BLASTX nr result

ID: Catharanthus23_contig00001542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00001542
         (280 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW05068.1| hypothetical protein PHAVU_011G149400g [Phaseolus...    56   4e-06
emb|CAN71755.1| hypothetical protein VITISV_005047 [Vitis vinifera]    56   4e-06
ref|XP_002264667.2| PREDICTED: uncharacterized protein LOC100240...    55   1e-05

>gb|ESW05068.1| hypothetical protein PHAVU_011G149400g [Phaseolus vulgaris]
          Length = 1285

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
 Frame = -1

Query: 277  IFPCLEIVKVHNMKNLSQVVDGQMLSCSLCKVTEMRVSHCENLLVV----AASDMGSLKT 110
            IFP LE   +  M NL  +  G +   S CK+ +M ++ C NLL V        + SL++
Sbjct: 1019 IFPNLETFVISEMDNLISIWPGLLPQNSFCKLKKMEITSCNNLLNVFPCHVLDKLQSLES 1078

Query: 109  LKVYDCQSLEAVFSFEG-----NQATLGQLDY----LNLKNLPKL 2
            L V++C +LE V+  +G       ++ G LD     L+L NLPKL
Sbjct: 1079 LNVWNCMALEVVYEIDGINTEQEGSSQGGLDIPLRTLSLGNLPKL 1123


>emb|CAN71755.1| hypothetical protein VITISV_005047 [Vitis vinifera]
          Length = 1517

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
 Frame = -1

Query: 280  VIFPCLEIVKVHNMKNLSQVVDGQMLSCSLCKVTEMRVSHCENLLVVAASDM----GSLK 113
            V FP LE + +  + N+ ++   Q+   S  K+  ++V+ C  LL +  S M     SL+
Sbjct: 938  VAFPSLEFLNIVGLDNVKKIWHSQLPQDSFSKLKRVKVATCGELLNIFPSSMLNRLQSLR 997

Query: 112  TLKVYDCQSLEAVFSFEGNQ------ATLGQLDYLNLKNLPKL 2
             LK  DC SLE VF  EG         T+ QL  L L++LPK+
Sbjct: 998  FLKAEDCSSLEEVFDVEGTNVNVKEGVTVTQLSQLILRSLPKV 1040


>ref|XP_002264667.2| PREDICTED: uncharacterized protein LOC100240893 [Vitis vinifera]
          Length = 1970

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
 Frame = -1

Query: 280  VIFPCLEIVKVHNMKNLSQVVDGQMLSCSLCKVTEMRVSHCENLLVVAASDM----GSLK 113
            V FP LE +K+  +  L  +   Q+     CK+  +RV +C  L+ +  S +     +LK
Sbjct: 714  VSFPNLEELKLVGLPKLKMIWHHQLSLEFFCKLRILRVHNCPRLVNLVPSHLIQSFQNLK 773

Query: 112  TLKVYDCQSLEAVFS---FEGNQATLGQLDYLNLKNLPKL 2
             L VYDC++LE+VF    F G+   L +++ L L+ LP+L
Sbjct: 774  ELNVYDCKALESVFDYRGFNGDGGILSKIETLTLEKLPRL 813


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