BLASTX nr result
ID: Catharanthus23_contig00002791
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00002791
(1344 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB39314.1| hypothetical protein L484_025009 [Morus notabilis] 481 e-133
ref|XP_004144644.1| PREDICTED: exosome complex component RRP4-li... 476 e-131
gb|EMJ01600.1| hypothetical protein PRUPE_ppa008572mg [Prunus pe... 474 e-131
gb|ESW34379.1| hypothetical protein PHAVU_001G147600g [Phaseolus... 465 e-128
ref|XP_003554237.1| PREDICTED: exosome complex component RRP4 [G... 461 e-127
ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-li... 460 e-127
ref|XP_004290688.1| PREDICTED: exosome complex component rrp4-li... 460 e-127
ref|XP_004495115.1| PREDICTED: exosome complex component rrp4-li... 458 e-126
ref|XP_003609733.1| Exosome complex exonuclease RRP4 [Medicago t... 457 e-126
emb|CBI32318.3| unnamed protein product [Vitis vinifera] 454 e-125
gb|EOX92344.1| Ribosomal RNA processing 4 [Theobroma cacao] 450 e-124
ref|XP_004247486.1| PREDICTED: exosome complex component rrp4-li... 440 e-121
ref|XP_006358436.1| PREDICTED: exosome complex component rrp4-li... 439 e-120
ref|XP_002524799.1| rrp4, putative [Ricinus communis] gi|2235359... 438 e-120
ref|XP_002303939.1| exonuclease family protein [Populus trichoca... 437 e-120
ref|XP_006444154.1| hypothetical protein CICLE_v10021133mg [Citr... 428 e-117
ref|XP_004976250.1| PREDICTED: exosome complex component rrp4-li... 425 e-116
ref|XP_003564042.1| PREDICTED: exosome complex component rrp4-li... 420 e-115
ref|NP_171835.1| ribosomal RNA processing protein 4 [Arabidopsis... 417 e-114
ref|XP_002447269.1| hypothetical protein SORBIDRAFT_06g031660 [S... 416 e-114
>gb|EXB39314.1| hypothetical protein L484_025009 [Morus notabilis]
Length = 331
Score = 481 bits (1238), Expect = e-133
Identities = 244/331 (73%), Positives = 277/331 (83%), Gaps = 3/331 (0%)
Frame = +2
Query: 122 LRKTMRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDGVLKGHGT 301
+ + MRG Q+ L+ TQK K NS+ASVTVAD+IPVN EDGVLKGHGT
Sbjct: 1 MERGMRGTQLSLNQTQKVRLQRALEQLESLSSKVNSNASVTVADSIPVNYEDGVLKGHGT 60
Query: 302 SEIEGSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQD 481
SE+ G VVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRV+ VAPKRWR+EIN+SQD
Sbjct: 61 SELNGEVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVVVVAPKRWRIEINYSQD 120
Query: 482 AVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKL 661
AVLMLSSMNLPDGIQRRRTA+DELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKL
Sbjct: 121 AVLMLSSMNLPDGIQRRRTALDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKL 180
Query: 662 ERGQLLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAKDDMVVDQMDKSEQ 841
+RGQ+L I PYLVKRRKQHFHHL+Q+GIDLILGCNGFIW+GEHVEA DDM+ +Q++K+EQ
Sbjct: 181 KRGQMLTIPPYLVKRRKQHFHHLEQFGIDLILGCNGFIWVGEHVEATDDMLEEQVNKTEQ 240
Query: 842 Q---SDESGIPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIA 1012
Q SD + L EQE+ PLETR+ +CR ANAVRVLSTLGF+V++EVI E V +S +
Sbjct: 241 QITKSDRNSASLE-EQEQSSIPLETRQSLCRTANAVRVLSTLGFIVTIEVILETVNLSSS 299
Query: 1013 LNHDIHEMLGPEFYVLVAEKEVQRRLSTKKR 1105
LN D+HEMLG EF VLVAEKE +RR KK+
Sbjct: 300 LNLDVHEMLGSEFCVLVAEKEAERRTLNKKK 330
>ref|XP_004144644.1| PREDICTED: exosome complex component RRP4-like [Cucumis sativus]
Length = 327
Score = 476 bits (1224), Expect = e-131
Identities = 238/326 (73%), Positives = 273/326 (83%), Gaps = 2/326 (0%)
Frame = +2
Query: 134 MRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDGVLKGHGTSEIE 313
M+G+Q+ L++TQK K NSDASV VADTIP+N EDGVLKGHGT ++
Sbjct: 1 MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 60
Query: 314 GSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQDAVLM 493
G VVA++CGVVERVNKL+YVRALRARYKPEVGDI+VGRV EVAPKRWRL+IN+ QDAVLM
Sbjct: 61 GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYCQDAVLM 120
Query: 494 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 673
LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRG QHDGLHLQARSQKYGKLERGQ
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ 180
Query: 674 LLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAK--DDMVVDQMDKSEQQS 847
LL +SPYL+KRRKQHFHHL+QYGIDLILGCNGFIWIGEHV+ K D M+ DQ+DK EQ+
Sbjct: 181 LLTVSPYLIKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKG 240
Query: 848 DESGIPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIALNHDI 1027
+ + + +TPLETR+ ICR ANA+RVLSTLGF+++VEVI EIV +SI+LN D+
Sbjct: 241 SKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV 300
Query: 1028 HEMLGPEFYVLVAEKEVQRRLSTKKR 1105
HEMLG EF VL AEKEV+RR S+KKR
Sbjct: 301 HEMLGSEFCVLTAEKEVERRSSSKKR 326
>gb|EMJ01600.1| hypothetical protein PRUPE_ppa008572mg [Prunus persica]
Length = 326
Score = 474 bits (1219), Expect = e-131
Identities = 242/327 (74%), Positives = 273/327 (83%), Gaps = 3/327 (0%)
Frame = +2
Query: 134 MRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDGVLKGHGTSEIE 313
MR +Q+ L+ TQK KANS+ASVTVAD+IPVN EDG+LKGHGTSE
Sbjct: 1 MRELQLSLNQTQKVRLQRALEKLESLSSKANSNASVTVADSIPVNYEDGLLKGHGTSEFN 60
Query: 314 GSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQDAVLM 493
G VVATVCG+VERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWR+EIN+S DAVLM
Sbjct: 61 GEVVATVCGIVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRVEINYSHDAVLM 120
Query: 494 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 673
LSSMNLPDGIQRRRTA+DELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKL RGQ
Sbjct: 121 LSSMNLPDGIQRRRTALDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLGRGQ 180
Query: 674 LLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAKDDMVVDQMDKSEQ---Q 844
LL + PYLVKRRKQHFHHL+ YGIDLI+GCNGFIW+GEHV+ DDMVVDQ++KSEQ +
Sbjct: 181 LLTVPPYLVKRRKQHFHHLENYGIDLIIGCNGFIWVGEHVQVTDDMVVDQVNKSEQDDAK 240
Query: 845 SDESGIPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIALNHD 1024
DE+ I +Q + +T ETR+ ICR ANA+RVLSTLGF ++VEVITE V++S ++N
Sbjct: 241 PDENSIS-PEDQGKNYTRQETRENICRAANAIRVLSTLGFNITVEVITETVDLSTSINVA 299
Query: 1025 IHEMLGPEFYVLVAEKEVQRRLSTKKR 1105
IHEMLG EFYVLVAEKE RR TKK+
Sbjct: 300 IHEMLGSEFYVLVAEKESVRRSMTKKK 326
>gb|ESW34379.1| hypothetical protein PHAVU_001G147600g [Phaseolus vulgaris]
Length = 325
Score = 465 bits (1197), Expect = e-128
Identities = 226/324 (69%), Positives = 270/324 (83%)
Frame = +2
Query: 134 MRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDGVLKGHGTSEIE 313
MR +Q+PL TQK K NSDASV +AD+IPVN EDGVLKGHGT+++
Sbjct: 1 MRRIQLPLSQTQKVRLQKTLEQLESLSSKVNSDASVIIADSIPVNHEDGVLKGHGTADLN 60
Query: 314 GSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQDAVLM 493
G VVATVCGVVERVNKLVYVR+LR+RYKPEVGDI++GRV+EVA KRWRL+INF+QDAVLM
Sbjct: 61 GEVVATVCGVVERVNKLVYVRSLRSRYKPEVGDIVIGRVVEVAQKRWRLDINFNQDAVLM 120
Query: 494 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 673
LSSMN+PDG+QRRRTA+DELNMR IFEENDV+CAEVRGFQHDGLHLQARS+KYGKL RGQ
Sbjct: 121 LSSMNMPDGVQRRRTALDELNMRCIFEENDVVCAEVRGFQHDGLHLQARSRKYGKLNRGQ 180
Query: 674 LLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAKDDMVVDQMDKSEQQSDE 853
LL++ PYLVKR+KQHFHHL+++GIDLI+GCNGFIW+GEH+EAKDDMV DQ+ +S+ Q
Sbjct: 181 LLSVPPYLVKRQKQHFHHLEEFGIDLIIGCNGFIWVGEHIEAKDDMVEDQVSQSDPQVLL 240
Query: 854 SGIPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIALNHDIHE 1033
EQER +T LETRKYICR ANAVRVLS L F +++E+I I+++S+++N DIHE
Sbjct: 241 HNSVSLEEQERNYTILETRKYICRAANAVRVLSILSFNMTLEIIKGIIDLSLSMNLDIHE 300
Query: 1034 MLGPEFYVLVAEKEVQRRLSTKKR 1105
MLG EF VLVAEKE +RR S KK+
Sbjct: 301 MLGSEFCVLVAEKEAERRSSNKKK 324
>ref|XP_003554237.1| PREDICTED: exosome complex component RRP4 [Glycine max]
Length = 327
Score = 461 bits (1187), Expect = e-127
Identities = 227/327 (69%), Positives = 274/327 (83%), Gaps = 3/327 (0%)
Frame = +2
Query: 134 MRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDGVLKGHGTSEIE 313
MR +Q+PL TQK K NSDASV +AD+I VN EDGVLKGHGT+++
Sbjct: 1 MREIQLPLSQTQKVRLQKALEQLESLSTKVNSDASVIIADSIHVNHEDGVLKGHGTADLN 60
Query: 314 GSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQDAVLM 493
G VVAT+CGVVERVNKLVYVRALR+RYKPEVGDI++GRV+EVA KRWRLEIN++QDAVL+
Sbjct: 61 GEVVATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVVEVAQKRWRLEINYNQDAVLL 120
Query: 494 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 673
LSSMN+PDG+QRRRTAVDELNMR IFEENDV+CAEVRGFQHDGLHLQARS+KYGKL RGQ
Sbjct: 121 LSSMNMPDGVQRRRTAVDELNMRCIFEENDVVCAEVRGFQHDGLHLQARSRKYGKLNRGQ 180
Query: 674 LLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAKDDMVVDQMDKSEQQ--- 844
LL + PYLVKR+KQHFHHL+++GIDLILGCNGFIW+GEHVEAKDDM+ DQ+ +S+ Q
Sbjct: 181 LLTVPPYLVKRQKQHFHHLEEFGIDLILGCNGFIWVGEHVEAKDDMIEDQVSQSDSQVLF 240
Query: 845 SDESGIPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIALNHD 1024
+++ + L EQE+ +T LETRKYI R ANAVRVLSTLGF +++E+I I+++S+++N D
Sbjct: 241 PNKNCVSLE-EQEKNYTILETRKYISRAANAVRVLSTLGFNITLEIIKGIIDLSLSMNLD 299
Query: 1025 IHEMLGPEFYVLVAEKEVQRRLSTKKR 1105
IH+MLG EF VLVAEKE +RR S KKR
Sbjct: 300 IHDMLGSEFCVLVAEKEAERRSSMKKR 326
>ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-like [Vitis vinifera]
Length = 330
Score = 460 bits (1184), Expect = e-127
Identities = 236/329 (71%), Positives = 270/329 (82%), Gaps = 5/329 (1%)
Frame = +2
Query: 134 MRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDGVLKGHGTSEIE 313
MRG Q+ L+ TQK K+NS+ASV VADTIPVN EDGVLKGHGT +++
Sbjct: 1 MRGFQLSLNQTQKLRLQRALEQLESLSSKSNSNASVAVADTIPVNYEDGVLKGHGTLDLD 60
Query: 314 GSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQDAVLM 493
G VVAT+CGVVERVNKLVY+R LRARYKPE GDIIVGRV E+APKRWRL+INFSQDAVLM
Sbjct: 61 GEVVATLCGVVERVNKLVYIRTLRARYKPETGDIIVGRVTEIAPKRWRLDINFSQDAVLM 120
Query: 494 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERG 670
LSSMNLPDGIQRRRTAVDELNMRSIFEEND++CAEVRGFQHDG LHLQARSQKYGKLERG
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDIVCAEVRGFQHDGSLHLQARSQKYGKLERG 180
Query: 671 QLLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAKDDMVVDQMDKSEQ--- 841
Q+L ISPYLVKRRKQH H+L+++G+DLILGCNGFIW+GEHVEAK ++ DQ DK+EQ
Sbjct: 181 QVLTISPYLVKRRKQHLHYLEEFGVDLILGCNGFIWVGEHVEAKGILIEDQTDKAEQLNT 240
Query: 842 QSDESGIPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIALNH 1021
+S S EQER +T LETR+ ICR+ANAVRVL+ LGF V+VEVI E V +S +LN
Sbjct: 241 KSSSSTFMSLEEQERTYTSLETRQNICRIANAVRVLANLGFSVTVEVIKETVNLSSSLNL 300
Query: 1022 DIHEMLGPEFYVLVAEKEVQRR-LSTKKR 1105
DIHEMLG EFYVLVAE E R+ + TKK+
Sbjct: 301 DIHEMLGSEFYVLVAEGEATRKSMFTKKK 329
>ref|XP_004290688.1| PREDICTED: exosome complex component rrp4-like [Fragaria vesca subsp.
vesca]
Length = 328
Score = 460 bits (1183), Expect = e-127
Identities = 238/328 (72%), Positives = 270/328 (82%), Gaps = 4/328 (1%)
Frame = +2
Query: 134 MRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDGVLKGHGTSEIE 313
MRG+Q+ L+ TQK K NS+ASV VAD+IPVN EDG+LKGHGTSE+
Sbjct: 1 MRGLQVSLNQTQKVRLQRALEKLESLSSKPNSNASVIVADSIPVNHEDGLLKGHGTSEVN 60
Query: 314 GSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQDAVLM 493
G VVATVCGVVERVNKLVYVR+LRARYKPEVGDIIVGRVIEVAPKRWR+EIN+S DAVLM
Sbjct: 61 GEVVATVCGVVERVNKLVYVRSLRARYKPEVGDIIVGRVIEVAPKRWRVEINYSHDAVLM 120
Query: 494 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 673
LSSMNLPDGIQRRRTA+DELNMR+IFEENDVICAEVRGFQ+DGLHLQARSQKYGKL RGQ
Sbjct: 121 LSSMNLPDGIQRRRTALDELNMRTIFEENDVICAEVRGFQYDGLHLQARSQKYGKLGRGQ 180
Query: 674 LLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAKDDMVVDQMDKSEQQSDE 853
+L + PYLVKRRKQHFH+LD+YGIDLILGCNGFIW+GEHVE DDMVVDQ++ SEQQS +
Sbjct: 181 MLTVPPYLVKRRKQHFHNLDKYGIDLILGCNGFIWVGEHVEITDDMVVDQVNNSEQQSAK 240
Query: 854 SG--IPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIALNHD- 1024
S I EQER +TP ETR+ I R ANA+RVLS LGF ++ EVI + VE+SI+L
Sbjct: 241 SDKKILSPEEQERSYTPQETRENIVRTANAIRVLSALGFNITAEVIMDTVELSISLKQQV 300
Query: 1025 -IHEMLGPEFYVLVAEKEVQRRLSTKKR 1105
I++MLG EF VLVAEKE RR TKK+
Sbjct: 301 PIYKMLGAEFCVLVAEKEAARRSVTKKK 328
>ref|XP_004495115.1| PREDICTED: exosome complex component rrp4-like [Cicer arietinum]
Length = 327
Score = 458 bits (1178), Expect = e-126
Identities = 223/327 (68%), Positives = 272/327 (83%), Gaps = 3/327 (0%)
Frame = +2
Query: 134 MRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDGVLKGHGTSEIE 313
MRG+Q+ L TQK K NSDASVT+AD+IPVN EDGVLKGHGT+++
Sbjct: 1 MRGIQLQLSQTQKVRLQKALEQLESLSSKVNSDASVTIADSIPVNHEDGVLKGHGTTDLN 60
Query: 314 GSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQDAVLM 493
G VVAT+CGVVERVNKLVYVR+LR+RYKPEVGDI++GRV+EVA KRWRL+IN+SQ+A LM
Sbjct: 61 GEVVATLCGVVERVNKLVYVRSLRSRYKPEVGDIVIGRVVEVAQKRWRLDINYSQNAYLM 120
Query: 494 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 673
LS+MN+PDG+QRRRTA+DELNMR IFEE DVICAEVRGFQHDGLHLQARSQKYGKL GQ
Sbjct: 121 LSAMNMPDGVQRRRTALDELNMRCIFEEMDVICAEVRGFQHDGLHLQARSQKYGKLSTGQ 180
Query: 674 LLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAKDDMVVDQMDKSEQQ--- 844
LL + PYLVKR+KQHFHHL+QYGIDLI+GCNGFIW+GEHVEA+DDMV DQ+++++ Q
Sbjct: 181 LLTVPPYLVKRQKQHFHHLEQYGIDLIIGCNGFIWVGEHVEARDDMVEDQVNQTDPQVLI 240
Query: 845 SDESGIPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIALNHD 1024
++ + EQE+ +T LETRKYICR ANAVRVLS+LGF++++E+I + E+S++ N D
Sbjct: 241 PNKDSVSFE-EQEKNYTALETRKYICRAANAVRVLSSLGFIITLEIIKGVFELSLSSNLD 299
Query: 1025 IHEMLGPEFYVLVAEKEVQRRLSTKKR 1105
IH+MLG EF VLVAEKE +RR S KK+
Sbjct: 300 IHDMLGSEFCVLVAEKEAERRSSNKKK 326
>ref|XP_003609733.1| Exosome complex exonuclease RRP4 [Medicago truncatula]
gi|217074186|gb|ACJ85453.1| unknown [Medicago truncatula]
gi|355510788|gb|AES91930.1| Exosome complex exonuclease
RRP4 [Medicago truncatula] gi|388516977|gb|AFK46550.1|
unknown [Medicago truncatula]
Length = 327
Score = 457 bits (1176), Expect = e-126
Identities = 223/327 (68%), Positives = 273/327 (83%), Gaps = 3/327 (0%)
Frame = +2
Query: 134 MRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDGVLKGHGTSEIE 313
MRG+ + L TQK K NSD+SVT+AD+IPVN EDGVLKGHGT++++
Sbjct: 1 MRGIHLQLSQTQKLRLQKALEHLESLSSKVNSDSSVTIADSIPVNHEDGVLKGHGTADLD 60
Query: 314 GSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQDAVLM 493
G VVAT+CGVVERVNKLVYVRALR+RYKPEVGDI++GRVIEVA KRWRL+IN+SQ+A LM
Sbjct: 61 GEVVATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVIEVAQKRWRLDINYSQNAYLM 120
Query: 494 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 673
LS+MN+PDG+QRRRTA+DELNMR IFEE DVICAEVRGFQHDGLHLQARSQKYGKL GQ
Sbjct: 121 LSAMNMPDGVQRRRTALDELNMRCIFEEADVICAEVRGFQHDGLHLQARSQKYGKLSTGQ 180
Query: 674 LLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAKDDMVVDQMDKSEQQ--- 844
LL ++PYLVKR+KQHFHHL+QYGIDLI+GCNGFIW+GEHVE +DDMV DQ+++S+ Q
Sbjct: 181 LLTVTPYLVKRQKQHFHHLEQYGIDLIIGCNGFIWVGEHVEVRDDMVEDQVNQSDPQVLT 240
Query: 845 SDESGIPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIALNHD 1024
+++ + L EQE+ +T LETRKYICR ANAVR LSTLGF+++ E+I ++++S++ N D
Sbjct: 241 PNKNSVSLE-EQEKKYTALETRKYICRAANAVRGLSTLGFIITSEIIKGVIDLSLSANLD 299
Query: 1025 IHEMLGPEFYVLVAEKEVQRRLSTKKR 1105
IH+MLG EF VLVAEKE +RR S KK+
Sbjct: 300 IHDMLGSEFCVLVAEKEAERRSSNKKK 326
>emb|CBI32318.3| unnamed protein product [Vitis vinifera]
Length = 320
Score = 454 bits (1169), Expect = e-125
Identities = 232/326 (71%), Positives = 268/326 (82%), Gaps = 2/326 (0%)
Frame = +2
Query: 134 MRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDGVLKGHGTSEIE 313
MRG Q+ L+ TQK K+NS+ASV VADTIPVN EDGVLKGHGT +++
Sbjct: 1 MRGFQLSLNQTQKLRLQRALEQLESLSSKSNSNASVAVADTIPVNYEDGVLKGHGTLDLD 60
Query: 314 GSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQDAVLM 493
G VVAT+CGVVERVNKLVY+R LRARYKPE GDIIVGRV E+APKRWRL+INFSQDAVLM
Sbjct: 61 GEVVATLCGVVERVNKLVYIRTLRARYKPETGDIIVGRVTEIAPKRWRLDINFSQDAVLM 120
Query: 494 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERG 670
LSSMNLPDGIQRRRTAVDELNMRSIFEEND++CAEVRGFQHDG LHLQARSQKYGKLERG
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDIVCAEVRGFQHDGSLHLQARSQKYGKLERG 180
Query: 671 QLLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAKDDMVVDQMDKSEQQSD 850
Q+L ISPYLVKRRKQH H+L+++G+DLILGCNGFIW+GEHVEAK ++ DQ DK+EQ +
Sbjct: 181 QVLTISPYLVKRRKQHLHYLEEFGVDLILGCNGFIWVGEHVEAKGILIEDQTDKAEQLNT 240
Query: 851 ESGIPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIALNHDIH 1030
+S +R +T LETR+ ICR+ANAVRVL+ LGF V+VEVI E V +S +LN DIH
Sbjct: 241 KS-------SKRTYTSLETRQNICRIANAVRVLANLGFSVTVEVIKETVNLSSSLNLDIH 293
Query: 1031 EMLGPEFYVLVAEKEVQRR-LSTKKR 1105
EMLG EFYVLVAE E R+ + TKK+
Sbjct: 294 EMLGSEFYVLVAEGEATRKSMFTKKK 319
>gb|EOX92344.1| Ribosomal RNA processing 4 [Theobroma cacao]
Length = 319
Score = 450 bits (1157), Expect = e-124
Identities = 229/326 (70%), Positives = 268/326 (82%), Gaps = 2/326 (0%)
Frame = +2
Query: 134 MRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDGVLKGHGTSEIE 313
MRG+Q+PL+ TQ+ KANSDASVTVADTIPVN +D LKGHGT+E+
Sbjct: 1 MRGLQLPLNQTQRIRLQRALEKLHSLSSKANSDASVTVADTIPVNYDDAFLKGHGTTELN 60
Query: 314 GSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQDAVLM 493
G +VATVCGVVERVNKLVYVRALRARYKPEVGDI+VGRV+EVA KRWRLEINFSQDAVLM
Sbjct: 61 GELVATVCGVVERVNKLVYVRALRARYKPEVGDIVVGRVVEVAQKRWRLEINFSQDAVLM 120
Query: 494 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERG 670
LSSMN+PDGIQRRRTA+DELNMRSIFEENDV+CAEVR F HDG + LQARSQKYGKLE+G
Sbjct: 121 LSSMNMPDGIQRRRTALDELNMRSIFEENDVVCAEVRNFHHDGSVQLQARSQKYGKLEKG 180
Query: 671 QLLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAKDDMVVDQMDKSEQQSD 850
QLL I PYLVK+ KQHFH+L+Q+GIDLILG NGFIW+GEHVEA+D M+VDQ + SEQ
Sbjct: 181 QLLIIDPYLVKKSKQHFHYLEQFGIDLILGRNGFIWVGEHVEARDGMIVDQANNSEQS-- 238
Query: 851 ESGIPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIALNHDIH 1030
T E+++ +TPLE R+ ICR+ANAVRVLSTLGF V ++I E E+S +LN DIH
Sbjct: 239 ------TVEKDQAYTPLEMRQNICRIANAVRVLSTLGFNVDADLIIETAELSSSLNIDIH 292
Query: 1031 EMLGPEFYVLVAEKEVQRR-LSTKKR 1105
+MLG EF+VLVAE+E +RR L TK++
Sbjct: 293 DMLGSEFHVLVAEREAERRSLMTKRK 318
>ref|XP_004247486.1| PREDICTED: exosome complex component rrp4-like [Solanum lycopersicum]
Length = 325
Score = 440 bits (1132), Expect = e-121
Identities = 225/325 (69%), Positives = 259/325 (79%), Gaps = 1/325 (0%)
Frame = +2
Query: 134 MRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDGVLKGHGTSEIE 313
MRG+Q+ NTQK K NS+A+V VAD IPV+ ED LKGHGT E+
Sbjct: 1 MRGIQLSFSNTQKLRLEKALAQLESFSSKLNSNATVIVADKIPVD-EDAALKGHGTLEMG 59
Query: 314 GSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQDAVLM 493
VVA+VCGVVERVNKLVYVR LRARYKPE+GDIIVGRVIEVAPKRWRLEINFSQDAVLM
Sbjct: 60 NDVVASVCGVVERVNKLVYVRPLRARYKPEIGDIIVGRVIEVAPKRWRLEINFSQDAVLM 119
Query: 494 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERG 670
LSSMNLPDGIQRRRTAVDELNMRSIF ENDVICAEVRGFQHDG LHLQARSQKYGKLERG
Sbjct: 120 LSSMNLPDGIQRRRTAVDELNMRSIFVENDVICAEVRGFQHDGSLHLQARSQKYGKLERG 179
Query: 671 QLLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAKDDMVVDQMDKSEQQSD 850
+LL I PYLVKRRKQHFHHLDQYG+DLI GCNG IW+GEH++ KD MV DQ++KS+ Q+
Sbjct: 180 KLLKIPPYLVKRRKQHFHHLDQYGVDLIFGCNGLIWVGEHIDVKDVMVEDQVNKSDPQNT 239
Query: 851 ESGIPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIALNHDIH 1030
S +E TPLE R+YICR+ANA+ V S LGFMV+++ I E V +S++LN +H
Sbjct: 240 HSSSLPGSSEEPTDTPLEIRQYICRIANAITVFSALGFMVNLDSIMETVTLSLSLNLGVH 299
Query: 1031 EMLGPEFYVLVAEKEVQRRLSTKKR 1105
EML EF+V VAE+E +RR ++K+R
Sbjct: 300 EMLEAEFHVRVAEQEAERRSTSKRR 324
>ref|XP_006358436.1| PREDICTED: exosome complex component rrp4-like [Solanum tuberosum]
Length = 325
Score = 439 bits (1129), Expect = e-120
Identities = 224/325 (68%), Positives = 259/325 (79%), Gaps = 1/325 (0%)
Frame = +2
Query: 134 MRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDGVLKGHGTSEIE 313
MRG+Q+ NTQK K NS+A+V VAD IPV+ ED LKGHGT E+
Sbjct: 1 MRGIQLSFSNTQKLRLEKALAQLESLSSKLNSNATVIVADKIPVD-EDAALKGHGTLEMG 59
Query: 314 GSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQDAVLM 493
VVA+VCGVVERVNKLVYVR LRARYKPE+GDIIVGRVIEVAPKRWRLEINFSQDAVLM
Sbjct: 60 NDVVASVCGVVERVNKLVYVRPLRARYKPEIGDIIVGRVIEVAPKRWRLEINFSQDAVLM 119
Query: 494 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERG 670
LSSMNLPDGIQRRRTAVDELNMRSIF ENDVICAEVRGFQHDG LHLQARSQKYGKLERG
Sbjct: 120 LSSMNLPDGIQRRRTAVDELNMRSIFVENDVICAEVRGFQHDGSLHLQARSQKYGKLERG 179
Query: 671 QLLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAKDDMVVDQMDKSEQQSD 850
+LL I PYLVKRRKQHFHHLDQYG+DLI GCNG IW+GEHV+ KD MV DQ++KS+ Q+
Sbjct: 180 KLLKIPPYLVKRRKQHFHHLDQYGVDLIFGCNGLIWVGEHVDVKDAMVEDQVNKSDPQNT 239
Query: 851 ESGIPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIALNHDIH 1030
S +E TPLE R+YICR+ANA+ V S LGFMV+++ + E V +S++LN +H
Sbjct: 240 HSSSLPGSSEEPTDTPLERRQYICRIANAITVFSALGFMVNLDSVMETVTLSLSLNLGVH 299
Query: 1031 EMLGPEFYVLVAEKEVQRRLSTKKR 1105
EML EF+V VAE+E ++R ++K+R
Sbjct: 300 EMLEAEFHVRVAEQEAEQRSTSKRR 324
>ref|XP_002524799.1| rrp4, putative [Ricinus communis] gi|223535983|gb|EEF37642.1| rrp4,
putative [Ricinus communis]
Length = 322
Score = 438 bits (1127), Expect = e-120
Identities = 226/326 (69%), Positives = 266/326 (81%), Gaps = 2/326 (0%)
Frame = +2
Query: 134 MRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDG-VLKGHGTSEI 310
MR +Q+PL+ TQK K +SDASVTVADTIP++LEDG +LKGHGT+E
Sbjct: 1 MREIQLPLNQTQKIRLQRALQQLESLHSKVHSDASVTVADTIPISLEDGNILKGHGTAER 60
Query: 311 EGSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQDAVL 490
+G VVAT CGVVERVN LVYVR+LR+RYKPEVGDIIVGRVIEVA KRW+LEINFSQDAVL
Sbjct: 61 DGEVVATTCGVVERVNMLVYVRSLRSRYKPEVGDIIVGRVIEVAQKRWKLEINFSQDAVL 120
Query: 491 MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLER 667
MLSSMNLPDGIQRRRTA+DELNMR++FEENDV+CAEVR FQ+DG L LQARSQKYGKLE+
Sbjct: 121 MLSSMNLPDGIQRRRTALDELNMRNVFEENDVVCAEVRNFQNDGSLQLQARSQKYGKLEK 180
Query: 668 GQLLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAKDDMVVDQMDKSEQQS 847
GQLL +SPYLVKR+KQHFHHL QY +DLILGCNGFIW+GEHV+A+D MV DQ++++E Q
Sbjct: 181 GQLLTVSPYLVKRQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARDSMVEDQVNETEDQD 240
Query: 848 DESGIPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIALNHDI 1027
+S T+E+ PLETR+ ICR+ANAVRVLSTLGF +++EVI E +S LN I
Sbjct: 241 TKSN--KTFEE----VPLETRRNICRIANAVRVLSTLGFSLTLEVILETFSLSSTLNLGI 294
Query: 1028 HEMLGPEFYVLVAEKEVQRRLSTKKR 1105
EM GPEF+VLVAEKE +RR S K+
Sbjct: 295 DEMPGPEFHVLVAEKEAERRSSLTKK 320
>ref|XP_002303939.1| exonuclease family protein [Populus trichocarpa]
gi|222841371|gb|EEE78918.1| exonuclease family protein
[Populus trichocarpa]
Length = 320
Score = 437 bits (1125), Expect = e-120
Identities = 222/325 (68%), Positives = 261/325 (80%), Gaps = 1/325 (0%)
Frame = +2
Query: 134 MRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDGVLKGHGTSEIE 313
MRG++I L+ TQK +AN +ASVTVADTIPV+ ED +LKGHGTSE +
Sbjct: 1 MRGIEISLNQTQKIRLQRALKQLESLYLRANFNASVTVADTIPVSNEDTILKGHGTSERD 60
Query: 314 GSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQDAVLM 493
G VVAT+CGVVERVNKLVYVR LRARYKPE+GDIIVGRV+EVA KRW+LEINFSQDAVLM
Sbjct: 61 GEVVATLCGVVERVNKLVYVRTLRARYKPEIGDIIVGRVVEVAQKRWKLEINFSQDAVLM 120
Query: 494 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHD-GLHLQARSQKYGKLERG 670
LSSMNLPDG+QRRRTA+DELNMRSIFEENDV+C EVR FQ+D G+ LQARSQKYGKLE+G
Sbjct: 121 LSSMNLPDGLQRRRTALDELNMRSIFEENDVVCGEVRNFQNDGGIQLQARSQKYGKLEKG 180
Query: 671 QLLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAKDDMVVDQMDKSEQQSD 850
QLL I PYLVKR+K HFHHL+QYG+DLILGCNGFIW+GEHVEA+D +V DQ++ +EQQ
Sbjct: 181 QLLTIPPYLVKRQKHHFHHLEQYGVDLILGCNGFIWVGEHVEARDCIVEDQLNNTEQQ-- 238
Query: 851 ESGIPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIALNHDIH 1030
T PLETR+ IC++ANA+RVLS LGF V++EVI E +++S LN I
Sbjct: 239 -----FTKSNTTKEMPLETRRSICQIANAIRVLSILGFNVTLEVILETIDLSSTLNLGID 293
Query: 1031 EMLGPEFYVLVAEKEVQRRLSTKKR 1105
EMLGPEF+VLVAE+E +RR S KR
Sbjct: 294 EMLGPEFHVLVAEREAERRTSMTKR 318
>ref|XP_006444154.1| hypothetical protein CICLE_v10021133mg [Citrus clementina]
gi|568852241|ref|XP_006479788.1| PREDICTED: exosome
complex component RRP4-like [Citrus sinensis]
gi|557546416|gb|ESR57394.1| hypothetical protein
CICLE_v10021133mg [Citrus clementina]
Length = 327
Score = 428 bits (1100), Expect = e-117
Identities = 221/329 (67%), Positives = 262/329 (79%), Gaps = 5/329 (1%)
Frame = +2
Query: 134 MRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDGVLKGHGTSEIE 313
MR +Q+ + TQK K+N ++ VTV DTIPV EDG+LKGHGTS+ +
Sbjct: 1 MRNLQLSFNQTQKVRLEKALERLESLSSKSNPNSCVTVGDTIPV-YEDGILKGHGTSDQK 59
Query: 314 GSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQDAVLM 493
G + ATVCGVVER+NKL+YVRALRARYKPE GDI++GRVIEV PKRW+LEINF+QDA+LM
Sbjct: 60 GELAATVCGVVERINKLIYVRALRARYKPETGDIVIGRVIEVVPKRWKLEINFTQDAILM 119
Query: 494 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERG 670
LSSMNLPDGIQRRRTAVDELNMRSIF END++CAEVR Q DG L LQAR+QKYGKLERG
Sbjct: 120 LSSMNLPDGIQRRRTAVDELNMRSIFTENDLVCAEVRSSQGDGSLQLQARNQKYGKLERG 179
Query: 671 QLLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAKDDMVVDQMDKSEQ--- 841
QLL + PYLVKRRKQHFHHL++YGIDLI+GCNG+IWIGEHVEA+D MVVDQ SEQ
Sbjct: 180 QLLTVDPYLVKRRKQHFHHLEEYGIDLIIGCNGYIWIGEHVEARDKMVVDQGSNSEQLIA 239
Query: 842 QSDESGIPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIALNH 1021
+ D++ + L EQ+ TP E R+ ICR+ANA+RVLS LGF ++VEVI E V +S +LN
Sbjct: 240 KCDKNSMDLD-EQDGTCTPREARQNICRIANAIRVLSRLGFNITVEVILETVNLSNSLNL 298
Query: 1022 DIHEMLGPEFYVLVAEKEVQRR-LSTKKR 1105
DIH+MLG EFYVLVAE E +RR LS +KR
Sbjct: 299 DIHDMLGSEFYVLVAESEAERRSLSKRKR 327
>ref|XP_004976250.1| PREDICTED: exosome complex component rrp4-like [Setaria italica]
Length = 319
Score = 425 bits (1093), Expect = e-116
Identities = 220/327 (67%), Positives = 255/327 (77%), Gaps = 1/327 (0%)
Frame = +2
Query: 134 MRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDGVLKGHGTSEIE 313
MR + + L+ TQ+ A S A+VTVADTIPVN ED +LKGHGTS+ +
Sbjct: 1 MRDLHLSLNQTQRVRLEAALHELQSLTPAAASAAAVTVADTIPVNQEDNILKGHGTSDQD 60
Query: 314 GSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQDAVLM 493
G VVAT+CGVVERVNKLVYVR LRARYKPEVGDIIVGRVIE+APKRWRLEINFSQDAVLM
Sbjct: 61 GEVVATLCGVVERVNKLVYVRTLRARYKPEVGDIIVGRVIEIAPKRWRLEINFSQDAVLM 120
Query: 494 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERG 670
LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG LHLQARS+KYGKLERG
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGSLHLQARSEKYGKLERG 180
Query: 671 QLLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAKDDMVVDQMDKSEQQSD 850
QLL + PYLVKR+KQHFHHL QY +DLILGCNGFIW+GEHV VVD+ K+ +
Sbjct: 181 QLLTVPPYLVKRKKQHFHHLAQYDVDLILGCNGFIWVGEHV------VVDEKVKATEDQQ 234
Query: 851 ESGIPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIALNHDIH 1030
+S ++ TPLETRK+ICR+ANAVRVLS LGF ++VE+I E E S + N +++
Sbjct: 235 KSS-----DEAENFTPLETRKHICRLANAVRVLSALGFTLTVELIIETAEASASSNVEVN 289
Query: 1031 EMLGPEFYVLVAEKEVQRRLSTKKR*N 1111
+MLG EFYV AE+E +RR ++ N
Sbjct: 290 DMLGAEFYVQTAEREAKRRADLLRKKN 316
>ref|XP_003564042.1| PREDICTED: exosome complex component rrp4-like [Brachypodium
distachyon]
Length = 319
Score = 420 bits (1080), Expect = e-115
Identities = 214/327 (65%), Positives = 255/327 (77%), Gaps = 1/327 (0%)
Frame = +2
Query: 134 MRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDGVLKGHGTSEIE 313
MR + +PL+ TQ+ A S ASVTVAD IPVN ED +LKGHGTS+ +
Sbjct: 1 MRDLHLPLNQTQRVRLEAALHELQSLAPAAASAASVTVADNIPVNQEDNILKGHGTSDHD 60
Query: 314 GSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQDAVLM 493
G VVAT+CGVVERVNKLVYVR LRARYKPEVGDIIVGRVIE+APKRWRLEINFSQDAVLM
Sbjct: 61 GEVVATLCGVVERVNKLVYVRTLRARYKPEVGDIIVGRVIEIAPKRWRLEINFSQDAVLM 120
Query: 494 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERG 670
LSSMNLPDGIQRRRTAVDELNMRSIFEENDV+CAEVRGFQHDG LHLQARSQKYGKL+RG
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVVCAEVRGFQHDGSLHLQARSQKYGKLQRG 180
Query: 671 QLLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAKDDMVVDQMDKSEQQSD 850
QLL + YLVKRRKQHFHHL+QY +DLILGCNGF+W+G+HV +++ + + ++ SD
Sbjct: 181 QLLTVPAYLVKRRKQHFHHLEQYDVDLILGCNGFVWVGQHVLVREN--TESKEDKQKLSD 238
Query: 851 ESGIPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIALNHDIH 1030
E TP+ETRK+ICR+ANAVRVLS LGF +++E+I + E S++ N +I+
Sbjct: 239 EVDT---------FTPIETRKHICRLANAVRVLSALGFTLTIELIIQTAEASLSSNVEIN 289
Query: 1031 EMLGPEFYVLVAEKEVQRRLSTKKR*N 1111
+MLG EFYV AE+E +RR ++ N
Sbjct: 290 DMLGAEFYVQTAEREARRRADLLRKKN 316
>ref|NP_171835.1| ribosomal RNA processing protein 4 [Arabidopsis thaliana]
gi|3850568|gb|AAC72108.1| Similar to hypothetical protein
SPAC2F7.14c gi|1052797 from Schizosaccharomyces pombe
cosmid gb|Z50142 [Arabidopsis thaliana]
gi|34365689|gb|AAQ65156.1| At1g03360 [Arabidopsis
thaliana] gi|51970606|dbj|BAD43995.1| hypothetical
protein [Arabidopsis thaliana]
gi|332189442|gb|AEE27563.1| ribosomal RNA processing
protein 4 [Arabidopsis thaliana]
Length = 322
Score = 417 bits (1072), Expect = e-114
Identities = 208/325 (64%), Positives = 251/325 (77%), Gaps = 1/325 (0%)
Frame = +2
Query: 134 MRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDGVLKGHGTSEIE 313
MR +Q+PL TQK ANSDASV V D+IPVN +D LKGHGTSE++
Sbjct: 3 MRKLQLPLSQTQKVRFERAIERLQSLSSSANSDASVIVTDSIPVNHDDAFLKGHGTSEVD 62
Query: 314 GSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQDAVLM 493
G ++ATVCGVVERV+KLVYVR LRARYKPEVGDI+VGRVIEVA KRWR+E+NF+QD VLM
Sbjct: 63 GELLATVCGVVERVDKLVYVRTLRARYKPEVGDIVVGRVIEVAQKRWRVELNFNQDGVLM 122
Query: 494 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERG 670
LSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+G
Sbjct: 123 LSSMNMPDGIQRRRTSVDELNMRNIFVEHDVVCAEVRNFQHDGSLQLQARSQKYGKLEKG 182
Query: 671 QLLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAKDDMVVDQMDKSEQQSD 850
QLL + PYLVKR K HFH+++ GIDLI+GCNGFIW+GEHVE +D M +D E S
Sbjct: 183 QLLKVDPYLVKRSKHHFHYVESLGIDLIIGCNGFIWVGEHVEVRDPMAIDDQKDEEMISS 242
Query: 851 ESGIPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIALNHDIH 1030
S +E+ H PLETR+ ICR+ NA+RVLS LGF V++EVI E V +S + N DIH
Sbjct: 243 SS-----TGKEQSHIPLETRQTICRIGNAIRVLSNLGFTVTLEVIMETVNLSNSKNIDIH 297
Query: 1031 EMLGPEFYVLVAEKEVQRRLSTKKR 1105
+MLG EF+V+VAE E +RR + +K+
Sbjct: 298 DMLGSEFHVVVAENEAERRRTKRKK 322
>ref|XP_002447269.1| hypothetical protein SORBIDRAFT_06g031660 [Sorghum bicolor]
gi|241938452|gb|EES11597.1| hypothetical protein
SORBIDRAFT_06g031660 [Sorghum bicolor]
Length = 319
Score = 416 bits (1070), Expect = e-114
Identities = 219/327 (66%), Positives = 251/327 (76%), Gaps = 1/327 (0%)
Frame = +2
Query: 134 MRGVQIPLDNTQKXXXXXXXXXXXXXXXKANSDASVTVADTIPVNLEDGVLKGHGTSEIE 313
M+ + L+ TQ+ A S A+VTVADTIPVN ED +LKGHGTS+ +
Sbjct: 1 MKDRHLSLNQTQRVRLEAALHELQSLAPAAASAAAVTVADTIPVNQEDNILKGHGTSDQD 60
Query: 314 GSVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRLEINFSQDAVLM 493
G VVAT+CGVVERVNKLVYVR LRARYKPEVGDIIVGRVIE+APKRWRLEINFSQDAVLM
Sbjct: 61 GEVVATLCGVVERVNKLVYVRTLRARYKPEVGDIIVGRVIEIAPKRWRLEINFSQDAVLM 120
Query: 494 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERG 670
LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG LHLQARS+KYGKLERG
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGSLHLQARSEKYGKLERG 180
Query: 671 QLLNISPYLVKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVEAKDDMVVDQMDKSEQQSD 850
QLL + PYLVKR+KQHFHHL+QY +DLILGCNGFIW+GEHV VV + K+
Sbjct: 181 QLLMVPPYLVKRKKQHFHHLEQYNVDLILGCNGFIWVGEHV------VVGETTKT----- 229
Query: 851 ESGIPLTYEQERGHTPLETRKYICRVANAVRVLSTLGFMVSVEVITEIVEMSIALNHDIH 1030
G + TPLETRK+ICR+ANAVRVLS LGF + VE+I E +E S++ N +I+
Sbjct: 230 TGGQQRFSTEAENFTPLETRKHICRLANAVRVLSALGFTLIVELIIETMEASVSSNVEIN 289
Query: 1031 EMLGPEFYVLVAEKEVQRRLSTKKR*N 1111
MLG EFYV AE+E +RR ++ N
Sbjct: 290 AMLGAEFYVQTAEREAKRRADLLRKKN 316