BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00001653
         (1028 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Popu...   261   2e-67
ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II su...   260   5e-67
ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527...   260   7e-67
gb|EOX92292.1| RNA polymerase II, Rpb4, core protein isoform 1 [...   260   7e-67
ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycin...   260   7e-67
gb|ESW06234.1| hypothetical protein PHAVU_010G030200g [Phaseolus...   259   9e-67
ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citr...   259   9e-67
gb|AFK35928.1| unknown [Lotus japonicus]                              259   9e-67
ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II su...   258   2e-66
ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycin...   258   2e-66
ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ri...   258   3e-66
ref|XP_006361114.1| PREDICTED: DNA-directed RNA polymerase II su...   257   5e-66
ref|XP_004241362.1| PREDICTED: DNA-directed RNA polymerase II su...   256   8e-66
ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II su...   256   8e-66
ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 ...   256   8e-66
ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Caps...   254   3e-65
ref|NP_196554.1| RNA polymerase II, Rpb4, core protein [Arabidop...   254   4e-65
ref|XP_002871392.1| RPB15.9 [Arabidopsis lyrata subsp. lyrata] g...   254   4e-65
ref|NP_001236224.1| uncharacterized protein LOC100527704 [Glycin...   254   5e-65
gb|EMJ07326.1| hypothetical protein PRUPE_ppa013142mg [Prunus pe...   251   4e-64

>ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Populus trichocarpa]
           gi|224096326|ref|XP_002310604.1| hypothetical protein
           POPTR_0007s06660g [Populus trichocarpa]
           gi|222853507|gb|EEE91054.1| hypothetical protein
           POPTR_0007s06660g [Populus trichocarpa]
           gi|222856581|gb|EEE94128.1| hypothetical protein
           POPTR_0005s08690g [Populus trichocarpa]
          Length = 138

 Score =  261 bits (668), Expect = 2e-67
 Identities = 130/138 (94%), Positives = 136/138 (98%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENAAELKIGD+FLKAKCLMNCEVALILEHKYEQLQQMS+DPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDDFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+VRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIK +GRA D
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120

Query: 478 DEAIEKMLNDLSLVKKFE 425
           DEAIEKMLNDLSL+KKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138


>ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4 [Vitis
           vinifera] gi|147856183|emb|CAN80281.1| hypothetical
           protein VITISV_017448 [Vitis vinifera]
           gi|302143481|emb|CBI22042.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score =  260 bits (665), Expect = 5e-67
 Identities = 129/138 (93%), Positives = 136/138 (98%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENAAELKIGDEFLKAKCLMNCEVA+ILEHKYEQLQQMS+DP+NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVAVILEHKYEQLQQMSDDPLNQVSQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+VRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIK +GRA D
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120

Query: 478 DEAIEKMLNDLSLVKKFE 425
           DEAIEKMLNDLSL+KKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138


>ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527704 isoform X1 [Glycine
           max]
          Length = 138

 Score =  260 bits (664), Expect = 7e-67
 Identities = 129/138 (93%), Positives = 136/138 (98%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQ S+DPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+VRQVREIL+RY+LAEFELCVLGNLCPETVEEAIAMVPSIK+RGRA D
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYELAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQD 120

Query: 478 DEAIEKMLNDLSLVKKFE 425
           DEAIEKMLNDLSL+KKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138


>gb|EOX92292.1| RNA polymerase II, Rpb4, core protein isoform 1 [Theobroma cacao]
           gi|508700397|gb|EOX92293.1| RNA polymerase II, Rpb4,
           core protein isoform 1 [Theobroma cacao]
          Length = 138

 Score =  260 bits (664), Expect = 7e-67
 Identities = 129/138 (93%), Positives = 136/138 (98%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENAAELKIG+EFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGEEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQVSQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+VRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIK +GRA D
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120

Query: 478 DEAIEKMLNDLSLVKKFE 425
           D+AIE+MLNDLSL+KKFE
Sbjct: 121 DDAIERMLNDLSLIKKFE 138


>ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycine max]
           gi|255625623|gb|ACU13156.1| unknown [Glycine max]
          Length = 138

 Score =  260 bits (664), Expect = 7e-67
 Identities = 129/138 (93%), Positives = 136/138 (98%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ S+DPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQISQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+VRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSIK+RGRA D
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQD 120

Query: 478 DEAIEKMLNDLSLVKKFE 425
           DEAIEKMLNDLSL+KKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138


>gb|ESW06234.1| hypothetical protein PHAVU_010G030200g [Phaseolus vulgaris]
          Length = 138

 Score =  259 bits (663), Expect = 9e-67
 Identities = 129/138 (93%), Positives = 135/138 (97%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ S+DPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+VRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSIK RGRA D
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQD 120

Query: 478 DEAIEKMLNDLSLVKKFE 425
           DEAIEKMLNDLSL+KKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138


>ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
           gi|568884040|ref|XP_006494738.1| PREDICTED: DNA-directed
           RNA polymerase II subunit 4-like isoform X2 [Citrus
           sinensis] gi|557530000|gb|ESR41250.1| hypothetical
           protein CICLE_v10026735mg [Citrus clementina]
          Length = 138

 Score =  259 bits (663), Expect = 9e-67
 Identities = 129/138 (93%), Positives = 135/138 (97%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENAAELKIGDEFLKAKCLMNCEVA+IL+HKYEQLQQ S+DPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVAIILDHKYEQLQQTSDDPMNQVSQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+VRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIK RGRA D
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 120

Query: 478 DEAIEKMLNDLSLVKKFE 425
           DEAIEKMLNDLSL+KKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138


>gb|AFK35928.1| unknown [Lotus japonicus]
          Length = 138

 Score =  259 bits (663), Expect = 9e-67
 Identities = 129/138 (93%), Positives = 135/138 (97%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ S+DPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDPMNQVSQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+VRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSIK RGRA D
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQD 120

Query: 478 DEAIEKMLNDLSLVKKFE 425
           DEAIEKMLNDLSL+KKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138


>ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like [Cicer
           arietinum] gi|502155876|ref|XP_004510223.1| PREDICTED:
           DNA-directed RNA polymerase II subunit RPB4-like [Cicer
           arietinum]
          Length = 138

 Score =  258 bits (660), Expect = 2e-66
 Identities = 128/138 (92%), Positives = 135/138 (97%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENAAELKIGDEFLKAKCLMNCEV+LIL+HKYEQLQQ S+DPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILDHKYEQLQQSSDDPMNQVSQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+VRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSIK RGRA D
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQD 120

Query: 478 DEAIEKMLNDLSLVKKFE 425
           DEAIEKMLNDLSL+KKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138


>ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycine max]
           gi|255632071|gb|ACU16388.1| unknown [Glycine max]
          Length = 138

 Score =  258 bits (660), Expect = 2e-66
 Identities = 128/138 (92%), Positives = 136/138 (98%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ S+DPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+VRQVREIL+RYQLAEFELCVLGNLCPETVEEAIA+VPSIK+RGRA D
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAVVPSIKSRGRAQD 120

Query: 478 DEAIEKMLNDLSLVKKFE 425
           DEAIEKMLNDLSL+KKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138


>ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
           gi|223538818|gb|EEF40418.1| DNA-directed RNA polymerase
           II, putative [Ricinus communis]
          Length = 138

 Score =  258 bits (658), Expect = 3e-66
 Identities = 128/138 (92%), Positives = 134/138 (97%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENA+ELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMS DPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENASELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSNDPMNQVSQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+VRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIK +GRA D
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120

Query: 478 DEAIEKMLNDLSLVKKFE 425
           DEAIEKML DLS++KKFE
Sbjct: 121 DEAIEKMLTDLSMIKKFE 138


>ref|XP_006361114.1| PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Solanum
           tuberosum]
          Length = 138

 Score =  257 bits (657), Expect = 5e-66
 Identities = 128/138 (92%), Positives = 133/138 (96%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMS+DP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+VRQ REILSRY LAEFELCVLGNLCPETVEE IAMVPSIKNRGRALD
Sbjct: 61  YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIKNRGRALD 120

Query: 478 DEAIEKMLNDLSLVKKFE 425
           +EAIEKML DLSL+KKFE
Sbjct: 121 EEAIEKMLTDLSLIKKFE 138


>ref|XP_004241362.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like
           [Solanum lycopersicum]
          Length = 138

 Score =  256 bits (655), Expect = 8e-66
 Identities = 127/138 (92%), Positives = 133/138 (96%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQ+QQMS+DP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQIQQMSDDPTNQISQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+VRQ REILSRY LAEFELCVLGNLCPETVEE IAMVPSIKNRGRALD
Sbjct: 61  YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIKNRGRALD 120

Query: 478 DEAIEKMLNDLSLVKKFE 425
           +EAIEKML DLSL+KKFE
Sbjct: 121 EEAIEKMLTDLSLIKKFE 138


>ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like
           [Cucumis sativus] gi|449526195|ref|XP_004170099.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB4-like [Cucumis sativus]
          Length = 138

 Score =  256 bits (655), Expect = 8e-66
 Identities = 126/138 (91%), Positives = 134/138 (97%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQMSEDP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+VRQVRE+LSRYQLAEFELCVLGNLCPETVEEAIAMVPS+K +GR  D
Sbjct: 61  YVKRFSRYKNPDAVRQVREVLSRYQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRVHD 120

Query: 478 DEAIEKMLNDLSLVKKFE 425
           DEAIEKMLNDLSL+K+FE
Sbjct: 121 DEAIEKMLNDLSLIKRFE 138


>ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 [Medicago truncatula]
           gi|355520929|gb|AET01383.1| DNA-directed RNA polymerase
           II subunit RPB4 [Medicago truncatula]
           gi|388497296|gb|AFK36714.1| unknown [Medicago
           truncatula]
          Length = 138

 Score =  256 bits (655), Expect = 8e-66
 Identities = 128/138 (92%), Positives = 134/138 (97%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ S+D MNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDAMNQVSQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+VRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSIK RGRA D
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQD 120

Query: 478 DEAIEKMLNDLSLVKKFE 425
           DEAIEKMLNDLSL+KKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138


>ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Capsella rubella]
           gi|482557570|gb|EOA21762.1| hypothetical protein
           CARUB_v10002229mg [Capsella rubella]
          Length = 138

 Score =  254 bits (650), Expect = 3e-65
 Identities = 125/138 (90%), Positives = 135/138 (97%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ+SEDPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQVSEDPMNQVSQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+VRQVREILSR+QL EFELCVLGNLCPETVEEA+AMVPS+K +GRA D
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHD 120

Query: 478 DEAIEKMLNDLSLVKKFE 425
           D+AIEKMLNDLSLVK+FE
Sbjct: 121 DDAIEKMLNDLSLVKRFE 138


>ref|NP_196554.1| RNA polymerase II, Rpb4, core protein [Arabidopsis thaliana]
           gi|75098524|sp|O48890.1|NRPB4_ARATH RecName:
           Full=DNA-directed RNA polymerase II subunit 4; AltName:
           Full=15.9 kDa subunit of RNA polymerase II; AltName:
           Full=DNA-directed RNA polymerase II subunit D
           gi|2760362|gb|AAB95261.1| 15.9 kDa subunit of RNA
           polymerase II [Arabidopsis thaliana]
           gi|9758970|dbj|BAB09413.1| 15.9 kDa subunit of RNA
           polymerase II [Arabidopsis thaliana]
           gi|21554212|gb|AAM63291.1| 15.9 kDa subunit of RNA
           polymerase II [Arabidopsis thaliana]
           gi|98960869|gb|ABF58918.1| At5g09920 [Arabidopsis
           thaliana] gi|222423668|dbj|BAH19801.1| AT5G09920
           [Arabidopsis thaliana] gi|332004084|gb|AED91467.1| RNA
           polymerase II, Rpb4, core protein [Arabidopsis thaliana]
          Length = 138

 Score =  254 bits (649), Expect = 4e-65
 Identities = 125/138 (90%), Positives = 135/138 (97%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHK+EQLQQ+SEDPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKFEQLQQISEDPMNQVSQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+VRQVREILSR+QL EFELCVLGNLCPETVEEA+AMVPS+K +GRA D
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHD 120

Query: 478 DEAIEKMLNDLSLVKKFE 425
           DEAIEKMLNDLSLVK+FE
Sbjct: 121 DEAIEKMLNDLSLVKRFE 138


>ref|XP_002871392.1| RPB15.9 [Arabidopsis lyrata subsp. lyrata]
           gi|297317229|gb|EFH47651.1| RPB15.9 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 138

 Score =  254 bits (649), Expect = 4e-65
 Identities = 125/138 (90%), Positives = 135/138 (97%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHK+EQLQQ+SEDPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKFEQLQQVSEDPMNQVSQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+VRQVREILSR+QL EFELCVLGNLCPETVEEA+AMVPS+K +GRA D
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHD 120

Query: 478 DEAIEKMLNDLSLVKKFE 425
           DEAIEKMLNDLSLVK+FE
Sbjct: 121 DEAIEKMLNDLSLVKRFE 138


>ref|NP_001236224.1| uncharacterized protein LOC100527704 [Glycine max]
           gi|255632992|gb|ACU16850.1| unknown [Glycine max]
          Length = 195

 Score =  254 bits (648), Expect = 5e-65
 Identities = 126/135 (93%), Positives = 133/135 (98%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQ S+DPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+VRQVREIL+RY+LAEFELCVLGNLCPETVEEAIAMVPSIK+RGRA D
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYELAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQD 120

Query: 478 DEAIEKMLNDLSLVK 434
           DEAIEKMLNDLSL+K
Sbjct: 121 DEAIEKMLNDLSLIK 135


>gb|EMJ07326.1| hypothetical protein PRUPE_ppa013142mg [Prunus persica]
          Length = 138

 Score =  251 bits (640), Expect = 4e-64
 Identities = 123/138 (89%), Positives = 133/138 (96%)
 Frame = -2

Query: 838 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 659
           MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKY+QLQQMS+DP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYDQLQQMSDDPRNQVSQVFEKSLQ 60

Query: 658 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 479
           YVKRFSRYKNPD+V+QVREILSRYQL EFELCVLGNLCPETVEEAIAMVPSIK +GR  D
Sbjct: 61  YVKRFSRYKNPDAVKQVREILSRYQLTEFELCVLGNLCPETVEEAIAMVPSIKAKGRVHD 120

Query: 478 DEAIEKMLNDLSLVKKFE 425
           D+AI+KMLNDL+L+KKFE
Sbjct: 121 DDAIDKMLNDLALIKKFE 138