BLASTX nr result
ID: Catharanthus23_contig00003524
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00003524
(736 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloro... 257 2e-66
ref|XP_006355960.1| PREDICTED: 30S ribosomal protein S13, chloro... 256 4e-66
ref|XP_004238695.1| PREDICTED: 30S ribosomal protein S13, chloro... 254 2e-65
ref|XP_006434118.1| hypothetical protein CICLE_v10002692mg [Citr... 251 1e-64
gb|EXB44329.1| 30S ribosomal protein S13 [Morus notabilis] 251 2e-64
gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea bras... 249 7e-64
ref|XP_002306609.2| hypothetical protein POPTR_0005s16160g [Popu... 246 4e-63
ref|XP_002302256.1| hypothetical protein POPTR_0002s08900g [Popu... 246 4e-63
gb|EPS72074.1| hypothetical protein M569_02688 [Genlisea aurea] 246 6e-63
gb|EOY16180.1| Ribosomal protein S13/S18 family [Theobroma cacao] 240 4e-61
gb|EMJ27157.1| hypothetical protein PRUPE_ppa012483mg [Prunus pe... 239 9e-61
ref|XP_004140327.1| PREDICTED: 30S ribosomal protein S13, chloro... 239 9e-61
ref|XP_004290827.1| PREDICTED: 30S ribosomal protein S13, chloro... 238 2e-60
gb|AEC10995.1| 30S ribosomal protein s13 [Camellia sinensis] 238 2e-60
ref|NP_568299.1| 30S ribosomal protein S13 [Arabidopsis thaliana... 237 3e-60
ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus... 237 3e-60
ref|XP_006399943.1| hypothetical protein EUTSA_v10014848mg [Eutr... 237 3e-60
ref|XP_006288790.1| hypothetical protein CARUB_v10002113mg [Caps... 236 6e-60
ref|XP_006827867.1| hypothetical protein AMTR_s00008p00089340 [A... 234 2e-59
ref|NP_001236787.1| uncharacterized protein LOC100500355 [Glycin... 234 2e-59
>ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloroplastic [Vitis
vinifera] gi|302141873|emb|CBI19076.3| unnamed protein
product [Vitis vinifera]
Length = 167
Score = 257 bits (657), Expect = 2e-66
Identities = 131/163 (80%), Positives = 139/163 (85%)
Frame = +2
Query: 176 MATPVLPSLSLICNIXXXXXXXXXXXXXXXXTIPKIGGLSIKCARVGGVEIPNNKRVEYS 355
+ATP+ PSLSLICN PK GGLSIKCARVGGVEIPN+KRVEYS
Sbjct: 5 LATPLAPSLSLICNTRNPLSPSNNLSFSTPAP-PKFGGLSIKCARVGGVEIPNSKRVEYS 63
Query: 356 LQYIHGIGRTSAKQILNDLGMENKITKDLSEEELTTLRDEVSKYMIEGDLRRFNAIAIRR 535
LQYIHGIGR+ +KQIL DLGMENKITKDLSEEEL TLRDEVSKYMIEGDLRRFNA+AIRR
Sbjct: 64 LQYIHGIGRSRSKQILCDLGMENKITKDLSEEELITLRDEVSKYMIEGDLRRFNALAIRR 123
Query: 536 LKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKA 664
LKEIQCYRG+RHIQGLPCRGQRTKNNCRTLKGKRV+IAGKKKA
Sbjct: 124 LKEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKRVSIAGKKKA 166
>ref|XP_006355960.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Solanum
tuberosum]
Length = 168
Score = 256 bits (655), Expect = 4e-66
Identities = 129/165 (78%), Positives = 140/165 (84%)
Frame = +2
Query: 176 MATPVLPSLSLICNIXXXXXXXXXXXXXXXXTIPKIGGLSIKCARVGGVEIPNNKRVEYS 355
+ATPVLPSLSLICN + PK GGL IKC RVGGVE+PNNKRVE+S
Sbjct: 5 LATPVLPSLSLICNTSSISKHSSLSFSTPT-SFPKTGGLVIKCVRVGGVEVPNNKRVEFS 63
Query: 356 LQYIHGIGRTSAKQILNDLGMENKITKDLSEEELTTLRDEVSKYMIEGDLRRFNAIAIRR 535
LQYIHGIGRT+A+QIL DL MENK+ KD+SEEEL TLR+EVSKYMIEGDLRRFNA+AIRR
Sbjct: 64 LQYIHGIGRTAARQILVDLQMENKVMKDMSEEELITLREEVSKYMIEGDLRRFNALAIRR 123
Query: 536 LKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 670
LKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGK+VAIAGKKKAPR
Sbjct: 124 LKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKKAPR 168
>ref|XP_004238695.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Solanum
lycopersicum]
Length = 168
Score = 254 bits (649), Expect = 2e-65
Identities = 128/165 (77%), Positives = 139/165 (84%)
Frame = +2
Query: 176 MATPVLPSLSLICNIXXXXXXXXXXXXXXXXTIPKIGGLSIKCARVGGVEIPNNKRVEYS 355
+ATPVLPSLSLICN + PK GL IKC RVGGVE+PNNKRVE+S
Sbjct: 5 LATPVLPSLSLICNTSSISKHSSLSFSTPT-SFPKTAGLVIKCVRVGGVEVPNNKRVEFS 63
Query: 356 LQYIHGIGRTSAKQILNDLGMENKITKDLSEEELTTLRDEVSKYMIEGDLRRFNAIAIRR 535
LQYIHGIGRT+A+QIL DL MENK+ KD+SEEEL TLR+EVSKYMIEGDLRRFNA+AIRR
Sbjct: 64 LQYIHGIGRTTARQILVDLQMENKVMKDMSEEELITLREEVSKYMIEGDLRRFNALAIRR 123
Query: 536 LKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 670
LKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGK+VAIAGKKKAPR
Sbjct: 124 LKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKKAPR 168
>ref|XP_006434118.1| hypothetical protein CICLE_v10002692mg [Citrus clementina]
gi|568837402|ref|XP_006472713.1| PREDICTED: 30S
ribosomal protein S13, chloroplastic-like [Citrus
sinensis] gi|557536240|gb|ESR47358.1| hypothetical
protein CICLE_v10002692mg [Citrus clementina]
Length = 169
Score = 251 bits (642), Expect = 1e-64
Identities = 125/165 (75%), Positives = 137/165 (83%)
Frame = +2
Query: 176 MATPVLPSLSLICNIXXXXXXXXXXXXXXXXTIPKIGGLSIKCARVGGVEIPNNKRVEYS 355
+A PV P+LS+ICN P+ GLSI+CARVGGVEIPNNKR+EYS
Sbjct: 5 LAMPVAPALSVICNGHNNNLLTNASLSFPVSKQPQYPGLSIQCARVGGVEIPNNKRIEYS 64
Query: 356 LQYIHGIGRTSAKQILNDLGMENKITKDLSEEELTTLRDEVSKYMIEGDLRRFNAIAIRR 535
LQYIHG+GRT A+QIL DL MENKITKD+SEEEL T+RDEVSKYMIEGDLRRFNA+AIRR
Sbjct: 65 LQYIHGVGRTRARQILVDLKMENKITKDMSEEELITIRDEVSKYMIEGDLRRFNALAIRR 124
Query: 536 LKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 670
LKEIQCYRG+RHIQGLPCRGQ TKNNCRTLKGKRVAIAGKKKAPR
Sbjct: 125 LKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 169
>gb|EXB44329.1| 30S ribosomal protein S13 [Morus notabilis]
Length = 168
Score = 251 bits (641), Expect = 2e-64
Identities = 125/165 (75%), Positives = 139/165 (84%)
Frame = +2
Query: 176 MATPVLPSLSLICNIXXXXXXXXXXXXXXXXTIPKIGGLSIKCARVGGVEIPNNKRVEYS 355
+A PV PSLS ICN + +IGGLS+KCARVGGVEIPNNKR+E+S
Sbjct: 5 LAMPVAPSLSAICNGLSSISLSNRLSFPTTNPL-QIGGLSVKCARVGGVEIPNNKRIEFS 63
Query: 356 LQYIHGIGRTSAKQILNDLGMENKITKDLSEEELTTLRDEVSKYMIEGDLRRFNAIAIRR 535
LQY+HGIGRTSA++ILNDL MENK+TKD SE+EL LRDEVSKYMIEGDLRRFNA+AIRR
Sbjct: 64 LQYVHGIGRTSARKILNDLSMENKLTKDFSEDELIILRDEVSKYMIEGDLRRFNALAIRR 123
Query: 536 LKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 670
LKEIQCYRGVRHI+GLPCRGQRTKNNCRTLKGK+VAIAGKKKAPR
Sbjct: 124 LKEIQCYRGVRHIKGLPCRGQRTKNNCRTLKGKKVAIAGKKKAPR 168
>gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea brasiliensis]
Length = 168
Score = 249 bits (636), Expect = 7e-64
Identities = 126/165 (76%), Positives = 137/165 (83%)
Frame = +2
Query: 176 MATPVLPSLSLICNIXXXXXXXXXXXXXXXXTIPKIGGLSIKCARVGGVEIPNNKRVEYS 355
+A PV PSLSLICN PKI GLSI+CARVGGVEIPNNKRVEYS
Sbjct: 5 LAMPVAPSLSLICN-GWRNNSLSTFVSLPISNPPKIHGLSIQCARVGGVEIPNNKRVEYS 63
Query: 356 LQYIHGIGRTSAKQILNDLGMENKITKDLSEEELTTLRDEVSKYMIEGDLRRFNAIAIRR 535
LQYIHG+GR+ A+QIL+DL M+NKITKDLSEEEL TLRDEVSKYMIEGDLRRFNA+ IR
Sbjct: 64 LQYIHGVGRSRARQILSDLSMQNKITKDLSEEELITLRDEVSKYMIEGDLRRFNALNIRG 123
Query: 536 LKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 670
LKEIQC+RG+RHIQGLPCRGQRTKNNCRTLKGKRV +AGKKKAPR
Sbjct: 124 LKEIQCHRGIRHIQGLPCRGQRTKNNCRTLKGKRVTVAGKKKAPR 168
>ref|XP_002306609.2| hypothetical protein POPTR_0005s16160g [Populus trichocarpa]
gi|550339105|gb|EEE93605.2| hypothetical protein
POPTR_0005s16160g [Populus trichocarpa]
Length = 168
Score = 246 bits (629), Expect = 4e-63
Identities = 126/165 (76%), Positives = 137/165 (83%)
Frame = +2
Query: 176 MATPVLPSLSLICNIXXXXXXXXXXXXXXXXTIPKIGGLSIKCARVGGVEIPNNKRVEYS 355
+A PV+PSLS ICN PK+ LSI+CARVGGVEIPN+KRVEYS
Sbjct: 5 LAMPVVPSLSAICN-GLKNTSLSSSISPPVSNPPKVCSLSIRCARVGGVEIPNSKRVEYS 63
Query: 356 LQYIHGIGRTSAKQILNDLGMENKITKDLSEEELTTLRDEVSKYMIEGDLRRFNAIAIRR 535
LQYIHGIGR+ A+QIL+DL MENKITKDLSE+EL TLRDEVSKYMIEGDLRRFNA+ IRR
Sbjct: 64 LQYIHGIGRSIARQILSDLTMENKITKDLSEDELITLRDEVSKYMIEGDLRRFNALNIRR 123
Query: 536 LKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 670
LKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRV+I GKKKAPR
Sbjct: 124 LKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVSIPGKKKAPR 168
>ref|XP_002302256.1| hypothetical protein POPTR_0002s08900g [Populus trichocarpa]
gi|118488232|gb|ABK95935.1| unknown [Populus
trichocarpa] gi|222843982|gb|EEE81529.1| hypothetical
protein POPTR_0002s08900g [Populus trichocarpa]
Length = 168
Score = 246 bits (629), Expect = 4e-63
Identities = 125/165 (75%), Positives = 136/165 (82%)
Frame = +2
Query: 176 MATPVLPSLSLICNIXXXXXXXXXXXXXXXXTIPKIGGLSIKCARVGGVEIPNNKRVEYS 355
+A PV+PSLS ICN PK G LSI+CARVGGVEIPN+KRVEYS
Sbjct: 5 LAMPVVPSLSAICN-GLKSTSLSNSISLPISNPPKAGSLSIRCARVGGVEIPNSKRVEYS 63
Query: 356 LQYIHGIGRTSAKQILNDLGMENKITKDLSEEELTTLRDEVSKYMIEGDLRRFNAIAIRR 535
LQYIHGIGR++A+QIL+DL MENKITKDLSEEEL LRDEVSKY IEGDLRRFNA+ IRR
Sbjct: 64 LQYIHGIGRSNARQILSDLSMENKITKDLSEEELIILRDEVSKYTIEGDLRRFNALNIRR 123
Query: 536 LKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 670
LKEIQCYRG+RHIQGLPCRGQRTKNNCRTLKGKRV+I GKKKAPR
Sbjct: 124 LKEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKRVSIPGKKKAPR 168
>gb|EPS72074.1| hypothetical protein M569_02688 [Genlisea aurea]
Length = 158
Score = 246 bits (628), Expect = 6e-63
Identities = 117/131 (89%), Positives = 128/131 (97%)
Frame = +2
Query: 269 TIPKIGGLSIKCARVGGVEIPNNKRVEYSLQYIHGIGRTSAKQILNDLGMENKITKDLSE 448
+ PK+GGLSIKCARVGGVEIPNNKRVEYSLQYIHGIGRT+++QILNDL ++NK+TKDLSE
Sbjct: 27 SFPKVGGLSIKCARVGGVEIPNNKRVEYSLQYIHGIGRTNSRQILNDLNLDNKLTKDLSE 86
Query: 449 EELTTLRDEVSKYMIEGDLRRFNAIAIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLK 628
EELT+LRDEVSKYMIEGDLRRFNA+AIRRLKEIQCYRG+RHIQGLPCRGQRTKNNCRTLK
Sbjct: 87 EELTSLRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGMRHIQGLPCRGQRTKNNCRTLK 146
Query: 629 GKRVAIAGKKK 661
GKRVAI GKKK
Sbjct: 147 GKRVAIPGKKK 157
>gb|EOY16180.1| Ribosomal protein S13/S18 family [Theobroma cacao]
Length = 168
Score = 240 bits (612), Expect = 4e-61
Identities = 124/165 (75%), Positives = 133/165 (80%)
Frame = +2
Query: 176 MATPVLPSLSLICNIXXXXXXXXXXXXXXXXTIPKIGGLSIKCARVGGVEIPNNKRVEYS 355
+A PV PSLS ICN PK LSI+CARVGGVEIPNNKRVE+S
Sbjct: 5 LAMPVAPSLSFICN-KTSSLSLSNSVSLPLSNPPKYRSLSIECARVGGVEIPNNKRVEFS 63
Query: 356 LQYIHGIGRTSAKQILNDLGMENKITKDLSEEELTTLRDEVSKYMIEGDLRRFNAIAIRR 535
LQYIHGIGR+ A++IL DL MENKITKDLSEEEL T+RDEVSKYMIEGDLRRFNA+ IRR
Sbjct: 64 LQYIHGIGRSRARKILCDLKMENKITKDLSEEELITIRDEVSKYMIEGDLRRFNALNIRR 123
Query: 536 LKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 670
LKEIQCYRGVRHIQGLPCRGQRTKNN RTLKGKRV +AGKKKAPR
Sbjct: 124 LKEIQCYRGVRHIQGLPCRGQRTKNNTRTLKGKRVTVAGKKKAPR 168
>gb|EMJ27157.1| hypothetical protein PRUPE_ppa012483mg [Prunus persica]
Length = 167
Score = 239 bits (609), Expect = 9e-61
Identities = 121/163 (74%), Positives = 132/163 (80%)
Frame = +2
Query: 176 MATPVLPSLSLICNIXXXXXXXXXXXXXXXXTIPKIGGLSIKCARVGGVEIPNNKRVEYS 355
+A P+ PSLS+ICN K+GGLSIKC RVGGVEIPNNKRVE+S
Sbjct: 5 LAMPLAPSLSVICN-GRNPNPLSNSLSFPLRNPNKVGGLSIKCVRVGGVEIPNNKRVEFS 63
Query: 356 LQYIHGIGRTSAKQILNDLGMENKITKDLSEEELTTLRDEVSKYMIEGDLRRFNAIAIRR 535
LQY+HGIGRT A+ IL DL MENKITKDLSEEELT +RDEVSKYMIEGDLRRFNA+ IRR
Sbjct: 64 LQYVHGIGRTRARTILIDLNMENKITKDLSEEELTIIRDEVSKYMIEGDLRRFNALNIRR 123
Query: 536 LKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKA 664
LKEIQCYRG+RHIQGLPCRGQRTKNN RTLKGKRV +AGKKKA
Sbjct: 124 LKEIQCYRGIRHIQGLPCRGQRTKNNTRTLKGKRVTVAGKKKA 166
>ref|XP_004140327.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Cucumis
sativus] gi|449518817|ref|XP_004166432.1| PREDICTED: 30S
ribosomal protein S13, chloroplastic-like [Cucumis
sativus]
Length = 167
Score = 239 bits (609), Expect = 9e-61
Identities = 120/164 (73%), Positives = 135/164 (82%)
Frame = +2
Query: 179 ATPVLPSLSLICNIXXXXXXXXXXXXXXXXTIPKIGGLSIKCARVGGVEIPNNKRVEYSL 358
A P+ SLSLI N + P++ GL IKC RVGGVEIPNNKRV+YSL
Sbjct: 6 AIPLAHSLSLISN--SRNFNPLSNTLSFPISNPQVRGLQIKCVRVGGVEIPNNKRVQYSL 63
Query: 359 QYIHGIGRTSAKQILNDLGMENKITKDLSEEELTTLRDEVSKYMIEGDLRRFNAIAIRRL 538
QY+HGIGR +AK+IL DL +ENKITKDLSEEEL ++RDEVSKYMIEGDLRRFNA+AIRRL
Sbjct: 64 QYVHGIGRNNAKKILFDLNVENKITKDLSEEELISIRDEVSKYMIEGDLRRFNALAIRRL 123
Query: 539 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 670
KEIQCYRG+RHIQGLPCRGQRTKNNCRTLKGK++AIAGKKKAPR
Sbjct: 124 KEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKKIAIAGKKKAPR 167
>ref|XP_004290827.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 167
Score = 238 bits (607), Expect = 2e-60
Identities = 118/163 (72%), Positives = 133/163 (81%)
Frame = +2
Query: 176 MATPVLPSLSLICNIXXXXXXXXXXXXXXXXTIPKIGGLSIKCARVGGVEIPNNKRVEYS 355
+A P+ PSLS++C T K+GGLSI+C RVGGVEIPNNKRVE+S
Sbjct: 5 LAMPLAPSLSVVCT-GRNPNPFSTTLSLPIKTPTKVGGLSIRCVRVGGVEIPNNKRVEFS 63
Query: 356 LQYIHGIGRTSAKQILNDLGMENKITKDLSEEELTTLRDEVSKYMIEGDLRRFNAIAIRR 535
LQY+HGIGRT A+ ILNDL MENK+TKDLSEEELT +R+EVSKYMIEGDLRRFNA+ IRR
Sbjct: 64 LQYVHGIGRTRARTILNDLKMENKVTKDLSEEELTIIREEVSKYMIEGDLRRFNALNIRR 123
Query: 536 LKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKA 664
LKEIQCYRG+RHIQGLPCRGQRTKNN RTLKGKRV +AGKKKA
Sbjct: 124 LKEIQCYRGIRHIQGLPCRGQRTKNNTRTLKGKRVTVAGKKKA 166
>gb|AEC10995.1| 30S ribosomal protein s13 [Camellia sinensis]
Length = 165
Score = 238 bits (607), Expect = 2e-60
Identities = 114/134 (85%), Positives = 124/134 (92%)
Frame = +2
Query: 269 TIPKIGGLSIKCARVGGVEIPNNKRVEYSLQYIHGIGRTSAKQILNDLGMENKITKDLSE 448
T PK GGLSIKC RVGGVEIPNNKR+EYSL+YIHGIGRT+++QIL DL M+NKITKDL E
Sbjct: 32 TPPKFGGLSIKCVRVGGVEIPNNKRIEYSLRYIHGIGRTTSRQILVDLSMDNKITKDLFE 91
Query: 449 EELTTLRDEVSKYMIEGDLRRFNAIAIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLK 628
EEL + RD+VSKYM+EGD RRFNA+ IRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLK
Sbjct: 92 EELISFRDQVSKYMVEGDFRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLK 151
Query: 629 GKRVAIAGKKKAPR 670
GKRVAIAGKKKAPR
Sbjct: 152 GKRVAIAGKKKAPR 165
>ref|NP_568299.1| 30S ribosomal protein S13 [Arabidopsis thaliana]
gi|1173194|sp|P42732.1|RR13_ARATH RecName: Full=30S
ribosomal protein S13, chloroplastic; AltName:
Full=CS13; Flags: Precursor gi|16767|emb|CAA79013.1|
chloroplast 30S ribosomal protein S13 [Arabidopsis
thaliana] gi|662869|emb|CAA88028.1| chloroplast
ribosomal protein S13 [Arabidopsis thaliana]
gi|1107483|emb|CAA63021.1| 30S ribosomal protein S13
[Arabidopsis thaliana] gi|1515107|emb|CAA60413.1|
plastid ribosomal protein S13 [Arabidopsis thaliana]
gi|14517397|gb|AAK62589.1| AT5g14320/F18O22_110
[Arabidopsis thaliana] gi|15450549|gb|AAK96452.1|
AT5g14320/F18O22_110 [Arabidopsis thaliana]
gi|332004633|gb|AED92016.1| 30S ribosomal protein S13
[Arabidopsis thaliana]
Length = 169
Score = 237 bits (605), Expect = 3e-60
Identities = 120/166 (72%), Positives = 132/166 (79%)
Frame = +2
Query: 173 IMATPVLPSLSLICNIXXXXXXXXXXXXXXXXTIPKIGGLSIKCARVGGVEIPNNKRVEY 352
++A PV SLSLICN P LSI+CARVGGVEIP NKR+EY
Sbjct: 4 MVAMPVAHSLSLICNWAKSNPLSRNTLALPASNTPNKQSLSIRCARVGGVEIPANKRIEY 63
Query: 353 SLQYIHGIGRTSAKQILNDLGMENKITKDLSEEELTTLRDEVSKYMIEGDLRRFNAIAIR 532
SLQYIHGIGRT A+QIL DL MENKITKD++EEEL LRDEVSKYMIEGDLRRFNA+AI+
Sbjct: 64 SLQYIHGIGRTRARQILVDLQMENKITKDMAEEELIILRDEVSKYMIEGDLRRFNALAIK 123
Query: 533 RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 670
RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGK++AIAGKKK +
Sbjct: 124 RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKIAIAGKKKVSK 169
>ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus communis]
gi|223546910|gb|EEF48407.1| 30S ribosomal protein S13,
putative [Ricinus communis]
Length = 290
Score = 237 bits (605), Expect = 3e-60
Identities = 113/130 (86%), Positives = 123/130 (94%)
Frame = +2
Query: 281 IGGLSIKCARVGGVEIPNNKRVEYSLQYIHGIGRTSAKQILNDLGMENKITKDLSEEELT 460
+ GLSI+CARVGGVEIPNNKR+EYSLQYIHG+GR+ A+QIL+DL MENKITK+LSEEEL
Sbjct: 161 VHGLSIRCARVGGVEIPNNKRIEYSLQYIHGVGRSRARQILSDLSMENKITKELSEEELI 220
Query: 461 TLRDEVSKYMIEGDLRRFNAIAIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRV 640
TLRDEVSKYMIEGDLRRFNA+ IRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRV
Sbjct: 221 TLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRV 280
Query: 641 AIAGKKKAPR 670
+AGKKK PR
Sbjct: 281 TVAGKKKTPR 290
Score = 125 bits (313), Expect = 2e-26
Identities = 64/114 (56%), Positives = 81/114 (71%)
Frame = +2
Query: 296 IKCARVGGVEIPNNKRVEYSLQYIHGIGRTSAKQILNDLGMENKITKDLSEEELTTLRDE 475
++C RVG EIP++K++ ++LQ+I GIGR A QIL DL +ENK TKDL+ EL TLR+E
Sbjct: 33 VQCLRVGNAEIPDDKQLRFALQHIRGIGRQRAHQILIDLSLENKRTKDLTGLELHTLRNE 92
Query: 476 VSKYMIEGDLRRFNAIAIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKR 637
VSKY+I +L R I+RL +IQCYRG H LPCRGQ T+ N RT KG R
Sbjct: 93 VSKYLIGEELTRCVRSDIQRLADIQCYRGYNHACLLPCRGQLTRTNARTRKGMR 146
>ref|XP_006399943.1| hypothetical protein EUTSA_v10014848mg [Eutrema salsugineum]
gi|557101033|gb|ESQ41396.1| hypothetical protein
EUTSA_v10014848mg [Eutrema salsugineum]
Length = 169
Score = 237 bits (604), Expect = 3e-60
Identities = 121/166 (72%), Positives = 133/166 (80%)
Frame = +2
Query: 173 IMATPVLPSLSLICNIXXXXXXXXXXXXXXXXTIPKIGGLSIKCARVGGVEIPNNKRVEY 352
++A PV SLSLICN PK LSI+ ARVGGVEIP+NKR+EY
Sbjct: 4 MVAMPVAHSLSLICNWTKSNSLSRNTLALPASNAPKKQSLSIRSARVGGVEIPSNKRIEY 63
Query: 353 SLQYIHGIGRTSAKQILNDLGMENKITKDLSEEELTTLRDEVSKYMIEGDLRRFNAIAIR 532
SLQYIHGIGRT A+QIL DL MENKITKD++EEEL LRDEVSKYMIEGDLRRFNA+AI+
Sbjct: 64 SLQYIHGIGRTRARQILVDLQMENKITKDMAEEELIILRDEVSKYMIEGDLRRFNALAIK 123
Query: 533 RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 670
RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGK+VAIAGKKK +
Sbjct: 124 RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKKVSK 169
>ref|XP_006288790.1| hypothetical protein CARUB_v10002113mg [Capsella rubella]
gi|482557496|gb|EOA21688.1| hypothetical protein
CARUB_v10002113mg [Capsella rubella]
Length = 169
Score = 236 bits (602), Expect = 6e-60
Identities = 119/166 (71%), Positives = 133/166 (80%)
Frame = +2
Query: 173 IMATPVLPSLSLICNIXXXXXXXXXXXXXXXXTIPKIGGLSIKCARVGGVEIPNNKRVEY 352
++A PV SLSLIC+ P LSI+CARVGGVEIP+NKR+EY
Sbjct: 4 MVAMPVAHSLSLICSWTKSNPLSRNTLALPASNSPNKQSLSIRCARVGGVEIPSNKRIEY 63
Query: 353 SLQYIHGIGRTSAKQILNDLGMENKITKDLSEEELTTLRDEVSKYMIEGDLRRFNAIAIR 532
SLQYIHGIGRT A+QIL DL MENKITKD++EEEL LRDEVSKYMIEGDLRRFNA+AI+
Sbjct: 64 SLQYIHGIGRTRARQILVDLQMENKITKDMAEEELIILRDEVSKYMIEGDLRRFNALAIK 123
Query: 533 RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 670
RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGK++AIAGKKK +
Sbjct: 124 RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKIAIAGKKKVSK 169
>ref|XP_006827867.1| hypothetical protein AMTR_s00008p00089340 [Amborella trichopoda]
gi|548832502|gb|ERM95283.1| hypothetical protein
AMTR_s00008p00089340 [Amborella trichopoda]
Length = 167
Score = 234 bits (598), Expect = 2e-59
Identities = 114/131 (87%), Positives = 121/131 (92%)
Frame = +2
Query: 278 KIGGLSIKCARVGGVEIPNNKRVEYSLQYIHGIGRTSAKQILNDLGMENKITKDLSEEEL 457
K GLSIKC R+GGVEIPNNKRV+YSLQYIHGIGRT A QIL DLGM+NKITKDLSEEEL
Sbjct: 37 KFQGLSIKCVRIGGVEIPNNKRVQYSLQYIHGIGRTRALQILCDLGMQNKITKDLSEEEL 96
Query: 458 TTLRDEVSKYMIEGDLRRFNAIAIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKR 637
++RDEVSKYMIEGDLRRFNA+AIRRLKEIQCYRGVRHI GLPCRGQ TKNNCRTLKGK+
Sbjct: 97 KSVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVRHIMGLPCRGQHTKNNCRTLKGKK 156
Query: 638 VAIAGKKKAPR 670
VAIAGKKK PR
Sbjct: 157 VAIAGKKKTPR 167
>ref|NP_001236787.1| uncharacterized protein LOC100500355 [Glycine max]
gi|255630109|gb|ACU15408.1| unknown [Glycine max]
Length = 162
Score = 234 bits (598), Expect = 2e-59
Identities = 117/162 (72%), Positives = 132/162 (81%)
Frame = +2
Query: 176 MATPVLPSLSLICNIXXXXXXXXXXXXXXXXTIPKIGGLSIKCARVGGVEIPNNKRVEYS 355
+A PV PSL++I N PK+ G SIKC RVGGVEIPNNKR+EYS
Sbjct: 5 LAMPVAPSLAIISNSRLSNTLSVPVLNK-----PKVQGSSIKCVRVGGVEIPNNKRIEYS 59
Query: 356 LQYIHGIGRTSAKQILNDLGMENKITKDLSEEELTTLRDEVSKYMIEGDLRRFNAIAIRR 535
LQYIHG+GRT AKQIL D+ M+NKITK+L+EEEL TLRDEVSKYMIEGDLRRFNA+ I+R
Sbjct: 60 LQYIHGVGRTRAKQILCDIQMDNKITKELTEEELITLRDEVSKYMIEGDLRRFNAVNIKR 119
Query: 536 LKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKK 661
LK+IQCYRG+RHIQGLPCRGQRTKNNCRTLKGK+VAIAGKKK
Sbjct: 120 LKDIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKK 161