BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00000971
         (4849 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY25953.1| Uncharacterized protein TCM_027312 [Theobroma cacao]   959   0.0  
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...   956   0.0  
gb|EXB67225.1| hypothetical protein L484_025703 [Morus notabilis]     939   0.0  
ref|XP_003543693.1| PREDICTED: mediator of RNA polymerase II tra...   930   0.0  
gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]                  922   0.0  
gb|EMJ09336.1| hypothetical protein PRUPE_ppa000277mg [Prunus pe...   894   0.0  
ref|XP_003597955.1| hypothetical protein MTR_2g104400 [Medicago ...   855   0.0  
ref|XP_004486632.1| PREDICTED: mediator of RNA polymerase II tra...   837   0.0  
ref|XP_002298206.1| hypothetical protein POPTR_0001s21200g [Popu...   806   0.0  
ref|XP_006465237.1| PREDICTED: mediator of RNA polymerase II tra...   662   0.0  
ref|XP_006427496.1| hypothetical protein CICLE_v10024717mg [Citr...   662   0.0  
ref|XP_006306593.1| hypothetical protein CARUB_v10008096mg [Caps...   652   0.0  
ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264...   643   0.0  
ref|XP_002892882.1| hypothetical protein ARALYDRAFT_471776 [Arab...   639   e-180
ref|XP_006465238.1| PREDICTED: mediator of RNA polymerase II tra...   635   e-179
ref|XP_006427497.1| hypothetical protein CICLE_v10024717mg [Citr...   635   e-179
ref|XP_004974263.1| PREDICTED: mediator of RNA polymerase II tra...   629   e-177
gb|EEC84047.1| hypothetical protein OsI_30310 [Oryza sativa Indi...   624   e-175
ref|XP_004974264.1| PREDICTED: mediator of RNA polymerase II tra...   624   e-175
ref|NP_001062533.1| Os08g0564800 [Oryza sativa Japonica Group] g...   621   e-174

>gb|EOY25953.1| Uncharacterized protein TCM_027312 [Theobroma cacao]
          Length = 1367

 Score =  959 bits (2479), Expect = 0.0
 Identities = 522/839 (62%), Positives = 600/839 (71%), Gaps = 9/839 (1%)
 Frame = -1

Query: 2824 RDMQQRLQTSG----PLLQQQNVIEQQKQLFQSQRAIPEASS---NPTAQTGNASGGDWQ 2666
            RDMQQRLQ SG    PLLQ QN I+QQKQL+QSQRA+PE SS   + TAQTG+A+GGDWQ
Sbjct: 529  RDMQQRLQASGQASSPLLQSQNHIDQQKQLYQSQRAVPETSSTSLDSTAQTGHANGGDWQ 588

Query: 2665 EEVYQKIKSMKEMYYVELNEMYVKIATKLQQHESLSQQTKNEQHEKIKLFKAMLERLVQF 2486
            EEVYQKIK+MKE Y  ELNEMY KIA KLQQH+SL QQ K++Q EK+KLFK MLER++ F
Sbjct: 589  EEVYQKIKTMKETYLPELNEMYQKIAAKLQQHDSLPQQPKSDQLEKLKLFKTMLERIITF 648

Query: 2485 LRMNKNDVQLAHKEKLGSVEKQIINILNSHRPRKXXXXXXXXXXXXXXXXXXXPAQ--IS 2312
            L ++K ++    K+KL S EKQIIN +N++RPRK                     Q  I+
Sbjct: 649  LSVSKANILPTFKDKLTSYEKQIINFINTNRPRKPASTLQQGQLPPPHMHSMQQPQPQIN 708

Query: 2311 QMQPHENQMNPQMQSMNVPSSVATIQQNSMSGLQQNSLSSVPAVSNAQQNMINAIQPASN 2132
            Q Q H+NQMNPQ+QS+N+  SV T+Q N+M+ LQ NSLSS+P VS AQQ M+N++QP SN
Sbjct: 709  QTQSHDNQMNPQLQSINIQGSVPTMQTNNMTSLQHNSLSSLPGVSTAQQTMLNSLQPGSN 768

Query: 2131 PDGGQSTALSSLQQVAMNSLQQNPVSGPQSVNISSLTSQSGMNTLQSNLNSLQTNSTMLQ 1952
             D GQ  AL S+QQVA   LQQNPVS  Q  NISSL+SQSG++ LQ N+N LQ+NS MLQ
Sbjct: 769  LDSGQGNALGSMQQVAPGPLQQNPVSTSQQANISSLSSQSGISVLQQNMNPLQSNSNMLQ 828

Query: 1951 NQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 1772
            +QH                                                         
Sbjct: 829  HQHLNKPEQQMLQSQQLKQQYQQRQMQQQQYIQKQQLMQQQQQQQQQQQQQLHQQAKQQL 888

Query: 1771 PAQLPGHHMSPLHQMTDSSDMKMRQQMGVKSGVFQQQHSTGQRAAYHHQQLKSGSPFSIS 1592
            P QL  H +  LHQM D +DMKMRQ MGVK GVFQQ    GQR +Y HQQLK GS F IS
Sbjct: 889  PTQLQTHQIPQLHQMNDVNDMKMRQGMGVKPGVFQQHLPAGQRQSYTHQQLKPGSQFPIS 948

Query: 1591 SPQVLQAASPQVPQHPSPQIDQQNLLSSMTKAGTPLQSANSPFIMPSPSTPLAPSPMPGE 1412
            SPQ+LQAASPQ+PQH SPQ+DQQ+LL+S++K GTPLQSANSPF++PSPSTPLAPSPM GE
Sbjct: 949  SPQLLQAASPQMPQHSSPQVDQQSLLTSISKTGTPLQSANSPFVVPSPSTPLAPSPMLGE 1008

Query: 1411 SEKVNSSISSLPNAGNIGGPQTAAVSGPAQSLAIGTPGISASPLLAEFTNLDAAHGTVSS 1232
            SEK     SSL NA N+G  Q   V   +QSLAIGTPGISASPLLAEFT  D  H T  +
Sbjct: 1009 SEKPVPGTSSLSNAANVGHQQGTGVQPGSQSLAIGTPGISASPLLAEFTGADGTHPTALT 1068

Query: 1231 VISNKSNAVEQPFERLIKAVKSVSREALTAXXXXXXXXXXXXDRIAGSAPGNGSRAAVGE 1052
             +S++SN  EQP ERL+KAVKS+S  AL A            DRIAGSAPGNGSRAAVGE
Sbjct: 1069 TVSSRSNITEQPLERLMKAVKSMSPTALGASVSDIGSVVSMTDRIAGSAPGNGSRAAVGE 1128

Query: 1051 DLVAMTKCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVSSAGSISESARLLNGSDASEM 872
            DLVAMTKCRLQARNF TQDG  GTK+MRR TSAMP NVVSSAGS+++S + L GS+ S++
Sbjct: 1129 DLVAMTKCRLQARNFITQDGMNGTKRMRRYTSAMPLNVVSSAGSVNDSFKQLTGSETSDL 1188

Query: 871  ESTATSSIKRPRIETSHALSEEIHEINRLLIDTVVDICXXXXXXXXXXXXXXXXXXTIVK 692
            ESTATSS+KRPRIE +HAL EEI EIN  LIDTVVDI                   TIVK
Sbjct: 1189 ESTATSSVKRPRIEANHALLEEIREINLRLIDTVVDISDEDVDPSAAAATAEGGEGTIVK 1248

Query: 691  CSFNAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIK 512
            CSF+AVALS NLKSQY SAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLS+K
Sbjct: 1249 CSFSAVALSSNLKSQYMSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSVK 1308

Query: 511  AKSRFSISLRGLSQPMSLEEMAKTWDMCARAVISEYAQQSGGGTFSSKYGTWENCLSAS 335
            AKSRFSISLR LSQPMSL E+A+TWD+CARAVISE+AQQSGGG+FSSKYGTWENCLSA+
Sbjct: 1309 AKSRFSISLRTLSQPMSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYGTWENCLSAA 1367



 Score =  272 bits (695), Expect = 1e-69
 Identities = 164/297 (55%), Positives = 190/297 (63%), Gaps = 8/297 (2%)
 Frame = -1

Query: 4366 MDNVDWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQQ 4187
            MD  DWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGL EL+KIAVRFEEKI+TAA+SQ 
Sbjct: 17   MDTGDWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLNELRKIAVRFEEKIFTAASSQS 76

Query: 4186 DYLRKISLKMLTMETKSQNPMANSNATKNPPDAVSHGMQSQMHNQPLSMPV--VSNQSQA 4013
            DYLR+ISLKMLTMETKSQN + N+     PPD  S  MQ+Q+H Q  S+P+   SNQSQA
Sbjct: 77   DYLRRISLKMLTMETKSQNSIPNTGNNGKPPDPGSQAMQNQVHGQGQSIPIPLQSNQSQA 136

Query: 4012 RQQLLPQNMQNSISSAGVQNSASLTSTLPAVGNLTQASMPNVVGQNNLQNMQNISNVAQN 3833
            RQQLLPQN+ N+++SAGVQ+SA L S +P V  LTQ  +PNVVGQN+  NMQN+S + Q 
Sbjct: 137  RQQLLPQNVPNNMASAGVQSSAGLQSGMPPVSGLTQNPIPNVVGQNS--NMQNMSGITQ- 193

Query: 3832 PVGNSMGQGMPPNVFANSQRQMAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 3653
               NS+GQGMP N+FAN QRQM GR                                   
Sbjct: 194  ---NSLGQGMPSNIFANQQRQMQGR-------QQVHPQQQQQLYHHQLQHQLMRQKIQPG 243

Query: 3652 XXXXXLMQSHMXXXXXXXXXXXXXXXXXXQNLLQPAQIQTSQQ------AVMQPSVM 3500
                 LMQSHM                  QNLL P Q+Q+SQQ      +VMQP+VM
Sbjct: 244  NLQPSLMQSHM-------------QQQQQQNLLPPTQLQSSQQSGMQTSSVMQPTVM 287


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
            gi|223530005|gb|EEF31930.1| transcription cofactor,
            putative [Ricinus communis]
          Length = 1382

 Score =  956 bits (2470), Expect = 0.0
 Identities = 551/1002 (54%), Positives = 643/1002 (64%), Gaps = 28/1002 (2%)
 Frame = -1

Query: 3256 NATNIQQNQLIGQPNSIPDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN---------- 3107
            NATN+QQNQLIGQ N++ DM                                        
Sbjct: 385  NATNMQQNQLIGQQNNVGDMQQQQQRLLGQQNNIQNLQQQHQQHQQQQQQQLMAQQNNLS 444

Query: 3106 -MHQTQLGAQNSVSGLQQSQ--MLGTQSGNSGMPVNQHSVHMLXXXXXXXXXXQHXXXXX 2936
             MHQ QLG+Q++VSGLQQ Q  +LGTQ GNSGM  NQ S+HML           H     
Sbjct: 445  SMHQQQLGSQSNVSGLQQQQQHLLGTQPGNSGMQTNQQSMHMLQRPKVPLQQQTHQSASN 504

Query: 2935 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ--------RDMQQRLQTSGP--- 2789
                                                         RDMQ  LQ S     
Sbjct: 505  LLPTQGQQPQPQPQLPQQQLPSQIQSQPTQLQQQLALQQQSNTLQRDMQAGLQASSQAPS 564

Query: 2788 -LLQQQNVIEQQKQLFQSQRAIPEASS---NPTAQTGNASGGDWQEEVYQKIKSMKEMYY 2621
             L QQQNVI+QQKQL+QSQR +PE SS   + TAQTG+A+  D QEEVYQKIK+MKEMY+
Sbjct: 565  SLTQQQNVIDQQKQLYQSQRPLPETSSTSLDSTAQTGHANAVDVQEEVYQKIKAMKEMYF 624

Query: 2620 VELNEMYVKIATKLQQHESLSQQTKNEQHEKIKLFKAMLERLVQFLRMNKNDVQLAHKEK 2441
             ELNEMY KIATKLQQH+SL Q  K EQ EK++LFK+MLER++ FL++ K+ V  + +EK
Sbjct: 625  PELNEMYHKIATKLQQHDSLPQPPKTEQLEKLRLFKSMLERIITFLQVPKSSVMPSFREK 684

Query: 2440 LGSVEKQIINILNSHRPRKXXXXXXXXXXXXXXXXXXXPAQISQMQPHENQMNPQMQSMN 2261
            LGS EKQIIN +N++RP++                    +Q+ Q+Q HE+QMNPQMQSMN
Sbjct: 685  LGSYEKQIINFINTNRPKRQITSMQQGQLSQPQIQQPQ-SQVPQVQSHESQMNPQMQSMN 743

Query: 2260 VPSSVATIQQNSMSGLQQNSLSSVPAVSNAQQNMINAIQPASNPDGGQSTALSSLQQVAM 2081
            +  SV T+QQN+MS LQQ  L S+  VS++QQ+M++++Q ASN D  Q   +SSLQQ  +
Sbjct: 744  MQGSVQTMQQNNMSSLQQTPLPSLSGVSSSQQSMMSSMQSASNLDSVQGNVMSSLQQGGL 803

Query: 2080 NSLQQNPVSGPQSVNISSLTSQSGMNTLQSNLNSLQTNSTMLQNQHXXXXXXXXXXXXXX 1901
             S QQNPVS  Q  NI +L+SQSG+N LQ N+ SLQ+NS MLQ  H              
Sbjct: 804  GSHQQNPVSSAQQANIPNLSSQSGVNMLQPNI-SLQSNSNMLQ--HQHLKQHQEQQMLKQ 860

Query: 1900 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAQLPGHHMSPLHQMTD 1721
                                                       PAQ+  H M  +HQM D
Sbjct: 861  QFQHRHMQQHLIQKQQILQQQQQQQQQQQQQQQQLHQQSKQQLPAQMQAHQMPQVHQMND 920

Query: 1720 SSDMKMRQQMGVKSGVFQQQHSTGQRAAYHHQQLKSGSPFSISSPQVLQAASPQVPQHPS 1541
             +D+K+R  MGVK GVFQQ  S GQR  Y HQQ+K G+ F ISSPQ+LQAASPQ+ QH S
Sbjct: 921  VNDLKIRPGMGVKPGVFQQHLSAGQRTTYPHQQMKPGASFPISSPQLLQAASPQLTQHSS 980

Query: 1540 PQIDQQNLLSSMTKAGTPLQSANSPFIMPSPSTPLAPSPMPGESEKVNSSISSLPNAGNI 1361
            PQIDQQNLLSS+TK GTPLQSANSPF++ SPSTPLAPSPMPG+SEK  + ISSL NAGNI
Sbjct: 981  PQIDQQNLLSSLTKTGTPLQSANSPFVVQSPSTPLAPSPMPGDSEKPITGISSLSNAGNI 1040

Query: 1360 GGPQTAAVSGPAQSLAIGTPGISASPLLAEFTNLDAAHGTVSSVISNKSNAVEQPFERLI 1181
            G  Q      P  SLAIGTPGISASPLLAEFT  D       +  S KS   EQP ERLI
Sbjct: 1041 GQQQATVAQAPVPSLAIGTPGISASPLLAEFTGSDVGLANTLTTASGKSTVTEQPLERLI 1100

Query: 1180 KAVKSVSREALTAXXXXXXXXXXXXDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFFT 1001
            KAVKS+S +AL+A            DRIA SAPGNGSRAAVGEDLVAMT CRLQARNF T
Sbjct: 1101 KAVKSMSPKALSASVSDIGSVVSMIDRIASSAPGNGSRAAVGEDLVAMTNCRLQARNFIT 1160

Query: 1000 QDGPTGTKKMRRSTSAMPSNVVSSAGSISESARLLNGSDASEMESTATSSIKRPRIETSH 821
            QDG +GT+KMRR TSAMP NVVSSA SIS+S +  NG++ SE+ESTATSS+KRPR+E +H
Sbjct: 1161 QDGMSGTRKMRRYTSAMPLNVVSSASSISDSFKQFNGAETSELESTATSSVKRPRLEANH 1220

Query: 820  ALSEEIHEINRLLIDTVVDICXXXXXXXXXXXXXXXXXXTIVKCSFNAVALSPNLKSQYA 641
            AL EEI EIN+ LIDTVVDI                   TIVKCSF+AVALSPNLKSQYA
Sbjct: 1221 ALLEEIREINQRLIDTVVDISEEDVDPTAGAATAGGGEGTIVKCSFSAVALSPNLKSQYA 1280

Query: 640  SAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIKAKSRFSISLRGLSQPMS 461
            SAQMSPIQPLRLLVPTNYPNCSPILLDK PVEVSKEYEDLS+KAKSRF+ISLR LSQPMS
Sbjct: 1281 SAQMSPIQPLRLLVPTNYPNCSPILLDKLPVEVSKEYEDLSVKAKSRFNISLRSLSQPMS 1340

Query: 460  LEEMAKTWDMCARAVISEYAQQSGGGTFSSKYGTWENCLSAS 335
            L E+A+TWD+CARAVISE+AQQSGGG+FSSKYGTWENCLSA+
Sbjct: 1341 LGEIARTWDVCARAVISEHAQQSGGGSFSSKYGTWENCLSAA 1382



 Score =  264 bits (675), Expect = 3e-67
 Identities = 141/209 (67%), Positives = 162/209 (77%), Gaps = 9/209 (4%)
 Frame = -1

Query: 4366 MDNVDWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQQ 4187
            +D  DWR  LQ DSRQRIVNKIM+TLKRHLPFSGQEGL+ELKKIAVRFEEKIYTAATSQ 
Sbjct: 17   VDTGDWRATLQPDSRQRIVNKIMETLKRHLPFSGQEGLEELKKIAVRFEEKIYTAATSQS 76

Query: 4186 DYLRKISLKMLTMETKSQNPMANS-------NATKNPPDAVSHGMQSQMHNQPLSMPV-- 4034
            DYLRKISLKMLTME+KSQN + NS       N  + P    S  MQ Q+HNQ  S+PV  
Sbjct: 77   DYLRKISLKMLTMESKSQNNVPNSVPPNPFGNNNRPPDPGASQSMQPQVHNQGQSLPVPL 136

Query: 4033 VSNQSQARQQLLPQNMQNSISSAGVQNSASLTSTLPAVGNLTQASMPNVVGQNNLQNMQN 3854
             +NQ+Q RQQLL QN+QN+++S G+Q+SA LTS LP V  L Q S+PNVVGQN+  NMQN
Sbjct: 137  SANQTQTRQQLLSQNIQNNMASTGIQSSAGLTSALPPVSGLAQTSIPNVVGQNS--NMQN 194

Query: 3853 ISNVAQNPVGNSMGQGMPPNVFANSQRQM 3767
            IS V QN  GNS+GQG+P N+FANSQRQM
Sbjct: 195  ISGVPQNSAGNSLGQGVPSNMFANSQRQM 223


>gb|EXB67225.1| hypothetical protein L484_025703 [Morus notabilis]
          Length = 1396

 Score =  939 bits (2428), Expect = 0.0
 Identities = 548/1028 (53%), Positives = 650/1028 (63%), Gaps = 53/1028 (5%)
 Frame = -1

Query: 3259 PNATNIQQNQLIGQPNSIPDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN------MHQ 3098
            PN+T++QQ  LIGQ N+I D+                                    +HQ
Sbjct: 372  PNSTSMQQTHLIGQQNNIGDIQQQQQQRLLVQQNNLSNLQQQQQQQQLMAQQNNLSNLHQ 431

Query: 3097 TQLGAQNSVSGLQ-QSQMLGTQSGNSGMPVNQHSVHMLXXXXXXXXXXQHXXXXXXXXXX 2921
             QLG+Q +V+GL  Q Q+LGTQ+GNS M  NQHS+HML                      
Sbjct: 432  QQLGSQGNVTGLHHQQQLLGTQTGNSSMQTNQHSLHMLQQSKPSLQQQPQQSASNLLPTQ 491

Query: 2920 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRDMQ----QRL----QTSGPLLQQQNVI 2765
                                              +Q    QRL    QTSG LLQ QNVI
Sbjct: 492  AQQSQPQPPQQQMLSQIQSQPTQIQPPLSMQPNPLQRDMPQRLQASGQTSGSLLQTQNVI 551

Query: 2764 EQQK-QLFQSQRAIPEASS---NPTAQTGNASGGDWQEEVYQKIKSMKEMYYVELNEMYV 2597
            +QQK QL+QSQRA PE SS   + TAQTG+A+  D  +EVYQKIK+MKE Y  ELNEMY 
Sbjct: 552  DQQKQQLYQSQRAPPETSSTSLDSTAQTGHANVSD--DEVYQKIKAMKEQYLPELNEMYQ 609

Query: 2596 KIATKLQQ--------------------------HESLSQQTKNEQHEKIKLFKAMLERL 2495
            KIA KLQQ                           +SL QQ K++Q+EKIKLFK MLER 
Sbjct: 610  KIAAKLQQACPFFYLLQFIYTNKFASIFGNFRLIQDSLPQQPKSDQYEKIKLFKTMLERA 669

Query: 2494 VQFLRMNKNDVQLAHKEKLGSVEKQIINILNSHRPRK--XXXXXXXXXXXXXXXXXXXPA 2321
            + FL++ K  +   +K+KL   EKQI+N +N+HRPRK                      +
Sbjct: 670  ITFLQVPKGSILPGYKDKLAHYEKQIVNFINTHRPRKPVSQLQQGQVSSTHMHTMQQPQS 729

Query: 2320 QISQMQPHENQMNPQMQSMNVPSSVATIQQNSMSGLQQNSLSSVPAVSNAQQNMINAIQP 2141
            QI+Q+  HENQMNPQ+QSMN   SVAT+QQN+M+ LQQ+S+S++  VS  QQN++N++QP
Sbjct: 730  QIAQVHSHENQMNPQLQSMNAQGSVATMQQNNMTSLQQSSISTLSGVSTPQQNVMNSLQP 789

Query: 2140 ASNPDGGQSTALSSLQQVAMNSLQQNPVSGPQSVNISSLTSQSGMNTLQSNLNSLQTNST 1961
             SN D GQ  +L+SLQQV++ S+QQNPVS P   NI++L+SQ+GMN LQS++N+LQ NS 
Sbjct: 790  NSNMDSGQGNSLNSLQQVSVGSMQQNPVSAPPQGNINALSSQNGMNVLQSSINTLQPNSG 849

Query: 1960 MLQNQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1781
            MLQ+QH                                                      
Sbjct: 850  MLQHQHIKQQQEQQMLQTQQLKQQLHQRQIQQQLLQKQQILQQQQQQQQQQQQQQQQQLQ 909

Query: 1780 XXQPAQLPG------HHMSPLHQMTDSSDMKMRQQMGVKSGVFQQQHSTGQRAAYHHQQL 1619
                 QLP       + +S LHQM D +DMKMRQ M VK GVFQQ    GQR+AY HQQL
Sbjct: 910  QQPKQQLPAQLQTHQNQISQLHQMNDVNDMKMRQNMAVKPGVFQQHVPAGQRSAYPHQQL 969

Query: 1618 KSGSPFSISSPQVLQAASPQVPQHPSPQIDQQNLLSSMTKAGTPLQSANSPFIMPSPSTP 1439
            K+GSPFS+ S   LQA+SPQV QH SPQ+DQQNLLSS+TKAGTPLQSANSPF++PSPSTP
Sbjct: 970  KTGSPFSVPSNH-LQASSPQVLQHSSPQVDQQNLLSSLTKAGTPLQSANSPFVVPSPSTP 1028

Query: 1438 LAPSPMPGESEKVNSSISSLPNAGNIGGPQTAAVSGPAQSLAIGTPGISASPLLAEFTNL 1259
            LAPSPMPG+S+K    ISSLPNAGN+G  Q +    PA SLAIGTPGISASPLLAEF++ 
Sbjct: 1029 LAPSPMPGDSDKPVPGISSLPNAGNVGQQQASGGVAPAPSLAIGTPGISASPLLAEFSSP 1088

Query: 1258 DAAHGTVSSVISNKSNAVEQPFERLIKAVKSVSREALTAXXXXXXXXXXXXDRIAGSAPG 1079
            D  HG V S +S KS+  EQP  RLIKAVKS+S  AL+A            DRIAGSAPG
Sbjct: 1089 DGIHGNVLSSVSGKSSVTEQPLGRLIKAVKSMSPTALSASVSDIGSVVSMIDRIAGSAPG 1148

Query: 1078 NGSRAAVGEDLVAMTKCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVSSAGSISESARL 899
            NGSRAAVGEDLVAMTKCRLQ RNF TQDG  GT+KM+R TSAMP NVVSSA SI++S + 
Sbjct: 1149 NGSRAAVGEDLVAMTKCRLQVRNFITQDGTNGTRKMKRYTSAMPLNVVSSASSINDSFKQ 1208

Query: 898  LNGSDASEMESTATSSIKRPRIETSHALSEEIHEINRLLIDTVVDICXXXXXXXXXXXXX 719
             NGS+ SE+ESTATS IKRP+IE +HAL EEI EIN+ LIDTVVDI              
Sbjct: 1209 FNGSETSELESTATSGIKRPKIEANHALLEEIREINQRLIDTVVDISDEDVDPSAAAAAV 1268

Query: 718  XXXXXTIVKCSFNAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVS 539
                 TIVKCSF+AVALSPNLKSQYASA+MSPIQPLRLLVPTNYPNCSPILLDKFPVE+S
Sbjct: 1269 EGGEGTIVKCSFSAVALSPNLKSQYASARMSPIQPLRLLVPTNYPNCSPILLDKFPVEIS 1328

Query: 538  KEYEDLSIKAKSRFSISLRGLSQPMSLEEMAKTWDMCARAVISEYAQQSGGGTFSSKYGT 359
            KEYEDLS+KAKS+FS  LR LSQPMSL  +A+TWD+CARAVISE+AQQSGGG+FSSKYGT
Sbjct: 1329 KEYEDLSVKAKSKFSTFLRSLSQPMSLGAIARTWDVCARAVISEHAQQSGGGSFSSKYGT 1388

Query: 358  WENCLSAS 335
            WENCLSAS
Sbjct: 1389 WENCLSAS 1396



 Score =  269 bits (688), Expect = 8e-69
 Identities = 163/295 (55%), Positives = 188/295 (63%), Gaps = 8/295 (2%)
 Frame = -1

Query: 4366 MDNVDWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQQ 4187
            MD VDWRTQLQ DSRQRIVNKIMDTLK+HLPFSGQEGL ELKKIA RFEEKIYTAATSQ 
Sbjct: 16   MDAVDWRTQLQPDSRQRIVNKIMDTLKKHLPFSGQEGLHELKKIAERFEEKIYTAATSQS 75

Query: 4186 DYLRKISLKMLTMETKSQNPMANSNAT------KNPPDAVSHGMQSQMHN--QPLSMPVV 4031
            DYLRKISLKMLTMETKSQN + NS  T        PPD  S GMQSQ+HN  Q L+MP+ 
Sbjct: 76   DYLRKISLKMLTMETKSQNSIPNSLPTNPVSNNNRPPDPGSLGMQSQIHNQGQSLAMPLQ 135

Query: 4030 SNQSQARQQLLPQNMQNSISSAGVQNSASLTSTLPAVGNLTQASMPNVVGQNNLQNMQNI 3851
             NQSQ R QLLPQN+QN   S GVQ+S++L+  LP   +L+Q S+P+VVGQN   NMQN+
Sbjct: 136  PNQSQTRPQLLPQNIQN---SGGVQSSSTLSPALPPPSSLSQTSIPSVVGQN--PNMQNM 190

Query: 3850 SNVAQNPVGNSMGQGMPPNVFANSQRQMAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 3671
               +QN VGNSMGQG+P N++A+SQRQ+ GR                             
Sbjct: 191  PGTSQNTVGNSMGQGVPANMYASSQRQVHGR--PQVVPQQQQQSQNAQQYNMYQQQQLLK 248

Query: 3670 XXXXXXXXXXXLMQSHMXXXXXXXXXXXXXXXXXXQNLLQPAQIQTSQQAVMQPS 3506
                       +MQSHM                   NLLQP Q+Q+SQQAV+Q S
Sbjct: 249  PKFQQGNIPQPMMQSHM-------------QQQQQPNLLQPTQLQSSQQAVIQTS 290


>ref|XP_003543693.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like [Glycine max]
          Length = 1324

 Score =  930 bits (2403), Expect = 0.0
 Identities = 495/831 (59%), Positives = 601/831 (72%), Gaps = 3/831 (0%)
 Frame = -1

Query: 2824 RDMQQRLQTSGPLLQQQNVIEQQKQLFQSQRAIPEASS---NPTAQTGNASGGDWQEEVY 2654
            RD+QQRLQ SGPLLQQ NV++QQKQL+QSQR +PE SS   + TAQTG +SGGDWQEEVY
Sbjct: 500  RDVQQRLQASGPLLQQSNVLDQQKQLYQSQRPLPETSSTSLDSTAQTGQSSGGDWQEEVY 559

Query: 2653 QKIKSMKEMYYVELNEMYVKIATKLQQHESLSQQTKNEQHEKIKLFKAMLERLVQFLRMN 2474
            QKIKSMKE Y  ELNEMY KI +KLQQH+SL QQ K++Q EK+K+FK MLER++ FL+++
Sbjct: 560  QKIKSMKESYLPELNEMYQKIVSKLQQHDSLPQQPKSDQLEKLKVFKMMLERIITFLQVS 619

Query: 2473 KNDVQLAHKEKLGSVEKQIINILNSHRPRKXXXXXXXXXXXXXXXXXXXPAQISQMQPHE 2294
            K+++    KEKL S EKQIIN +N++RPRK                     Q++Q+Q HE
Sbjct: 620  KSNISPNFKEKLNSYEKQIINFINTNRPRKNMPGHLLPPHMHSMPQSQP--QVTQVQSHE 677

Query: 2293 NQMNPQMQSMNVPSSVATIQQNSMSGLQQNSLSSVPAVSNAQQNMINAIQPASNPDGGQS 2114
            NQMNPQ+Q+ N+  SVAT+QQN+M+G+Q NSLS V   S  QQ+ +N++QP++N D G  
Sbjct: 678  NQMNPQLQTTNMQGSVATMQQNNMAGMQHNSLSGV---STVQQSKMNSMQPSTNLDSGPG 734

Query: 2113 TALSSLQQVAMNSLQQNPVSGPQSVNISSLTSQSGMNTLQSNLNSLQTNSTMLQNQHXXX 1934
             A++SLQQV ++SLQQNPVS PQ  N++SL+SQ+G+N +Q NLN LQ  S+MLQ+Q    
Sbjct: 735  NAVNSLQQVPVSSLQQNPVSAPQQTNVNSLSSQAGVNVVQPNLNPLQPGSSMLQHQQLKQ 794

Query: 1933 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAQLPG 1754
                                                                  PAQLP 
Sbjct: 795  QQEQQMLQNQQLKQQYQRQLLQRKQQQMLQQQQQQQQQQQQQQQQLHQTSKQQLPAQLPT 854

Query: 1753 HHMSPLHQMTDSSDMKMRQQMGVKSGVFQQQHSTGQRAAYHHQQLKSGSPFSISSPQVLQ 1574
            H +  LHQM D++D+KMRQ +GVK GVFQQ  ++ QR+AY HQQ+K GSPF +SSPQ+LQ
Sbjct: 855  HQIQQLHQMNDANDIKMRQGIGVKPGVFQQHLTSSQRSAYPHQQMK-GSPFPVSSPQLLQ 913

Query: 1573 AASPQVPQHPSPQIDQQNLLSSMTKAGTPLQSANSPFIMPSPSTPLAPSPMPGESEKVNS 1394
            A SPQ+PQH SPQ+DQQN L S+TK  TPLQSANSPF++P+PS PLAPSPMPG+SEK+ S
Sbjct: 914  ATSPQIPQHSSPQVDQQNHLPSLTKVATPLQSANSPFVVPTPSPPLAPSPMPGDSEKLIS 973

Query: 1393 SISSLPNAGNIGGPQTAAVSGPAQSLAIGTPGISASPLLAEFTNLDAAHGTVSSVISNKS 1214
             +SS+ NA NIG  QT   + P QSLAIGTPGISASPLLAEFT  D AHG   +  S KS
Sbjct: 974  GVSSISNAANIGYQQTGGAAAPGQSLAIGTPGISASPLLAEFTGPDGAHGNSLAPTSGKS 1033

Query: 1213 NAVEQPFERLIKAVKSVSREALTAXXXXXXXXXXXXDRIAGSAPGNGSRAAVGEDLVAMT 1034
               EQP ERLIKAVKS+S +AL++            DRIAGSAPGNGSRAAVGEDLVAMT
Sbjct: 1034 TVTEQPIERLIKAVKSMSPKALSSAVSDIGSVVSMNDRIAGSAPGNGSRAAVGEDLVAMT 1093

Query: 1033 KCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVSSAGSISESARLLNGSDASEMESTATS 854
             CRLQARNF TQDG  GT++M+R T+A P NVV+SAGS+++S + L  ++AS+++STATS
Sbjct: 1094 NCRLQARNFITQDGANGTRRMKRYTNATPLNVVTSAGSMNDSIKQL-AAEASDLDSTATS 1152

Query: 853  SIKRPRIETSHALSEEIHEINRLLIDTVVDICXXXXXXXXXXXXXXXXXXTIVKCSFNAV 674
              K PRIE +H+L EEI E+N+ LIDTVVDI                   TIVKCS+NAV
Sbjct: 1153 RFKMPRIEANHSLLEEIREVNQRLIDTVVDISNEEVDPTAAAAAAEGTEGTIVKCSYNAV 1212

Query: 673  ALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIKAKSRFS 494
            ALSP+LKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVE SKE EDLS+KAKSRFS
Sbjct: 1213 ALSPSLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVESSKENEDLSVKAKSRFS 1272

Query: 493  ISLRGLSQPMSLEEMAKTWDMCARAVISEYAQQSGGGTFSSKYGTWENCLS 341
            ISLR LSQPMSL E+A+TWD+CAR VISE+AQQSGGG+FSSKYGTWENCL+
Sbjct: 1273 ISLRSLSQPMSLGEIARTWDVCARTVISEHAQQSGGGSFSSKYGTWENCLT 1323



 Score =  184 bits (468), Expect = 3e-43
 Identities = 116/210 (55%), Positives = 133/210 (63%), Gaps = 7/210 (3%)
 Frame = -1

Query: 4366 MDNVDWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQQ 4187
            MD  DWR  L  +SRQRIVNKIMDTLKRHLP +GQEGL EL+KIA RFEEKI+TAATSQ 
Sbjct: 16   MDTSDWRGGLHHESRQRIVNKIMDTLKRHLPVTGQEGLHELQKIAQRFEEKIFTAATSQS 75

Query: 4186 DYLRKISLKMLTMETKSQNPMA-----NSNATKNPPDAVSHGMQSQMHNQPLSMPV-VSN 4025
            DYLRKISLKMLTMETKSQ  MA     N     N P     G+  Q+HN     P+ + N
Sbjct: 76   DYLRKISLKMLTMETKSQGSMAPNLPTNQGGPSNKPPDPGLGIPPQVHNPGQQHPIPMPN 135

Query: 4024 QSQARQQLLPQNMQNSISSAGVQNSASLTSTLPAVGNLTQASMPNVVGQNNLQNMQNISN 3845
            Q   RQQLLPQN+QNSI+S                 N+ QA + N VGQNN  NMQNI  
Sbjct: 136  QPPNRQQLLPQNIQNSIAS--------------QPSNIAQAPIQN-VGQNN-PNMQNIP- 178

Query: 3844 VAQNPVGNSMGQGM-PPNVFANSQRQMAGR 3758
              QN VG+++ Q     N+F  SQRQ+ GR
Sbjct: 179  -GQNSVGSTISQNSNMQNMFPGSQRQIQGR 207


>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
          Length = 1405

 Score =  922 bits (2383), Expect = 0.0
 Identities = 505/849 (59%), Positives = 599/849 (70%), Gaps = 19/849 (2%)
 Frame = -1

Query: 2824 RDMQQRLQTSGP----LLQQQNVIEQQKQLFQSQRAIPEASS---NPTAQTGNASGGDWQ 2666
            RDMQQRLQ SG     LLQ QNV++QQKQL+Q QRA+PE SS   + T QTG A+G DWQ
Sbjct: 557  RDMQQRLQASGQASASLLQPQNVMDQQKQLYQPQRALPETSSTSLDSTHQTGQANGVDWQ 616

Query: 2665 EEVYQKIKSMKEMYYVELNEMYVKIATKLQQHESLSQQTKNEQHEKIKLFKAMLERLVQF 2486
            EEVYQKIKSMKEMY  ELNEMY KIA KLQQH+SL QQ K++Q EK+K+FK MLER++ F
Sbjct: 617  EEVYQKIKSMKEMYLPELNEMYQKIAAKLQQHDSLPQQPKSDQLEKLKIFKTMLERIISF 676

Query: 2485 LRMNKNDVQLAHKEKLGSVEKQIINILNSHRPRKXXXXXXXXXXXXXXXXXXXP---AQI 2315
            L+++K+++  + KEKLGS EKQI+N ++++RPRK                       +QI
Sbjct: 677  LQVSKSNILPSFKEKLGSYEKQIVNFISTNRPRKPVSSMQQQGQLPPTHMHSMQQQQSQI 736

Query: 2314 SQMQPHENQMNPQMQSMNVPSSVATIQQNSMSGLQQNSLSSVPAVSNAQQNMINAIQPAS 2135
            SQ QPH+NQMN Q+QSMN+  S+ T+Q N+++ +Q NS+ SV  VS +QQNM+N++ P  
Sbjct: 737  SQGQPHDNQMNSQIQSMNLAGSMVTMQPNNVTNVQHNSVPSVSGVSTSQQNMLNSVLPGP 796

Query: 2134 NPDGGQSTALSSLQQVAMNSLQQNPVSGPQSVNISSLTSQ-------SGMNTLQ--SNLN 1982
            N D GQ T+LSS+ QV   SLQQN VS PQ  +I++L SQ       S +N LQ  SN+ 
Sbjct: 797  NMDSGQGTSLSSMHQVNAGSLQQNSVSAPQQASINNLASQSGVNMLQSNINPLQSNSNMM 856

Query: 1981 SLQTNSTMLQNQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1802
              Q      + Q                                                
Sbjct: 857  QHQHLKQHQEQQILQSQQLKQMQQQRQMQFQKQQLMQQQQQQQHQQQQHQQQQHQQQQHQ 916

Query: 1801 XXXXXXXXXQPAQLPGHHMSPLHQMTDSSDMKMRQQMGVKSGVFQQQHSTGQRAAYHHQQ 1622
                      PAQLP H M  L+QM D +D+K+RQ M VK GVFQQ  ++GQR+AY HQ 
Sbjct: 917  QQHQQAKQQLPAQLPTHQMPQLNQMNDVNDLKIRQGMAVKPGVFQQHLTSGQRSAYSHQP 976

Query: 1621 LKSGSPFSISSPQVLQAASPQVPQHPSPQIDQQNLLSSMTKAGTPLQSANSPFIMPSPST 1442
            LK G+ F ISSPQ+LQ ASPQ+PQH SPQ+DQQNLL S+TK+GTPLQS NSPF++PSPST
Sbjct: 977  LKPGAQFPISSPQLLQTASPQIPQHSSPQVDQQNLLQSITKSGTPLQSVNSPFVVPSPST 1036

Query: 1441 PLAPSPMPGESEKVNSSISSLPNAGNIGGPQTAAVSGPAQSLAIGTPGISASPLLAEFTN 1262
            P+APSPMPG+SEK  S ISSL NAGNIG  QT +    A SLAIGTPGISASPLLAEFT 
Sbjct: 1037 PMAPSPMPGDSEKPISGISSLSNAGNIGHQQTTSAQAAAPSLAIGTPGISASPLLAEFTG 1096

Query: 1261 LDAAHGTVSSVISNKSNAVEQPFERLIKAVKSVSREALTAXXXXXXXXXXXXDRIAGSAP 1082
             D AHG   + IS K++  EQP ERLIKAVKS+S +AL+A            DRIAGSAP
Sbjct: 1097 PDGAHGNALTAISIKASVTEQPLERLIKAVKSMSPKALSASVSDIGSVVSMIDRIAGSAP 1156

Query: 1081 GNGSRAAVGEDLVAMTKCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVSSAGSISESAR 902
            GNGSRAAVGEDLVAMTKCRLQARNF TQDG +G +KMRR TSAMP +VVSSAGS+++S +
Sbjct: 1157 GNGSRAAVGEDLVAMTKCRLQARNFITQDGSSGPRKMRRYTSAMPLSVVSSAGSMNDSFK 1216

Query: 901  LLNGSDASEMESTATSSIKRPRIETSHALSEEIHEINRLLIDTVVDICXXXXXXXXXXXX 722
             L GS+ S++ESTATSSIKRPR+E +HAL EEI EIN+ LIDTVVDI             
Sbjct: 1217 QLTGSETSDLESTATSSIKRPRMEANHALLEEIREINQRLIDTVVDISDEDADPTAAGSA 1276

Query: 721  XXXXXXTIVKCSFNAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEV 542
                  T+VKCSF+AVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVE+
Sbjct: 1277 GEGGEGTVVKCSFSAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEI 1336

Query: 541  SKEYEDLSIKAKSRFSISLRGLSQPMSLEEMAKTWDMCARAVISEYAQQSGGGTFSSKYG 362
            SKEYEDLS+KAKSRFSISLR LSQPMSL E+A+TWD+CAR VISEYAQQSGGG+FSSKYG
Sbjct: 1337 SKEYEDLSVKAKSRFSISLRSLSQPMSLGEIARTWDVCARTVISEYAQQSGGGSFSSKYG 1396

Query: 361  TWENCLSAS 335
            TWENCLSA+
Sbjct: 1397 TWENCLSAA 1405



 Score =  261 bits (667), Expect = 2e-66
 Identities = 141/211 (66%), Positives = 168/211 (79%), Gaps = 8/211 (3%)
 Frame = -1

Query: 4366 MDNVDWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQQ 4187
            +D  DWRTQLQ DSRQRIVNKIMDTLKRHLPFSGQ+GL ELKKIA RFEEKIYTAA+SQ 
Sbjct: 32   LDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQS 91

Query: 4186 DYLRKISLKMLTMETKSQNPMANSNATKN------PPDAVSHGMQSQMHNQPLSMPV--V 4031
            DYLRKISLKML+ME+KSQN M NS  + N      PPD  S  MQ+Q+HNQ  S+P+   
Sbjct: 92   DYLRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPGS--MQNQVHNQGQSLPIPLS 149

Query: 4030 SNQSQARQQLLPQNMQNSISSAGVQNSASLTSTLPAVGNLTQASMPNVVGQNNLQNMQNI 3851
            +NQSQ RQQLL QN+QN++SSAGVQ S+ L+S LP+V  L+Q+ +P+VVGQ    NMQN+
Sbjct: 150  ANQSQVRQQLLSQNIQNNMSSAGVQGSSGLSSALPSVSGLSQSPIPSVVGQT--VNMQNM 207

Query: 3850 SNVAQNPVGNSMGQGMPPNVFANSQRQMAGR 3758
            S ++QN  GNSMGQG+P N+FANSQRQ+ GR
Sbjct: 208  SGISQNSGGNSMGQGVPSNLFANSQRQIQGR 238


>gb|EMJ09336.1| hypothetical protein PRUPE_ppa000277mg [Prunus persica]
          Length = 1360

 Score =  894 bits (2310), Expect = 0.0
 Identities = 500/841 (59%), Positives = 597/841 (70%), Gaps = 11/841 (1%)
 Frame = -1

Query: 2824 RDMQQRLQTSGP----LLQQQNVIEQQKQLFQSQRAIPEASS---NPTAQTGNASGGDWQ 2666
            RDMQQRLQ SG     +LQ QNV++QQKQL+QSQR +PE SS   + TAQTG+A+GGDWQ
Sbjct: 533  RDMQQRLQASGQVPGTMLQPQNVMDQQKQLYQSQRPLPETSSTSLDSTAQTGHATGGDWQ 592

Query: 2665 EEVYQKIKSMKEMYYVELNEMYVKIATKLQQHESLSQQTKNEQHEKIKLFKAMLERLVQF 2486
            EEV+QKIK MKEMY  EL+EMY KIATKLQQH+SL QQ K+EQ +K+K+F+ MLERL+  
Sbjct: 593  EEVFQKIKVMKEMYLPELSEMYQKIATKLQQHDSLPQQPKSEQLDKLKMFRTMLERLISV 652

Query: 2485 LRMNKNDVQLAHKEKLGSVEKQIINILNSHRPRKXXXXXXXXXXXXXXXXXXXPAQ--IS 2312
            L+++K+ +    K+KL   EKQI+N +N++RPRK                    +Q  ++
Sbjct: 653  LQISKSSISPGLKDKLLLYEKQIVNFINTNRPRKPVSSLQQGQLPPPHMHSMQQSQSQMT 712

Query: 2311 QMQPHENQMNPQMQSMNVPSSVATIQQNSMSGLQQNSLSSVPAVSNAQQNMINAIQPASN 2132
            Q+Q HENQMNPQ+QSMN+  S   + Q++M+ LQQ+S+S++  VS AQQNM+N++ P+S+
Sbjct: 713  QVQSHENQMNPQLQSMNLQGSA--MPQSNMTSLQQSSMSALSGVSTAQQNMMNSLPPSSS 770

Query: 2131 PDGGQSTALSSLQQVAMNSLQQNPVSGPQSVNISSLTSQSGMNTLQSNLNSLQTNSTMLQ 1952
             D GQ  AL+SLQQV + S QQ PVS PQ  N+++L+SQSG+N LQ+N+NS+Q+ S MLQ
Sbjct: 771  MDSGQGNALNSLQQVPVGSNQQTPVSAPQQANMNALSSQSGVNMLQANMNSIQSTSGMLQ 830

Query: 1951 NQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 1772
            +QH                                                         
Sbjct: 831  HQHLKQQQEHQMFQNSLKQQFQHRQMQQQLMQKQQLLQHQQQQQQQQQQQQLQLQAKQQL 890

Query: 1771 PAQLPGHH--MSPLHQMTDSSDMKMRQQMGVKSGVFQQQHSTGQRAAYHHQQLKSGSPFS 1598
            PAQL  H   M  LHQM D +D+KMRQ MGVK GVFQQ  S GQRA Y H QLKSGSPF 
Sbjct: 891  PAQLQAHQQQMPQLHQMNDVNDLKMRQGMGVKQGVFQQHLSAGQRA-YPHPQLKSGSPFP 949

Query: 1597 ISSPQVLQAASPQVPQHPSPQIDQQNLLSSMTKAGTPLQSANSPFIMPSPSTPLAPSPMP 1418
             +  Q+LQAASPQ+ QH SPQ+DQQNLL+   KAGTPLQ+A+SPF++PSPSTP+APSPMP
Sbjct: 950  TN--QLLQAASPQISQHSSPQVDQQNLLTH-PKAGTPLQTASSPFVIPSPSTPMAPSPMP 1006

Query: 1417 GESEKVNSSISSLPNAGNIGGPQTAAVSGPAQSLAIGTPGISASPLLAEFTNLDAAHGTV 1238
            G+SEK     SSL NAGN+G  QT  V    QSLAIGTPGISASPLLAEF+  D  H   
Sbjct: 1007 GDSEKP----SSLSNAGNVGHQQTTGVGAQVQSLAIGTPGISASPLLAEFSVPDT-HVNA 1061

Query: 1237 SSVISNKSNAVEQPFERLIKAVKSVSREALTAXXXXXXXXXXXXDRIAGSAPGNGSRAAV 1058
             S IS KS+  EQP ERLIKAVKS+S  AL+A            DRIAGSAPGNGSRAAV
Sbjct: 1062 LSTISGKSSVTEQPLERLIKAVKSMSPNALSASVSDIGSVVSMIDRIAGSAPGNGSRAAV 1121

Query: 1057 GEDLVAMTKCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVSSAGSISESARLLNGSDAS 878
            GEDLVAMTKCRLQARN  T DG  GT+KMRR TSA+P NVVSSAGS+++S + L  S+ S
Sbjct: 1122 GEDLVAMTKCRLQARNVMTHDGTNGTRKMRRYTSAVPLNVVSSAGSMNDSFKQLTNSETS 1181

Query: 877  EMESTATSSIKRPRIETSHALSEEIHEINRLLIDTVVDICXXXXXXXXXXXXXXXXXXTI 698
            ++ESTATS IKRPRIE +HAL EEI EINR LIDTVV+I                    I
Sbjct: 1182 DLESTATSRIKRPRIEANHALLEEIREINRRLIDTVVNISDEDVDPSAAAAEGGEGT--I 1239

Query: 697  VKCSFNAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLS 518
            VKCSF+AVALSPNLKSQYASAQMSPIQPLRLLVP NYPNCSPILLDKFPVEVSKEYEDLS
Sbjct: 1240 VKCSFDAVALSPNLKSQYASAQMSPIQPLRLLVPMNYPNCSPILLDKFPVEVSKEYEDLS 1299

Query: 517  IKAKSRFSISLRGLSQPMSLEEMAKTWDMCARAVISEYAQQSGGGTFSSKYGTWENCLSA 338
            +KAKS+FSISLR +SQPMSL E+A+TWD+CARAVISE+AQQSGGG+FSSKYGTWENCLSA
Sbjct: 1300 VKAKSKFSISLRSISQPMSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYGTWENCLSA 1359

Query: 337  S 335
            +
Sbjct: 1360 A 1360



 Score =  255 bits (652), Expect = 1e-64
 Identities = 161/296 (54%), Positives = 181/296 (61%), Gaps = 9/296 (3%)
 Frame = -1

Query: 4366 MDNVDWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQQ 4187
            MD  DWR+QLQ DSRQRIVNKIMDTLKRHLPFSG EGLQELKKIAVRFEEKIYTAATSQ 
Sbjct: 16   MDAGDWRSQLQPDSRQRIVNKIMDTLKRHLPFSGHEGLQELKKIAVRFEEKIYTAATSQS 75

Query: 4186 DYLRKISLKMLTMETKSQNPMAN---SNATKN---PPDAV-SHGMQSQMHN--QPLSMPV 4034
            DYLRKISLKMLTMETKSQN MAN   SN+  N   PPD V S GMQ Q+ N  Q LSMP+
Sbjct: 76   DYLRKISLKMLTMETKSQNTMANSLQSNSAGNSNRPPDPVGSFGMQPQVPNQGQSLSMPL 135

Query: 4033 VSNQSQARQQLLPQNMQNSISSAGVQNSASLTSTLPAVGNLTQASMPNVVGQNNLQNMQN 3854
             +NQSQARQQLL QN+QN+I +AGVQ+SA L+S LP    LTQ  +P++VGQN  QNMQN
Sbjct: 136  PANQSQARQQLLSQNIQNNIPAAGVQSSAGLSSALPPSSGLTQTPIPSIVGQN--QNMQN 193

Query: 3853 ISNVAQNPVGNSMGQGMPPNVFANSQRQMAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 3674
                        MGQG+P N+FA SQRQ+ GR                            
Sbjct: 194  ------------MGQGVPSNMFATSQRQLPGRQQVVPQQQQQQQQQQQSQNSQQYMYHQQ 241

Query: 3673 XXXXXXXXXXXXLMQSHMXXXXXXXXXXXXXXXXXXQNLLQPAQIQTSQQAVMQPS 3506
                          Q ++                   NLLQP Q+Q+SQQ VMQ S
Sbjct: 242  LQHQQHPLLKPKYQQGNI--------PQLVQQQQQQPNLLQPTQLQSSQQPVMQTS 289


>ref|XP_003597955.1| hypothetical protein MTR_2g104400 [Medicago truncatula]
            gi|355487003|gb|AES68206.1| hypothetical protein
            MTR_2g104400 [Medicago truncatula]
          Length = 1289

 Score =  855 bits (2208), Expect = 0.0
 Identities = 495/976 (50%), Positives = 603/976 (61%), Gaps = 6/976 (0%)
 Frame = -1

Query: 3256 NATNIQQNQLIGQPNSIPDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMHQTQLGAQN 3077
            NATN+Q NQ++G  N++ D+                             N++Q QLG  N
Sbjct: 344  NATNMQHNQILGPQNNVGDLQQSQRLLAQQNNLSNLQQQKLINQQNNLSNINQ-QLG--N 400

Query: 3076 SVSGLQQSQMLGTQSGNSGMPVNQHSVHMLXXXXXXXXXXQHXXXXXXXXXXXXXXXXXX 2897
            +  GLQ  Q+LG QSGNSGM  +QHS H+L                              
Sbjct: 401  NAPGLQPQQVLGPQSGNSGMQTSQHSAHVLQQSKVPMQQQSQQGASNLLPSQPQQSQPQA 460

Query: 2896 XXXXXXXXXXXXXXXXXXXXXXXQRDMQQRLQTSGPLLQQQNVIEQQKQLFQSQRAIPEA 2717
                                   QRDMQQRLQ SG LLQQ  V +QQKQ++QSQR +PE 
Sbjct: 461  PQQQLMPQVQSQPAQLQQQPNPLQRDMQQRLQASGSLLQQSGVFDQQKQIYQSQRPLPET 520

Query: 2716 SSNP---TAQTGNASGGDWQEEVYQKIKSMKEMYYVELNEMYVKIATKLQQHESLSQQTK 2546
            SSN    TAQTG  SGGDWQEEVYQKIK+MKE Y  EL+EMY KIATKL QH+SL  Q K
Sbjct: 521  SSNSMDSTAQTGQTSGGDWQEEVYQKIKAMKESYLPELSEMYQKIATKLHQHDSLPHQPK 580

Query: 2545 NEQHEKIKLFKAMLERLVQFLRMNKNDVQLAHKEKLGSVEKQIINILNSHRPRKXXXXXX 2366
            ++Q EK+K+FK MLERL+ FL+++K+++  + KEKLGS EKQIIN +N++RPRK      
Sbjct: 581  SDQLEKLKVFKMMLERLITFLQVSKSNISPSLKEKLGSYEKQIINFINTNRPRKISSLQP 640

Query: 2365 XXXXXXXXXXXXXPA-QISQMQPHENQMNPQMQSMNVPSSVATIQQNSMSGLQQNSLSSV 2189
                            Q +Q+Q HENQMN Q+Q+ N+   V T+QQN+++ +Q +SLS V
Sbjct: 641  GQLPPPHMHSMSQTQPQATQVQSHENQMNTQLQTTNMQGPVPTMQQNNLTSMQHSSLSGV 700

Query: 2188 PAVSNAQQNMINAIQPASNPDGGQSTALSSLQQVAMNSLQQNPVSGPQSVNISSLTSQSG 2009
               S AQQNM+N +QP+++ D GQ           M+SLQQN V+ PQ            
Sbjct: 701  ---STAQQNMMNTMQPSASLDLGQGN---------MSSLQQNSVTAPQ------------ 736

Query: 2008 MNTLQSNLNSL--QTNSTMLQNQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1835
                Q+N++SL  Q    M+Q                                       
Sbjct: 737  ----QTNVSSLSSQAGVNMIQQNLNPLQPGSGMLQHQQLKQQQEQQMLQSQQFKQQYQRQ 792

Query: 1834 XXXXXXXXXXXXXXXXXXXXQPAQLPGHHMSPLHQMTDSSDMKMRQQMGVKSGVFQQQHS 1655
                                 PAQ+  H M  LHQM D +DMKMRQ +  K GVFQQ  +
Sbjct: 793  LMQRQQMIQQQQLHQPAKQQLPAQMQTHQMQQLHQMNDVNDMKMRQGINAKPGVFQQHLA 852

Query: 1654 TGQRAAYHHQQLKSGSPFSISSPQVLQAASPQVPQHPSPQIDQQNLLSSMTKAGTPLQSA 1475
            + QR+AY HQQLK G PF +SSPQ+LQA SPQ+ QH SPQ+DQQN L S+TK GTP+QSA
Sbjct: 853  SSQRSAYPHQQLKQG-PFPVSSPQLLQATSPQISQHSSPQVDQQNHLPSVTKVGTPMQSA 911

Query: 1474 NSPFIMPSPSTPLAPSPMPGESEKVNSSISSLPNAGNIGGPQTAAVSGPAQSLAIGTPGI 1295
            NSPFI+P+PS PLAPSPMPG+ EK  S +SS+ N  N+G  QT + + PAQSLAIGTPGI
Sbjct: 912  NSPFIIPTPSPPLAPSPMPGDFEKPISGVSSISNVANVGHQQTGSGAAPAQSLAIGTPGI 971

Query: 1294 SASPLLAEFTNLDAAHGTVSSVISNKSNAVEQPFERLIKAVKSVSREALTAXXXXXXXXX 1115
            SASPLLAEFT  D AHG   +  S KS   E+P +RLIKAV S++  AL+A         
Sbjct: 972  SASPLLAEFTGPDGAHGNALAPSSGKSTVTEEPMDRLIKAVSSLTPAALSAAVSDISSVI 1031

Query: 1114 XXXDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVV 935
               DRIAGSAPGNGSRAAVGEDLVAMT CRLQARNF TQDG  GT++M+R T+A P NVV
Sbjct: 1032 SMNDRIAGSAPGNGSRAAVGEDLVAMTNCRLQARNFITQDGANGTRRMKRCTNATPLNVV 1091

Query: 934  SSAGSISESARLLNGSDASEMESTATSSIKRPRIETSHALSEEIHEINRLLIDTVVDICX 755
            SSAGS+++S + LNG +AS++ESTATS+IK+P+ E +HAL EEI E+N+ LIDTVV I  
Sbjct: 1092 SSAGSVNDSIK-LNGMEASDLESTATSNIKKPKFEANHALLEEIREVNQRLIDTVVSISD 1150

Query: 754  XXXXXXXXXXXXXXXXXTIVKCSFNAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCS 575
                             TIVKCS+ AVALSP+LK+ Y SAQMSPI PLRLLVPTNYPN S
Sbjct: 1151 EEVDQTAAAAAAEGAEGTIVKCSYIAVALSPSLKALYGSAQMSPIHPLRLLVPTNYPNYS 1210

Query: 574  PILLDKFPVEVSKEYEDLSIKAKSRFSISLRGLSQPMSLEEMAKTWDMCARAVISEYAQQ 395
            PI LDKFPVE S E EDLS KAKSRFSISLRG SQPMSL+E+AK+WD+CAR VISEYAQQ
Sbjct: 1211 PIFLDKFPVESSIENEDLSAKAKSRFSISLRGFSQPMSLKEIAKSWDVCARTVISEYAQQ 1270

Query: 394  SGGGTFSSKYGTWENC 347
            SGGGTFSSKYG+WE+C
Sbjct: 1271 SGGGTFSSKYGSWEDC 1286



 Score =  181 bits (458), Expect = 4e-42
 Identities = 109/181 (60%), Positives = 125/181 (69%), Gaps = 8/181 (4%)
 Frame = -1

Query: 4366 MDNVDWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQQ 4187
            MD  DWR QLQ +SRQRIVNKIMDTLKRHLP SGQEGL EL+KIA RFEEKIYTAATSQ 
Sbjct: 16   MDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAQRFEEKIYTAATSQS 75

Query: 4186 DYLRKISLKMLTMETKSQNPMANS------NATKNPPDAVSHGMQSQMHNQPLSMPV-VS 4028
            DYLRKISLKMLTMETKSQ  ++N+        +  PPD    G+QSQ+ NQ    P+ + 
Sbjct: 76   DYLRKISLKMLTMETKSQGTISNNIPPNQVGPSNQPPDP-GLGIQSQVLNQGQQHPIPLP 134

Query: 4027 NQSQARQQLLPQNMQNSISSAGVQNSASLTSTLPAVGNLTQASMPNVVGQN-NLQNMQNI 3851
            NQ Q+RQQLL QN+QN+I+S            LP V  LTQ  + N  GQN N+QNM N 
Sbjct: 135  NQPQSRQQLLSQNIQNNIAS---------QPNLPPVSGLTQTPIAN--GQNSNIQNMFNA 183

Query: 3850 S 3848
            S
Sbjct: 184  S 184


>ref|XP_004486632.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like [Cicer arietinum]
          Length = 1313

 Score =  837 bits (2163), Expect = 0.0
 Identities = 464/830 (55%), Positives = 556/830 (66%), Gaps = 4/830 (0%)
 Frame = -1

Query: 2824 RDMQQRLQTSGPLLQQQNVIEQQKQLFQSQRAIPEASSNP---TAQTGNASGGDWQEEVY 2654
            RDMQQRLQ SG LLQ   V+EQQKQL+QSQR +PE SSN    TAQTG  SGGDWQEEVY
Sbjct: 502  RDMQQRLQASGSLLQHSGVLEQQKQLYQSQRPLPETSSNSMDSTAQTGQPSGGDWQEEVY 561

Query: 2653 QKIKSMKEMYYVELNEMYVKIATKLQQHESLSQQTKNEQHEKIKLFKAMLERLVQFLRMN 2474
            QKIK+MKE Y  EL+EMY KIA KLQQH+SL  Q K++Q EK+K+FK MLERL+ FL+++
Sbjct: 562  QKIKAMKESYLPELSEMYQKIAAKLQQHDSLPHQPKSDQLEKLKVFKLMLERLITFLQVS 621

Query: 2473 KNDVQLAHKEKLGSVEKQIINILNSHRPRKXXXXXXXXXXXXXXXXXXXP-AQISQMQPH 2297
            K+++  + KEKLGS EKQIIN +N++RPRK                     +Q++Q+Q H
Sbjct: 622  KSNISPSLKEKLGSYEKQIINFINTNRPRKMSSLQPGQLPPPHMHSMSQTQSQVTQVQSH 681

Query: 2296 ENQMNPQMQSMNVPSSVATIQQNSMSGLQQNSLSSVPAVSNAQQNMINAIQPASNPDGGQ 2117
            ENQMN Q+Q+ N+   VAT+QQN+M+ +Q NSLS +   S  QQNM+N +Q ++N D  Q
Sbjct: 682  ENQMNTQLQTTNMQGPVATMQQNNMTSMQHNSLSGL---STTQQNMMNTMQSSANLDSAQ 738

Query: 2116 STALSSLQQVAMNSLQQNPVSGPQSVNISSLTSQSGMNTLQSNLNSLQTNSTMLQNQHXX 1937
                       MNSLQQ PVS  Q   +++          Q+N +SL + + +   Q   
Sbjct: 739  GN---------MNSLQQVPVSSLQQNPVTA--------PQQTNASSLSSQAGVNVIQPNL 781

Query: 1936 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAQLP 1757
                                                                   PAQL 
Sbjct: 782  QPGSSMLQHQQLKQQQEQQMLQNQQFKQQYQRQLMQRQQMLQQQQQLHQPAKQQLPAQLQ 841

Query: 1756 GHHMSPLHQMTDSSDMKMRQQMGVKSGVFQQQHSTGQRAAYHHQQLKSGSPFSISSPQVL 1577
             H M  LHQM D +DMKMR  +G K GVFQQ  ++ QR+ Y HQQ+K G PF +SSPQ+L
Sbjct: 842  THQMQQLHQMNDVNDMKMRHGIGGKPGVFQQHLASSQRSTYPHQQMKQG-PFPVSSPQLL 900

Query: 1576 QAASPQVPQHPSPQIDQQNLLSSMTKAGTPLQSANSPFIMPSPSTPLAPSPMPGESEKVN 1397
            QA SPQ+PQH SPQ+DQ N L S+TK GTPLQSANSPF++P+PS PLAPSPMPG+SEK  
Sbjct: 901  QATSPQIPQHSSPQVDQHNHLPSLTKVGTPLQSANSPFVVPTPSPPLAPSPMPGDSEKPI 960

Query: 1396 SSISSLPNAGNIGGPQTAAVSGPAQSLAIGTPGISASPLLAEFTNLDAAHGTVSSVISNK 1217
            S +S + NA N+G  QT   + PAQSLAIGTPGISASPLLAEFT  D AHG      S K
Sbjct: 961  SGVSLISNAANVGHQQTGGAAAPAQSLAIGTPGISASPLLAEFTGPDGAHGNALVPSSGK 1020

Query: 1216 SNAVEQPFERLIKAVKSVSREALTAXXXXXXXXXXXXDRIAGSAPGNGSRAAVGEDLVAM 1037
            S   E+P +RLIKAV S++  AL+A            DRIAGSAPGNGSRAAVGEDLVAM
Sbjct: 1021 STVTEEPLDRLIKAVNSLTPAALSAAVSDISSVVSMNDRIAGSAPGNGSRAAVGEDLVAM 1080

Query: 1036 TKCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVSSAGSISESARLLNGSDASEMESTAT 857
            T CRLQARNF TQDG  GT++M+R T+A P NVVSSAGS+++S + L   +AS++ESTAT
Sbjct: 1081 TNCRLQARNFITQDGANGTRRMKRCTNATPLNVVSSAGSVNDSFKQLTAMEASDLESTAT 1140

Query: 856  SSIKRPRIETSHALSEEIHEINRLLIDTVVDICXXXXXXXXXXXXXXXXXXTIVKCSFNA 677
            S+IK+PR E +HAL EEI E+N+ LIDTVV I                   TIVKCSF A
Sbjct: 1141 SNIKKPRFEANHALLEEIREVNQRLIDTVVSISDEEVDPTAAAAAAEGAEGTIVKCSFIA 1200

Query: 676  VALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIKAKSRF 497
            VALSP+LKS YASAQMSPIQPLRLLVPTNYPNCSPI LDKFPVE S E EDLS KAKS+F
Sbjct: 1201 VALSPSLKSLYASAQMSPIQPLRLLVPTNYPNCSPIFLDKFPVESSMENEDLSAKAKSKF 1260

Query: 496  SISLRGLSQPMSLEEMAKTWDMCARAVISEYAQQSGGGTFSSKYGTWENC 347
            SISLRGLSQ MSL+E+AKTWD+CAR VISEYAQQSGGGTFSSKYG+WE+C
Sbjct: 1261 SISLRGLSQTMSLKEIAKTWDVCARTVISEYAQQSGGGTFSSKYGSWEDC 1310



 Score =  186 bits (472), Expect = 9e-44
 Identities = 112/209 (53%), Positives = 131/209 (62%), Gaps = 6/209 (2%)
 Frame = -1

Query: 4366 MDNVDWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQQ 4187
            MD+ DWR QLQ +SRQR+VNKIMDTLKRHLP SGQEGL EL+KIA RFEEKI+TAATSQ 
Sbjct: 16   MDSSDWRGQLQPESRQRVVNKIMDTLKRHLPVSGQEGLLELRKIAQRFEEKIFTAATSQP 75

Query: 4186 DYLRKISLKMLTMETKSQNPMANS-----NATKNPPDAVSHGMQSQMHNQPLSMPV-VSN 4025
            DYLRKISLKMLTMETKSQ  MAN+         N P      MQSQ+HNQ    P+ +SN
Sbjct: 76   DYLRKISLKMLTMETKSQGTMANNIPSNQGGPSNKPPDPGLVMQSQVHNQGQQHPIPLSN 135

Query: 4024 QSQARQQLLPQNMQNSISSAGVQNSASLTSTLPAVGNLTQASMPNVVGQNNLQNMQNISN 3845
            Q Q+RQQLL QN+Q++++S            LP+V  L Q  +PNV   +N+QNM     
Sbjct: 136  QPQSRQQLLSQNIQSNMAS---------QPNLPSVSGLAQTPIPNVGQNSNIQNM----- 181

Query: 3844 VAQNPVGNSMGQGMPPNVFANSQRQMAGR 3758
                              F  SQRQM GR
Sbjct: 182  ------------------FNGSQRQMQGR 192


>ref|XP_002298206.1| hypothetical protein POPTR_0001s21200g [Populus trichocarpa]
            gi|222845464|gb|EEE83011.1| hypothetical protein
            POPTR_0001s21200g [Populus trichocarpa]
          Length = 772

 Score =  806 bits (2082), Expect = 0.0
 Identities = 446/773 (57%), Positives = 531/773 (68%), Gaps = 2/773 (0%)
 Frame = -1

Query: 2647 IKSMKEMYYVELNEMYVKIATKLQQHESLSQQTKNEQHEKIKLFKAMLERLVQFLRMNKN 2468
            IK MKEMY+ E+NE+Y +IA KL QH+S  QQ K+EQ +K+K  K MLERL+ FL++ KN
Sbjct: 8    IKVMKEMYFPEINEIYQRIAAKLPQHDSHPQQPKSEQLDKLKALKTMLERLIMFLQVPKN 67

Query: 2467 DVQLAHKEKLGSVEKQIINILNSHRPRKXXXXXXXXXXXXXXXXXXXP--AQISQMQPHE 2294
            +++L  KEKLG  E QI+N LN+ RPRK                      +Q+ Q+Q HE
Sbjct: 68   NIKLNFKEKLGYYENQILNFLNTSRPRKPVPNLQQGQLPQLHMQPMQRPQSQVPQLQSHE 127

Query: 2293 NQMNPQMQSMNVPSSVATIQQNSMSGLQQNSLSSVPAVSNAQQNMINAIQPASNPDGGQS 2114
            NQ+NPQ+QSMN+  SV T+QQN++  L  NSLSS+  VS +Q N +N +Q ASN D GQ 
Sbjct: 128  NQLNPQLQSMNLQGSVPTMQQNNVPSLPHNSLSSLSGVSTSQPNKMNPMQSASNLDSGQG 187

Query: 2113 TALSSLQQVAMNSLQQNPVSGPQSVNISSLTSQSGMNTLQSNLNSLQTNSTMLQNQHXXX 1934
             +LSSLQQ  + S+QQNPVS  Q  N ++L++QSG++ LQSN+  LQ NS M+Q Q    
Sbjct: 188  NSLSSLQQAPVGSVQQNPVSSSQPTNFNTLSTQSGVSMLQSNI-PLQLNSNMIQ-QQHLK 245

Query: 1933 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAQLPG 1754
                                                                  PAQ+  
Sbjct: 246  QQMLQTQQLKQQFQQRQPQQQQRQTQQQQHLMQKQQMLLQQQQQQLHQQAKQQLPAQMQT 305

Query: 1753 HHMSPLHQMTDSSDMKMRQQMGVKSGVFQQQHSTGQRAAYHHQQLKSGSPFSISSPQVLQ 1574
              +   HQM D ++MK+RQ +G+K  VFQQ  STGQR A+ HQQ+K GS F ISSPQ+LQ
Sbjct: 306  QQIPQPHQMNDVNEMKLRQGIGIKPAVFQQHLSTGQRTAFPHQQMKPGSSFPISSPQMLQ 365

Query: 1573 AASPQVPQHPSPQIDQQNLLSSMTKAGTPLQSANSPFIMPSPSTPLAPSPMPGESEKVNS 1394
             ASPQ+ QH SPQIDQQNLL S+TK GTPLQSANSPF++PSPSTPLAPSP+PG+SEK  S
Sbjct: 366  HASPQLQQHSSPQIDQQNLLPSLTKTGTPLQSANSPFVVPSPSTPLAPSPVPGDSEKPIS 425

Query: 1393 SISSLPNAGNIGGPQTAAVSGPAQSLAIGTPGISASPLLAEFTNLDAAHGTVSSVISNKS 1214
             ISS     NI    T A    A SLAIGTPGISASPLLAEFT+ D AHG   + +S KS
Sbjct: 426  GISS-----NIVHQPTVA-QATAPSLAIGTPGISASPLLAEFTSPDGAHGGALTTVSGKS 479

Query: 1213 NAVEQPFERLIKAVKSVSREALTAXXXXXXXXXXXXDRIAGSAPGNGSRAAVGEDLVAMT 1034
            N +EQP ER+IKAVKS+S +AL+A            DRIAGSAPGNGSRAAVGEDLVAMT
Sbjct: 480  NVMEQPLERMIKAVKSLSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMT 539

Query: 1033 KCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVSSAGSISESARLLNGSDASEMESTATS 854
            KCRLQARNFFTQDG TG+KKMRR TSAMP NV SSAGS+S+S +   G + S++EST TS
Sbjct: 540  KCRLQARNFFTQDGMTGSKKMRRHTSAMPLNVASSAGSVSDSFKQFTGPETSDLESTVTS 599

Query: 853  SIKRPRIETSHALSEEIHEINRLLIDTVVDICXXXXXXXXXXXXXXXXXXTIVKCSFNAV 674
            S+KRP+IE +HAL EEI EIN+ L+DTVVDI                   T VKCSF AV
Sbjct: 600  SVKRPKIEANHALLEEIREINQRLLDTVVDISDEDVDSTAAAAAAEGGGGTFVKCSFIAV 659

Query: 673  ALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIKAKSRFS 494
            ALSPNLK+QY SAQMS IQPLRLLVPTNYPNCSPILLDKFP EVSKEYEDLSIKAK RFS
Sbjct: 660  ALSPNLKAQYTSAQMSTIQPLRLLVPTNYPNCSPILLDKFPFEVSKEYEDLSIKAKFRFS 719

Query: 493  ISLRGLSQPMSLEEMAKTWDMCARAVISEYAQQSGGGTFSSKYGTWENCLSAS 335
            ISLR LSQPMSL ++A+TWD+CA AVISE+AQQSGGGTFSSKYG+WENC+SA+
Sbjct: 720  ISLRSLSQPMSLGDIARTWDVCAHAVISEHAQQSGGGTFSSKYGSWENCVSAA 772


>ref|XP_006465237.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like isoform X1 [Citrus sinensis]
          Length = 1378

 Score =  662 bits (1709), Expect = 0.0
 Identities = 343/479 (71%), Positives = 389/479 (81%)
 Frame = -1

Query: 1771 PAQLPGHHMSPLHQMTDSSDMKMRQQMGVKSGVFQQQHSTGQRAAYHHQQLKSGSPFSIS 1592
            PAQLP H M  L+QM D +D+K+RQ M VK GVFQQ  ++GQR+AY HQ LK G+ FSIS
Sbjct: 900  PAQLPTHQMPQLNQMNDVNDLKIRQGMAVKPGVFQQHLTSGQRSAYSHQPLKPGAQFSIS 959

Query: 1591 SPQVLQAASPQVPQHPSPQIDQQNLLSSMTKAGTPLQSANSPFIMPSPSTPLAPSPMPGE 1412
            SPQ+LQ ASPQ+PQH SPQ+DQQNLL S+TK+GTPLQ  NSPF++PSPSTP+APSPMPG+
Sbjct: 960  SPQLLQTASPQIPQHSSPQVDQQNLLQSITKSGTPLQPVNSPFVVPSPSTPMAPSPMPGD 1019

Query: 1411 SEKVNSSISSLPNAGNIGGPQTAAVSGPAQSLAIGTPGISASPLLAEFTNLDAAHGTVSS 1232
            SEK  S ISSL NAGNIG  QT++    A SLAIGTPGISASPLLAEFT  D AHG   +
Sbjct: 1020 SEKPISGISSLSNAGNIGHQQTSSAQAAAPSLAIGTPGISASPLLAEFTGPDGAHGNALT 1079

Query: 1231 VISNKSNAVEQPFERLIKAVKSVSREALTAXXXXXXXXXXXXDRIAGSAPGNGSRAAVGE 1052
             IS K++  EQP ERLIKAVKS+S +AL+A            DRIAGSAPGNGSRAAVGE
Sbjct: 1080 AISIKASVTEQPLERLIKAVKSMSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGE 1139

Query: 1051 DLVAMTKCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVSSAGSISESARLLNGSDASEM 872
            DLVAMTKCRLQARNF TQDG +G +KMRR TSAMP +VVSSAGS+++S + L GS+ S++
Sbjct: 1140 DLVAMTKCRLQARNFITQDGSSGPRKMRRYTSAMPLSVVSSAGSMNDSFKQLTGSETSDL 1199

Query: 871  ESTATSSIKRPRIETSHALSEEIHEINRLLIDTVVDICXXXXXXXXXXXXXXXXXXTIVK 692
            ESTATSSIKRPRIE +HAL EEI EIN+ LIDTVVDI                   T+VK
Sbjct: 1200 ESTATSSIKRPRIEANHALLEEIREINQRLIDTVVDISDEDADPTAAGSAGEGGEGTVVK 1259

Query: 691  CSFNAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIK 512
            CSF+AVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVE+SKEYEDLS+K
Sbjct: 1260 CSFSAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEISKEYEDLSVK 1319

Query: 511  AKSRFSISLRGLSQPMSLEEMAKTWDMCARAVISEYAQQSGGGTFSSKYGTWENCLSAS 335
            AKSRFSISLR LSQPMSL E+A+TWD+CAR VISEYAQQSGGG+FSSKYGTWENCLSA+
Sbjct: 1320 AKSRFSISLRSLSQPMSLGEIARTWDVCARTVISEYAQQSGGGSFSSKYGTWENCLSAA 1378



 Score =  326 bits (836), Expect = 6e-86
 Identities = 172/304 (56%), Positives = 222/304 (73%), Gaps = 10/304 (3%)
 Frame = -1

Query: 2824 RDMQQRLQTSGP----LLQQQNVIEQQKQLFQSQRAIPEASS---NPTAQTGNASGGDWQ 2666
            RDMQQRLQ SG     LLQ QNV++QQKQL+Q QRA+PE SS   + T QTG A+G DWQ
Sbjct: 540  RDMQQRLQASGQASASLLQPQNVMDQQKQLYQPQRALPETSSTSLDSTHQTGQANGVDWQ 599

Query: 2665 EEVYQKIKSMKEMYYVELNEMYVKIATKLQQHESLSQQTKNEQHEKIKLFKAMLERLVQF 2486
            EEVYQKIK+MKEMY  ELNEMY KIA KLQQH+SL QQ K++Q EK+K+FK MLER++ F
Sbjct: 600  EEVYQKIKTMKEMYLPELNEMYQKIAAKLQQHDSLPQQPKSDQLEKLKIFKTMLERIITF 659

Query: 2485 LRMNKNDVQLAHKEKLGSVEKQIINILNSHRPRKXXXXXXXXXXXXXXXXXXXP---AQI 2315
            L+++K+++    KEKLGS EKQI+N ++++RPRK                       +QI
Sbjct: 660  LQVSKSNILPGFKEKLGSYEKQIVNFISTNRPRKPVSSMQQQGQLPPTHMHSMQQQQSQI 719

Query: 2314 SQMQPHENQMNPQMQSMNVPSSVATIQQNSMSGLQQNSLSSVPAVSNAQQNMINAIQPAS 2135
            SQ QPH+NQMN Q+QSMN+  S+ T+QQN+++ +Q NS+ SV  VS +QQNM+N++QP  
Sbjct: 720  SQGQPHDNQMNSQIQSMNLAGSMVTMQQNNVTNVQHNSVPSVSGVSTSQQNMLNSVQPGP 779

Query: 2134 NPDGGQSTALSSLQQVAMNSLQQNPVSGPQSVNISSLTSQSGMNTLQSNLNSLQTNSTML 1955
            N D GQ T+LSS+ QV   SLQQN VS PQ  +I++L SQSG+N LQSN+N LQ+NS M+
Sbjct: 780  NMDSGQGTSLSSMHQVNAGSLQQNSVSAPQQASINNLPSQSGVNMLQSNINPLQSNSNMM 839

Query: 1954 QNQH 1943
            Q+QH
Sbjct: 840  QHQH 843



 Score =  261 bits (668), Expect = 2e-66
 Identities = 141/211 (66%), Positives = 168/211 (79%), Gaps = 8/211 (3%)
 Frame = -1

Query: 4366 MDNVDWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQQ 4187
            +D  DWRTQLQ DSRQRIVNKIMDTLKRHLPFSGQ+GL ELKKIA RFEEKIYTAA+SQ 
Sbjct: 17   LDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQS 76

Query: 4186 DYLRKISLKMLTMETKSQNPMANSNATKN------PPDAVSHGMQSQMHNQPLSMPV--V 4031
            DYLRKISLKML+ME+KSQN M NS  + N      PPD VS  MQ+Q+HNQ  S+P+   
Sbjct: 77   DYLRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPVS--MQNQVHNQGQSLPIPLS 134

Query: 4030 SNQSQARQQLLPQNMQNSISSAGVQNSASLTSTLPAVGNLTQASMPNVVGQNNLQNMQNI 3851
            +NQSQ RQQLL QN+QN++ SAGVQ S+ L+S LP+V  L+Q+ +P+VVGQ    NMQN+
Sbjct: 135  ANQSQVRQQLLSQNIQNNMLSAGVQGSSGLSSALPSVSGLSQSPIPSVVGQT--VNMQNM 192

Query: 3850 SNVAQNPVGNSMGQGMPPNVFANSQRQMAGR 3758
            S ++QN  GNSMGQG+P N+FANSQRQ+ GR
Sbjct: 193  SGISQNSGGNSMGQGVPSNLFANSQRQIQGR 223


>ref|XP_006427496.1| hypothetical protein CICLE_v10024717mg [Citrus clementina]
            gi|557529486|gb|ESR40736.1| hypothetical protein
            CICLE_v10024717mg [Citrus clementina]
          Length = 1383

 Score =  662 bits (1708), Expect = 0.0
 Identities = 343/479 (71%), Positives = 388/479 (81%)
 Frame = -1

Query: 1771 PAQLPGHHMSPLHQMTDSSDMKMRQQMGVKSGVFQQQHSTGQRAAYHHQQLKSGSPFSIS 1592
            PAQLP H M  L+QM D +D+K+RQ M VK GVFQQ  ++GQR+AY HQ LK G+ F IS
Sbjct: 905  PAQLPTHQMPQLNQMNDVNDLKIRQGMAVKPGVFQQHLTSGQRSAYSHQPLKPGAQFPIS 964

Query: 1591 SPQVLQAASPQVPQHPSPQIDQQNLLSSMTKAGTPLQSANSPFIMPSPSTPLAPSPMPGE 1412
            SPQ+LQ ASPQ+PQH SPQ+DQQNLL S+TK+GTPLQS NSPF++PSPSTP+APSPMPG+
Sbjct: 965  SPQLLQTASPQIPQHSSPQVDQQNLLQSITKSGTPLQSVNSPFVVPSPSTPMAPSPMPGD 1024

Query: 1411 SEKVNSSISSLPNAGNIGGPQTAAVSGPAQSLAIGTPGISASPLLAEFTNLDAAHGTVSS 1232
            SEK  S ISSL NAGNIG  QT +    A SLAIGTPGISASPLLAEFT  D AHG   +
Sbjct: 1025 SEKPISGISSLSNAGNIGHQQTTSAQAAAPSLAIGTPGISASPLLAEFTGPDGAHGNALT 1084

Query: 1231 VISNKSNAVEQPFERLIKAVKSVSREALTAXXXXXXXXXXXXDRIAGSAPGNGSRAAVGE 1052
             IS K++  EQP ERLIKAVKS+S +AL+A            DRIAGSAPGNGSRAAVGE
Sbjct: 1085 AISIKASVTEQPLERLIKAVKSMSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGE 1144

Query: 1051 DLVAMTKCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVSSAGSISESARLLNGSDASEM 872
            DLVAMTKCRLQARNF TQDG +G +KMRR TSAMP +VVSSAGS+++S + L GS+ S++
Sbjct: 1145 DLVAMTKCRLQARNFITQDGSSGPRKMRRYTSAMPLSVVSSAGSMNDSFKQLTGSETSDL 1204

Query: 871  ESTATSSIKRPRIETSHALSEEIHEINRLLIDTVVDICXXXXXXXXXXXXXXXXXXTIVK 692
            ESTATSSIKRPRIE +HAL EEI EIN+ LIDTVVDI                   T+VK
Sbjct: 1205 ESTATSSIKRPRIEANHALLEEIREINQRLIDTVVDISDEDADPTAAGSAGEGGEGTVVK 1264

Query: 691  CSFNAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIK 512
            CSF+AVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVE+SKEYEDLS+K
Sbjct: 1265 CSFSAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEISKEYEDLSVK 1324

Query: 511  AKSRFSISLRGLSQPMSLEEMAKTWDMCARAVISEYAQQSGGGTFSSKYGTWENCLSAS 335
            AKSRFSISLR LSQPMSL E+A+TWD+CAR VISEYAQQSGGG+FSSKYGTWENCLSA+
Sbjct: 1325 AKSRFSISLRSLSQPMSLGEIARTWDVCARTVISEYAQQSGGGSFSSKYGTWENCLSAA 1383



 Score =  325 bits (832), Expect = 2e-85
 Identities = 171/304 (56%), Positives = 222/304 (73%), Gaps = 10/304 (3%)
 Frame = -1

Query: 2824 RDMQQRLQTSGP----LLQQQNVIEQQKQLFQSQRAIPEASS---NPTAQTGNASGGDWQ 2666
            RDMQQRLQ SG     LLQ QNV++QQKQL+Q QRA+PE SS   + T QTG A+G DWQ
Sbjct: 545  RDMQQRLQASGQASASLLQPQNVMDQQKQLYQPQRALPETSSTSLDSTHQTGQANGVDWQ 604

Query: 2665 EEVYQKIKSMKEMYYVELNEMYVKIATKLQQHESLSQQTKNEQHEKIKLFKAMLERLVQF 2486
            EEVYQKIK+MKEMY  ELNEMY KIA KLQQH+SL QQ K++Q EK+K+FK MLER++ F
Sbjct: 605  EEVYQKIKTMKEMYLPELNEMYQKIAAKLQQHDSLPQQPKSDQLEKLKIFKTMLERIITF 664

Query: 2485 LRMNKNDVQLAHKEKLGSVEKQIINILNSHRPRKXXXXXXXXXXXXXXXXXXXP---AQI 2315
            L+++K+++    KEKLGS EKQI+N ++++RPRK                       +QI
Sbjct: 665  LQVSKSNILPGFKEKLGSYEKQIVNFISTNRPRKPVSSMQQQGQLPPTHMHSMQQQQSQI 724

Query: 2314 SQMQPHENQMNPQMQSMNVPSSVATIQQNSMSGLQQNSLSSVPAVSNAQQNMINAIQPAS 2135
            SQ QPH+NQMN Q+QSMN+  S+ T+Q N+++ +Q NS+ SV  VS +QQNM+N++QP  
Sbjct: 725  SQGQPHDNQMNSQIQSMNLAGSMVTMQPNNVTNVQHNSVPSVSGVSTSQQNMLNSVQPGP 784

Query: 2134 NPDGGQSTALSSLQQVAMNSLQQNPVSGPQSVNISSLTSQSGMNTLQSNLNSLQTNSTML 1955
            N D GQ T+LSS+ QV   SLQQN VS PQ  +I++L SQSG+N LQSN+N+LQ+NS M+
Sbjct: 785  NMDSGQGTSLSSMHQVNAGSLQQNSVSAPQQASINNLPSQSGVNMLQSNINALQSNSNMM 844

Query: 1954 QNQH 1943
            Q+QH
Sbjct: 845  QHQH 848



 Score =  259 bits (661), Expect = 1e-65
 Identities = 140/211 (66%), Positives = 167/211 (79%), Gaps = 8/211 (3%)
 Frame = -1

Query: 4366 MDNVDWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQQ 4187
            +D  DWRTQLQ DSRQRIVNKIMDTLKRHLPFSGQ+GL ELKKIA RFEEKIYTAA+SQ 
Sbjct: 17   LDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQS 76

Query: 4186 DYLRKISLKMLTMETKSQNPMANSNATKN------PPDAVSHGMQSQMHNQPLSMPV--V 4031
            DYLRKISLKML+ME+KSQN M NS  + N      PPD  S  MQ+Q+HNQ  S+P+   
Sbjct: 77   DYLRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPGS--MQNQVHNQGQSLPIPLS 134

Query: 4030 SNQSQARQQLLPQNMQNSISSAGVQNSASLTSTLPAVGNLTQASMPNVVGQNNLQNMQNI 3851
            +NQSQ RQQLL QN+QN++ SAGVQ S+ L+S LP+V  L+Q+ +P+VVGQ    NMQN+
Sbjct: 135  ANQSQVRQQLLSQNIQNNMLSAGVQGSSGLSSALPSVSGLSQSPIPSVVGQT--VNMQNM 192

Query: 3850 SNVAQNPVGNSMGQGMPPNVFANSQRQMAGR 3758
            S ++QN  GNSMGQG+P N+FANSQRQ+ GR
Sbjct: 193  SGISQNSGGNSMGQGVPSNLFANSQRQIQGR 223


>ref|XP_006306593.1| hypothetical protein CARUB_v10008096mg [Capsella rubella]
            gi|482575304|gb|EOA39491.1| hypothetical protein
            CARUB_v10008096mg [Capsella rubella]
          Length = 1344

 Score =  652 bits (1681), Expect = 0.0
 Identities = 405/841 (48%), Positives = 509/841 (60%), Gaps = 11/841 (1%)
 Frame = -1

Query: 2824 RDMQQRLQTSGP----LLQQQNVIEQQKQLFQSQRAIPE---ASSNPTAQTGNASGGDWQ 2666
            +D+QQRLQ SG     LL  QNV++QQ+QL+Q+QR +PE   +S + TAQT +A+GGDWQ
Sbjct: 538  QDVQQRLQASGQVTGSLLPPQNVVDQQRQLYQTQRTLPEMPSSSLDSTAQTESANGGDWQ 597

Query: 2665 EEVYQKIKSMKEMYYVELNEMYVKIATKLQQHESLSQQTKNEQHEKIKLFKAMLERLVQF 2486
            EEV+QKIKSMKE Y  +LNE+Y ++A+KLQQ +S+ QQ +++Q EK+K FK MLER++QF
Sbjct: 598  EEVFQKIKSMKETYLPDLNEIYQRVASKLQQ-DSIPQQQRSDQFEKLKQFKTMLERMIQF 656

Query: 2485 LRMNKNDVQLAHKEKLGSVEKQIINILNSHRPRKXXXXXXXXXXXXXXXXXXXPAQISQM 2306
            L ++K+++  A K+K+   EKQII  LN HRPRK                    +Q  Q 
Sbjct: 657  LSVSKSNIMPALKDKVAHYEKQIIGFLNMHRPRKPVQQGQLPQSQMQQPMQQPQSQTVQE 716

Query: 2305 QPHENQMNPQMQSMNVPSSVATIQQNSMSGLQQNSLSSVPAVSNAQQNMINAIQPASNPD 2126
            Q H+NQ NPQMQSM++  +    QQ+S+               N Q N++++    S P 
Sbjct: 717  QSHDNQTNPQMQSMSMQGAGPRAQQSSLP--------------NMQNNVLSSRSGVSAP- 761

Query: 2125 GGQSTALSSLQQVAMNSLQQNPVSGPQSVNISSLTSQSGMNTLQSNLNSLQTNSTMLQNQ 1946
              Q    SS+   ++ S Q N ++  Q         Q  M ++Q N  S Q N +    Q
Sbjct: 762  --QQNIPSSIPASSLESGQGNALNNSQ---------QVPMGSMQQN-TSQQVNYSSASAQ 809

Query: 1945 HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPA 1766
                                                                     Q  
Sbjct: 810  SGLSALQSNINQPQLSSSLLQHQHMKQQQDQQMTQQIKQQFQHRQMQQQQLQARQQQQQQ 869

Query: 1765 QLPGHHMSP-LHQMTDSSDMKMRQQMGVKSGVFQQQHSTGQRAAYHHQQLKSGSPFSISS 1589
            QL     +  L QM D +D+  RQ M V  G+FQQ    GQRA Y  QQLK G+   +SS
Sbjct: 870  QLQARQQAAQLQQMNDMNDLTSRQGMNVSRGMFQQHSLQGQRATYPLQQLKPGA---VSS 926

Query: 1588 PQVLQAASPQVPQ-HPSPQIDQQNLLSSMTKAGTPLQSANSPFIMPSPSTPLAPSPMPGE 1412
            PQ+LQ ASPQ+ Q H SPQ+DQ+NL S++ K GTPLQ ANSPF++PSPSTPLAPSPM  +
Sbjct: 927  PQLLQGASPQMSQQHLSPQVDQKNL-STVNKMGTPLQPANSPFVVPSPSTPLAPSPMQVD 985

Query: 1411 SEKVNSSISSLPNAGNIGGPQTAAVSGPAQSLAIGTPGISASPLLAEFTNLDAAHGTVSS 1232
            SEK  S  SSL + GNI   Q   + G  QSLAIGTPGISASPLL EFT+ D +      
Sbjct: 986  SEKP-SGTSSL-SMGNIARQQVTGMQGVVQSLAIGTPGISASPLLQEFTSPDGSVLNPLI 1043

Query: 1231 VISNKSNAVEQPFERLIKAVKSVSREALTAXXXXXXXXXXXXDRIAGSAPGNGSRAAVGE 1052
              S K +A E P +RLI+AVKS+S +AL++            DRIAGSAPGNGSRA+VGE
Sbjct: 1044 TTSGKPSATELPIDRLIRAVKSISPQALSSAVSDIGSVVSMVDRIAGSAPGNGSRASVGE 1103

Query: 1051 DLVAMTKCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVSSAGSISESARLLNGSDASEM 872
            DLVAMTKCRLQARNF TQ+G   TKKM+R T+AMP +V S  GS+ ++ +   GS+ S++
Sbjct: 1104 DLVAMTKCRLQARNFMTQEGMMATKKMKRHTTAMPLSVASLGGSVGDNYKQYAGSETSDL 1163

Query: 871  ESTATSSIKRPRIETSHALSEEIHEINRLLIDTVVDIC--XXXXXXXXXXXXXXXXXXTI 698
            ESTATS  K+ R ET HAL EEI  IN+ LIDTVV+I                     T 
Sbjct: 1164 ESTATSDGKKARTETEHALLEEIKVINQRLIDTVVEISDDEDAADHSEGAISSKGCEGTT 1223

Query: 697  VKCSFNAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLS 518
            VK SF AV+LSP LK+  +S QMSPIQPLRLLVP +YPN SP LLDK PVE+SKE EDLS
Sbjct: 1224 VKFSFIAVSLSPALKAHLSSTQMSPIQPLRLLVPCSYPNGSPSLLDKVPVEISKENEDLS 1283

Query: 517  IKAKSRFSISLRGLSQPMSLEEMAKTWDMCARAVISEYAQQSGGGTFSSKYGTWENCLSA 338
             KA +RF+I LR LSQPMSL++MAKTWD CARAVI EYAQQ GGGTFSSKYGTWE  ++A
Sbjct: 1284 SKAMARFNILLRSLSQPMSLKDMAKTWDACARAVICEYAQQFGGGTFSSKYGTWEKYVAA 1343

Query: 337  S 335
            S
Sbjct: 1344 S 1344



 Score =  188 bits (477), Expect = 2e-44
 Identities = 106/205 (51%), Positives = 143/205 (69%), Gaps = 2/205 (0%)
 Frame = -1

Query: 4366 MDNVDWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQQ 4187
            MD+ DWRTQL  DSRQ+IVNKIM+TLK+HLPFSG EG+ EL++IA RFEEKI++ A +Q 
Sbjct: 17   MDSGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGAVNQT 76

Query: 4186 DYLRKISLKMLTMETKSQNPMANSNATKNPPDAVSHGMQSQMHNQPLSMP--VVSNQSQA 4013
            DYLRKIS+KMLTMETKSQN   +S++     +  S  M S   NQ + +P  + +NQSQA
Sbjct: 77   DYLRKISMKMLTMETKSQNAAGSSSSIPAANNGTS--MDSIPTNQGIHIPGSLPTNQSQA 134

Query: 4012 RQQLLPQNMQNSISSAGVQNSASLTSTLPAVGNLTQASMPNVVGQNNLQNMQNISNVAQN 3833
             Q LL Q MQN+ +S G+  S +L S++P V ++T  ++ +VV QN   NMQN++ + Q+
Sbjct: 135  PQPLLSQTMQNNTAS-GMTGSTALPSSMPPVSSITNNNVASVVNQNT--NMQNVAGMLQD 191

Query: 3832 PVGNSMGQGMPPNVFANSQRQMAGR 3758
              G     G+  N+F+ SQRQM GR
Sbjct: 192  SSGQ---HGLSSNMFSGSQRQMLGR 213


>ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264243 [Vitis vinifera]
          Length = 1671

 Score =  643 bits (1659), Expect = 0.0
 Identities = 342/481 (71%), Positives = 381/481 (79%), Gaps = 2/481 (0%)
 Frame = -1

Query: 1771 PAQLPGHHMSPLHQMTDSSDMKMRQQMGV-KSGVFQQQHSTGQRAAYHHQQLKSGSPFSI 1595
            PAQL  H MS  HQM D +D+KMRQ M   K GVF Q     QR+AY  QQLKSG+ F I
Sbjct: 1192 PAQLQAHQMSQPHQMNDVNDLKMRQGMSANKPGVFHQHQGAVQRSAYP-QQLKSGTSFPI 1250

Query: 1594 SSPQVLQAASPQVPQHPSPQIDQQNLLSSMTKAGTPLQSANSPFIMPSPSTPLAPSPMPG 1415
            SSPQ+LQ ASPQ+PQH SPQIDQQNLL+S+TKAGTPLQSANSPF++PSPSTPLAPSPMPG
Sbjct: 1251 SSPQLLQTASPQIPQHSSPQIDQQNLLTSLTKAGTPLQSANSPFVVPSPSTPLAPSPMPG 1310

Query: 1414 ESEKVNSSISSLPNAGNIGGPQTAAVSGPAQSLAIGTPGISASPLLAEFTNLDAAHGTVS 1235
            ESEK+NS IS + NAGNIG  QT     P  SLAIGTPGISASPLLAEFT+LD  HG  S
Sbjct: 1311 ESEKLNSGISLITNAGNIGHHQTTGALAPPPSLAIGTPGISASPLLAEFTSLDGNHGNAS 1370

Query: 1234 SVISNKSNAVEQPFERLIKAVKSVSREALTAXXXXXXXXXXXXDRIAGSAPGNGSRAAVG 1055
            +++S KS+  EQP ERLIK VK +S +AL+A            DRIAGSAPGNGSRAAVG
Sbjct: 1371 TMVSGKSSVTEQPLERLIKVVKLMSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVG 1430

Query: 1054 EDLVAMTKCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVSSAGSISESARLLNGSDASE 875
            EDLVAMTKCRLQARNF T DG  GT+KMRR TSAMP NVVSSAGS+++S + L GS+ S+
Sbjct: 1431 EDLVAMTKCRLQARNFITLDGAAGTRKMRRYTSAMPLNVVSSAGSVNDSFKQLAGSETSD 1490

Query: 874  MESTATSSIKRPRIETSHALSEEIHEINRLLIDTVVDIC-XXXXXXXXXXXXXXXXXXTI 698
            +ESTATSS KRPRIE +HAL EEI EIN+ LIDTVVDI                    TI
Sbjct: 1491 LESTATSSAKRPRIEVNHALLEEIREINQRLIDTVVDISHEDVDPAAAAAAAAEGGEGTI 1550

Query: 697  VKCSFNAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLS 518
            VKCSF+AVALSPNLKSQY S QMSPIQPLRLLVPTNYPN SPILLDKFPVE+SKEYEDLS
Sbjct: 1551 VKCSFSAVALSPNLKSQYTSTQMSPIQPLRLLVPTNYPNSSPILLDKFPVEISKEYEDLS 1610

Query: 517  IKAKSRFSISLRGLSQPMSLEEMAKTWDMCARAVISEYAQQSGGGTFSSKYGTWENCLSA 338
            +KAKSRFSISLR LSQPMSL E+A+TWD+CARAVISEYAQQSGGG+FSS+YG WENCLSA
Sbjct: 1611 VKAKSRFSISLRSLSQPMSLGEIARTWDVCARAVISEYAQQSGGGSFSSRYGAWENCLSA 1670

Query: 337  S 335
            +
Sbjct: 1671 A 1671



 Score =  374 bits (959), Expect = e-100
 Identities = 218/459 (47%), Positives = 271/459 (59%), Gaps = 20/459 (4%)
 Frame = -1

Query: 3259 PNATNIQQNQLIGQPNSIPDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN--------- 3107
            PNAT +Q NQLIGQ NS  D+                             +         
Sbjct: 674  PNATTMQSNQLIGQQNSFSDLQQQQQQQQQRLLSQQNNLPNLQQQQQQQQHQLMAQQSNL 733

Query: 3106 --MHQTQLGAQNSVSGLQQSQ-MLGTQSGNSGMPVNQHSVHMLXXXXXXXXXXQHXXXXX 2936
              +HQ QLG Q++VS LQQ Q MLGTQSGN  M  NQH VH+L                 
Sbjct: 734  SNIHQQQLGHQSNVSALQQQQQMLGTQSGNPSMQTNQHPVHILQQSKVPVQQQTQQGVSN 793

Query: 2935 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRDMQQRLQTSGPLLQQQNVIEQQ 2756
                                                QRDMQQRLQTSG LLQ QNVI+QQ
Sbjct: 794  LLATQGQQSQQQPSQQQLMSQFQSQSTQLQPQPNSLQRDMQQRLQTSGALLQTQNVIDQQ 853

Query: 2755 KQLFQSQRAIPEASS---NPTAQTGNASGGDWQEEVYQKIKSMKEMYYVELNEMYVKIAT 2585
            KQLFQSQRA+PEASS   + TAQTG  + GDWQEEVYQKIK MKEMY  +LNEM+ KIA 
Sbjct: 854  KQLFQSQRALPEASSTSLDSTAQTGTINVGDWQEEVYQKIKRMKEMYLPDLNEMHQKIAA 913

Query: 2584 KLQQHESLSQQTKNEQHEKIKLFKAMLERLVQFLRMNKNDVQLAHKEKLGSVEKQIINIL 2405
            KLQQH+SL QQ K EQ EK+K+FKAMLER++  L+++KN +    KEKL   EKQI++ +
Sbjct: 914  KLQQHDSLPQQPKTEQLEKLKIFKAMLERMITVLQLSKNSITPNFKEKLIGYEKQIVSFI 973

Query: 2404 NSHRPRKXXXXXXXXXXXXXXXXXXXP-----AQISQMQPHENQMNPQMQSMNVPSSVAT 2240
            N+HRPRK                         +Q+SQ QPHENQMNPQ+Q MN+  SVAT
Sbjct: 974  NTHRPRKPVPPLQHGQSSVSHMHSMQQPQQSQSQLSQGQPHENQMNPQLQPMNLQGSVAT 1033

Query: 2239 IQQNSMSGLQQNSLSSVPAVSNAQQNMINAIQPASNPDGGQSTALSSLQQVAMNSLQQNP 2060
            +QQN++  LQ +S+ S+  + NAQQN++N++Q ++N D GQ  AL+SLQQ A+ +LQQNP
Sbjct: 1034 MQQNNVPSLQPSSMPSLSGLPNAQQNIMNSLQSSANLDSGQGNALTSLQQAAVGALQQNP 1093

Query: 2059 VSGPQSVNISSLTSQSGMNTLQSNLNSLQTNSTMLQNQH 1943
            VS PQ  NI++L+SQ+G+N LQ N+N LQ NS MLQ+QH
Sbjct: 1094 VSAPQQANINNLSSQNGVNVLQQNINQLQPNSNMLQHQH 1132



 Score =  123 bits (308), Expect = 9e-25
 Identities = 69/111 (62%), Positives = 82/111 (73%), Gaps = 2/111 (1%)
 Frame = -1

Query: 4084 SHGMQSQMHNQ--PLSMPVVSNQSQARQQLLPQNMQNSISSAGVQNSASLTSTLPAVGNL 3911
            SH MQ Q+HNQ   L +P+  NQSQ RQQLL QN+Q +I+S GV +SASL STL +V +L
Sbjct: 435  SHSMQPQVHNQGQQLPVPLAPNQSQTRQQLLAQNIQTNIAS-GVPSSASLPSTLSSVTSL 493

Query: 3910 TQASMPNVVGQNNLQNMQNISNVAQNPVGNSMGQGMPPNVFANSQRQMAGR 3758
             Q  M NVVGQN+   MQNIS + QN VGNSMGQG+P N+FANSQRQ  GR
Sbjct: 494  NQTPMQNVVGQNS--GMQNISGIPQNSVGNSMGQGVPSNMFANSQRQSQGR 542


>ref|XP_002892882.1| hypothetical protein ARALYDRAFT_471776 [Arabidopsis lyrata subsp.
            lyrata] gi|297338724|gb|EFH69141.1| hypothetical protein
            ARALYDRAFT_471776 [Arabidopsis lyrata subsp. lyrata]
          Length = 1343

 Score =  639 bits (1647), Expect = e-180
 Identities = 400/841 (47%), Positives = 500/841 (59%), Gaps = 11/841 (1%)
 Frame = -1

Query: 2824 RDMQQRLQTSGP----LLQQQNVIEQQKQLFQSQRAIPE---ASSNPTAQTGNASGGDWQ 2666
            +D+QQRLQ SG     LL  QNV++QQ+QL+QSQR +PE   +S + TAQT +A+GGDWQ
Sbjct: 539  QDVQQRLQASGQVTGSLLPPQNVVDQQRQLYQSQRTLPEMPSSSLDSTAQTESANGGDWQ 598

Query: 2665 EEVYQKIKSMKEMYYVELNEMYVKIATKLQQHESLSQQTKNEQHEKIKLFKAMLERLVQF 2486
            EEVYQKIKSMKE Y  +LNE+Y ++A KLQQ +SL QQ +++Q EK+K FK MLER++QF
Sbjct: 599  EEVYQKIKSMKETYLPDLNEIYQRVAAKLQQ-DSLPQQQRSDQFEKLKQFKTMLERMIQF 657

Query: 2485 LRMNKNDVQLAHKEKLGSVEKQIINILNSHRPRKXXXXXXXXXXXXXXXXXXXPAQISQM 2306
            L ++K+++  A K+K+   EKQII  LN HRPRK                    +Q  Q 
Sbjct: 658  LSVSKSNIMPALKDKVAYYEKQIIGFLNMHRPRKPVQQGQLPQSQMQPMQQPQ-SQTVQD 716

Query: 2305 QPHENQMNPQMQSMNVPSSVATIQQNSMSGLQQNSLSSVPAVSNAQQNMINAIQPASNPD 2126
            Q H+NQ N QMQSM++  +    QQ           SS+P + N      N +       
Sbjct: 717  QSHDNQTNQQMQSMSMQGAGPRAQQ-----------SSLPNMQN------NVLSSRPGVS 759

Query: 2125 GGQSTALSSLQQVAMNSLQQNPVSGPQSVNISSLTSQSGMNTLQSNLNSLQTNSTMLQNQ 1946
              Q    S++   ++   Q N ++  Q V          M ++Q N  S Q N++    Q
Sbjct: 760  ASQQNIPSTIPASSLELGQGNALNTGQQV---------AMGSMQQN-TSQQVNNSSASAQ 809

Query: 1945 HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPA 1766
                                                                     Q  
Sbjct: 810  SGLSTLQTNVNQPQLSSSLLQHQHLKQQQDQQMTQQFKQQFQQRQMQQQQLQARQQQQQQ 869

Query: 1765 QLPGHHMSP-LHQMTDSSDMKMRQQMGVKSGVFQQQHSTGQRAAYHHQQLKSGSPFSISS 1589
            QL     +  L QM D +D+  RQ M V  G+FQQ    GQRA Y  QQLK G+   +SS
Sbjct: 870  QLQARQQAAQLQQMNDMNDLTSRQGMNVSRGMFQQHSLQGQRATYPLQQLKPGA---VSS 926

Query: 1588 PQVLQAASPQVPQ-HPSPQIDQQNLLSSMTKAGTPLQSANSPFIMPSPSTPLAPSPMPGE 1412
            PQ+LQ ASPQ+ Q H SPQ+DQ+NL S++ K GTPLQ ANSPF++PSPSTPLAPSPM  +
Sbjct: 927  PQLLQGASPQMSQQHLSPQVDQKNL-STVNKMGTPLQPANSPFVVPSPSTPLAPSPMQVD 985

Query: 1411 SEKVNSSISSLPNAGNIGGPQTAAVSGPAQSLAIGTPGISASPLLAEFTNLDAAHGTVSS 1232
            SEK  +S  S+   GNI   Q   + G  QSLAIGTPGISASPLL EFT+ D       +
Sbjct: 986  SEKPGASSLSM---GNIARQQATGMQGVVQSLAIGTPGISASPLLQEFTSPDGNILNPLT 1042

Query: 1231 VISNKSNAVEQPFERLIKAVKSVSREALTAXXXXXXXXXXXXDRIAGSAPGNGSRAAVGE 1052
            + S K +A E P ERLI+AVKS S + L++            DRIAGSAPGNGSRA+VGE
Sbjct: 1043 ITSGKPSATELPIERLIRAVKSSSPQVLSSAVSDIGSVVSMVDRIAGSAPGNGSRASVGE 1102

Query: 1051 DLVAMTKCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVSSAGSISESARLLNGSDASEM 872
            DLVAMTKCRLQARNF TQ+G   TKKM+R T+AMP +V S  GS+ ++ +    S+ S++
Sbjct: 1103 DLVAMTKCRLQARNFMTQEGMMATKKMKRHTTAMPLSVASLGGSVGDNYKQFASSETSDL 1162

Query: 871  ESTATSSIKRPRIETSHALSEEIHEINRLLIDTVVDIC--XXXXXXXXXXXXXXXXXXTI 698
            ESTATS  K+ R ET HAL EEI EIN+ LIDTVV+I                     T 
Sbjct: 1163 ESTATSDGKKARTETEHALLEEIKEINQRLIDTVVEISDDEDAADPSEGAISSIGCEGTT 1222

Query: 697  VKCSFNAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLS 518
            V+ SF AV+LSP LK+  +S QMSPIQPLRLLVP +YPN SP LLDK PVE SKE EDLS
Sbjct: 1223 VRFSFIAVSLSPALKAHLSSTQMSPIQPLRLLVPCSYPNGSPSLLDKLPVETSKENEDLS 1282

Query: 517  IKAKSRFSISLRGLSQPMSLEEMAKTWDMCARAVISEYAQQSGGGTFSSKYGTWENCLSA 338
             KA +RF+I LR LSQPMSL+++AKTWD CARAVI EYAQQ GGGTFSSKYGTWE  ++A
Sbjct: 1283 SKAMARFNILLRSLSQPMSLKDIAKTWDACARAVICEYAQQFGGGTFSSKYGTWEKYVAA 1342

Query: 337  S 335
            S
Sbjct: 1343 S 1343



 Score =  187 bits (474), Expect = 5e-44
 Identities = 106/205 (51%), Positives = 142/205 (69%), Gaps = 2/205 (0%)
 Frame = -1

Query: 4366 MDNVDWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQQ 4187
            MD+ DWRTQL  DSRQ+IVNKIM+TLK+HLPFSG EG+ EL++IA RFEEKI++ A +Q 
Sbjct: 17   MDSGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGAVNQT 76

Query: 4186 DYLRKISLKMLTMETKSQNPMANSNA--TKNPPDAVSHGMQSQMHNQPLSMPVVSNQSQA 4013
            DYLRKIS+KMLTMETKSQN   +S +    N   ++     +Q H  P S+P  +NQSQA
Sbjct: 77   DYLRKISMKMLTMETKSQNAAGSSASIPAANNGTSIDSIPTNQGHLLPGSLP--TNQSQA 134

Query: 4012 RQQLLPQNMQNSISSAGVQNSASLTSTLPAVGNLTQASMPNVVGQNNLQNMQNISNVAQN 3833
             Q LL Q MQN+ S++G+  S +L S++P V ++T  +  +VV QN   NMQN++ + Q+
Sbjct: 135  PQPLLSQTMQNN-SASGMTGSTALPSSMPPVSSITNNNATSVVNQN--ANMQNVAGMLQD 191

Query: 3832 PVGNSMGQGMPPNVFANSQRQMAGR 3758
              G     G+  N+F+ SQRQM GR
Sbjct: 192  SSGQ---HGLSSNMFSGSQRQMLGR 213


>ref|XP_006465238.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like isoform X2 [Citrus sinensis]
          Length = 1364

 Score =  635 bits (1638), Expect = e-179
 Identities = 334/479 (69%), Positives = 378/479 (78%)
 Frame = -1

Query: 1771 PAQLPGHHMSPLHQMTDSSDMKMRQQMGVKSGVFQQQHSTGQRAAYHHQQLKSGSPFSIS 1592
            PAQLP H M  L+QM D +D+K+RQ M VK GVFQQ  ++GQR+AY HQ LK G+ FSIS
Sbjct: 900  PAQLPTHQMPQLNQMNDVNDLKIRQGMAVKPGVFQQHLTSGQRSAYSHQPLKPGAQFSIS 959

Query: 1591 SPQVLQAASPQVPQHPSPQIDQQNLLSSMTKAGTPLQSANSPFIMPSPSTPLAPSPMPGE 1412
            SPQ+LQ ASPQ+PQH SPQ+DQQNLL S+TK+GTPLQ  NSPF++PSPSTP+APSPMPG+
Sbjct: 960  SPQLLQTASPQIPQHSSPQVDQQNLLQSITKSGTPLQPVNSPFVVPSPSTPMAPSPMPGD 1019

Query: 1411 SEKVNSSISSLPNAGNIGGPQTAAVSGPAQSLAIGTPGISASPLLAEFTNLDAAHGTVSS 1232
            SEK  S ISSL NAGNIG  QT++    A SLAIGTPGISASPLLAEFT  D AHG   +
Sbjct: 1020 SEKPISGISSLSNAGNIGHQQTSSAQAAAPSLAIGTPGISASPLLAEFTGPDGAHGNALT 1079

Query: 1231 VISNKSNAVEQPFERLIKAVKSVSREALTAXXXXXXXXXXXXDRIAGSAPGNGSRAAVGE 1052
             IS K              VKS+S +AL+A            DRIAGSAPGNGSRAAVGE
Sbjct: 1080 AISIK--------------VKSMSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGE 1125

Query: 1051 DLVAMTKCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVSSAGSISESARLLNGSDASEM 872
            DLVAMTKCRLQARNF TQDG +G +KMRR TSAMP +VVSSAGS+++S + L GS+ S++
Sbjct: 1126 DLVAMTKCRLQARNFITQDGSSGPRKMRRYTSAMPLSVVSSAGSMNDSFKQLTGSETSDL 1185

Query: 871  ESTATSSIKRPRIETSHALSEEIHEINRLLIDTVVDICXXXXXXXXXXXXXXXXXXTIVK 692
            ESTATSSIKRPRIE +HAL EEI EIN+ LIDTVVDI                   T+VK
Sbjct: 1186 ESTATSSIKRPRIEANHALLEEIREINQRLIDTVVDISDEDADPTAAGSAGEGGEGTVVK 1245

Query: 691  CSFNAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIK 512
            CSF+AVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVE+SKEYEDLS+K
Sbjct: 1246 CSFSAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEISKEYEDLSVK 1305

Query: 511  AKSRFSISLRGLSQPMSLEEMAKTWDMCARAVISEYAQQSGGGTFSSKYGTWENCLSAS 335
            AKSRFSISLR LSQPMSL E+A+TWD+CAR VISEYAQQSGGG+FSSKYGTWENCLSA+
Sbjct: 1306 AKSRFSISLRSLSQPMSLGEIARTWDVCARTVISEYAQQSGGGSFSSKYGTWENCLSAA 1364



 Score =  326 bits (836), Expect = 6e-86
 Identities = 172/304 (56%), Positives = 222/304 (73%), Gaps = 10/304 (3%)
 Frame = -1

Query: 2824 RDMQQRLQTSGP----LLQQQNVIEQQKQLFQSQRAIPEASS---NPTAQTGNASGGDWQ 2666
            RDMQQRLQ SG     LLQ QNV++QQKQL+Q QRA+PE SS   + T QTG A+G DWQ
Sbjct: 540  RDMQQRLQASGQASASLLQPQNVMDQQKQLYQPQRALPETSSTSLDSTHQTGQANGVDWQ 599

Query: 2665 EEVYQKIKSMKEMYYVELNEMYVKIATKLQQHESLSQQTKNEQHEKIKLFKAMLERLVQF 2486
            EEVYQKIK+MKEMY  ELNEMY KIA KLQQH+SL QQ K++Q EK+K+FK MLER++ F
Sbjct: 600  EEVYQKIKTMKEMYLPELNEMYQKIAAKLQQHDSLPQQPKSDQLEKLKIFKTMLERIITF 659

Query: 2485 LRMNKNDVQLAHKEKLGSVEKQIINILNSHRPRKXXXXXXXXXXXXXXXXXXXP---AQI 2315
            L+++K+++    KEKLGS EKQI+N ++++RPRK                       +QI
Sbjct: 660  LQVSKSNILPGFKEKLGSYEKQIVNFISTNRPRKPVSSMQQQGQLPPTHMHSMQQQQSQI 719

Query: 2314 SQMQPHENQMNPQMQSMNVPSSVATIQQNSMSGLQQNSLSSVPAVSNAQQNMINAIQPAS 2135
            SQ QPH+NQMN Q+QSMN+  S+ T+QQN+++ +Q NS+ SV  VS +QQNM+N++QP  
Sbjct: 720  SQGQPHDNQMNSQIQSMNLAGSMVTMQQNNVTNVQHNSVPSVSGVSTSQQNMLNSVQPGP 779

Query: 2134 NPDGGQSTALSSLQQVAMNSLQQNPVSGPQSVNISSLTSQSGMNTLQSNLNSLQTNSTML 1955
            N D GQ T+LSS+ QV   SLQQN VS PQ  +I++L SQSG+N LQSN+N LQ+NS M+
Sbjct: 780  NMDSGQGTSLSSMHQVNAGSLQQNSVSAPQQASINNLPSQSGVNMLQSNINPLQSNSNMM 839

Query: 1954 QNQH 1943
            Q+QH
Sbjct: 840  QHQH 843



 Score =  261 bits (668), Expect = 2e-66
 Identities = 141/211 (66%), Positives = 168/211 (79%), Gaps = 8/211 (3%)
 Frame = -1

Query: 4366 MDNVDWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQQ 4187
            +D  DWRTQLQ DSRQRIVNKIMDTLKRHLPFSGQ+GL ELKKIA RFEEKIYTAA+SQ 
Sbjct: 17   LDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQS 76

Query: 4186 DYLRKISLKMLTMETKSQNPMANSNATKN------PPDAVSHGMQSQMHNQPLSMPV--V 4031
            DYLRKISLKML+ME+KSQN M NS  + N      PPD VS  MQ+Q+HNQ  S+P+   
Sbjct: 77   DYLRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPVS--MQNQVHNQGQSLPIPLS 134

Query: 4030 SNQSQARQQLLPQNMQNSISSAGVQNSASLTSTLPAVGNLTQASMPNVVGQNNLQNMQNI 3851
            +NQSQ RQQLL QN+QN++ SAGVQ S+ L+S LP+V  L+Q+ +P+VVGQ    NMQN+
Sbjct: 135  ANQSQVRQQLLSQNIQNNMLSAGVQGSSGLSSALPSVSGLSQSPIPSVVGQT--VNMQNM 192

Query: 3850 SNVAQNPVGNSMGQGMPPNVFANSQRQMAGR 3758
            S ++QN  GNSMGQG+P N+FANSQRQ+ GR
Sbjct: 193  SGISQNSGGNSMGQGVPSNLFANSQRQIQGR 223


>ref|XP_006427497.1| hypothetical protein CICLE_v10024717mg [Citrus clementina]
            gi|557529487|gb|ESR40737.1| hypothetical protein
            CICLE_v10024717mg [Citrus clementina]
          Length = 1369

 Score =  635 bits (1637), Expect = e-179
 Identities = 334/479 (69%), Positives = 377/479 (78%)
 Frame = -1

Query: 1771 PAQLPGHHMSPLHQMTDSSDMKMRQQMGVKSGVFQQQHSTGQRAAYHHQQLKSGSPFSIS 1592
            PAQLP H M  L+QM D +D+K+RQ M VK GVFQQ  ++GQR+AY HQ LK G+ F IS
Sbjct: 905  PAQLPTHQMPQLNQMNDVNDLKIRQGMAVKPGVFQQHLTSGQRSAYSHQPLKPGAQFPIS 964

Query: 1591 SPQVLQAASPQVPQHPSPQIDQQNLLSSMTKAGTPLQSANSPFIMPSPSTPLAPSPMPGE 1412
            SPQ+LQ ASPQ+PQH SPQ+DQQNLL S+TK+GTPLQS NSPF++PSPSTP+APSPMPG+
Sbjct: 965  SPQLLQTASPQIPQHSSPQVDQQNLLQSITKSGTPLQSVNSPFVVPSPSTPMAPSPMPGD 1024

Query: 1411 SEKVNSSISSLPNAGNIGGPQTAAVSGPAQSLAIGTPGISASPLLAEFTNLDAAHGTVSS 1232
            SEK  S ISSL NAGNIG  QT +    A SLAIGTPGISASPLLAEFT  D AHG   +
Sbjct: 1025 SEKPISGISSLSNAGNIGHQQTTSAQAAAPSLAIGTPGISASPLLAEFTGPDGAHGNALT 1084

Query: 1231 VISNKSNAVEQPFERLIKAVKSVSREALTAXXXXXXXXXXXXDRIAGSAPGNGSRAAVGE 1052
             IS K              VKS+S +AL+A            DRIAGSAPGNGSRAAVGE
Sbjct: 1085 AISIK--------------VKSMSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGE 1130

Query: 1051 DLVAMTKCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVSSAGSISESARLLNGSDASEM 872
            DLVAMTKCRLQARNF TQDG +G +KMRR TSAMP +VVSSAGS+++S + L GS+ S++
Sbjct: 1131 DLVAMTKCRLQARNFITQDGSSGPRKMRRYTSAMPLSVVSSAGSMNDSFKQLTGSETSDL 1190

Query: 871  ESTATSSIKRPRIETSHALSEEIHEINRLLIDTVVDICXXXXXXXXXXXXXXXXXXTIVK 692
            ESTATSSIKRPRIE +HAL EEI EIN+ LIDTVVDI                   T+VK
Sbjct: 1191 ESTATSSIKRPRIEANHALLEEIREINQRLIDTVVDISDEDADPTAAGSAGEGGEGTVVK 1250

Query: 691  CSFNAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIK 512
            CSF+AVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVE+SKEYEDLS+K
Sbjct: 1251 CSFSAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEISKEYEDLSVK 1310

Query: 511  AKSRFSISLRGLSQPMSLEEMAKTWDMCARAVISEYAQQSGGGTFSSKYGTWENCLSAS 335
            AKSRFSISLR LSQPMSL E+A+TWD+CAR VISEYAQQSGGG+FSSKYGTWENCLSA+
Sbjct: 1311 AKSRFSISLRSLSQPMSLGEIARTWDVCARTVISEYAQQSGGGSFSSKYGTWENCLSAA 1369



 Score =  325 bits (832), Expect = 2e-85
 Identities = 171/304 (56%), Positives = 222/304 (73%), Gaps = 10/304 (3%)
 Frame = -1

Query: 2824 RDMQQRLQTSGP----LLQQQNVIEQQKQLFQSQRAIPEASS---NPTAQTGNASGGDWQ 2666
            RDMQQRLQ SG     LLQ QNV++QQKQL+Q QRA+PE SS   + T QTG A+G DWQ
Sbjct: 545  RDMQQRLQASGQASASLLQPQNVMDQQKQLYQPQRALPETSSTSLDSTHQTGQANGVDWQ 604

Query: 2665 EEVYQKIKSMKEMYYVELNEMYVKIATKLQQHESLSQQTKNEQHEKIKLFKAMLERLVQF 2486
            EEVYQKIK+MKEMY  ELNEMY KIA KLQQH+SL QQ K++Q EK+K+FK MLER++ F
Sbjct: 605  EEVYQKIKTMKEMYLPELNEMYQKIAAKLQQHDSLPQQPKSDQLEKLKIFKTMLERIITF 664

Query: 2485 LRMNKNDVQLAHKEKLGSVEKQIINILNSHRPRKXXXXXXXXXXXXXXXXXXXP---AQI 2315
            L+++K+++    KEKLGS EKQI+N ++++RPRK                       +QI
Sbjct: 665  LQVSKSNILPGFKEKLGSYEKQIVNFISTNRPRKPVSSMQQQGQLPPTHMHSMQQQQSQI 724

Query: 2314 SQMQPHENQMNPQMQSMNVPSSVATIQQNSMSGLQQNSLSSVPAVSNAQQNMINAIQPAS 2135
            SQ QPH+NQMN Q+QSMN+  S+ T+Q N+++ +Q NS+ SV  VS +QQNM+N++QP  
Sbjct: 725  SQGQPHDNQMNSQIQSMNLAGSMVTMQPNNVTNVQHNSVPSVSGVSTSQQNMLNSVQPGP 784

Query: 2134 NPDGGQSTALSSLQQVAMNSLQQNPVSGPQSVNISSLTSQSGMNTLQSNLNSLQTNSTML 1955
            N D GQ T+LSS+ QV   SLQQN VS PQ  +I++L SQSG+N LQSN+N+LQ+NS M+
Sbjct: 785  NMDSGQGTSLSSMHQVNAGSLQQNSVSAPQQASINNLPSQSGVNMLQSNINALQSNSNMM 844

Query: 1954 QNQH 1943
            Q+QH
Sbjct: 845  QHQH 848



 Score =  259 bits (661), Expect = 1e-65
 Identities = 140/211 (66%), Positives = 167/211 (79%), Gaps = 8/211 (3%)
 Frame = -1

Query: 4366 MDNVDWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQQ 4187
            +D  DWRTQLQ DSRQRIVNKIMDTLKRHLPFSGQ+GL ELKKIA RFEEKIYTAA+SQ 
Sbjct: 17   LDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQS 76

Query: 4186 DYLRKISLKMLTMETKSQNPMANSNATKN------PPDAVSHGMQSQMHNQPLSMPV--V 4031
            DYLRKISLKML+ME+KSQN M NS  + N      PPD  S  MQ+Q+HNQ  S+P+   
Sbjct: 77   DYLRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPGS--MQNQVHNQGQSLPIPLS 134

Query: 4030 SNQSQARQQLLPQNMQNSISSAGVQNSASLTSTLPAVGNLTQASMPNVVGQNNLQNMQNI 3851
            +NQSQ RQQLL QN+QN++ SAGVQ S+ L+S LP+V  L+Q+ +P+VVGQ    NMQN+
Sbjct: 135  ANQSQVRQQLLSQNIQNNMLSAGVQGSSGLSSALPSVSGLSQSPIPSVVGQT--VNMQNM 192

Query: 3850 SNVAQNPVGNSMGQGMPPNVFANSQRQMAGR 3758
            S ++QN  GNSMGQG+P N+FANSQRQ+ GR
Sbjct: 193  SGISQNSGGNSMGQGVPSNLFANSQRQIQGR 223


>ref|XP_004974263.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like isoform X3 [Setaria italica]
          Length = 1329

 Score =  629 bits (1623), Expect = e-177
 Identities = 382/845 (45%), Positives = 505/845 (59%), Gaps = 18/845 (2%)
 Frame = -1

Query: 2818 MQQRLQTSGPLLQQQNVIEQQKQLFQSQRAIPEASSNP----TAQTGNASGGDWQEEVYQ 2651
            MQQRLQTS  +L QQN I+Q KQ  Q+QR + E SS+     TAQTG+   GD QEE+YQ
Sbjct: 512  MQQRLQTSAGMLLQQNNIDQ-KQYIQAQRGLQEVSSSTSVDSTAQTGHTGAGDLQEELYQ 570

Query: 2650 KIKSMKEMYYVELNEMYVKIATKLQQHES-LSQQTKNEQHEKIKLFKAMLERLVQFLRMN 2474
             IKS+K+ Y+ ELN++Y KI+ K+Q  ++ +  Q  ++Q+EK+K FKA+LER + FL++N
Sbjct: 571  MIKSLKDQYFAELNDLYNKISMKIQHVDNHMPAQKSSDQYEKMKNFKALLERTLHFLQVN 630

Query: 2473 KNDVQLAHKEKLGSVEKQIINILNSHR----PRKXXXXXXXXXXXXXXXXXXXPAQISQ- 2309
            K+ +Q   +EK+   E+QI+NILNS R    P                       Q SQ 
Sbjct: 631  KSSIQPGFREKIPIYERQIVNILNSQRRKPVPAPGQQQFQQPGGQASGSNISQQHQNSQG 690

Query: 2308 MQPHENQMNPQMQSMNVPSSVATIQQNSMSGLQQNSLSSVPA-------VSNAQQNMINA 2150
            +Q H++  N QM   ++PS    +Q +   G+Q      VPA       VS  QQN+ NA
Sbjct: 691  LQQHDSHTN-QMPQASLPSMSTGVQSSGAPGIQH-----VPAPQATNFGVSTTQQNVTNA 744

Query: 2149 IQPASNPDGGQSTALSSLQQVAMNSLQQNPVSGPQSVNISSLTSQSGMNTLQSNLNSLQT 1970
             Q  SN +G Q    + +Q  +M +  Q   +GP          Q  MN  Q + ++L +
Sbjct: 745  PQAGSNLEGAQGNNFNPVQHGSMGAALQQGSTGPM---------QGAMNAQQQSSSNLLS 795

Query: 1969 NSTMLQNQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1790
            N+ M   Q                                                    
Sbjct: 796  NNAMSTMQPNTNSMQANASSLQQLKQQHQEHQIMQSQQMKRQQMLHQQIHQKQLHQSQLP 855

Query: 1789 XXXXXQPAQLPGHHMSP-LHQMTDSSDMKMRQQMGVKSGVFQQQHSTGQRAAYHHQQLKS 1613
                 Q  Q  G    P LH   D +++K+RQ   +KSG++QQ    GQR  Y  QQ+K 
Sbjct: 856  IQQQLQKQQQQGQMQVPQLHSGNDMNELKVRQGAAMKSGMYQQ---LGQRNYY--QQMKQ 910

Query: 1612 GSPFSISSPQVLQAASPQVPQHPSPQIDQQNLLSSMTKAGTPLQSANSPFIMPSPSTPLA 1433
            GS F ISSPQ LQA+SPQ+  H SPQ+DQ NLL S  K GTPL SANSPF+ PSPS P+A
Sbjct: 911  GSAFPISSPQNLQASSPQISHH-SPQVDQHNLLQSQIKTGTPLHSANSPFV-PSPSPPVA 968

Query: 1432 PSPMPGESEKVNSSISSLPNAGNIGGPQTAAVSGPAQSLAIGTPGISASPLLAEFTNLDA 1253
            PSP+P +S+K  S++SSL + G  G  QT+ ++  +QS+A+ TPGISASPLLAEFT+ D 
Sbjct: 969  PSPIPVDSDKPLSNLSSLTSTGQAGHQQTS-LAHQSQSIAVNTPGISASPLLAEFTSADG 1027

Query: 1252 AHGTVSSVISNKSNAVEQPFERLIKAVKSVSREALTAXXXXXXXXXXXXDRIAGSAPGNG 1073
            +   V + +  KSNA E+P +RL+KA+++  R++LTA            DRIAGSAPGNG
Sbjct: 1028 SQANVPTQVPTKSNAAERPLDRLLKALRTTQRQSLTAAVSDIGSVVSMIDRIAGSAPGNG 1087

Query: 1072 SRAAVGEDLVAMTKCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVSSAGSISESARLLN 893
            SRAAVGEDLVAMTKCRLQARNF T DG   +KKM+R TSAMP NV SS GS+++S +   
Sbjct: 1088 SRAAVGEDLVAMTKCRLQARNFITHDGSGTSKKMKRDTSAMPLNV-SSPGSVNDSLKQSY 1146

Query: 892  GSDASEMESTATSSIKRPRIETSHALSEEIHEINRLLIDTVVDICXXXXXXXXXXXXXXX 713
              D  E++STATS +K  + E +HAL EEI EIN+ LIDT + +                
Sbjct: 1147 SMDTPELQSTATSRVKWQKAEVNHALMEEIQEINQQLIDTELHVSEDDAESFAATSEGAE 1206

Query: 712  XXXTIVKCSFNAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKE 533
                +++C+F AVA+SP+LKS +ASAQMSPI PLRLLVP +YP CSP+LLDKFP E S+ 
Sbjct: 1207 GM--VIRCTFTAVAVSPSLKSMFASAQMSPILPLRLLVPASYPKCSPVLLDKFPDEQSRN 1264

Query: 532  YEDLSIKAKSRFSISLRGLSQPMSLEEMAKTWDMCARAVISEYAQQSGGGTFSSKYGTWE 353
             +DLS KAKS+F I LRGL++PMSL E+A+TWD CAR VI+EYAQQ+GGG+FSS YG WE
Sbjct: 1265 SDDLSTKAKSKFGILLRGLAEPMSLREIARTWDACARKVIAEYAQQTGGGSFSSSYGCWE 1324

Query: 352  NCLSA 338
            +C+ A
Sbjct: 1325 SCVGA 1329



 Score =  152 bits (385), Expect = 1e-33
 Identities = 99/204 (48%), Positives = 128/204 (62%), Gaps = 5/204 (2%)
 Frame = -1

Query: 4354 DWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQQDYLR 4175
            DWRTQLQ ++R RIVNKIM+TLK+HLP S  EGL EL+KIAVRFEEKIYTAAT+Q DYLR
Sbjct: 35   DWRTQLQPEARSRIVNKIMETLKKHLPVSVPEGLSELQKIAVRFEEKIYTAATNQSDYLR 94

Query: 4174 KISLKMLTME--TKSQNPMANSNATKNP-PDAVSHGMQSQMHN--QPLSMPVVSNQSQAR 4010
            KISLKML+ME  TK+Q    N+    N  P   + G+  Q  N  Q  ++P++S Q Q R
Sbjct: 95   KISLKMLSMESQTKTQQNPGNAQVIPNQNPPGPAPGLPPQGSNPAQSSAIPLMS-QQQTR 153

Query: 4009 QQLLPQNMQNSISSAGVQNSASLTSTLPAVGNLTQASMPNVVGQNNLQNMQNISNVAQNP 3830
            Q                  SAS+  +LP++G     S+P V   + LQNM   S + QN 
Sbjct: 154  QP---------------NASASVQGSLPSIGQ----SLPGVSQTSTLQNM---SGMPQNT 191

Query: 3829 VGNSMGQGMPPNVFANSQRQMAGR 3758
            + + + QG P +++A +QRQMAGR
Sbjct: 192  MNSGLAQGAPQDMYA-AQRQMAGR 214


>gb|EEC84047.1| hypothetical protein OsI_30310 [Oryza sativa Indica Group]
          Length = 1217

 Score =  624 bits (1610), Expect = e-175
 Identities = 377/843 (44%), Positives = 509/843 (60%), Gaps = 16/843 (1%)
 Frame = -1

Query: 2818 MQQRLQTSGPLLQQQNVIEQQKQLFQSQRAIPEASSNP----TAQTGNASGG--DWQEEV 2657
            MQQRLQTS  +L QQN I+QQKQ  Q+QR + E SS+     TAQTG+   G  DWQEE 
Sbjct: 398  MQQRLQTSAGMLLQQNNIDQQKQFMQAQRGLQEVSSSTSVDSTAQTGHTGTGTGDWQEEA 457

Query: 2656 YQKIKSMKEMYYVELNEMYVKIATKLQQHESL-SQQTKNEQHEKIKLFKAMLERLVQFLR 2480
            YQ +K++K+ Y+ ELN++Y KI+ KLQ  +++   Q   +Q+EK+K FK MLER +  L+
Sbjct: 458  YQMVKNLKDQYFPELNDLYNKISLKLQHVDNMVPPQKPTDQYEKMKSFKLMLERTMHVLQ 517

Query: 2479 MNKNDVQLAHKEKLGSVEKQIINILNSHRPRKXXXXXXXXXXXXXXXXXXXPAQISQ--- 2309
            +NK ++Q A ++K+ + E+QIINILNS +  +                     Q  Q   
Sbjct: 518  LNKGNIQPALRDKIPAYERQIINILNSQKRPRVQGQQTQFQQSAGQGPTSNIPQQQQPSQ 577

Query: 2308 -MQPHENQMNPQMQSMNVPSSVATIQQNSMSGLQQNSLSSVPA----VSNAQQNMINAIQ 2144
             +Q H+N  N QM   ++PS    +Q +  +G+Q   L + PA    V   QQN+ NA Q
Sbjct: 578  GLQQHDNHTN-QMPQASMPSMSTGLQSSGAAGIQH--LPASPATNFGVPATQQNVTNAPQ 634

Query: 2143 PASNPDGGQSTALSSLQQVAMNSLQQNPVSGPQSVNISSLTSQSGMNTLQSNLNSLQTNS 1964
              SN +  Q +  +SLQ  +M+   Q   +GP    +++    S      S++ S  +  
Sbjct: 635  ATSNLEVTQGSNFNSLQHGSMSGALQQGSTGPMQGTLNAQQQAS------SSMLSHNSVG 688

Query: 1963 TMLQNQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1784
            TM  N +                                                     
Sbjct: 689  TMQANANSMQANANSLQQLKQQQQEHHMMQNQQMKRQMFQQFQQKQMLQQQLPAQQQLQK 748

Query: 1783 XXXQPAQLPGHHMSPLHQMTDSSDMKMRQQMGVKSGVFQQQHSTGQRAAYHHQQLKSGSP 1604
                  Q+P HH        D++++K+RQ   +K G++QQ     QR  +++QQ+K GS 
Sbjct: 749  QQQSQMQVPQHHSG-----NDANELKVRQGAAMKPGIYQQH--LAQRNNFYNQQIKQGSA 801

Query: 1603 FSISSPQVLQAASPQVPQHPSPQIDQQNLLSSMTKAGTPLQSANSPFIMPSPSTPLAPSP 1424
            F ISSPQ LQA+SPQ+  H SPQ+DQ NLL S  K GTPLQSANSP+ MPSPS P+APSP
Sbjct: 802  FPISSPQNLQASSPQISHH-SPQVDQHNLLPSQVKTGTPLQSANSPY-MPSPSPPVAPSP 859

Query: 1423 MPGESEKVNSSISS-LPNAGNIGGPQTAAVSGPAQSLAIGTPGISASPLLAEFTNLDAAH 1247
            +P +SEK  S++SS L N G     QT  ++  +QS+A+ TPGISASPLLAEFT++D   
Sbjct: 860  IPVDSEKPLSNLSSSLTNTGQATHQQTN-MAPQSQSIAVNTPGISASPLLAEFTSVDGNQ 918

Query: 1246 GTVSSVISNKSNAVEQPFERLIKAVKSVSREALTAXXXXXXXXXXXXDRIAGSAPGNGSR 1067
              + + + NKS+A E+P +RL+KA+++  R++L+A            DRIAGSAPGNGSR
Sbjct: 919  ANMPTQVLNKSSAAERPLDRLLKALRTTQRQSLSAAVSDIGSVVSMIDRIAGSAPGNGSR 978

Query: 1066 AAVGEDLVAMTKCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVSSAGSISESARLLNGS 887
            AAVGEDLVAMTKCRLQARNF T DG   +KKM+R TSAMP N VSSAGS+++S +     
Sbjct: 979  AAVGEDLVAMTKCRLQARNFITHDGTGTSKKMKRDTSAMPLN-VSSAGSVNDSLKQTFSI 1037

Query: 886  DASEMESTATSSIKRPRIETSHALSEEIHEINRLLIDTVVDICXXXXXXXXXXXXXXXXX 707
               E++STATS +K  + E +HAL EEIHEIN+ LIDT + +C                 
Sbjct: 1038 GTPELQSTATSRVKWQKTEINHALMEEIHEINQQLIDTELHVC--EDDAESFGATSEGTE 1095

Query: 706  XTIVKCSFNAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYE 527
             T++KC+F AVA+SP+LKS +ASAQMSPI PLR+LVP +YP CSP+LLDKFP E  +  +
Sbjct: 1096 GTVIKCTFTAVAVSPSLKSMFASAQMSPILPLRVLVPASYPKCSPVLLDKFPDE-QRNSD 1154

Query: 526  DLSIKAKSRFSISLRGLSQPMSLEEMAKTWDMCARAVISEYAQQSGGGTFSSKYGTWENC 347
            DLS KA+S+FSI LRGL++PMSL E+A+TWD CAR VI+EYAQQ+GGG+FSS YG WENC
Sbjct: 1155 DLSTKARSKFSILLRGLAEPMSLREIARTWDACARKVIAEYAQQTGGGSFSSSYGCWENC 1214

Query: 346  LSA 338
            + A
Sbjct: 1215 VGA 1217


>ref|XP_004974264.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like isoform X4 [Setaria italica]
          Length = 1328

 Score =  624 bits (1609), Expect = e-175
 Identities = 381/845 (45%), Positives = 504/845 (59%), Gaps = 18/845 (2%)
 Frame = -1

Query: 2818 MQQRLQTSGPLLQQQNVIEQQKQLFQSQRAIPEASSNP----TAQTGNASGGDWQEEVYQ 2651
            MQQRLQTS  +L QQN I+Q KQ  Q+QR + E SS+     TAQTG+   GD QEE+YQ
Sbjct: 512  MQQRLQTSAGMLLQQNNIDQ-KQYIQAQRGLQEVSSSTSVDSTAQTGHTGAGDLQEELYQ 570

Query: 2650 KIKSMKEMYYVELNEMYVKIATKLQQHES-LSQQTKNEQHEKIKLFKAMLERLVQFLRMN 2474
             IKS+K+ Y+ ELN++Y KI+ K+Q  ++ +  Q  ++Q+EK+K FKA+LER + FL++N
Sbjct: 571  MIKSLKDQYFAELNDLYNKISMKIQHVDNHMPAQKSSDQYEKMKNFKALLERTLHFLQVN 630

Query: 2473 KNDVQLAHKEKLGSVEKQIINILNSHR----PRKXXXXXXXXXXXXXXXXXXXPAQISQ- 2309
            K+ +Q   +EK+   E+QI+NILNS R    P                       Q SQ 
Sbjct: 631  KSSIQPGFREKIPIYERQIVNILNSQRRKPVPAPGQQQFQQPGGQASGSNISQQHQNSQG 690

Query: 2308 MQPHENQMNPQMQSMNVPSSVATIQQNSMSGLQQNSLSSVPA-------VSNAQQNMINA 2150
            +Q H++  N QM   ++PS    +Q +   G+Q      VPA       VS  QQN+ NA
Sbjct: 691  LQQHDSHTN-QMPQASLPSMSTGVQSSGAPGIQH-----VPAPQATNFGVSTTQQNVTNA 744

Query: 2149 IQPASNPDGGQSTALSSLQQVAMNSLQQNPVSGPQSVNISSLTSQSGMNTLQSNLNSLQT 1970
             Q  SN +G Q    + +Q  +M +  Q   +GP          Q  MN  Q + ++L +
Sbjct: 745  PQAGSNLEGAQGNNFNPVQHGSMGAALQQGSTGPM---------QGAMNAQQQSSSNLLS 795

Query: 1969 NSTMLQNQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1790
            N+ M   Q                                                    
Sbjct: 796  NNAMSTMQPNTNSMQANASSLQQLKQQHQEHQIMQSQQMKRQQMLHQQIHQKQLHQSQLP 855

Query: 1789 XXXXXQPAQLPGHHMSP-LHQMTDSSDMKMRQQMGVKSGVFQQQHSTGQRAAYHHQQLKS 1613
                 Q  Q  G    P LH   D +++K+RQ   +KSG++QQ    GQR  Y  QQ+K 
Sbjct: 856  IQQQLQKQQQQGQMQVPQLHSGNDMNELKVRQGAAMKSGMYQQ---LGQRNYY--QQMKQ 910

Query: 1612 GSPFSISSPQVLQAASPQVPQHPSPQIDQQNLLSSMTKAGTPLQSANSPFIMPSPSTPLA 1433
            GS F ISSPQ LQA+SPQ+  H SPQ+DQ NLL S  K GTPL SANSPF+ PSPS P+A
Sbjct: 911  GSAFPISSPQNLQASSPQISHH-SPQVDQHNLLQSQIKTGTPLHSANSPFV-PSPSPPVA 968

Query: 1432 PSPMPGESEKVNSSISSLPNAGNIGGPQTAAVSGPAQSLAIGTPGISASPLLAEFTNLDA 1253
            PSP+P +S+K  S++SSL + G  G  QT+ ++  +QS+A+ TPGISASPLLAEFT+ D 
Sbjct: 969  PSPIPVDSDKPLSNLSSLTSTGQAGHQQTS-LAHQSQSIAVNTPGISASPLLAEFTSADG 1027

Query: 1252 AHGTVSSVISNKSNAVEQPFERLIKAVKSVSREALTAXXXXXXXXXXXXDRIAGSAPGNG 1073
            +   V + +  KSNA E+P +RL+KA+++  R++LTA            DRIAGSAPGNG
Sbjct: 1028 SQANVPTQVPTKSNAAERPLDRLLKALRTTQRQSLTAAVSDIGSVVSMIDRIAGSAPGNG 1087

Query: 1072 SRAAVGEDLVAMTKCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVSSAGSISESARLLN 893
            SRAAVGEDLVAMTKCRLQARNF T DG   +KKM+R TSAMP N VSS GS+++S +   
Sbjct: 1088 SRAAVGEDLVAMTKCRLQARNFITHDGSGTSKKMKRDTSAMPLN-VSSPGSVNDSLKQSY 1146

Query: 892  GSDASEMESTATSSIKRPRIETSHALSEEIHEINRLLIDTVVDICXXXXXXXXXXXXXXX 713
              D  E++STATS +K  + E +HAL EEI EIN+ LIDT + +                
Sbjct: 1147 SMDTPELQSTATSRVKWQKAEVNHALMEEIQEINQQLIDTELHV--SEDDAESFAATSEG 1204

Query: 712  XXXTIVKCSFNAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKE 533
                +++C+F AVA+SP+LKS +ASAQMSPI PLRLLVP +YP CSP+LLDKFP E  + 
Sbjct: 1205 AEGMVIRCTFTAVAVSPSLKSMFASAQMSPILPLRLLVPASYPKCSPVLLDKFPDE-QRN 1263

Query: 532  YEDLSIKAKSRFSISLRGLSQPMSLEEMAKTWDMCARAVISEYAQQSGGGTFSSKYGTWE 353
             +DLS KAKS+F I LRGL++PMSL E+A+TWD CAR VI+EYAQQ+GGG+FSS YG WE
Sbjct: 1264 SDDLSTKAKSKFGILLRGLAEPMSLREIARTWDACARKVIAEYAQQTGGGSFSSSYGCWE 1323

Query: 352  NCLSA 338
            +C+ A
Sbjct: 1324 SCVGA 1328



 Score =  152 bits (385), Expect = 1e-33
 Identities = 99/204 (48%), Positives = 128/204 (62%), Gaps = 5/204 (2%)
 Frame = -1

Query: 4354 DWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQQDYLR 4175
            DWRTQLQ ++R RIVNKIM+TLK+HLP S  EGL EL+KIAVRFEEKIYTAAT+Q DYLR
Sbjct: 35   DWRTQLQPEARSRIVNKIMETLKKHLPVSVPEGLSELQKIAVRFEEKIYTAATNQSDYLR 94

Query: 4174 KISLKMLTME--TKSQNPMANSNATKNP-PDAVSHGMQSQMHN--QPLSMPVVSNQSQAR 4010
            KISLKML+ME  TK+Q    N+    N  P   + G+  Q  N  Q  ++P++S Q Q R
Sbjct: 95   KISLKMLSMESQTKTQQNPGNAQVIPNQNPPGPAPGLPPQGSNPAQSSAIPLMS-QQQTR 153

Query: 4009 QQLLPQNMQNSISSAGVQNSASLTSTLPAVGNLTQASMPNVVGQNNLQNMQNISNVAQNP 3830
            Q                  SAS+  +LP++G     S+P V   + LQNM   S + QN 
Sbjct: 154  QP---------------NASASVQGSLPSIGQ----SLPGVSQTSTLQNM---SGMPQNT 191

Query: 3829 VGNSMGQGMPPNVFANSQRQMAGR 3758
            + + + QG P +++A +QRQMAGR
Sbjct: 192  MNSGLAQGAPQDMYA-AQRQMAGR 214


>ref|NP_001062533.1| Os08g0564800 [Oryza sativa Japonica Group]
            gi|42409072|dbj|BAD10323.1| putative CTV.22 [Oryza sativa
            Japonica Group] gi|45735914|dbj|BAD12946.1| putative
            CTV.22 [Oryza sativa Japonica Group]
            gi|113624502|dbj|BAF24447.1| Os08g0564800 [Oryza sativa
            Japonica Group] gi|215700965|dbj|BAG92389.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|222641028|gb|EEE69160.1| hypothetical protein
            OsJ_28313 [Oryza sativa Japonica Group]
          Length = 1320

 Score =  621 bits (1601), Expect = e-174
 Identities = 376/843 (44%), Positives = 508/843 (60%), Gaps = 16/843 (1%)
 Frame = -1

Query: 2818 MQQRLQTSGPLLQQQNVIEQQKQLFQSQRAIPEASSNP----TAQTGNASGG--DWQEEV 2657
            MQQRLQTS  +L QQN I+QQKQ  Q+QR + E SS+     TAQTG+   G  DWQEE 
Sbjct: 501  MQQRLQTSAGMLLQQNNIDQQKQFMQAQRGLQEVSSSTSVDSTAQTGHTGTGTGDWQEEA 560

Query: 2656 YQKIKSMKEMYYVELNEMYVKIATKLQQHESL-SQQTKNEQHEKIKLFKAMLERLVQFLR 2480
            YQ +K++K+ Y+ ELN++Y KI+ KLQ  +++   Q   EQ+EK+K FK MLER +  L+
Sbjct: 561  YQMVKNLKDQYFPELNDLYNKISLKLQHVDNMVPPQKPTEQYEKMKNFKLMLERTMHVLQ 620

Query: 2479 MNKNDVQLAHKEKLGSVEKQIINILNSHRPRKXXXXXXXXXXXXXXXXXXXPAQISQ--- 2309
            +NK ++Q A ++K+ + E+QII+ILNS +  +                     Q  Q   
Sbjct: 621  LNKGNIQPALRDKIPAYERQIISILNSQKRPRVQGQQTQFQQSAGQGPTSNIPQQQQPSQ 680

Query: 2308 -MQPHENQMNPQMQSMNVPSSVATIQQNSMSGLQQNSLSSVPA----VSNAQQNMINAIQ 2144
             +Q H+N  N QM   ++PS    +Q +  +G+Q   L + PA    V   QQN+ NA Q
Sbjct: 681  GLQQHDNHTN-QMPQASMPSMSTGLQSSGAAGIQH--LPASPATNFGVPATQQNVTNAPQ 737

Query: 2143 PASNPDGGQSTALSSLQQVAMNSLQQNPVSGPQSVNISSLTSQSGMNTLQSNLNSLQTNS 1964
              SN +  Q +  +SLQ  +M+   Q   +GP    +++    S      S++ S  +  
Sbjct: 738  ATSNLEVTQGSNFNSLQHGSMSGALQQGSTGPMQGTLNAQQQAS------SSMLSHNSVG 791

Query: 1963 TMLQNQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1784
            TM  N +                                                     
Sbjct: 792  TMQANANSMQANANSLQQLKQQQQEHHMMQNQQMKRQMFQQFQQKQMLQQQLPAQQQLQK 851

Query: 1783 XXXQPAQLPGHHMSPLHQMTDSSDMKMRQQMGVKSGVFQQQHSTGQRAAYHHQQLKSGSP 1604
                  Q+P HH        D++++K+RQ   +K G++QQ     QR  +++QQ+K GS 
Sbjct: 852  QQQSQMQVPQHHSG-----NDANELKVRQGAAMKPGIYQQH--LAQRNNFYNQQMKQGSA 904

Query: 1603 FSISSPQVLQAASPQVPQHPSPQIDQQNLLSSMTKAGTPLQSANSPFIMPSPSTPLAPSP 1424
            F ISSPQ LQA+SPQ+  H SPQ+DQ NLL S  K GTPLQSANSP+ MPSPS P+APSP
Sbjct: 905  FPISSPQNLQASSPQISHH-SPQVDQHNLLPSQVKTGTPLQSANSPY-MPSPSPPVAPSP 962

Query: 1423 MPGESEKVNSSISS-LPNAGNIGGPQTAAVSGPAQSLAIGTPGISASPLLAEFTNLDAAH 1247
            +P +SEK  S++SS L N G     QT  ++  +QS+A+ TPGISASPLLAEFT++D   
Sbjct: 963  IPVDSEKPLSNLSSSLTNTGQATHQQTN-MAPQSQSIAVNTPGISASPLLAEFTSVDGNQ 1021

Query: 1246 GTVSSVISNKSNAVEQPFERLIKAVKSVSREALTAXXXXXXXXXXXXDRIAGSAPGNGSR 1067
              + + +  KS+A E+P +RL+KA+++  R++L+A            DRIAGSAPGNGSR
Sbjct: 1022 ANMPTQVLTKSSAAERPLDRLLKALRTTQRQSLSAAVSDIGSVVSMIDRIAGSAPGNGSR 1081

Query: 1066 AAVGEDLVAMTKCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVSSAGSISESARLLNGS 887
            AAVGEDLVAMTKCRLQARNF T DG   +KKM+R TSAMP N VSSAGS+++S +     
Sbjct: 1082 AAVGEDLVAMTKCRLQARNFITHDGTGTSKKMKRDTSAMPLN-VSSAGSVNDSLKQTFSI 1140

Query: 886  DASEMESTATSSIKRPRIETSHALSEEIHEINRLLIDTVVDICXXXXXXXXXXXXXXXXX 707
               E++STATS +K  + E +HAL EEIHEIN+ LIDT + +C                 
Sbjct: 1141 GTPELQSTATSRVKWQKTEINHALMEEIHEINQQLIDTELHVC--EDDAESFGATSEGTE 1198

Query: 706  XTIVKCSFNAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYE 527
             T++KC+F AVA+SP+LKS +ASAQMSPI PLR+LVP +YP CSP+LLDKFP E  +  +
Sbjct: 1199 GTVIKCTFTAVAVSPSLKSMFASAQMSPILPLRVLVPASYPKCSPVLLDKFPDE-QRNSD 1257

Query: 526  DLSIKAKSRFSISLRGLSQPMSLEEMAKTWDMCARAVISEYAQQSGGGTFSSKYGTWENC 347
            DLS KA+S+FSI LRGL++PMSL E+A+TWD CAR VI+EYAQQ+GGG+FSS YG WENC
Sbjct: 1258 DLSTKARSKFSILLRGLAEPMSLREIARTWDACARKVIAEYAQQTGGGSFSSSYGCWENC 1317

Query: 346  LSA 338
            + A
Sbjct: 1318 VGA 1320



 Score =  164 bits (416), Expect = 3e-37
 Identities = 99/201 (49%), Positives = 127/201 (63%), Gaps = 2/201 (0%)
 Frame = -1

Query: 4354 DWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQQDYLR 4175
            DWR+QLQ+++R RIVNKIMDTLK+HLP S  EGL EL+KIAVRFEEKIYTAATSQ DYLR
Sbjct: 36   DWRSQLQSEARNRIVNKIMDTLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATSQSDYLR 95

Query: 4174 KISLKMLTMETKSQNPMANSNA--TKNPPDAVSHGMQSQMHNQPLSMPVVSNQSQARQQL 4001
            KISLKML+METK+Q    N+     +NPP +V    Q     Q  ++P++S Q QARQ  
Sbjct: 96   KISLKMLSMETKTQQNPGNAQVIQNQNPPGSVPGLPQGSNPTQSSAIPLMS-QQQARQ-- 152

Query: 4000 LPQNMQNSISSAGVQNSASLTSTLPAVGNLTQASMPNVVGQNNLQNMQNISNVAQNPVGN 3821
                           NS S+ S+L  +G        N+ G N    +QN+S + QN + N
Sbjct: 153  --------------PNSTSVQSSLTNLGQ-------NLPGVNQTSTLQNMSGMPQNTMNN 191

Query: 3820 SMGQGMPPNVFANSQRQMAGR 3758
             + QG   +++A +QRQMAGR
Sbjct: 192  GLAQGASQDIYA-TQRQMAGR 211