BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00002954
         (2499 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]        721   0.0  
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-...   721   0.0  
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-...   718   0.0  
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-...   715   0.0  
emb|CBI40014.3| unnamed protein product [Vitis vinifera]              713   0.0  
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr...   711   0.0  
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   710   0.0  
gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]     687   0.0  
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   679   0.0  
ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-...   673   0.0  
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-...   672   0.0  
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-...   668   0.0  
ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trich...   644   0.0  
ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Caps...   622   e-175
ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutr...   618   e-174
emb|CAD20831.2| sigma factor [Spinacia oleracea]                      617   e-174
ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [A...   613   e-172
ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Popu...   612   e-172
gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus pe...   612   e-172
ref|XP_004500709.1| PREDICTED: RNA polymerase sigma factor sigB-...   605   e-170

>gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
          Length = 623

 Score =  721 bits (1862), Expect = 0.0
 Identities = 399/626 (63%), Positives = 452/626 (72%), Gaps = 12/626 (1%)
 Frame = +3

Query: 333  MSCLLPQFKCLPDTFALTFKSHH-HSATQLSKGREPEYIRTQCI---LXXXXXXXXXXXX 500
            MSCLLPQFKC PDTF++ F++HH H       G    +   QC    L            
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSHHFLIAVTGMVKYFSPRQCSCGNLTNPPKVSGLIFV 60

Query: 501  XLEIEKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWT 680
             L   K  +        STT  S    TSTT TAVLD+EKL+L S +A+ + +A  RPWT
Sbjct: 61   VLAKHKEHICFRTQCVLSTTSSS----TSTTATAVLDVEKLRLPSFEAHPNSVAVDRPWT 116

Query: 681  YTGATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNL 860
            Y GATG   E +LGA  AT+NL+TS                           +M  N N 
Sbjct: 117  YIGATGPPSEASLGATLATDNLLTSDEAVIAAAAAEAVALARAAVKVAKDAALMAENYNY 176

Query: 861  SKSDSKETDVPSDANTFMFESIMPYQLAERVSAIGESKDDEIGLGKSQSSECPLTESDDV 1040
            +K++ K + V    ++F  +  + +  AER   IG+S  DE  + +  S +   TESD++
Sbjct: 177  AKTEMK-SGVSFATDSFTSKWAL-FTEAERAGIIGDSPTDESEMEEDDSEQNSTTESDEL 234

Query: 1041 EPTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQ 1220
            EPT       + QLS +I VRS                   NVVSVKSGST RKRR ++Q
Sbjct: 235  EPTNEELEHLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGSTNRKRRGALQ 294

Query: 1221 DVDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWA 1400
            DVDYSDPLRYLRGTTS+SRLLTA EE +LS GIQDLLKLERLQ EL ERCG +PTFAQWA
Sbjct: 295  DVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWA 354

Query: 1401 AAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 1580
            AAAGVDQKTLR RLNYG+ CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG
Sbjct: 355  AAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 414

Query: 1581 AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENG 1760
            AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL++ENG
Sbjct: 415  AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG 474

Query: 1761 RHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPS--------EVIADPE 1916
            RHPD+EEVAEATGLSMKRL+AV+LTPKAPRSLDQKIGINQNLKPS        EVIADPE
Sbjct: 475  RHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSVCPVSSLAEVIADPE 534

Query: 1917 AETAEDLLIKQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERI 2096
            AETAED+LIKQFMR+DLEKVLDSL+ RE+QVIRWRFG+EDGRMKTLQEIGELMGVSRERI
Sbjct: 535  AETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIGELMGVSRERI 594

Query: 2097 RQIESCAFRKLKNKRRTKHLQQYLVA 2174
            RQIESCAFRKLKNK+RTKHLQQYL++
Sbjct: 595  RQIESCAFRKLKNKKRTKHLQQYLLS 620


>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum tuberosum]
          Length = 613

 Score =  721 bits (1861), Expect = 0.0
 Identities = 395/618 (63%), Positives = 446/618 (72%), Gaps = 4/618 (0%)
 Frame = +3

Query: 333  MSCLLPQFKCLPDTFALTFKSHHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXX-LE 509
            MS LLPQF  LPD F +  K+   +  QLSK R+  ++RTQCIL              L 
Sbjct: 1    MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDHIHLRTQCILSTTSAVTSTATSTVLG 60

Query: 510  IEKLRLPSLEPNSNSTT-DGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTYT 686
            IEKL+LPS+E  SNS   + SWK P++ T T V D++KLKL S +AN   +A  RPWTYT
Sbjct: 61   IEKLQLPSIEILSNSVAAERSWKSPSAAT-TTVPDIQKLKLPSFEANPDSVAPDRPWTYT 119

Query: 687  GATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSK 866
            GA G   E N       EN + S                           M++   NL+ 
Sbjct: 120  GAVGPPAEANT----KPENSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGYNNLND 175

Query: 867  SDSKETDVPSDANTFMFESIMPYQLAE--RVSAIGESKDDEIGLGKSQSSECPLTESDDV 1040
            SD+      S+A T  FES+   Q  E  RV    E    E+    S      LT+SDD+
Sbjct: 176  SDNVGRGTLSEARTAPFESVHLAQPGETRRVGVCAELNGSEMKWTGSSLFRETLTDSDDL 235

Query: 1041 EPTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQ 1220
            EP+       Q+QLS  I V+S                   NVV+VKSGST RK+R+S+Q
Sbjct: 236  EPSPEELEILQSQLSNVIAVKSNRQTERKAKRAKSVEKAAANVVTVKSGSTSRKKRASVQ 295

Query: 1221 DVDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWA 1400
            DVDYSDPLRYLRGTT SSRLLTA+EE +LS GIQDLLKLERLQVELTERCG +PTF QWA
Sbjct: 296  DVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWA 355

Query: 1401 AAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 1580
            AAAGVDQ TLR+RLNYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRG
Sbjct: 356  AAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRG 415

Query: 1581 AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENG 1760
            AEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEA+KQL TENG
Sbjct: 416  AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLLTENG 475

Query: 1761 RHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLL 1940
            RHP+D EVAEA GLSMKRL+AVMLTPKAPRSLDQKIG N++LKPSEV+ADPEAET+E++L
Sbjct: 476  RHPNDAEVAEAAGLSMKRLAAVMLTPKAPRSLDQKIGFNESLKPSEVLADPEAETSEEIL 535

Query: 1941 IKQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 2120
             KQFMRQDLEKVLD+LNPREKQV+RWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 536  TKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 595

Query: 2121 RKLKNKRRTKHLQQYLVA 2174
            RKLKNK+RTK LQQY+ A
Sbjct: 596  RKLKNKKRTKFLQQYINA 613


>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
            lycopersicum]
          Length = 613

 Score =  718 bits (1853), Expect = 0.0
 Identities = 393/618 (63%), Positives = 445/618 (72%), Gaps = 4/618 (0%)
 Frame = +3

Query: 333  MSCLLPQFKCLPDTFALTFKSHHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXX-LE 509
            MS LLPQF  LPD F +  K+   +  QLSK R+  ++RTQCIL              L 
Sbjct: 1    MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDSIHLRTQCILSTTSAVTSTATSTVLG 60

Query: 510  IEKLRLPSLEPNSNSTT-DGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTYT 686
            IEKL+LPS+E  SNS   + SWK P++ T T V  ++KLKL S +AN   +A  RPWTYT
Sbjct: 61   IEKLQLPSIEILSNSVAAERSWKSPSAAT-TTVPGIQKLKLPSFEANPDSVAPDRPWTYT 119

Query: 687  GATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSK 866
            GA G   E N       E+ + S                           M++   NL  
Sbjct: 120  GAVGPPAEANT----KPEDSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGYNNLKD 175

Query: 867  SDSKETDVPSDANTFMFESIMPYQLAER--VSAIGESKDDEIGLGKSQSSECPLTESDDV 1040
            SD+      S+A T  FES+   Q  E   V    E    E+    S      LT+SDD+
Sbjct: 176  SDNVGRGTLSEARTAPFESVHLAQPGETRGVGVCAELNGSEMKWTGSSLFRDTLTDSDDL 235

Query: 1041 EPTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQ 1220
            EP+       Q+QLS  I V+S                   NVVSVKSGST RK+R+S+Q
Sbjct: 236  EPSHEELEILQSQLSNVIAVKSNRQTERKARRAKAVERAAANVVSVKSGSTSRKKRASVQ 295

Query: 1221 DVDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWA 1400
            DVDYSDPLRYLRGTT SSRLLTA+EE +LS GIQDLLKLERLQVELTERCG +PTF QWA
Sbjct: 296  DVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWA 355

Query: 1401 AAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 1580
            AAAGVDQ TLR+RLNYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRG
Sbjct: 356  AAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRG 415

Query: 1581 AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENG 1760
            AEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL TENG
Sbjct: 416  AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLTENG 475

Query: 1761 RHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLL 1940
            RHP+D EVAEATGLSMKRL+AVMLTPKAPRSLDQK+G N++LKPSEV+ADP+AET+E++L
Sbjct: 476  RHPNDAEVAEATGLSMKRLAAVMLTPKAPRSLDQKVGFNESLKPSEVLADPDAETSEEIL 535

Query: 1941 IKQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 2120
             KQFMRQDLEKVLD+LNPREKQV+RWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 536  TKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 595

Query: 2121 RKLKNKRRTKHLQQYLVA 2174
            RKLKNK+RTK LQQY+ A
Sbjct: 596  RKLKNKKRTKFLQQYINA 613


>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
            sinensis]
          Length = 605

 Score =  715 bits (1846), Expect = 0.0
 Identities = 391/617 (63%), Positives = 447/617 (72%), Gaps = 4/617 (0%)
 Frame = +3

Query: 333  MSCLLPQFKCLPDTFALTFKS---HHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXX 503
            MSCLLPQFKC PDTF++ F++   H H ++  SK +EP   RT C+L             
Sbjct: 24   MSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVL------------- 70

Query: 504  LEIEKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTY 683
                            STT     P TST MT VLD+EKL+L S++A+S+ +AA+R WTY
Sbjct: 71   ----------------STTS----PSTSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTY 110

Query: 684  TGATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLS 863
             GA G S E NLG + ATE L TS                           +M+++ N +
Sbjct: 111  FGAVGPSTEENLGTSLATETL-TSDEAVIAAASAEAVALARAAVKVAKDAALMVNHHNSA 169

Query: 864  KSDSKET-DVPSDANTFMFESIMPYQLAERVSAIGESKDDEIGLGKSQSSECPLTESDDV 1040
            K  SK    + +D NT M+  +      ER S IG+S   E    +  S + PL +S D+
Sbjct: 170  KPKSKPAISLSADTNTSMWAQLTE---RERASIIGDSVIVEAAPEEEYSEQQPLNKSADL 226

Query: 1041 EPTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQ 1220
            EPT       + Q+S +I VRS                   NV+SVKSGST R++R S+Q
Sbjct: 227  EPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTSRRKRPSVQ 286

Query: 1221 DVDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWA 1400
            +VDYSDPLRYLR TTSSSRLLTA EE QLSAGIQDLLKLE L+  L+ERCG  PTFAQWA
Sbjct: 287  EVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWA 346

Query: 1401 AAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 1580
            AAAGVDQ+ LRRRLNYGILCKDKMI SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG
Sbjct: 347  AAAGVDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 406

Query: 1581 AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENG 1760
            AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL++ENG
Sbjct: 407  AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG 466

Query: 1761 RHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLL 1940
            RHP++EEVAEATGLSMKRL AV+LTPKAPRSLDQK GINQNLKPSEVIADPEAETAEDLL
Sbjct: 467  RHPNNEEVAEATGLSMKRLHAVLLTPKAPRSLDQKFGINQNLKPSEVIADPEAETAEDLL 526

Query: 1941 IKQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 2120
            IK+FM++DLEKVLD+LNPRE+QV+RWRFGLEDGRMKTLQEIGELMGVSRERIRQIES AF
Sbjct: 527  IKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAF 586

Query: 2121 RKLKNKRRTKHLQQYLV 2171
            RKLKNK+RTKHL QY +
Sbjct: 587  RKLKNKKRTKHLMQYAI 603


>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  713 bits (1840), Expect = 0.0
 Identities = 389/614 (63%), Positives = 441/614 (71%)
 Frame = +3

Query: 333  MSCLLPQFKCLPDTFALTFKSHHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXXLEI 512
            MSCLLPQFKC PDTF+   K H      LSK RE  Y R QC L                
Sbjct: 1    MSCLLPQFKCPPDTFSTHPKLHI-----LSKNREAIYFRVQCAL---------------- 39

Query: 513  EKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTYTGA 692
                         STT     PP ST+ TAVLD+EKL+L S++++S+ +AA RPWTY G 
Sbjct: 40   -------------STTS----PPLSTSTTAVLDIEKLRLPSLESHSNSVAAHRPWTYIGV 82

Query: 693  TGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSKSD 872
             G   E N  A  A E L+TS                            ++   N +KS+
Sbjct: 83   VGPPTEANFEATLARETLLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSE 142

Query: 873  SKETDVPSDANTFMFESIMPYQLAERVSAIGESKDDEIGLGKSQSSECPLTESDDVEPTT 1052
            +K     S  +T  F  I  +   ER+  +G+S   E G+    S +    +SDD+EPT 
Sbjct: 143  TKPASFLSGDDTSQFRRIQ-FTETERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTL 201

Query: 1053 XXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQDVDY 1232
                  +A+ S +I VRS                    VVSV+SGST R++R S+Q+VDY
Sbjct: 202  EELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSLQEVDY 261

Query: 1233 SDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWAAAAG 1412
            SDPLRYLRGTTS+SRLLTATEE +LS GIQDLLKLE+LQ +L ER G +PTFAQWAAAAG
Sbjct: 262  SDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAG 321

Query: 1413 VDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF 1592
            VDQKTLRRR NYGI CKDKMIKSNIRLVISIAKNYQGAGMN+QDLVQEGCRGLVRGAEKF
Sbjct: 322  VDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKF 381

Query: 1593 DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENGRHPD 1772
            DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL++ENGRHP+
Sbjct: 382  DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPN 441

Query: 1773 DEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLIKQF 1952
            +EEVAEATGLSMKRL+AV+LTPKAPRSLDQKIGINQNLKPSEVIADP+AETAE+LLIKQF
Sbjct: 442  NEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETAEELLIKQF 501

Query: 1953 MRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLK 2132
            MR+DLEKVL+SLNPREKQVIRWR+GLEDGR KTLQEIGELMGVSRERIRQIESCAFRKLK
Sbjct: 502  MREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCAFRKLK 561

Query: 2133 NKRRTKHLQQYLVA 2174
            NKRRTKHLQQYLV+
Sbjct: 562  NKRRTKHLQQYLVS 575


>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
            gi|557539534|gb|ESR50578.1| hypothetical protein
            CICLE_v10030998mg [Citrus clementina]
          Length = 605

 Score =  711 bits (1834), Expect = 0.0
 Identities = 388/617 (62%), Positives = 446/617 (72%), Gaps = 4/617 (0%)
 Frame = +3

Query: 333  MSCLLPQFKCLPDTFALTFKS---HHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXX 503
            MSCLLPQFKC PDTF++ F++   H H ++  SK +EP   RT C+L             
Sbjct: 24   MSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVL------------- 70

Query: 504  LEIEKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTY 683
                            STT     P TST MT VLD+EKL+L S++A+S+ +AA+R WTY
Sbjct: 71   ----------------STTS----PSTSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTY 110

Query: 684  TGATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLS 863
             GA G S E NLG + ATE L TS                           +M+++ N +
Sbjct: 111  FGAVGPSTEENLGTSLATETL-TSDEAVIAAASAEAVALARAAVKVAKDAALMVNHHNSA 169

Query: 864  KSDSKET-DVPSDANTFMFESIMPYQLAERVSAIGESKDDEIGLGKSQSSECPLTESDDV 1040
            K  SK    + +D +T M+  +      ER S IG+S   E    +  S + PL +S D+
Sbjct: 170  KPKSKPAISLSADTSTSMWAQLTE---RERASIIGDSVIVEAAPEEEYSEQQPLNKSADL 226

Query: 1041 EPTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQ 1220
            EPT       + Q+S +I VRS                   NV+SVKSGST R++R S+Q
Sbjct: 227  EPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTTRRKRPSVQ 286

Query: 1221 DVDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWA 1400
            +VDYSDPLRYLR TTSSSRLLTA EE QLSAGIQDLLKLE L+  L+ERCG  PTFAQWA
Sbjct: 287  EVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWA 346

Query: 1401 AAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 1580
            AAAGVDQ+ LRRRLNYGILCKDKMI SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG
Sbjct: 347  AAAGVDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 406

Query: 1581 AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENG 1760
            AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL++ENG
Sbjct: 407  AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG 466

Query: 1761 RHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLL 1940
            RHP++EEVA+ATGLSMKRL AV+L PKAPRSLDQK GINQNLKPSEVIADPEAETAEDLL
Sbjct: 467  RHPNNEEVAKATGLSMKRLHAVLLAPKAPRSLDQKFGINQNLKPSEVIADPEAETAEDLL 526

Query: 1941 IKQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 2120
            IK+FM++DLEKVLD+LNPRE+QV+RWRFGLEDGRMKTLQEIGELMGVSRERIRQIES AF
Sbjct: 527  IKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAF 586

Query: 2121 RKLKNKRRTKHLQQYLV 2171
            RKLKNK+RTKHL QY +
Sbjct: 587  RKLKNKKRTKHLMQYAI 603


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  710 bits (1832), Expect = 0.0
 Identities = 387/614 (63%), Positives = 440/614 (71%)
 Frame = +3

Query: 333  MSCLLPQFKCLPDTFALTFKSHHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXXLEI 512
            MSCLLPQFKC PDTF+   K H     +  K RE  Y R QC L                
Sbjct: 1    MSCLLPQFKCPPDTFSTHPKLH--ILCKSPKNREAIYFRVQCAL---------------- 42

Query: 513  EKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTYTGA 692
                         STT     PP ST+ TAVLD+EKL+L S++++S+ +AA RPWTY G 
Sbjct: 43   -------------STTS----PPLSTSTTAVLDIEKLRLPSLESHSNSVAAHRPWTYIGV 85

Query: 693  TGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSKSD 872
             G   E N  A  A E L+TS                            ++   N +KS+
Sbjct: 86   VGPPTEANFEATLARETLLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSE 145

Query: 873  SKETDVPSDANTFMFESIMPYQLAERVSAIGESKDDEIGLGKSQSSECPLTESDDVEPTT 1052
            +K     S  +T  F  I  +   ER+  +G+S   E G+    S +    +SDD+EPT 
Sbjct: 146  TKPASFLSGDDTSQFRRIQ-FTETERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTL 204

Query: 1053 XXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQDVDY 1232
                  +A+ S +I VRS                    VVSV+SGST R++R S+Q+VDY
Sbjct: 205  EELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSLQEVDY 264

Query: 1233 SDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWAAAAG 1412
            SDPLRYLRGTTS+SRLLTATEE +LS GIQDLLKLE+LQ +L ER G +PTFAQWAAAAG
Sbjct: 265  SDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAG 324

Query: 1413 VDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF 1592
            VDQKTLRRR NYGI CKDKMIKSNIRLVISIAKNYQGAGMN+QDLVQEGCRGLVRGAEKF
Sbjct: 325  VDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKF 384

Query: 1593 DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENGRHPD 1772
            DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL++ENGRHP+
Sbjct: 385  DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPN 444

Query: 1773 DEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLIKQF 1952
            +EEVAEATGLSMKRL+AV+LTPKAPRSLDQKIGINQNLKPSEVIADP+AETAE+LLIKQF
Sbjct: 445  NEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETAEELLIKQF 504

Query: 1953 MRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLK 2132
            MR+DLEKVL+SLNPREKQVIRWR+GLEDGR KTLQEIGELMGVSRERIRQIESCAFRKLK
Sbjct: 505  MREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCAFRKLK 564

Query: 2133 NKRRTKHLQQYLVA 2174
            NKRRTKHLQQYLV+
Sbjct: 565  NKRRTKHLQQYLVS 578


>gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 574

 Score =  687 bits (1773), Expect = 0.0
 Identities = 377/618 (61%), Positives = 435/618 (70%), Gaps = 4/618 (0%)
 Frame = +3

Query: 333  MSCLLPQFKCLPDTFALTFKSHHHSA----TQLSKGREPEYIRTQCILXXXXXXXXXXXX 500
            MSCLLPQF C PDTF+  F    HS     + L K R+   +  QC+L            
Sbjct: 1    MSCLLPQFNCKPDTFSAQFNFRTHSLPTPNSHLPKARDINSL-AQCVL------------ 47

Query: 501  XLEIEKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWT 680
                             STT     P TS   T VL +EKL+  S+DANS  + ++RPWT
Sbjct: 48   -----------------STTS----PSTSVGATYVLSVEKLRFPSLDANSESVTSNRPWT 86

Query: 681  YTGATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNL 860
            YTGATG  +E N  A  ATE L+TS                           +++     
Sbjct: 87   YTGATGPPVEANFEATLATETLLTSEEAVIAAAAAEAVTLAKAAVKVAKDAALLVRPSTR 146

Query: 861  SKSDSKETDVPSDANTFMFESIMPYQLAERVSAIGESKDDEIGLGKSQSSECPLTESDDV 1040
            ++S S    V S+A           + A+  S + +S   E+ L +    +    ES+D+
Sbjct: 147  AESISL---VSSEARNI--------KTAQAASRVRDSLRAEMALIEDHPPKDAAKESNDL 195

Query: 1041 EPTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQ 1220
            +PT       Q QLS +I VRS                   NVV+VKSGS  RK+R+S+Q
Sbjct: 196  QPTNEELRILQEQLSKSIAVRSRRQSERKAKRDRAAEKAAANVVAVKSGSNSRKKRASVQ 255

Query: 1221 DVDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWA 1400
            DVD+SDPLRYLR TTS+SRLLTATEE +LS GIQDLLKLE+LQ EL ERCG  PTFAQWA
Sbjct: 256  DVDHSDPLRYLRSTTSTSRLLTATEEIELSEGIQDLLKLEKLQEELAERCGGPPTFAQWA 315

Query: 1401 AAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 1580
            AAAGVDQKTLRRR+NYGILCKDKMIKSN+RLVISIAKNYQGAGMNLQDLVQEGCRGLVRG
Sbjct: 316  AAAGVDQKTLRRRINYGILCKDKMIKSNVRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 375

Query: 1581 AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENG 1760
            AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL++ENG
Sbjct: 376  AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG 435

Query: 1761 RHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLL 1940
            R P+DEEVAEATGLSMKRL+AV+LTPKAPRSL+QKIGINQNLKPSE+IADP+AET ED+L
Sbjct: 436  RQPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSEIIADPDAETLEDVL 495

Query: 1941 IKQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 2120
             +QFM+QDL+KVLDSLN REKQVIRWRFG++DGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 496  TRQFMKQDLDKVLDSLNQREKQVIRWRFGMDDGRMKTLQEIGELMGVSRERIRQIESCAF 555

Query: 2121 RKLKNKRRTKHLQQYLVA 2174
            RKLKNK+RTKHLQQYL++
Sbjct: 556  RKLKNKKRTKHLQQYLIS 573


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
            gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
            rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  679 bits (1752), Expect = 0.0
 Identities = 378/617 (61%), Positives = 434/617 (70%), Gaps = 3/617 (0%)
 Frame = +3

Query: 333  MSCLLPQFKCLPDTFALTFKS---HHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXX 503
            MSCLLPQFKC PDTF++ F++   H  + TQ +K REP Y R QCIL             
Sbjct: 2    MSCLLPQFKCQPDTFSIHFRANYFHFSNVTQSTKSREPIYYRAQCIL------------- 48

Query: 504  LEIEKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTY 683
                            STT  S       T TAVLD+EKL+L S +A S  IA + PWTY
Sbjct: 49   ----------------STTSPS-------TSTAVLDLEKLRLPSFEAPSDSIAPNSPWTY 85

Query: 684  TGATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLS 863
                        G+  ATE LITS                           +++ N   +
Sbjct: 86   A---------TFGSTLATETLITSDEAVIAAAAAEAVALARAAVKVAKDAALLVKNFPSA 136

Query: 864  KSDSKETDVPSDANTFMFESIMPYQLAERVSAIGESKDDEIGLGKSQSSECPLTESDDVE 1043
            +++SK T  PS  +   +     +   ER   IG+S   E G  +  S +  + ESD +E
Sbjct: 137  ETESKLTS-PSTIDASRWPQ---FTETERARIIGDSVATETGPREESSMQSSIKESDYLE 192

Query: 1044 PTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQD 1223
             T       Q QLS  I VRS                   +VVSVK GST +K+R S+Q+
Sbjct: 193  LTHKELELLQKQLSEGIAVRSRRQTERKARRARAVEKAASSVVSVKPGSTSKKKRGSLQE 252

Query: 1224 VDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWAA 1403
            VDYSDPLRYLRGTTS+SRLLTA+EE +LSA IQDLLKLERLQ EL ER G +PTFAQWAA
Sbjct: 253  VDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLLKLERLQEELAERYGGQPTFAQWAA 312

Query: 1404 AAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA 1583
            AAGVDQ+TLR+R+N+G +CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA
Sbjct: 313  AAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA 372

Query: 1584 EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENGR 1763
            EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL++ENGR
Sbjct: 373  EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR 432

Query: 1764 HPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLI 1943
            HPDDEEVAEA GLSMKRLSAV+LTPKAPRSLDQKIG+N +LKPSEVIADPEAETAE+LL+
Sbjct: 433  HPDDEEVAEAAGLSMKRLSAVLLTPKAPRSLDQKIGMNMDLKPSEVIADPEAETAEELLM 492

Query: 1944 KQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFR 2123
            KQFM+QDLEKVL++LNPRE QV+RWRFGLEDGRMKTLQEIGE+MGVSRERIRQIES AFR
Sbjct: 493  KQFMKQDLEKVLNTLNPRETQVVRWRFGLEDGRMKTLQEIGEIMGVSRERIRQIESSAFR 552

Query: 2124 KLKNKRRTKHLQQYLVA 2174
            KLKNK+RTK L+QYL+A
Sbjct: 553  KLKNKKRTKQLKQYLLA 569


>ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cucumis sativus]
            gi|449473951|ref|XP_004154029.1| PREDICTED: RNA
            polymerase sigma factor sigB-like [Cucumis sativus]
          Length = 580

 Score =  673 bits (1736), Expect = 0.0
 Identities = 374/629 (59%), Positives = 438/629 (69%), Gaps = 15/629 (2%)
 Frame = +3

Query: 333  MSCLLPQFKCLPDTFALTFK-----SHHHSA-----TQLSKGREPEYIRTQCILXXXXXX 482
            MSCLLPQFKC P+TF++ FK     SHHHS      +  +K R+P  +RTQCIL      
Sbjct: 1    MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCIL------ 54

Query: 483  XXXXXXXLEIEKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIA 662
                                        +  PPTST     LD+++LKL   D N+  ++
Sbjct: 55   ---------------------------SAASPPTSTGTATTLDVDRLKLPPFDTNTDSVS 87

Query: 663  ASRPWTYTGATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMM 842
              R  +Y GA  +S+ + L         +TS                           ++
Sbjct: 88   VERLRSYLGAVESSLASTL---------LTSEEASIAAAAAEAVTLAKAAVKVARDAALL 138

Query: 843  ISNGNLSKSDSKETDVPS-DANTFMFESIMPYQLAERVSAIGESKDDEIGLGK----SQS 1007
             +N N S++ +K    P  DA  F +   M    +ER   IGE     +G+ K      +
Sbjct: 139  ANNINSSRAGTKSQSSPKPDALHFKWAQFME---SERADIIGEP----VGVNKRPMEGDA 191

Query: 1008 SECPLTESDDVEPTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSG 1187
             E   TESDD+EPT+      Q +LS +ITV+S                   +V+S KSG
Sbjct: 192  LEPSTTESDDMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSG 251

Query: 1188 STVRKRRSSIQDVDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTER 1367
            S+ RK+R+S+Q+VDYSDPLRYLR TT++SRLLTATEE +LS GIQDLLKLERLQ EL ER
Sbjct: 252  SSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLKLERLQEELGER 311

Query: 1368 CGAEPTFAQWAAAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDL 1547
             G EPTFAQWAAAAGV+Q+TLR+RLNYG LCKDKMIKSNIRLVISIAKNYQGAGMNLQDL
Sbjct: 312  YGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDL 371

Query: 1548 VQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVK 1727
            VQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATYRVK
Sbjct: 372  VQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVK 431

Query: 1728 EAKKQLFTENGRHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIA 1907
            EA+KQL  ENGRHPDD+E+AEA GLSMKRL+AV++TPKAPRSL+QKIGINQNLKPSEVI+
Sbjct: 432  EARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVIS 491

Query: 1908 DPEAETAEDLLIKQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSR 2087
            DPEAET ED+LIKQFM+QDLEKVLDSLNPREKQVIRWRFG+EDGRMKTLQEIGE+MGVSR
Sbjct: 492  DPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSR 551

Query: 2088 ERIRQIESCAFRKLKNKRRTKHLQQYLVA 2174
            ERIRQIESCAFRKLKNK+RTKHLQQY+++
Sbjct: 552  ERIRQIESCAFRKLKNKKRTKHLQQYVMS 580


>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Citrus
            sinensis]
          Length = 525

 Score =  672 bits (1733), Expect = 0.0
 Identities = 359/527 (68%), Positives = 407/527 (77%), Gaps = 1/527 (0%)
 Frame = +3

Query: 594  MTAVLDMEKLKLLSVDANSSLIAASRPWTYTGATGTSMETNLGAAFATENLITSXXXXXX 773
            MT VLD+EKL+L S++A+S+ +AA+R WTY GA G S E NLG + ATE L TS      
Sbjct: 1    MTTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETL-TSDEAVIA 59

Query: 774  XXXXXXXXXXXXXXXXXXXXXMMISNGNLSKSDSKET-DVPSDANTFMFESIMPYQLAER 950
                                 +M+++ N +K  SK    + +D NT M+  +      ER
Sbjct: 60   AASAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTNTSMWAQLTE---RER 116

Query: 951  VSAIGESKDDEIGLGKSQSSECPLTESDDVEPTTXXXXXXQAQLSVNITVRSXXXXXXXX 1130
             S IG+S   E    +  S + PL +S D+EPT       + Q+S +I VRS        
Sbjct: 117  ASIIGDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKA 176

Query: 1131 XXXXXXXXXXXNVVSVKSGSTVRKRRSSIQDVDYSDPLRYLRGTTSSSRLLTATEEHQLS 1310
                       NV+SVKSGST R++R S+Q+VDYSDPLRYLR TTSSSRLLTA EE QLS
Sbjct: 177  RRTRAAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLS 236

Query: 1311 AGIQDLLKLERLQVELTERCGAEPTFAQWAAAAGVDQKTLRRRLNYGILCKDKMIKSNIR 1490
            AGIQDLLKLE L+  L+ERCG  PTFAQWAAAAGVDQ+ LRRRLNYGILCKDKMI SNIR
Sbjct: 237  AGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIR 296

Query: 1491 LVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD 1670
            LVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD
Sbjct: 297  LVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD 356

Query: 1671 QSRTIRLPFHMVEATYRVKEAKKQLFTENGRHPDDEEVAEATGLSMKRLSAVMLTPKAPR 1850
            QSRTIRLPFHMVEATYRVKEA+KQL++ENGRHP++EEVAEATGLSMKRL AV+LTPKAPR
Sbjct: 357  QSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPR 416

Query: 1851 SLDQKIGINQNLKPSEVIADPEAETAEDLLIKQFMRQDLEKVLDSLNPREKQVIRWRFGL 2030
            SLDQK GINQNLKPSEVIADPEAETAEDLLIK+FM++DLEKVLD+LNPRE+QV+RWRFGL
Sbjct: 417  SLDQKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGL 476

Query: 2031 EDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLV 2171
            EDGRMKTLQEIGELMGVSRERIRQIES AFRKLKNK+RTKHL QY +
Sbjct: 477  EDGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAI 523


>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-like [Fragaria vesca
            subsp. vesca]
          Length = 616

 Score =  668 bits (1723), Expect = 0.0
 Identities = 353/543 (65%), Positives = 408/543 (75%), Gaps = 1/543 (0%)
 Frame = +3

Query: 549  NSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTYTGATGTSMETNLGAA 728
            +S+T  S   PT+T    +LDME+  L S+  NS  +  +RPWTYTGA G   E N GAA
Sbjct: 81   SSSTSHSTSTPTAT----LLDMEEFSLPSLTVNSDSLIVNRPWTYTGAIGPPTEANYGAA 136

Query: 729  FATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSKSDSKETDVPSDANT 908
             ATE L+TS                           +++SN + +K ++     P    T
Sbjct: 137  LATETLLTSEEAVIAAAAAEAVTLAKAALKVAKDVALLVSNNHYAKVENSS---PVSCGT 193

Query: 909  FMFESIMPYQL-AERVSAIGESKDDEIGLGKSQSSECPLTESDDVEPTTXXXXXXQAQLS 1085
              F       L  E    IG+S   E  L +    +  + ES++VEP        Q QLS
Sbjct: 194  SAFHINWAQHLETEPTLRIGDSMASETALVEDHFLQIAINESENVEPANEEFELLQEQLS 253

Query: 1086 VNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQDVDYSDPLRYLRGTT 1265
              I  RS                   ++VSVKSGST RK+R+S+QDVD+SDPLRYLR TT
Sbjct: 254  NGIAARSSRQTERKARRTRAAEKAAASIVSVKSGSTSRKKRASLQDVDHSDPLRYLRATT 313

Query: 1266 SSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWAAAAGVDQKTLRRRLN 1445
             +SRLLTA EE +LS GIQ+LLKLE+LQ +L +RCG +PTFAQWAAAAGVDQKTLR+R+N
Sbjct: 314  HTSRLLTANEEIELSEGIQELLKLEKLQEDLAQRCGTQPTFAQWAAAAGVDQKTLRKRVN 373

Query: 1446 YGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY 1625
            YGI+CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY
Sbjct: 374  YGIMCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY 433

Query: 1626 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENGRHPDDEEVAEATGLS 1805
            AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EAKKQL++ NGRHP+DEEVAEATGLS
Sbjct: 434  AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSVNGRHPNDEEVAEATGLS 493

Query: 1806 MKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLIKQFMRQDLEKVLDS 1985
            MKRL+AV+LTPKAPRSL+QKIGINQNLKPS+VIADP+AETAEDLL+K+FM+QDLEKVLDS
Sbjct: 494  MKRLAAVLLTPKAPRSLEQKIGINQNLKPSDVIADPDAETAEDLLMKKFMKQDLEKVLDS 553

Query: 1986 LNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQY 2165
            LNPREKQVIRWRFG+EDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNK+RTKHLQQY
Sbjct: 554  LNPREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQY 613

Query: 2166 LVA 2174
            +++
Sbjct: 614  VLS 616


>ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trichocarpa]
            gi|550325142|gb|EEE95669.2| SIGMA FACTOR B family protein
            [Populus trichocarpa]
          Length = 567

 Score =  644 bits (1661), Expect = 0.0
 Identities = 356/615 (57%), Positives = 416/615 (67%), Gaps = 1/615 (0%)
 Frame = +3

Query: 333  MSCLLPQFKCLPDTFALTFKSHHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXXLEI 512
            MSCLLPQFKC PDTF++ F++  H  T  ++         QC+L                
Sbjct: 1    MSCLLPQFKCQPDTFSVHFRNLQHHGTNHTQ-------LPQCVLS--------------- 38

Query: 513  EKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTYTGA 692
                                   +++  TAVLD+EKL+L S++ +S  I+A+RPWTY G 
Sbjct: 39   -----------------------SASPSTAVLDLEKLRLPSLEPHSDSISANRPWTYIGG 75

Query: 693  TGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSKSD 872
             G   +   G + A E LI +                            M  N +  K  
Sbjct: 76   IGPQKKPPFGTSLAAETLIANDEAVIAAAAAEAVALARAAVKVAKDAAEMAKNYSFMK-- 133

Query: 873  SKETDVPSDANTFMFESIMPYQLA-ERVSAIGESKDDEIGLGKSQSSECPLTESDDVEPT 1049
             KET +P  + T  F S+       ER   IG+S   E  L +  S + P  E D +EPT
Sbjct: 134  -KETKIPIASTTDSFSSMWSLLTEKERADIIGDSVSAETRLREEYSVQYPTEEYDCLEPT 192

Query: 1050 TXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQDVD 1229
                   Q QLS  I VRS                   NVVSVKSGST +K+R  +Q+VD
Sbjct: 193  QEELALLQKQLSEGIAVRSKRQTERKARRARAAEKAAANVVSVKSGSTSKKKRVPLQEVD 252

Query: 1230 YSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWAAAA 1409
             SDPLR+ RG +SSSRLL+ATEE +LS GIQDLLKLER++ EL ER G EP+FAQWAAAA
Sbjct: 253  QSDPLRFFRGASSSSRLLSATEEVELSEGIQDLLKLERIEEELKERFGGEPSFAQWAAAA 312

Query: 1410 GVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEK 1589
            GVDQ TLR+RLNYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEK
Sbjct: 313  GVDQLTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGTGMNLQDLVQEGCRGLVRGAEK 372

Query: 1590 FDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENGRHP 1769
            FDASKGFKFSTYAHWWIKQAVRKSLSD+SRTIRLPFHMV+ATYRVKEA+KQL++ENGRHP
Sbjct: 373  FDASKGFKFSTYAHWWIKQAVRKSLSDRSRTIRLPFHMVDATYRVKEARKQLYSENGRHP 432

Query: 1770 DDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLIKQ 1949
            DD+EVAEA GLSMKRLSAV+LTPKAPRSLDQK+G N +LK SEV ADPEAETAEDLL+K+
Sbjct: 433  DDKEVAEAAGLSMKRLSAVLLTPKAPRSLDQKMGFNMDLKLSEVTADPEAETAEDLLMKE 492

Query: 1950 FMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKL 2129
            FM++DL KVL SL+PRE QV+RWRFG+EDGRMKTLQEIGELMGVSRER+RQIE  AFRKL
Sbjct: 493  FMKKDLAKVLGSLSPRENQVVRWRFGMEDGRMKTLQEIGELMGVSRERVRQIELSAFRKL 552

Query: 2130 KNKRRTKHLQQYLVA 2174
            KNK RTK L+QY+VA
Sbjct: 553  KNKNRTKQLRQYMVA 567


>ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
            gi|482575837|gb|EOA40024.1| hypothetical protein
            CARUB_v10008711mg [Capsella rubella]
          Length = 571

 Score =  622 bits (1604), Expect = e-175
 Identities = 347/615 (56%), Positives = 413/615 (67%), Gaps = 2/615 (0%)
 Frame = +3

Query: 336  SCLLPQFKCLPDTFALTFKSHHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXXLEIE 515
            SCLLPQFKC PD+F++ F++   S ++ +KG  P + + QC +                 
Sbjct: 3    SCLLPQFKCQPDSFSIHFRTSF-SVSKQNKG--PVFFQPQCAVTTS-------------- 45

Query: 516  KLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTYTGAT 695
                P+L                   +T+ LD+ KL+L S D +S    + R WTYTG  
Sbjct: 46   ----PAL-------------------LTSTLDVAKLRLPSFDTDSDSRISDRQWTYTGTV 82

Query: 696  GTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSKSDS 875
            G S E     A A+E L+TS                           +  ++ N +   S
Sbjct: 83   GPSTEAKYLEALASETLLTSDEAVVAAAAAEAVALARAAVKVAKDATLFKNSNNTNLLIS 142

Query: 876  KETDVPSDANTFMFESIMPYQLAERVSAIGESKDDEIGL--GKSQSSECPLTESDDVEPT 1049
               D  S  + F  +        ER   +G     + G+   KS +       S D+   
Sbjct: 143  STADKRSKWDQFTEK--------ERAGILGHLAVSDTGIVSDKSTAPASNKESSADLISE 194

Query: 1050 TXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQDVD 1229
                   + Q + ++ VRS                    + SVK+GS+ RK+R   Q+VD
Sbjct: 195  IQEVELVEEQPAASLAVRSTRQTERKARRAKGLEKSASAIPSVKTGSSPRKKRVVAQEVD 254

Query: 1230 YSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWAAAA 1409
            ++DPLRYLR TTSSS+LLT  EEH+LSAGIQDLLKLERLQ ELTERCG +PTF+QWA+AA
Sbjct: 255  HNDPLRYLRVTTSSSKLLTVREEHELSAGIQDLLKLERLQAELTERCGRQPTFSQWASAA 314

Query: 1410 GVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEK 1589
            GVDQK+LR+R+NYG  CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEK
Sbjct: 315  GVDQKSLRKRINYGTQCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEK 374

Query: 1590 FDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENGRHP 1769
            FDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEA+KQL+TE GRHP
Sbjct: 375  FDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYTEKGRHP 434

Query: 1770 DDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLIKQ 1949
            ++EEVAEATGLSMKRL AV+L+PK PRSLDQKIG+NQNLKPSEVIADPEAET+ED+LIKQ
Sbjct: 435  ENEEVAEATGLSMKRLMAVLLSPKPPRSLDQKIGMNQNLKPSEVIADPEAETSEDILIKQ 494

Query: 1950 FMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKL 2129
            FMR+DL+KVLDSL  REKQVIRWRFG+EDGRMKTLQEIGELMGVSRER+RQIES AFRKL
Sbjct: 495  FMREDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERVRQIESSAFRKL 554

Query: 2130 KNKRRTKHLQQYLVA 2174
            KNK+R+ HLQQYLVA
Sbjct: 555  KNKKRSNHLQQYLVA 569


>ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutrema salsugineum]
            gi|557095448|gb|ESQ36030.1| hypothetical protein
            EUTSA_v10007187mg [Eutrema salsugineum]
          Length = 579

 Score =  618 bits (1593), Expect = e-174
 Identities = 349/625 (55%), Positives = 415/625 (66%), Gaps = 12/625 (1%)
 Frame = +3

Query: 336  SCLLPQFKCLPDTFALTFKSHHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXXLEIE 515
            SCLLPQFKC PD+F++ FK+ + S ++ +KG    + + QC +                 
Sbjct: 3    SCLLPQFKCQPDSFSIHFKTSY-SLSKHNKGSV--FFQPQCAV----------------- 42

Query: 516  KLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTYTGAT 695
                             S  PP  T+M   LD+ KL+L S D +S    + R WTYTG  
Sbjct: 43   -----------------STSPPLLTSM---LDVAKLRLPSFDTDSDSRISDRQWTYTGTV 82

Query: 696  GTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSKSDS 875
            G S E     A A+E L+TS                              ++ N     S
Sbjct: 83   GPSTEAKYLEALASETLLTSDEAVVAAAAAEAVALARAAVKVAKDATSFRNSYNTKVVVS 142

Query: 876  KETDVPSDANTFMFESIMPYQLAERVSAIGESKDDEIGLGKSQSS------------ECP 1019
               D  S  + F  +        ER   +G     + G+   +S+            +C 
Sbjct: 143  SAADKRSKWDQFTEK--------ERAGILGHLAVSDTGVVSDKSTAPAPAPAPAPAPDCN 194

Query: 1020 LTESDDVEPTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVR 1199
               S D++         + QLSV+  VRS                   ++ SVK+GS+ R
Sbjct: 195  NESSGDLKSEKQEVELLEEQLSVSSAVRSTRQTERKARRAKGLEKTASSMQSVKTGSSSR 254

Query: 1200 KRRSSIQDVDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAE 1379
            K+R+  Q+VD++DPLRYLR TTSSS+LLTA EE +LS GIQDLLKLERLQ ELTERCG +
Sbjct: 255  KKRAPSQEVDHNDPLRYLRMTTSSSKLLTAREEQELSEGIQDLLKLERLQAELTERCGHQ 314

Query: 1380 PTFAQWAAAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEG 1559
            PTFAQWA+AAGVDQK+LR+R+NYG  CKD+MIKSNIRLVISIAKNYQGAGMNLQDLVQEG
Sbjct: 315  PTFAQWASAAGVDQKSLRKRINYGTQCKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQEG 374

Query: 1560 CRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKK 1739
            CRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEA+K
Sbjct: 375  CRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARK 434

Query: 1740 QLFTENGRHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEA 1919
            QL++E G+ P++EEVAEATGLSMKRL AV+L+PK PRSLDQKIGINQNLKPSEVIADPEA
Sbjct: 435  QLYSETGKQPENEEVAEATGLSMKRLMAVLLSPKPPRSLDQKIGINQNLKPSEVIADPEA 494

Query: 1920 ETAEDLLIKQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIR 2099
            ET+ED+LIKQFMRQDL+KVLDSL+ REKQVIRWRFG+EDGRMKTLQEIGE MGVSRER+R
Sbjct: 495  ETSEDILIKQFMRQDLDKVLDSLSTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVR 554

Query: 2100 QIESCAFRKLKNKRRTKHLQQYLVA 2174
            QIES AFRKLKNK+R+ HLQQYLVA
Sbjct: 555  QIESSAFRKLKNKKRSNHLQQYLVA 579


>emb|CAD20831.2| sigma factor [Spinacia oleracea]
          Length = 575

 Score =  617 bits (1592), Expect = e-174
 Identities = 349/616 (56%), Positives = 413/616 (67%), Gaps = 4/616 (0%)
 Frame = +3

Query: 333  MSCLLPQFKCLPDTFALTFKSH----HHSATQLSKGREPEYIRTQCILXXXXXXXXXXXX 500
            M+CLLPQFKC PDTF+++   H      SAT L + R+    R QC +            
Sbjct: 1    MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAV------------ 48

Query: 501  XLEIEKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWT 680
                      S  P           PPT+   T++ D+EKL+L  V++NS+ ++A    T
Sbjct: 49   ----------STPP-----------PPTAAAETSIFDVEKLRLPYVESNSNSLSAFAQST 87

Query: 681  YTGATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNL 860
            +    G+  E     A   + LI +                           +M  N   
Sbjct: 88   FLSTLGSPAEVKFDTALTAKLLIENEEAVIAAAAAEAVALARAAAKLAKDAALMAFNSQP 147

Query: 861  SKSDSKETDVPSDANTFMFESIMPYQLAERVSAIGESKDDEIGLGKSQSSECPLTESDDV 1040
            +K  SK      +  +  F      QL E    +G  ++ E G   S      ++E  D+
Sbjct: 148  TKPVSK-----LEGQSLHFSGA---QLLEN-EQVGSMRNFE-GSENSLREGDTVSEPADM 197

Query: 1041 EPTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQ 1220
            EPT       + +L  +ITVRS                   NVVSVK GS  RK+R+S+Q
Sbjct: 198  EPTIEELQLLEVELDESITVRSTRQGERKARRARAAEKVASNVVSVKVGSNSRKKRTSVQ 257

Query: 1221 DVDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWA 1400
            +VDYSDPLRYLRG T+SSRLLT++EE +LSAGIQDLLKLE+L  EL  R G  P+F QWA
Sbjct: 258  EVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGKSPSFVQWA 317

Query: 1401 AAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 1580
            AAAG+DQ+TLRRRLN+G  CKDKMIKSN+RLVISIAKNYQG+GMNLQDLVQEGCRGLVRG
Sbjct: 318  AAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRG 377

Query: 1581 AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENG 1760
            AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL +ENG
Sbjct: 378  AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENG 437

Query: 1761 RHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLL 1940
            + P++EEVAEATGLSMKRL+AV++TPKAPRSLDQKIG N NLKPSEVIADPEAETAEDLL
Sbjct: 438  KQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLL 497

Query: 1941 IKQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 2120
             KQFMRQDLEKVLD+L+ REKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIES AF
Sbjct: 498  TKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAF 557

Query: 2121 RKLKNKRRTKHLQQYL 2168
            RKL+NK++T +LQQY+
Sbjct: 558  RKLQNKKKTINLQQYM 573


>ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
            gi|548831956|gb|ERM94758.1| hypothetical protein
            AMTR_s00011p00258380 [Amborella trichopoda]
          Length = 570

 Score =  613 bits (1581), Expect = e-172
 Identities = 325/532 (61%), Positives = 396/532 (74%), Gaps = 2/532 (0%)
 Frame = +3

Query: 585  STTMTAVLDMEKLKLLSVDANSSLIAASRPWTYTGATGTSMETNLGAAFATENLITSXXX 764
            S+T T V+D++K+++ S+  +S+ ++   P TY G  G+  +T+  AA  TE+L+ S   
Sbjct: 40   SSTATVVVDVDKVRVPSLGGHSTSVSTHGPLTYVGTIGSQKKTDFEAALVTESLLKSEEA 99

Query: 765  XXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSKSDSKETDVPSDANTFMFESIMPYQLA 944
                                    +M+ +   S+SD K  D PS+A+    +     ++ 
Sbjct: 100  IIAAAAAEAIALAKAAAKLAKDAALMVGSVPPSRSD-KVDDFPSEADILRLQRARLTEM- 157

Query: 945  ERVSAIGESKDDEIGLGKSQSSECPLTESD--DVEPTTXXXXXXQAQLSVNITVRSXXXX 1118
            ER+ ++  S    IG      S   L+ ++  D +         Q Q S  + VRS    
Sbjct: 158  ERIGSMDGSSIAGIGPRDKHKSVNQLSPNEMADKQSRENILEALQLQHSQRVAVRSRRQT 217

Query: 1119 XXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQDVDYSDPLRYLRGTTSSSRLLTATEE 1298
                           N ++VK G+T R++R+ +Q++DYSDPLRYLRGTT+S++LLTATEE
Sbjct: 218  ERRARRAKGVEKAAANAITVKLGTTSRRKRAPLQEIDYSDPLRYLRGTTNSTKLLTATEE 277

Query: 1299 HQLSAGIQDLLKLERLQVELTERCGAEPTFAQWAAAAGVDQKTLRRRLNYGILCKDKMIK 1478
             +LS GIQDLLKLE+L  ELTER G EPTF QWAAAAG+DQK LRRRL+YG  CKDKMIK
Sbjct: 278  LELSEGIQDLLKLEKLHKELTERFGGEPTFVQWAAAAGIDQKALRRRLSYGTHCKDKMIK 337

Query: 1479 SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK 1658
            SNIRLVISIAKNYQG G+++QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK
Sbjct: 338  SNIRLVISIAKNYQGVGLSIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK 397

Query: 1659 SLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENGRHPDDEEVAEATGLSMKRLSAVMLTP 1838
            SLSDQSRTIRLPFHMV+ATYRV+EA KQL++ENGRHP+DEEVAEATGLSMKRL+ V+LTP
Sbjct: 398  SLSDQSRTIRLPFHMVDATYRVREATKQLYSENGRHPNDEEVAEATGLSMKRLTTVLLTP 457

Query: 1839 KAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLIKQFMRQDLEKVLDSLNPREKQVIRW 2018
            KAPRSLDQKIGINQNLKPSEVI+DPEAETAEDLL+KQFM+QDLEKVL++LNPREKQV+RW
Sbjct: 458  KAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLMKQFMKQDLEKVLNTLNPREKQVVRW 517

Query: 2019 RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLVA 2174
            RFGLEDGRMKTLQEIGELMGVSRERIRQIES AFRKLKNK+RTK+L+QYL++
Sbjct: 518  RFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKNLRQYLLS 569


>ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Populus trichocarpa]
            gi|550316911|gb|EEE99836.2| hypothetical protein
            POPTR_0019s06100g [Populus trichocarpa]
          Length = 555

 Score =  612 bits (1577), Expect = e-172
 Identities = 332/530 (62%), Positives = 386/530 (72%), Gaps = 1/530 (0%)
 Frame = +3

Query: 588  TTMTAVLDMEKLKLLSVDANSSLIAASRPWTYTGATGTSMETNLGAAFATENLITSXXXX 767
            +T TAVL++EKL+L S++++S  IAA+RPWTY G  G   E   G + ATE LI +    
Sbjct: 29   STSTAVLNLEKLRLPSLESHSDSIAANRPWTYIGGIGPPKEPLFGTSLATETLIINDEAV 88

Query: 768  XXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSKSDSKETDVPSDANTFMFESIMPYQLA- 944
                                    M  N     S + ET +P  +    F S+       
Sbjct: 89   IAAAAAEAVALARAAVKVAKDAAEMAKN---YCSVNTETKIPIASTADSFSSMWCLLTGK 145

Query: 945  ERVSAIGESKDDEIGLGKSQSSECPLTESDDVEPTTXXXXXXQAQLSVNITVRSXXXXXX 1124
            ER   IG S   E GL +  S++ P  ESD   PT       + QLS +I VRS      
Sbjct: 146  ERADIIGVSFSAETGLREECSTQYPTEESDCFGPTHEELALLEKQLSESIVVRSKRQTQR 205

Query: 1125 XXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQDVDYSDPLRYLRGTTSSSRLLTATEEHQ 1304
                         N V +KSGS  +K+R  +Q+VD SDPLR+ RG ++SSRLL+ATEE +
Sbjct: 206  KAKRARAAEKAAANFVFMKSGSACKKKRVPVQEVDQSDPLRFFRGASTSSRLLSATEEVE 265

Query: 1305 LSAGIQDLLKLERLQVELTERCGAEPTFAQWAAAAGVDQKTLRRRLNYGILCKDKMIKSN 1484
            LS GIQDLLKLER++ EL ER G +PTFAQWAAAA VDQ TLR+RLNY ILCKDKMIKSN
Sbjct: 266  LSEGIQDLLKLERIEEELKERFGGKPTFAQWAAAARVDQITLRKRLNYAILCKDKMIKSN 325

Query: 1485 IRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSL 1664
            IRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWI+QAVR+SL
Sbjct: 326  IRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGVEKFDASKGFKFSTYAHWWIRQAVRRSL 385

Query: 1665 SDQSRTIRLPFHMVEATYRVKEAKKQLFTENGRHPDDEEVAEATGLSMKRLSAVMLTPKA 1844
            SDQSRTIRLPFHMV+ATYRVKEA+KQ ++ENGRHPDD+EVAEATGLSMKRLSAV+LTPKA
Sbjct: 386  SDQSRTIRLPFHMVDATYRVKEARKQFYSENGRHPDDKEVAEATGLSMKRLSAVLLTPKA 445

Query: 1845 PRSLDQKIGINQNLKPSEVIADPEAETAEDLLIKQFMRQDLEKVLDSLNPREKQVIRWRF 2024
            PRSLDQK+G N +LK SEV ADPEAETAEDLL+K+FM++DLE+VL+SL+PRE QVIRWRF
Sbjct: 446  PRSLDQKMGFNMDLKLSEVTADPEAETAEDLLMKEFMKKDLERVLESLSPRENQVIRWRF 505

Query: 2025 GLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLVA 2174
            G+EDGRMKTLQEIGELMGVSRERIRQIE  AFRKLKNK RTK L+QYLV+
Sbjct: 506  GMEDGRMKTLQEIGELMGVSRERIRQIELSAFRKLKNKNRTKQLRQYLVS 555


>gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus persica]
          Length = 401

 Score =  612 bits (1577), Expect = e-172
 Identities = 311/398 (78%), Positives = 346/398 (86%)
 Frame = +3

Query: 981  EIGLGKSQSSECPLTESDDVEPTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXX 1160
            E  L ++   +  + ES+DVE T       + QLS  IT RS                  
Sbjct: 4    ETALVENHFIQVAIKESEDVESTNQEFELLREQLSEGITARSSRQIERKARRAKAAEKAA 63

Query: 1161 XNVVSVKSGSTVRKRRSSIQDVDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLE 1340
             +VVSVKSGST RK+R+S+QDVD+SDPLRYLR TT +SRLLTA EE +LS GIQ+LLKLE
Sbjct: 64   ASVVSVKSGSTSRKKRASLQDVDHSDPLRYLRATTHTSRLLTANEEIELSEGIQELLKLE 123

Query: 1341 RLQVELTERCGAEPTFAQWAAAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQ 1520
            +LQ EL +RCG +PT AQWAAAAGVDQKTLR+R+NYGILCKDKMIKSNIRLVISIAKNYQ
Sbjct: 124  KLQEELVQRCGGQPTIAQWAAAAGVDQKTLRKRINYGILCKDKMIKSNIRLVISIAKNYQ 183

Query: 1521 GAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFH 1700
            GAGMNLQDLVQ+GCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFH
Sbjct: 184  GAGMNLQDLVQQGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFH 243

Query: 1701 MVEATYRVKEAKKQLFTENGRHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQ 1880
            MVEATYRV+EAKKQL++ NGRHP+DEEVAEATGLSMKRL+AV+LTPKAPRSL+QKIGINQ
Sbjct: 244  MVEATYRVREAKKQLYSVNGRHPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQ 303

Query: 1881 NLKPSEVIADPEAETAEDLLIKQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQE 2060
            NLKPSEVIADPEAETAED+L+K+FM+QDLEKVLDSLN REKQV+RWRFGLEDGRMKTLQE
Sbjct: 304  NLKPSEVIADPEAETAEDMLMKKFMKQDLEKVLDSLNAREKQVVRWRFGLEDGRMKTLQE 363

Query: 2061 IGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLVA 2174
            IGELMGVSRERIRQIESCAFRKLKNK+RTKHLQQY+V+
Sbjct: 364  IGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVVS 401


>ref|XP_004500709.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cicer arietinum]
          Length = 564

 Score =  605 bits (1561), Expect = e-170
 Identities = 337/622 (54%), Positives = 408/622 (65%), Gaps = 8/622 (1%)
 Frame = +3

Query: 333  MSCLLPQFKCLPDTFALTFKSHHHSATQL--SKGREPEYIRTQCILXXXXXXXXXXXXXL 506
            MSCLLPQF C PDTF     +H H    L  +K R   Y R QCIL              
Sbjct: 1    MSCLLPQFNCHPDTFRTPLPTHRHHLILLLQTKTRHNLYFRPQCIL-------------- 46

Query: 507  EIEKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRP-WTY 683
                                S  PP+++            L+  D  ++  AA+ P W Y
Sbjct: 47   --------------------SAAPPSTSA-----------LIDFDVAAAAAAANSPNWPY 75

Query: 684  TGATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLS 863
                    + +  A  + E+L+T+                           +++    L 
Sbjct: 76   VA------QAHFKATSSAESLLTNEEAVIAAAASEALTLAKAAAKVAKDAALLVKKKPLQ 129

Query: 864  KSDSKETDVPSDANTFMFESIMPYQLAERVSAIGESKD-----DEIGLGKSQSSECPLTE 1028
            ++  K + +PS  + F+ + +   +  E V+  G   +     +++ +  +Q       E
Sbjct: 130  EAGFK-SQLPSTPDNFLLKWVQHMEAQEAVAGGGSVSNGAEILEDVDISPNQE------E 182

Query: 1029 SDDVEPTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRR 1208
             D+ EPT       + QLS +I  RS                   N+VS KSGST RKRR
Sbjct: 183  LDEEEPTCEELENSEEQLSDSIDARSGRQTERKARRVRASGKAATNIVSFKSGSTSRKRR 242

Query: 1209 SSIQDVDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTF 1388
               Q+VDYSDPLRYLR TT ++RLLT  EE + S GIQDL+KLE+LQ +L E+CG EPTF
Sbjct: 243  VRTQEVDYSDPLRYLRTTTRTTRLLTPAEEIKYSEGIQDLIKLEKLQDDLVEKCGGEPTF 302

Query: 1389 AQWAAAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRG 1568
             QWA  AGVDQKTLR+RLNYG+ CK+KMIKSNIRLVIS+AKNYQG+GM+LQDLVQEGCRG
Sbjct: 303  GQWATLAGVDQKTLRKRLNYGVFCKEKMIKSNIRLVISVAKNYQGSGMSLQDLVQEGCRG 362

Query: 1569 LVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLF 1748
            LVRGAEK+DASKGFKFSTYAHWWIKQAVRK+LS QSRTIRLPFHMV ATY+VKEA+KQL+
Sbjct: 363  LVRGAEKYDASKGFKFSTYAHWWIKQAVRKALSVQSRTIRLPFHMVGATYKVKEARKQLY 422

Query: 1749 TENGRHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETA 1928
            +ENGR PDDEEVAEATGLSMKRLSAV+LTPKAPRSL+QKIGINQ+LKPSEV+ADPEAETA
Sbjct: 423  SENGRQPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQSLKPSEVLADPEAETA 482

Query: 1929 EDLLIKQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIE 2108
            E+ LIKQFM++DLEKVLDSLNPRE+QVIRWRFG++DGRMKTLQEIGE+MGVSRERIRQIE
Sbjct: 483  EEQLIKQFMKKDLEKVLDSLNPRERQVIRWRFGMDDGRMKTLQEIGEMMGVSRERIRQIE 542

Query: 2109 SCAFRKLKNKRRTKHLQQYLVA 2174
            SCAFRKLKNK+R KHLQQYLV+
Sbjct: 543  SCAFRKLKNKKRAKHLQQYLVS 564