BLASTX nr result
ID: Catharanthus23_contig00002858
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00002858
(400 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC33368.1| 50S ribosomal protein L27 [Morus notabilis] 71 1e-10
ref|XP_006447052.1| hypothetical protein CICLE_v10016825mg [Citr... 71 2e-10
ref|XP_002298632.2| ribosomal protein L27 precursor [Populus tri... 71 2e-10
ref|XP_004971106.1| PREDICTED: 50S ribosomal protein L27, chloro... 71 2e-10
gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides] 71 2e-10
ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloro... 70 2e-10
emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera] 70 2e-10
gb|EOY02823.1| Ribosomal protein large subunit 27 [Theobroma cacao] 70 3e-10
ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus com... 70 3e-10
ref|NP_001045244.1| Os01g0924000 [Oryza sativa Japonica Group] g... 69 6e-10
gb|EEC72062.1| hypothetical protein OsI_04988 [Oryza sativa Indi... 69 6e-10
ref|XP_006645255.1| PREDICTED: 50S ribosomal protein L27, chloro... 68 1e-09
gb|AFW84115.1| 50S ribosomal protein L27 [Zea mays] 68 1e-09
gb|AFW84114.1| hypothetical protein ZEAMMB73_595845 [Zea mays] 68 1e-09
gb|ACN37040.1| unknown [Zea mays] 68 1e-09
ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloro... 67 2e-09
ref|XP_006284558.1| hypothetical protein CARUB_v10005779mg [Caps... 67 2e-09
gb|EMJ18964.1| hypothetical protein PRUPE_ppa011695mg [Prunus pe... 67 3e-09
ref|NP_198911.1| 50S ribosomal protein L27 [Arabidopsis thaliana... 67 3e-09
ref|XP_003538227.1| PREDICTED: 50S ribosomal protein L27, chloro... 67 3e-09
>gb|EXC33368.1| 50S ribosomal protein L27 [Morus notabilis]
Length = 196
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/52 (69%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Frame = -3
Query: 392 QPENPNSYRARKRESFRVQRERRKAGREENLVQPQLVLASANED-SDVQPEC 240
QPENPNSYRARK+E FR+QRERRKA +E + +PQLVLASAN+D +D P C
Sbjct: 145 QPENPNSYRARKKEYFRMQRERRKARQEGIVPEPQLVLASANDDATDDNPVC 196
>ref|XP_006447052.1| hypothetical protein CICLE_v10016825mg [Citrus clementina]
gi|568831655|ref|XP_006470076.1| PREDICTED: 50S
ribosomal protein L27, chloroplastic-like [Citrus
sinensis] gi|557549663|gb|ESR60292.1| hypothetical
protein CICLE_v10016825mg [Citrus clementina]
Length = 192
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/52 (69%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Frame = -3
Query: 392 QPENPNSYRARKRESFRVQRERRKAGREENLVQPQLVLASANED-SDVQPEC 240
QPENPNSYRARKRE FR+QRE++KA +E L QPQLVLASA +D +D P C
Sbjct: 141 QPENPNSYRARKREYFRLQREKKKARKEAYLAQPQLVLASALDDAADGLPNC 192
>ref|XP_002298632.2| ribosomal protein L27 precursor [Populus trichocarpa]
gi|550348790|gb|EEE83437.2| ribosomal protein L27
precursor [Populus trichocarpa]
Length = 194
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = -3
Query: 392 QPENPNSYRARKRESFRVQRERRKAGREENLVQPQLVLASANEDSDVQPEC 240
QPENPNSYRARKRE+FR+QRER+KA +E + QPQLVLAS + +D P C
Sbjct: 144 QPENPNSYRARKRENFRLQRERKKARKEGIVAQPQLVLASNVDAADSNPVC 194
>ref|XP_004971106.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Setaria
italica]
Length = 191
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = -3
Query: 392 QPENPNSYRARKRESFRVQRERRKAGREENLVQPQLVLASANEDSDVQPEC 240
QPENPNSYRARKRE FR+QRER+KA R E V+PQLVLA +E+S+V +C
Sbjct: 142 QPENPNSYRARKREYFRMQRERKKA-RAEGYVEPQLVLAVVDENSEVSADC 191
>gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 197
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = -3
Query: 392 QPENPNSYRARKRESFRVQRERRKAGREENLVQPQLVLASANEDSDVQPEC 240
QPENPNSYRARKRE+FR+QRER+KA +E + QPQLVLAS + +D P C
Sbjct: 147 QPENPNSYRARKRENFRLQRERKKARKEGIVAQPQLVLASNVDAADSNPVC 197
>ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloroplastic [Vitis
vinifera] gi|296082339|emb|CBI21344.3| unnamed protein
product [Vitis vinifera]
Length = 186
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = -3
Query: 392 QPENPNSYRARKRESFRVQRERRKAGREENLVQPQLVLASANEDSDVQPEC 240
QPENPNS RA+KRE FR+QRER+KA +E + QPQLVLASANE +D P C
Sbjct: 136 QPENPNSCRAKKREYFRMQRERKKARKEGIVPQPQLVLASANEATDGNPIC 186
>emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera]
Length = 186
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = -3
Query: 392 QPENPNSYRARKRESFRVQRERRKAGREENLVQPQLVLASANEDSDVQPEC 240
QPENPNS RA+KRE FR+QRER+KA +E + QPQLVLASANE +D P C
Sbjct: 136 QPENPNSCRAKKREYFRMQRERKKARKEGIVPQPQLVLASANEATDGNPIC 186
>gb|EOY02823.1| Ribosomal protein large subunit 27 [Theobroma cacao]
Length = 191
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/53 (62%), Positives = 42/53 (79%)
Frame = -3
Query: 398 IPQPENPNSYRARKRESFRVQRERRKAGREENLVQPQLVLASANEDSDVQPEC 240
+ QPENPNSYRARKRE FR++RERRKA +E + +P+LVLASA + +D P C
Sbjct: 139 VVQPENPNSYRARKREYFRMRRERRKARKEGSPAEPELVLASAADATDSNPVC 191
>ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus communis]
gi|223549405|gb|EEF50893.1| ribosomal protein L27,
putative [Ricinus communis]
Length = 195
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = -3
Query: 392 QPENPNSYRARKRESFRVQRERRKAGREENLVQPQLVLASANEDSDVQPEC 240
QPENPNSYRARKRE FR+QRER+KA +E + +PQLVLAS + +D P+C
Sbjct: 145 QPENPNSYRARKREYFRLQRERKKARKEGLIAEPQLVLASNVDATDDNPDC 195
>ref|NP_001045244.1| Os01g0924000 [Oryza sativa Japonica Group]
gi|20139372|sp|O65037.1|RK27_ORYSJ RecName: Full=50S
ribosomal protein L27, chloroplastic; AltName:
Full=CL27; Flags: Precursor gi|2961176|gb|AAC05674.1|
ribosomal protein L27 precursor [Oryza sativa Japonica
Group] gi|20161735|dbj|BAB90651.1| ribosomal protein L27
precursor [Oryza sativa Japonica Group]
gi|20161923|dbj|BAB90834.1| ribosomal protein L27
precursor [Oryza sativa Japonica Group]
gi|113534775|dbj|BAF07158.1| Os01g0924000 [Oryza sativa
Japonica Group] gi|215692638|dbj|BAG88058.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222619785|gb|EEE55917.1| hypothetical protein
OsJ_04596 [Oryza sativa Japonica Group]
Length = 195
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/51 (66%), Positives = 42/51 (82%)
Frame = -3
Query: 392 QPENPNSYRARKRESFRVQRERRKAGREENLVQPQLVLASANEDSDVQPEC 240
QPENPNSYRARKRE FR+QRER+KA R E +V+ QLVLA+A+E +V +C
Sbjct: 146 QPENPNSYRARKREYFRMQRERKKA-RAEGIVEVQLVLAAADESPEVNADC 195
>gb|EEC72062.1| hypothetical protein OsI_04988 [Oryza sativa Indica Group]
Length = 195
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/51 (66%), Positives = 42/51 (82%)
Frame = -3
Query: 392 QPENPNSYRARKRESFRVQRERRKAGREENLVQPQLVLASANEDSDVQPEC 240
QPENPNSYRARKRE FR+QRER+KA R E +V+ QLVLA+A+E +V +C
Sbjct: 146 QPENPNSYRARKREYFRMQRERKKA-RAEGIVEVQLVLAAADESPEVNADC 195
>ref|XP_006645255.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Oryza
brachyantha]
Length = 180
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = -3
Query: 392 QPENPNSYRARKRESFRVQRERRKAGREENLVQPQLVLASANEDSDVQPEC 240
QPENPNSYRARKRE FR+QRERRKA R E V+ QLVLA+A+E +V +C
Sbjct: 131 QPENPNSYRARKREYFRMQRERRKA-RAEGNVEVQLVLAAADESPEVNADC 180
>gb|AFW84115.1| 50S ribosomal protein L27 [Zea mays]
Length = 190
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/51 (62%), Positives = 42/51 (82%)
Frame = -3
Query: 392 QPENPNSYRARKRESFRVQRERRKAGREENLVQPQLVLASANEDSDVQPEC 240
+PENPNSYRARKRE FR++RER+KA R E +PQLVLA+ +E+S+V +C
Sbjct: 141 EPENPNSYRARKREYFRMRRERKKA-RAEGAAEPQLVLAAVDENSEVSADC 190
>gb|AFW84114.1| hypothetical protein ZEAMMB73_595845 [Zea mays]
Length = 84
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/51 (62%), Positives = 42/51 (82%)
Frame = -3
Query: 392 QPENPNSYRARKRESFRVQRERRKAGREENLVQPQLVLASANEDSDVQPEC 240
+PENPNSYRARKRE FR++RER+KA R E +PQLVLA+ +E+S+V +C
Sbjct: 35 EPENPNSYRARKREYFRMRRERKKA-RAEGAAEPQLVLAAVDENSEVSADC 84
>gb|ACN37040.1| unknown [Zea mays]
Length = 191
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/51 (62%), Positives = 42/51 (82%)
Frame = -3
Query: 392 QPENPNSYRARKRESFRVQRERRKAGREENLVQPQLVLASANEDSDVQPEC 240
+PENPNSYRARKRE FR++RER+KA R E +PQLVLA+ +E+S+V +C
Sbjct: 141 EPENPNSYRARKREYFRMRRERKKA-RAEGAAEPQLVLAAVDENSEVSADC 190
>ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like isoform 1
[Cucumis sativus] gi|449441698|ref|XP_004138619.1|
PREDICTED: 50S ribosomal protein L27, chloroplastic-like
isoform 2 [Cucumis sativus]
gi|449518795|ref|XP_004166421.1| PREDICTED: 50S
ribosomal protein L27, chloroplastic-like isoform 1
[Cucumis sativus] gi|449518797|ref|XP_004166422.1|
PREDICTED: 50S ribosomal protein L27, chloroplastic-like
isoform 2 [Cucumis sativus]
Length = 183
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/51 (64%), Positives = 40/51 (78%)
Frame = -3
Query: 392 QPENPNSYRARKRESFRVQRERRKAGREENLVQPQLVLASANEDSDVQPEC 240
QPENPNSYRARKRE FR+QRER+KA +E + QPQL+LAS +D + P C
Sbjct: 134 QPENPNSYRARKREYFRLQRERKKARKEGIIAQPQLLLAS-TDDVETNPVC 183
>ref|XP_006284558.1| hypothetical protein CARUB_v10005779mg [Capsella rubella]
gi|482553263|gb|EOA17456.1| hypothetical protein
CARUB_v10005779mg [Capsella rubella]
Length = 198
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/54 (62%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
Frame = -3
Query: 389 PENPNSYRARKRESFRVQRERRKAGREE---NLVQPQLVLASAN-EDSDVQPEC 240
PENPNSYRARKRE+FR+QRE++KA RE + P+LVLASA+ ED++ PEC
Sbjct: 145 PENPNSYRARKRENFRLQREKKKARRENYTYTIPTPELVLASASIEDAEANPEC 198
>gb|EMJ18964.1| hypothetical protein PRUPE_ppa011695mg [Prunus persica]
Length = 200
Score = 66.6 bits (161), Expect = 3e-09
Identities = 36/53 (67%), Positives = 43/53 (81%), Gaps = 2/53 (3%)
Frame = -3
Query: 392 QPENPNSYRARKRESFRVQRERRKAGREENLV--QPQLVLASANEDSDVQPEC 240
QPENPNSYRARKRE+FR+QRER+KA +E + QPQLVLASA + +DV P C
Sbjct: 149 QPENPNSYRARKRENFRLQRERKKARKEGYTLRNQPQLVLASA-DAADVPPVC 200
>ref|NP_198911.1| 50S ribosomal protein L27 [Arabidopsis thaliana]
gi|20139726|sp|Q9FLN4.1|RK27_ARATH RecName: Full=50S
ribosomal protein L27, chloroplastic; AltName:
Full=CL27; Flags: Precursor gi|189096146|pdb|3BBO|X
Chain X, Homology Model For The Spinach Chloroplast 50s
Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
Chlororibosome gi|9759141|dbj|BAB09697.1| 50S ribosomal
protein L27 [Arabidopsis thaliana]
gi|15028249|gb|AAK76713.1| putative 50S ribosomal
protein L27 [Arabidopsis thaliana]
gi|21436345|gb|AAM51342.1| putative 50S ribosomal
protein L27 [Arabidopsis thaliana]
gi|332007235|gb|AED94618.1| 50S ribosomal protein L27
[Arabidopsis thaliana]
Length = 198
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/54 (62%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
Frame = -3
Query: 389 PENPNSYRARKRESFRVQRERRKAGREE---NLVQPQLVLASAN-EDSDVQPEC 240
PENPNSYRARKRE+FR+QRE++KA RE L P+LVLASA+ +D++ PEC
Sbjct: 145 PENPNSYRARKRENFRLQREKKKARRENYSYTLPTPELVLASASVDDAEANPEC 198
>ref|XP_003538227.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Glycine
max]
Length = 194
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = -3
Query: 392 QPENPNSYRARKRESFRVQRERRKAGREENLVQPQLVLASANEDSDVQPEC 240
QPENPNSYRARKRE FRV+RER+KA +E +++ QLVLASA++ + P C
Sbjct: 144 QPENPNSYRARKREYFRVRRERKKARQEGAILKSQLVLASADDAAITNPVC 194