKKSQPWDRKRRPTQYRPLPALPPDWTLVA-AGAT 93 Query: 356 DDSFPQSAESSLQSPE 403 D+ Q+ ++ + PE Sbjct: 94 VDASAQAEDADEEEPE 109