BLASTX nr result
ID: Catharanthus23_contig00001779
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00001779
(526 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006346087.1| PREDICTED: KH domain-containing protein At5g... 65 7e-09
ref|XP_006346086.1| PREDICTED: KH domain-containing protein At5g... 65 7e-09
ref|XP_004244007.1| PREDICTED: KH domain-containing protein At5g... 65 7e-09
ref|XP_004244006.1| PREDICTED: KH domain-containing protein At5g... 65 7e-09
ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g... 65 1e-08
ref|XP_004953739.1| PREDICTED: KH domain-containing protein At5g... 61 1e-07
ref|XP_002454368.1| hypothetical protein SORBIDRAFT_04g029520 [S... 61 1e-07
gb|EOY11853.1| RNA-binding KH domain-containing protein [Theobro... 61 2e-07
ref|XP_002299073.2| KH domain-containing family protein [Populus... 60 2e-07
ref|XP_006857601.1| hypothetical protein AMTR_s00061p00100880 [A... 60 2e-07
gb|ABK93571.1| unknown [Populus trichocarpa] 60 2e-07
ref|XP_004294880.1| PREDICTED: KH domain-containing protein At5g... 60 3e-07
ref|NP_200425.1| KH domain-containing protein [Arabidopsis thali... 60 4e-07
ref|XP_002864436.1| KH domain-containing protein [Arabidopsis ly... 60 4e-07
dbj|BAH57043.1| AT5G56140 [Arabidopsis thaliana] 60 4e-07
gb|EAY87341.1| hypothetical protein OsI_08744 [Oryza sativa Indi... 59 5e-07
ref|XP_006474774.1| PREDICTED: KH domain-containing protein At5g... 59 7e-07
ref|XP_006452752.1| hypothetical protein CICLE_v10009077mg [Citr... 59 7e-07
ref|XP_006452750.1| hypothetical protein CICLE_v10009077mg [Citr... 59 7e-07
ref|XP_006452747.1| hypothetical protein CICLE_v10009077mg [Citr... 59 7e-07
>ref|XP_006346087.1| PREDICTED: KH domain-containing protein At5g56140-like isoform X2
[Solanum tuberosum]
Length = 289
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/69 (53%), Positives = 39/69 (56%)
Frame = +1
Query: 319 MSSGRYMAYXXXXXXXXXXXIGTXXXXXXXXXXXXXVEQEKYLTELLQERHKLGPFTPVL 498
MSSGRYMAY I EQEKYL+ELL ERHKLGPF PVL
Sbjct: 1 MSSGRYMAYSPSPSAPQSPHIA-----GLRSASSAIAEQEKYLSELLAERHKLGPFVPVL 55
Query: 499 PNSYRLLNQ 525
P+ YRLLNQ
Sbjct: 56 PHCYRLLNQ 64
>ref|XP_006346086.1| PREDICTED: KH domain-containing protein At5g56140-like isoform X1
[Solanum tuberosum]
Length = 293
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/69 (53%), Positives = 39/69 (56%)
Frame = +1
Query: 319 MSSGRYMAYXXXXXXXXXXXIGTXXXXXXXXXXXXXVEQEKYLTELLQERHKLGPFTPVL 498
MSSGRYMAY I EQEKYL+ELL ERHKLGPF PVL
Sbjct: 1 MSSGRYMAYSPSPSAPQSPHIA-----GLRSASSAIAEQEKYLSELLAERHKLGPFVPVL 55
Query: 499 PNSYRLLNQ 525
P+ YRLLNQ
Sbjct: 56 PHCYRLLNQ 64
>ref|XP_004244007.1| PREDICTED: KH domain-containing protein At5g56140-like isoform 2
[Solanum lycopersicum]
Length = 295
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/69 (53%), Positives = 39/69 (56%)
Frame = +1
Query: 319 MSSGRYMAYXXXXXXXXXXXIGTXXXXXXXXXXXXXVEQEKYLTELLQERHKLGPFTPVL 498
MSSGRYMAY I EQEKYL+ELL ERHKLGPF PVL
Sbjct: 1 MSSGRYMAYSPSPSAPQSPHIA-----GLRSASSAIAEQEKYLSELLAERHKLGPFVPVL 55
Query: 499 PNSYRLLNQ 525
P+ YRLLNQ
Sbjct: 56 PHCYRLLNQ 64
>ref|XP_004244006.1| PREDICTED: KH domain-containing protein At5g56140-like isoform 1
[Solanum lycopersicum]
Length = 299
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/69 (53%), Positives = 39/69 (56%)
Frame = +1
Query: 319 MSSGRYMAYXXXXXXXXXXXIGTXXXXXXXXXXXXXVEQEKYLTELLQERHKLGPFTPVL 498
MSSGRYMAY I EQEKYL+ELL ERHKLGPF PVL
Sbjct: 1 MSSGRYMAYSPSPSAPQSPHIA-----GLRSASSAIAEQEKYLSELLAERHKLGPFVPVL 55
Query: 499 PNSYRLLNQ 525
P+ YRLLNQ
Sbjct: 56 PHCYRLLNQ 64
>ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g56140 isoform 1 [Vitis
vinifera] gi|296089986|emb|CBI39805.3| unnamed protein
product [Vitis vinifera]
Length = 287
Score = 64.7 bits (156), Expect = 1e-08
Identities = 37/69 (53%), Positives = 40/69 (57%)
Frame = +1
Query: 319 MSSGRYMAYXXXXXXXXXXXIGTXXXXXXXXXXXXXVEQEKYLTELLQERHKLGPFTPVL 498
MSSGRYMAY + VEQEKYL+ELL ERHKL PF PVL
Sbjct: 1 MSSGRYMAYSPSPSTAPH----SPHIAGLRSATSALVEQEKYLSELLAERHKLSPFMPVL 56
Query: 499 PNSYRLLNQ 525
P+SYRLLNQ
Sbjct: 57 PHSYRLLNQ 65
>ref|XP_004953739.1| PREDICTED: KH domain-containing protein At5g56140-like [Setaria
italica]
Length = 286
Score = 61.2 bits (147), Expect = 1e-07
Identities = 35/69 (50%), Positives = 38/69 (55%)
Frame = +1
Query: 319 MSSGRYMAYXXXXXXXXXXXIGTXXXXXXXXXXXXXVEQEKYLTELLQERHKLGPFTPVL 498
MSSGRYMAY + EQEKYL ELL ERHKLGPF PV+
Sbjct: 1 MSSGRYMAYSPSPSTTPH----SPRIAGLRAPSAAVAEQEKYLAELLAERHKLGPFIPVI 56
Query: 499 PNSYRLLNQ 525
P+S RLLNQ
Sbjct: 57 PHSVRLLNQ 65
>ref|XP_002454368.1| hypothetical protein SORBIDRAFT_04g029520 [Sorghum bicolor]
gi|241934199|gb|EES07344.1| hypothetical protein
SORBIDRAFT_04g029520 [Sorghum bicolor]
Length = 286
Score = 61.2 bits (147), Expect = 1e-07
Identities = 35/69 (50%), Positives = 38/69 (55%)
Frame = +1
Query: 319 MSSGRYMAYXXXXXXXXXXXIGTXXXXXXXXXXXXXVEQEKYLTELLQERHKLGPFTPVL 498
MSSGRYMAY + EQEKYL ELL ERHKLGPF PV+
Sbjct: 1 MSSGRYMAYSPSPSTTPH----SPRIGGLRTPSAAVAEQEKYLAELLAERHKLGPFIPVI 56
Query: 499 PNSYRLLNQ 525
P+S RLLNQ
Sbjct: 57 PHSVRLLNQ 65
>gb|EOY11853.1| RNA-binding KH domain-containing protein [Theobroma cacao]
Length = 312
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/66 (46%), Positives = 37/66 (56%)
Frame = +1
Query: 328 GRYMAYXXXXXXXXXXXIGTXXXXXXXXXXXXXVEQEKYLTELLQERHKLGPFTPVLPNS 507
GRYMAY + ++QEKYL+ELL ERHKL PF PVLP++
Sbjct: 9 GRYMAYSPSPSAPHSPHLSGLRSAAAAASSAAFLDQEKYLSELLAERHKLSPFMPVLPHT 68
Query: 508 YRLLNQ 525
YRLLNQ
Sbjct: 69 YRLLNQ 74
>ref|XP_002299073.2| KH domain-containing family protein [Populus trichocarpa]
gi|550350090|gb|EEE83878.2| KH domain-containing family
protein [Populus trichocarpa]
Length = 302
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +1
Query: 427 VEQEKYLTELLQERHKLGPFTPVLPNSYRLLNQ 525
VEQEKYL+ELL ERHK+ PF PVLPN+YRLLNQ
Sbjct: 45 VEQEKYLSELLAERHKISPFLPVLPNTYRLLNQ 77
>ref|XP_006857601.1| hypothetical protein AMTR_s00061p00100880 [Amborella trichopoda]
gi|548861697|gb|ERN19068.1| hypothetical protein
AMTR_s00061p00100880 [Amborella trichopoda]
Length = 286
Score = 60.5 bits (145), Expect = 2e-07
Identities = 35/69 (50%), Positives = 39/69 (56%)
Frame = +1
Query: 319 MSSGRYMAYXXXXXXXXXXXIGTXXXXXXXXXXXXXVEQEKYLTELLQERHKLGPFTPVL 498
MSSGRYMAY T VEQ+KYL+ELL ER KLGPF VL
Sbjct: 1 MSSGRYMAYSPSP--------STAPHSPFRSAATALVEQDKYLSELLAERQKLGPFMQVL 52
Query: 499 PNSYRLLNQ 525
P+SYR+LNQ
Sbjct: 53 PHSYRVLNQ 61
>gb|ABK93571.1| unknown [Populus trichocarpa]
Length = 89
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +1
Query: 427 VEQEKYLTELLQERHKLGPFTPVLPNSYRLLNQ 525
VEQEKYL+ELL ERHK+ PF PVLPN+YRLLNQ
Sbjct: 45 VEQEKYLSELLAERHKISPFLPVLPNTYRLLNQ 77
>ref|XP_004294880.1| PREDICTED: KH domain-containing protein At5g56140-like [Fragaria
vesca subsp. vesca]
Length = 297
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/66 (51%), Positives = 36/66 (54%)
Frame = +1
Query: 328 GRYMAYXXXXXXXXXXXIGTXXXXXXXXXXXXXVEQEKYLTELLQERHKLGPFTPVLPNS 507
GRYMAY I EQEKYL+ELL ERHKLGPF PVLPN
Sbjct: 9 GRYMAYSPSLSAPLSPHIS---GLRSSSAAALVAEQEKYLSELLGERHKLGPFLPVLPNC 65
Query: 508 YRLLNQ 525
+RLLNQ
Sbjct: 66 FRLLNQ 71
>ref|NP_200425.1| KH domain-containing protein [Arabidopsis thaliana]
gi|75262628|sp|Q9FKT4.1|QKIL2_ARATH RecName: Full=KH
domain-containing protein At5g56140; AltName:
Full=Quaking-like protein 2 gi|9758634|dbj|BAB09296.1|
RNA-binding protein-like [Arabidopsis thaliana]
gi|24030184|gb|AAN41273.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|332009342|gb|AED96725.1| KH
domain-containing protein [Arabidopsis thaliana]
Length = 315
Score = 59.7 bits (143), Expect = 4e-07
Identities = 37/86 (43%), Positives = 42/86 (48%)
Frame = +1
Query: 268 GGLVGGSKRDIAGR*KNMSSGRYMAYXXXXXXXXXXXIGTXXXXXXXXXXXXXVEQEKYL 447
GG GGS I G GR+M Y VEQEKYL
Sbjct: 11 GGGGGGSGGGIGGG----GGGRFMTYSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYL 66
Query: 448 TELLQERHKLGPFTPVLPNSYRLLNQ 525
+ELL ERHKL PF PVLP+++RLLNQ
Sbjct: 67 SELLAERHKLTPFLPVLPHAFRLLNQ 92
>ref|XP_002864436.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297310271|gb|EFH40695.1| KH domain-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 308
Score = 59.7 bits (143), Expect = 4e-07
Identities = 36/86 (41%), Positives = 41/86 (47%)
Frame = +1
Query: 268 GGLVGGSKRDIAGR*KNMSSGRYMAYXXXXXXXXXXXIGTXXXXXXXXXXXXXVEQEKYL 447
GG GG + G GR+M Y VEQEKYL
Sbjct: 5 GGGGGGGGSGVGGG----GGGRFMTYSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYL 60
Query: 448 TELLQERHKLGPFTPVLPNSYRLLNQ 525
+ELL ERHKL PF PVLP++YRLLNQ
Sbjct: 61 SELLAERHKLTPFLPVLPHAYRLLNQ 86
>dbj|BAH57043.1| AT5G56140 [Arabidopsis thaliana]
Length = 104
Score = 59.7 bits (143), Expect = 4e-07
Identities = 37/86 (43%), Positives = 42/86 (48%)
Frame = +1
Query: 268 GGLVGGSKRDIAGR*KNMSSGRYMAYXXXXXXXXXXXIGTXXXXXXXXXXXXXVEQEKYL 447
GG GGS I G GR+M Y VEQEKYL
Sbjct: 11 GGGGGGSGGGIGGG----GGGRFMTYSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYL 66
Query: 448 TELLQERHKLGPFTPVLPNSYRLLNQ 525
+ELL ERHKL PF PVLP+++RLLNQ
Sbjct: 67 SELLAERHKLTPFLPVLPHAFRLLNQ 92
>gb|EAY87341.1| hypothetical protein OsI_08744 [Oryza sativa Indica Group]
gi|215769394|dbj|BAH01623.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 286
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/69 (49%), Positives = 37/69 (53%)
Frame = +1
Query: 319 MSSGRYMAYXXXXXXXXXXXIGTXXXXXXXXXXXXXVEQEKYLTELLQERHKLGPFTPVL 498
M+SGRYMAY + +QEKYL ELL ERHKL PF PVL
Sbjct: 1 MASGRYMAYSPSPSTTPH----SPRIPGLRAASSAVADQEKYLAELLAERHKLSPFIPVL 56
Query: 499 PNSYRLLNQ 525
PNS RLLNQ
Sbjct: 57 PNSVRLLNQ 65
>ref|XP_006474774.1| PREDICTED: KH domain-containing protein At5g56140-like [Citrus
sinensis]
Length = 292
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +1
Query: 427 VEQEKYLTELLQERHKLGPFTPVLPNSYRLLNQ 525
++QEKYL+ELL ERHKL PF PVLPN+YRLLNQ
Sbjct: 35 LDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQ 67
>ref|XP_006452752.1| hypothetical protein CICLE_v10009077mg [Citrus clementina]
gi|557555978|gb|ESR65992.1| hypothetical protein
CICLE_v10009077mg [Citrus clementina]
Length = 279
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +1
Query: 427 VEQEKYLTELLQERHKLGPFTPVLPNSYRLLNQ 525
++QEKYL+ELL ERHKL PF PVLPN+YRLLNQ
Sbjct: 35 LDQEKYLSELLAERHKLNPFLPVLPNTYRLLNQ 67
>ref|XP_006452750.1| hypothetical protein CICLE_v10009077mg [Citrus clementina]
gi|557555976|gb|ESR65990.1| hypothetical protein
CICLE_v10009077mg [Citrus clementina]
Length = 196
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +1
Query: 427 VEQEKYLTELLQERHKLGPFTPVLPNSYRLLNQ 525
++QEKYL+ELL ERHKL PF PVLPN+YRLLNQ
Sbjct: 35 LDQEKYLSELLAERHKLNPFLPVLPNTYRLLNQ 67
>ref|XP_006452747.1| hypothetical protein CICLE_v10009077mg [Citrus clementina]
gi|557555973|gb|ESR65987.1| hypothetical protein
CICLE_v10009077mg [Citrus clementina]
Length = 292
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +1
Query: 427 VEQEKYLTELLQERHKLGPFTPVLPNSYRLLNQ 525
++QEKYL+ELL ERHKL PF PVLPN+YRLLNQ
Sbjct: 35 LDQEKYLSELLAERHKLNPFLPVLPNTYRLLNQ 67