BLASTX nr result
ID: Catharanthus23_contig00001775
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00001775
(589 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006480988.1| PREDICTED: 30S ribosomal protein S31, chloro... 70 5e-10
ref|XP_006429326.1| hypothetical protein CICLE_v10013049mg [Citr... 70 5e-10
ref|XP_002531346.1| structural constituent of ribosome, putative... 69 7e-10
ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloro... 67 3e-09
emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera] 67 3e-09
ref|XP_006355664.1| PREDICTED: 30S ribosomal protein S31, chloro... 67 5e-09
ref|XP_004239932.1| PREDICTED: 30S ribosomal protein S31, chloro... 66 6e-09
ref|XP_004147884.1| PREDICTED: 30S ribosomal protein S31, chloro... 65 1e-08
gb|EOY07263.1| Plastid-specific ribosomal protein 4 [Theobroma c... 65 2e-08
ref|XP_002322970.1| PLASTID-SPECIFIC RIBOSOMAL protein 4 [Populu... 65 2e-08
ref|XP_006848174.1| hypothetical protein AMTR_s00029p00235620 [A... 64 3e-08
ref|XP_004302672.1| PREDICTED: 30S ribosomal protein S31, chloro... 64 3e-08
gb|AFK38352.1| unknown [Lotus japonicus] 64 4e-08
ref|XP_006296531.1| hypothetical protein CARUB_v10025723mg [Caps... 63 7e-08
ref|NP_181349.1| plastid-specific ribosomal protein 4 [Arabidop... 63 7e-08
gb|ESW24913.1| hypothetical protein PHAVU_004G171400g [Phaseolus... 62 9e-08
gb|ESW05912.1| hypothetical protein PHAVU_010G003200g [Phaseolus... 62 9e-08
gb|EMJ07357.1| hypothetical protein PRUPE_ppa013536mg [Prunus pe... 62 1e-07
ref|XP_006411016.1| hypothetical protein EUTSA_v10017376mg [Eutr... 62 1e-07
gb|AGS43132.1| hypothetical protein, partial [Zea mays] 62 1e-07
>ref|XP_006480988.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Citrus
sinensis]
Length = 144
Score = 69.7 bits (169), Expect = 5e-10
Identities = 39/110 (35%), Positives = 49/110 (44%)
Frame = +2
Query: 71 MASLLVGAVPVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTLPLIYCGRGDKKTARG 250
MASLLVGA+P+ ++P +YCGRGDKKTA+G
Sbjct: 32 MASLLVGALPLTPQSRISSSQSQILGTPLSLSCSLSLPSTPSPSIPYVYCGRGDKKTAKG 91
Query: 251 KRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVKIEIDESL 400
KRFNHSFGN +DDGE + I++DESL
Sbjct: 92 KRFNHSFGNARPRDKKKGRGPPRVTAPPAPPRKDRFDDGEKIHIDLDESL 141
>ref|XP_006429326.1| hypothetical protein CICLE_v10013049mg [Citrus clementina]
gi|557531383|gb|ESR42566.1| hypothetical protein
CICLE_v10013049mg [Citrus clementina]
Length = 144
Score = 69.7 bits (169), Expect = 5e-10
Identities = 39/110 (35%), Positives = 49/110 (44%)
Frame = +2
Query: 71 MASLLVGAVPVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTLPLIYCGRGDKKTARG 250
MASLLVGA+P+ ++P +YCGRGDKKTA+G
Sbjct: 32 MASLLVGALPLTPQSRISSSQSQILGTPLSLSCSLSVPSTPSPSIPYVYCGRGDKKTAKG 91
Query: 251 KRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVKIEIDESL 400
KRFNHSFGN +DDGE + I++DESL
Sbjct: 92 KRFNHSFGNARPRDKKKGRGPPRVTAPPAPPRKDRFDDGEKIHIDLDESL 141
>ref|XP_002531346.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223529044|gb|EEF31030.1| structural constituent of
ribosome, putative [Ricinus communis]
Length = 116
Score = 69.3 bits (168), Expect = 7e-10
Identities = 33/66 (50%), Positives = 39/66 (59%)
Frame = +2
Query: 203 LPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVKI 382
+P +YCGRGDKKTA+GKRFNHSFGN ++DGEVVKI
Sbjct: 50 IPFVYCGRGDKKTAKGKRFNHSFGNARPRNKNKGRGPPRIPVPSSPPTNDIFEDGEVVKI 109
Query: 383 EIDESL 400
+IDESL
Sbjct: 110 DIDESL 115
>ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Vitis
vinifera] gi|297740225|emb|CBI30407.3| unnamed protein
product [Vitis vinifera]
Length = 118
Score = 67.0 bits (162), Expect = 3e-09
Identities = 33/66 (50%), Positives = 38/66 (57%)
Frame = +2
Query: 203 LPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVKI 382
+P +YCGRGDKKTA+GKRFNHSFGN ++D EVVKI
Sbjct: 51 IPSVYCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKI 110
Query: 383 EIDESL 400
EIDESL
Sbjct: 111 EIDESL 116
>emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]
Length = 117
Score = 67.0 bits (162), Expect = 3e-09
Identities = 33/66 (50%), Positives = 38/66 (57%)
Frame = +2
Query: 203 LPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVKI 382
+P +YCGRGDKKTA+GKRFNHSFGN ++D EVVKI
Sbjct: 50 IPSVYCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKI 109
Query: 383 EIDESL 400
EIDESL
Sbjct: 110 EIDESL 115
>ref|XP_006355664.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Solanum
tuberosum]
Length = 121
Score = 66.6 bits (161), Expect = 5e-09
Identities = 33/64 (51%), Positives = 37/64 (57%)
Frame = +2
Query: 203 LPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVKI 382
LPLIYCGRGDKKTA+GKRFNHSFGN +DDG+VVKI
Sbjct: 57 LPLIYCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRVAAPPAAPKRDPFDDGQVVKI 116
Query: 383 EIDE 394
EI +
Sbjct: 117 EIHD 120
>ref|XP_004239932.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Solanum
lycopersicum]
Length = 121
Score = 66.2 bits (160), Expect = 6e-09
Identities = 32/64 (50%), Positives = 37/64 (57%)
Frame = +2
Query: 203 LPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVKI 382
LPL+YCGRGDKKTA+GKRFNHSFGN +DDG+VVKI
Sbjct: 57 LPLVYCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRVAAPPAAPKRDPFDDGQVVKI 116
Query: 383 EIDE 394
EI +
Sbjct: 117 EIHD 120
>ref|XP_004147884.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Cucumis
sativus] gi|449520074|ref|XP_004167059.1| PREDICTED: 30S
ribosomal protein S31, chloroplastic-like [Cucumis
sativus]
Length = 118
Score = 65.5 bits (158), Expect = 1e-08
Identities = 32/67 (47%), Positives = 37/67 (55%)
Frame = +2
Query: 200 TLPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVK 379
++P IYCGRGDKKT RGKRFNHS+GN +DD E +K
Sbjct: 49 SIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIK 108
Query: 380 IEIDESL 400
IEIDESL
Sbjct: 109 IEIDESL 115
>gb|EOY07263.1| Plastid-specific ribosomal protein 4 [Theobroma cacao]
Length = 121
Score = 64.7 bits (156), Expect = 2e-08
Identities = 31/67 (46%), Positives = 37/67 (55%)
Frame = +2
Query: 200 TLPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVK 379
++P +YCGRGDKKT +GKRFNHSFGN +DD E +K
Sbjct: 52 SIPYVYCGRGDKKTKKGKRFNHSFGNARPRNKKKGRGPPRVPIPPSPPRKDKFDDDEKIK 111
Query: 380 IEIDESL 400
IEIDESL
Sbjct: 112 IEIDESL 118
>ref|XP_002322970.1| PLASTID-SPECIFIC RIBOSOMAL protein 4 [Populus trichocarpa]
gi|222867600|gb|EEF04731.1| PLASTID-SPECIFIC RIBOSOMAL
protein 4 [Populus trichocarpa]
Length = 113
Score = 64.7 bits (156), Expect = 2e-08
Identities = 41/113 (36%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Frame = +2
Query: 71 MASLLVGAVPVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV--TLPLIYCGRGDKKTA 244
MASL+VGA+P+ ++P +YCGRGD+KT
Sbjct: 1 MASLMVGAIPMTPQALNFGSRLSYSQSQISLCHSTSSLPLSTARTSVPFVYCGRGDRKTE 60
Query: 245 RGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVKIEIDESLG 403
RGKRFNHSFGN D EVVKIEIDESLG
Sbjct: 61 RGKRFNHSFGNARPRDKKKGRGPPRIPVPGAPPKIDKSVDDEVVKIEIDESLG 113
>ref|XP_006848174.1| hypothetical protein AMTR_s00029p00235620 [Amborella trichopoda]
gi|548851479|gb|ERN09755.1| hypothetical protein
AMTR_s00029p00235620 [Amborella trichopoda]
Length = 120
Score = 63.9 bits (154), Expect = 3e-08
Identities = 30/65 (46%), Positives = 38/65 (58%)
Frame = +2
Query: 206 PLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVKIE 385
P ++CGRGD+KTA+GKRF+HSFGN +DDGEVVKI+
Sbjct: 53 PSVFCGRGDRKTAKGKRFSHSFGNARPRNKKKGRGPPRVPAPPLPPKKDRFDDGEVVKIQ 112
Query: 386 IDESL 400
IDES+
Sbjct: 113 IDESI 117
>ref|XP_004302672.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 117
Score = 63.9 bits (154), Expect = 3e-08
Identities = 31/67 (46%), Positives = 37/67 (55%)
Frame = +2
Query: 200 TLPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVK 379
++P +YCGRGDKKT RGKRFNHSFGN ++D VVK
Sbjct: 50 SVPSVYCGRGDKKTERGKRFNHSFGNARPRNKKKGRGSPRVPVPAAPPKKDKFEDDSVVK 109
Query: 380 IEIDESL 400
+EIDESL
Sbjct: 110 VEIDESL 116
>gb|AFK38352.1| unknown [Lotus japonicus]
Length = 121
Score = 63.5 bits (153), Expect = 4e-08
Identities = 31/65 (47%), Positives = 36/65 (55%)
Frame = +2
Query: 206 PLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVKIE 385
P +YCGRGD+KT RGKRFNHSFGN ++D EVVKI+
Sbjct: 54 PSVYCGRGDRKTERGKRFNHSFGNARPKDKKKGRGPPRLYAPPAPTKKDKFEDNEVVKID 113
Query: 386 IDESL 400
IDESL
Sbjct: 114 IDESL 118
>ref|XP_006296531.1| hypothetical protein CARUB_v10025723mg [Capsella rubella]
gi|482565239|gb|EOA29429.1| hypothetical protein
CARUB_v10025723mg [Capsella rubella]
Length = 118
Score = 62.8 bits (151), Expect = 7e-08
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = +2
Query: 200 TLPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVK 379
++PL+YCGRGD+KTA+GKRFNHSFGN +++ E +K
Sbjct: 49 SIPLVYCGRGDRKTAKGKRFNHSFGNARPRNKNKGRGPERVPVPPAPPRKDKFENDEKIK 108
Query: 380 IEIDESL 400
I+IDESL
Sbjct: 109 IDIDESL 115
>ref|NP_181349.1| plastid-specific ribosomal protein 4 [Arabidopsis thaliana]
gi|75275034|sp|O80439.1|RR31_ARATH RecName: Full=30S
ribosomal protein S31, chloroplastic; AltName:
Full=Plastid-specific 30S ribosomal protein 4;
Short=PSRP-4; Flags: Precursor
gi|7578852|gb|AAF64153.1|AF236826_1 plastid-specific
ribosomal protein 4 precursor [Arabidopsis thaliana]
gi|3335362|gb|AAC27163.1| 30S ribosomal protein S31
[Arabidopsis thaliana] gi|15529182|gb|AAK97685.1|
At2g38140/F16M14.7 [Arabidopsis thaliana]
gi|16974357|gb|AAL31104.1| At2g38140/F16M14.7
[Arabidopsis thaliana] gi|21618289|gb|AAM67339.1| 30S
ribosomal protein S31 [Arabidopsis thaliana]
gi|330254400|gb|AEC09494.1| plastid-specific ribosomal
protein 4 [Arabidopsis thaliana]
Length = 118
Score = 62.8 bits (151), Expect = 7e-08
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = +2
Query: 200 TLPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVK 379
++PL+YCGRGD+KTA+GKRFNHSFGN +++ E +K
Sbjct: 49 SIPLVYCGRGDRKTAKGKRFNHSFGNARPRNKSKGRGPERVPVPPAPPRKDKFENDEKIK 108
Query: 380 IEIDESL 400
I+IDESL
Sbjct: 109 IDIDESL 115
>gb|ESW24913.1| hypothetical protein PHAVU_004G171400g [Phaseolus vulgaris]
Length = 121
Score = 62.4 bits (150), Expect = 9e-08
Identities = 31/65 (47%), Positives = 36/65 (55%)
Frame = +2
Query: 206 PLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVKIE 385
P +YCGRGD+KTA+GKRF HSFGN ++D EVVKIE
Sbjct: 54 PSVYCGRGDRKTAKGKRFAHSFGNARPKDKKKGRGPPRIYAPPAPSKRDRFEDNEVVKIE 113
Query: 386 IDESL 400
IDESL
Sbjct: 114 IDESL 118
>gb|ESW05912.1| hypothetical protein PHAVU_010G003200g [Phaseolus vulgaris]
Length = 121
Score = 62.4 bits (150), Expect = 9e-08
Identities = 31/65 (47%), Positives = 36/65 (55%)
Frame = +2
Query: 206 PLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVKIE 385
P +YCGRGD+KTA+GKRF HSFGN ++D EVVKIE
Sbjct: 54 PSVYCGRGDRKTAKGKRFAHSFGNARPKDKKKGRGPPRIYAPPAPSKKNRFEDNEVVKIE 113
Query: 386 IDESL 400
IDESL
Sbjct: 114 IDESL 118
>gb|EMJ07357.1| hypothetical protein PRUPE_ppa013536mg [Prunus persica]
Length = 117
Score = 62.0 bits (149), Expect = 1e-07
Identities = 30/66 (45%), Positives = 36/66 (54%)
Frame = +2
Query: 203 LPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVKI 382
+P +YCGRGDKKT RGKRFNHS+GN ++D VVK+
Sbjct: 51 VPSVYCGRGDKKTERGKRFNHSYGNARPRNKNKGRGPPRVPVPVAPPKKDKFEDDTVVKV 110
Query: 383 EIDESL 400
EIDESL
Sbjct: 111 EIDESL 116
>ref|XP_006411016.1| hypothetical protein EUTSA_v10017376mg [Eutrema salsugineum]
gi|557112185|gb|ESQ52469.1| hypothetical protein
EUTSA_v10017376mg [Eutrema salsugineum]
Length = 149
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/67 (41%), Positives = 39/67 (58%)
Frame = +2
Query: 200 TLPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVK 379
++PL+YCGRGD+KTA+GKRFNHSFGN +++ + +K
Sbjct: 80 SIPLVYCGRGDRKTAKGKRFNHSFGNARPRNKNKGRGPQRVPVPPAPPRKDKFENDDKIK 139
Query: 380 IEIDESL 400
I+IDESL
Sbjct: 140 IDIDESL 146
>gb|AGS43132.1| hypothetical protein, partial [Zea mays]
Length = 82
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/63 (44%), Positives = 34/63 (53%)
Frame = +2
Query: 212 IYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXXYDDGEVVKIEID 391
+YCGRGDKKT RGKRFNHS+GN +DDGE++ IEID
Sbjct: 18 VYCGRGDKKTKRGKRFNHSYGNARPRNKKKGTGPARLFAPPAPPRKDQFDDGEIISIEID 77
Query: 392 ESL 400
E +
Sbjct: 78 EDI 80