BLASTX nr result

ID: Catharanthus23_contig00001794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00001794
         (957 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302141.2| hypothetical protein POPTR_0002s06010g [Popu...    62   3e-07

>ref|XP_002302141.2| hypothetical protein POPTR_0002s06010g [Populus trichocarpa]
           gi|566156476|ref|XP_006386284.1| hypothetical protein
           POPTR_0002s06010g [Populus trichocarpa]
           gi|550344374|gb|EEE81414.2| hypothetical protein
           POPTR_0002s06010g [Populus trichocarpa]
           gi|550344375|gb|ERP64081.1| hypothetical protein
           POPTR_0002s06010g [Populus trichocarpa]
          Length = 390

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 41/102 (40%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
 Frame = -1

Query: 615 MDEPLIFKKAAAAETSNRAPSPR------YININPSRQQTNYVFVNGDTLTSPSKTPNSP 454
           MDEP +  K  A E S   PSPR      Y+++  S +Q+    V  D +     TPN+ 
Sbjct: 1   MDEPFL-SKTIAEEISR--PSPRREHPSNYLDLGQSLRQSTAHLVTNDVIIPIITTPNTS 57

Query: 453 XXXXXXXXXXXXKTRLTGRSHSAPSVLTDTKEEFCDSLEPRR 328
                       KTRL  RSHSAPSV TD+KE F DS +PR+
Sbjct: 58  SFVNLIANLNKEKTRLAHRSHSAPSVFTDSKESFTDSFDPRQ 99


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