BLASTX nr result
ID: Catharanthus23_contig00000951
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00000951
(643 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 164 3e-38
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 163 3e-38
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 162 6e-38
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 162 6e-38
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 162 8e-38
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 159 9e-37
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 159 9e-37
emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera] 159 9e-37
gb|AFB73911.1| polyprotein [Citrus sinensis] 158 1e-36
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 158 1e-36
gb|AFB73912.1| polyprotein [Citrus sinensis] 155 7e-36
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 155 9e-36
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 154 2e-35
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 152 6e-35
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 152 6e-35
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 152 6e-35
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 152 8e-35
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 152 8e-35
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 152 1e-34
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 152 1e-34
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 164 bits (414), Expect = 3e-38
Identities = 87/215 (40%), Positives = 129/215 (60%), Gaps = 2/215 (0%)
Frame = +1
Query: 1 MKNKCFKRIKEEKQRKQGKGSDKNDKTHDFESDGNSMYXXXXXXXXXXXXXXXHWILDSG 180
+K +C+ IK+ + K + S DG +Y WI+DSG
Sbjct: 239 VKKECWN-IKKNGE-KNSEASTSQGCVASTSDDGEILYSEAATSSKGERRLNDVWIMDSG 296
Query: 181 CTFHMTPNKHWFSDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*VRYVPNL 360
T+HMTP++ WF ++P+ G V+MGN+H EI G+G + +KMHDG RK+ VR+V L
Sbjct: 297 ATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGL 356
Query: 361 RRNLISLGVFDTNGFSYKSENGIMKVCKGALVMLKGFK-KDGLYHLIGKTVCEASALVSK 537
++NL+S+G D G +E+GI+KV KG LV++K K LY L+G T+ EA A V+
Sbjct: 357 KKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLLGDTLQEADASVAA 416
Query: 538 SVPEK-TLLWHRRIGHISEKGLHCLQKQNLLGGDK 639
S E+ T++WH+R+GH+SE+GL L ++NLL G K
Sbjct: 417 SSQEETTMMWHQRLGHMSERGLKVLAERNLLHGLK 451
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 163 bits (413), Expect = 3e-38
Identities = 86/215 (40%), Positives = 126/215 (58%), Gaps = 2/215 (0%)
Frame = +1
Query: 1 MKNKCFKRIKEEKQRKQGKGSDKNDKTHDFESDGNSMYXXXXXXXXXXXXXXXHWILDSG 180
+K +C+ K + K + + DG +Y WI+DSG
Sbjct: 239 VKKECWNNKKNGE--KNSEATTSQGCVASTSDDGEILYSEAATSSEGERQLNDVWIMDSG 296
Query: 181 CTFHMTPNKHWFSDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*VRYVPNL 360
T+HMTP++ WF ++P+ G V+MGN+H EI G+G + +KMHDG RK+ VR+V L
Sbjct: 297 ATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGL 356
Query: 361 RRNLISLGVFDTNGFSYKSENGIMKVCKGALVMLKGFK-KDGLYHLIGKTVCEASALV-S 534
++NL+S+G D G SE+GI+KV KG LV++K K LY L+G T+ EA A V +
Sbjct: 357 KKNLLSVGQLDDLGCKIHSESGILKVVKGNLVVMKAEKITSNLYMLLGDTLQEADASVAA 416
Query: 535 KSVPEKTLLWHRRIGHISEKGLHCLQKQNLLGGDK 639
S E T++WH+R+GH+SE+GL L ++NLL G K
Sbjct: 417 ASQEETTMMWHQRLGHMSERGLKVLVERNLLHGLK 451
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 162 bits (411), Expect = 6e-38
Identities = 87/215 (40%), Positives = 128/215 (59%), Gaps = 2/215 (0%)
Frame = +1
Query: 1 MKNKCFKRIKEEKQRKQGKGSDKNDKTHDFESDGNSMYXXXXXXXXXXXXXXXHWILDSG 180
+K +C+ IK+ + K + S DG +Y WI+DSG
Sbjct: 239 VKKECWN-IKKNGE-KNSEASTSQGCVASTSDDGEILYSEAATSSKGERRLNDVWIMDSG 296
Query: 181 CTFHMTPNKHWFSDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*VRYVPNL 360
T+HMTP++ WF ++P+ G V+MGN+H EI G+G + +KMHDG RK+ VR+V L
Sbjct: 297 ATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGL 356
Query: 361 RRNLISLGVFDTNGFSYKSENGIMKVCKGALVMLKGFK-KDGLYHLIGKTVCEASALV-S 534
++NL+S+G D G +E+GI+KV KG LV++K K LY L+G T+ EA A V +
Sbjct: 357 KKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLLGDTLQEADASVAA 416
Query: 535 KSVPEKTLLWHRRIGHISEKGLHCLQKQNLLGGDK 639
S E T++WH+R+GH+SE+GL L ++NLL G K
Sbjct: 417 ASQEETTMMWHQRLGHMSERGLKVLVERNLLHGLK 451
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 162 bits (411), Expect = 6e-38
Identities = 87/215 (40%), Positives = 128/215 (59%), Gaps = 2/215 (0%)
Frame = +1
Query: 1 MKNKCFKRIKEEKQRKQGKGSDKNDKTHDFESDGNSMYXXXXXXXXXXXXXXXHWILDSG 180
+K +C+ IK+ + K + S DG +Y WI+DSG
Sbjct: 239 VKKECWN-IKKNGE-KNSEASTSQGCVASTSDDGEILYSEAATSSKGERRLNDVWIMDSG 296
Query: 181 CTFHMTPNKHWFSDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*VRYVPNL 360
T+HMTP++ WF ++P+ G V+MGN+H EI G+G + +KMHDG RK+ VR+V L
Sbjct: 297 ATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGL 356
Query: 361 RRNLISLGVFDTNGFSYKSENGIMKVCKGALVMLKGFK-KDGLYHLIGKTVCEASALV-S 534
++NL+S+G D G +E+GI+KV KG LV++K K LY L+G T+ EA A V +
Sbjct: 357 KKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLLGDTLQEADASVAA 416
Query: 535 KSVPEKTLLWHRRIGHISEKGLHCLQKQNLLGGDK 639
S E T++WH+R+GH+SE+GL L ++NLL G K
Sbjct: 417 ASQEETTMMWHQRLGHMSERGLKVLVERNLLHGLK 451
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 162 bits (410), Expect = 8e-38
Identities = 86/209 (41%), Positives = 123/209 (58%), Gaps = 1/209 (0%)
Frame = +1
Query: 4 KNKCFKRIKEEKQRKQGKGSDKNDKTHDFESDGNSMYXXXXXXXXXXXXXXXH-WILDSG 180
K +C+K I+ K ++QG + ++ E+ +M + W+LD+G
Sbjct: 231 KKQCYKWIERNKSKQQGSDNGESSLAKSTEAFNPAMVLLATDETLVVTDSIANEWVLDTG 290
Query: 181 CTFHMTPNKHWFSDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*VRYVPNL 360
C+FHMTP K WF DFK L G V MGN+ +KGIG++ I+ DG LT VRY+PN+
Sbjct: 291 CSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKGIGSIKIRNSDGSQVILTDVRYMPNM 350
Query: 361 RRNLISLGVFDTNGFSYKSENGIMKVCKGALVMLKGFKKDGLYHLIGKTVCEASALVSKS 540
RNLISLG + G +KS++GI+K+ KG +LKG K+D LY L G T E + S
Sbjct: 351 TRNLISLGTLEDRGCWFKSQDGILKIVKGCSTILKGQKRDTLYILDGVTE-EGESHSSAE 409
Query: 541 VPEKTLLWHRRIGHISEKGLHCLQKQNLL 627
V ++T LWH R+GH+S+KG+ L K+ L
Sbjct: 410 VKDETALWHSRLGHMSQKGMEILVKKGCL 438
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 159 bits (401), Expect = 9e-37
Identities = 84/203 (41%), Positives = 117/203 (57%), Gaps = 1/203 (0%)
Frame = +1
Query: 37 KQRKQGKGSDKNDKTHDFESDGNSMYXXXXXXXXXXXXXXXHWILDSGCTFHMTPNKHWF 216
KQ +QGK + D D E W+LD+GCT+HM PN+ WF
Sbjct: 209 KQEEQGKAAVATDNKPDAE---------LLVAYAGCVQTSDEWLLDTGCTYHMCPNRDWF 259
Query: 217 SDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*VRYVPNLRRNLISLGVFDT 396
+ ++P++ G V MG+N C++ G+G + IKM DG R L+ VR++P+L+RNLISL D
Sbjct: 260 TTYEPVQGGNVLMGDNTPCKVAGVGTIQIKMFDGCIRTLSDVRHIPSLKRNLISLSTLDR 319
Query: 397 NGFSYKSENGIMKVCKGALVMLKG-FKKDGLYHLIGKTVCEASALVSKSVPEKTLLWHRR 573
G+ Y +GI+KV KG+LV++K K LYHL G T+ A V+ S+ LWH R
Sbjct: 320 KGYRYSGGDGILKVTKGSLVVMKADIKNADLYHLQGTTIVGNVAAVTDSLSNSD-LWHMR 378
Query: 574 IGHISEKGLHCLQKQNLLGGDKI 642
+GH+SE GL L K+ LL G I
Sbjct: 379 LGHMSEIGLAELSKRGLLDGQNI 401
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 159 bits (401), Expect = 9e-37
Identities = 80/162 (49%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Frame = +1
Query: 163 WILDSGCTFHMTPNKHWFSDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*V 342
WILDSGCT+HM P + WF +F+ L+ G V+MGN++ C+ GIG++ ++ HDG TR L V
Sbjct: 225 WILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDV 284
Query: 343 RYVPNLRRNLISLGVFDTNGFSYKSENGIMKVCKGALVMLKGFKKDGLYHLIGKTV---C 513
RYVP L++NLISLG ++ G +GI+K GALVMLKG K+ LY+ G TV
Sbjct: 285 RYVPKLKKNLISLGALESKGLVVTMRDGILKATSGALVMLKGVMKNNLYYYQGSTVVGTV 344
Query: 514 EASALVSKSVPEKTLLWHRRIGHISEKGLHCLQKQNLLGGDK 639
A+ SK E T LWH R+GH EK L KQ LL G K
Sbjct: 345 AAATSSSKKDAEATKLWHMRLGHAGEKSLQIFTKQGLLKGTK 386
>emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]
Length = 947
Score = 159 bits (401), Expect = 9e-37
Identities = 79/160 (49%), Positives = 107/160 (66%)
Frame = +1
Query: 163 WILDSGCTFHMTPNKHWFSDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*V 342
WILDSGC+FHM P K WF DFK G V +GNN C+I G V IK +DG+ R L V
Sbjct: 325 WILDSGCSFHMCPIKAWFEDFKEANGGHVLLGNNKHCKILGTSIVRIKHYDGIERVLEVV 384
Query: 343 RYVPNLRRNLISLGVFDTNGFSYKSENGIMKVCKGALVMLKGFKKDGLYHLIGKTVCEAS 522
RY+P L+RNLISLG+ D G+++KS+ ++V +G+L ++KG K+GLY LIG+T+
Sbjct: 385 RYIPELKRNLISLGMLDKLGYTFKSKPNSLRVARGSLTVMKGTIKNGLYTLIGQTMTGKV 444
Query: 523 ALVSKSVPEKTLLWHRRIGHISEKGLHCLQKQNLLGGDKI 642
++V K T LWH+R+GHI+ K L QKQ +LG K+
Sbjct: 445 SIVLKEDMGITKLWHQRLGHINHKRLQEPQKQGVLGNYKL 484
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 158 bits (400), Expect = 1e-36
Identities = 83/214 (38%), Positives = 126/214 (58%), Gaps = 1/214 (0%)
Frame = +1
Query: 1 MKNKCFKRIKEEKQRKQGKGSDKNDKTHDFESDGNSMYXXXXXXXXXXXXXXXHWILDSG 180
+K +C+ K ++ K+ + S+ DG +Y W++DSG
Sbjct: 239 VKKECWSNQKR-REGKEPETSNAQGCVASTSDDGEILYSEATTVSEGRKRLSDVWLIDSG 297
Query: 181 CTFHMTPNKHWFSDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*VRYVPNL 360
T+HMT + WF ++P+ G V+MGN+H EI GIG + IKM DG R + VR+V L
Sbjct: 298 ATWHMTSRREWFHTYEPISGGSVYMGNDHALEIAGIGTIKIKMFDGTIRTIGEVRHVNGL 357
Query: 361 RRNLISLGVFDTNGFSYKSENGIMKVCKGALVMLKGFK-KDGLYHLIGKTVCEASALVSK 537
++NL+SLG D++G+ ENGIMK+ KGALV++K K L+ L G+T+ EA A V+
Sbjct: 358 KKNLLSLGQMDSHGYKTHVENGIMKIVKGALVLMKVEKIGANLFMLKGETLQEADACVAS 417
Query: 538 SVPEKTLLWHRRIGHISEKGLHCLQKQNLLGGDK 639
+ E T++WH ++GH+SE+GL L ++ LL G K
Sbjct: 418 NGEESTMMWHLKLGHMSEQGLKILSERKLLPGLK 451
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 158 bits (399), Expect = 1e-36
Identities = 88/215 (40%), Positives = 121/215 (56%), Gaps = 2/215 (0%)
Frame = +1
Query: 1 MKNKCFKRIKEEKQRKQGKGSDKNDKTHDFESDGNSMYXXXXXXXXXXXXXXXHWILDSG 180
+K C+ K + K + S DG +Y WI+DSG
Sbjct: 239 LKKDCWSNKKSGE--KSSEASTSQGCVASTSDDGEVLYSEAAVSTKGKNRLTDVWIVDSG 296
Query: 181 CTFHMTPNKHWFSDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*VRYVPNL 360
T+HMTP + WF ++P+ G VFMGN+H EI GIG V IKM+DG R L VR+V L
Sbjct: 297 ATWHMTPRRDWFCTYEPVSEGNVFMGNDHALEIVGIGTVKIKMYDGTIRTLQEVRHVKEL 356
Query: 361 RRNLISLGVFDTNGFSYKSENGIMKVCKGALVMLKGFK-KDGLYHLIGKTVCEASALVS- 534
+NL+S+G D G+ Y + GI+KV KG+LV++K K LY L+G T A A V+
Sbjct: 357 AKNLLSVGQLDDLGYKYDIQGGILKVVKGSLVVMKAKKVAANLYMLLGDTWQMADASVAV 416
Query: 535 KSVPEKTLLWHRRIGHISEKGLHCLQKQNLLGGDK 639
S E T++WHRR+GH+SE+GL L ++NL+ G K
Sbjct: 417 GSQEETTMMWHRRLGHMSERGLKVLAERNLIPGLK 451
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 155 bits (393), Expect = 7e-36
Identities = 82/214 (38%), Positives = 124/214 (57%), Gaps = 1/214 (0%)
Frame = +1
Query: 1 MKNKCFKRIKEEKQRKQGKGSDKNDKTHDFESDGNSMYXXXXXXXXXXXXXXXHWILDSG 180
+K +C+ K ++ K+ + S+ DG +Y W++DSG
Sbjct: 239 VKKECWSNQKR-REGKEPESSNAQGCVASTSDDGEILYSEATIVSEGRKRLSDVWLIDSG 297
Query: 181 CTFHMTPNKHWFSDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*VRYVPNL 360
T+HMT + WF ++P+ G V+MGN+H EI GIG + IKM DG R + VR+V L
Sbjct: 298 ATWHMTSRREWFHTYEPISGGSVYMGNDHALEIAGIGTIKIKMFDGTIRTIEEVRHVNGL 357
Query: 361 RRNLISLGVFDTNGFSYKSENGIMKVCKGALVMLKGFK-KDGLYHLIGKTVCEASALVSK 537
++NL+SLG D++G ENGIMK+ KGALV++K K L+ L G+T+ EA A V+
Sbjct: 358 KKNLLSLGQMDSHGCKTHVENGIMKIVKGALVLMKAEKICANLFMLKGETLQEADACVAS 417
Query: 538 SVPEKTLLWHRRIGHISEKGLHCLQKQNLLGGDK 639
+ E T++WH ++GH+SE+GL L ++ L G K
Sbjct: 418 NGEESTMMWHLKLGHMSEQGLKILSERKLPPGLK 451
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 155 bits (392), Expect = 9e-36
Identities = 87/211 (41%), Positives = 121/211 (57%), Gaps = 3/211 (1%)
Frame = +1
Query: 19 KRIKEEKQRKQGKGSDKNDKTHDFESDGNSMYXXXXXXXXXXXXXXXHWILDSGCTFHMT 198
K I + K+ ++GK + D+ D E WILD+ CT+HM
Sbjct: 261 KYIPKGKKEEEGKAAVVTDEKSDAE---------LLVAYAGCAQTSDQWILDTACTYHMC 311
Query: 199 PNKHWFSDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*VRYVPNLRRNLIS 378
PN+ WF+ ++ ++ G V MG++ CE+ GIG V IKM DG R L+ VR++PNL+R+LIS
Sbjct: 312 PNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLIS 371
Query: 379 LGVFDTNGFSYKSENGIMKVCKGALVMLK-GFKKDGLYHLIGKTVCEASALVSKSV--PE 549
L D G+ Y +GI+KV KG+LV++K K LYHL G T+ A VS S+ +
Sbjct: 372 LCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTILGNVATVSDSLSNSD 431
Query: 550 KTLLWHRRIGHISEKGLHCLQKQNLLGGDKI 642
T LWH R+GH+SE GL L K+ LL G I
Sbjct: 432 ATNLWHMRLGHMSEIGLAELSKRGLLDGQSI 462
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 154 bits (389), Expect = 2e-35
Identities = 87/211 (41%), Positives = 120/211 (56%), Gaps = 3/211 (1%)
Frame = +1
Query: 19 KRIKEEKQRKQGKGSDKNDKTHDFESDGNSMYXXXXXXXXXXXXXXXHWILDSGCTFHMT 198
K I + K+ ++GK + D+ D E WILD+ CT+HM
Sbjct: 170 KYIPKGKKEEEGKAAVVTDEKSDAE---------LLVAYAGCAQTSDQWILDTACTYHMC 220
Query: 199 PNKHWFSDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*VRYVPNLRRNLIS 378
PN+ WF+ ++ ++ G V MG++ CE+ GIG V IKM DG R L VR++PNL+R+LIS
Sbjct: 221 PNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLIS 280
Query: 379 LGVFDTNGFSYKSENGIMKVCKGALVMLKG-FKKDGLYHLIGKTVCEASALVSKSV--PE 549
L D G+ Y +GI+KV KG+LV++K K LYHL G T+ A VS S+ +
Sbjct: 281 LCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHLRGTTILGNVAAVSDSLSNSD 340
Query: 550 KTLLWHRRIGHISEKGLHCLQKQNLLGGDKI 642
T LWH R+GH+SE GL L K+ LL G I
Sbjct: 341 ATNLWHMRLGHMSEIGLAELSKRGLLDGQSI 371
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 152 bits (385), Expect = 6e-35
Identities = 87/211 (41%), Positives = 120/211 (56%), Gaps = 3/211 (1%)
Frame = +1
Query: 19 KRIKEEKQRKQGKGSDKNDKTHDFESDGNSMYXXXXXXXXXXXXXXXHWILDSGCTFHMT 198
K I + K+ ++GK + D+ D E WILD+ T+HM
Sbjct: 296 KYIPKGKKEEEGKAAVVTDEKSDTE---------LLVAYAGCAQTSDQWILDTAWTYHMC 346
Query: 199 PNKHWFSDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*VRYVPNLRRNLIS 378
PN+ WF+ ++ L+ G V MG++ CE+ GIG V IKM DG R L+ VR++PNL+R+LIS
Sbjct: 347 PNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLIS 406
Query: 379 LGVFDTNGFSYKSENGIMKVCKGALVMLKG-FKKDGLYHLIGKTVCEASALVSKSV--PE 549
L D G+ Y +GI+KV KG+LV++K K LYHL G T+ A VS S+ +
Sbjct: 407 LCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSD 466
Query: 550 KTLLWHRRIGHISEKGLHCLQKQNLLGGDKI 642
T LWH R+GH+SE GL L K+ LL G I
Sbjct: 467 ATNLWHMRLGHMSEIGLAELSKRELLDGQSI 497
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 152 bits (385), Expect = 6e-35
Identities = 78/163 (47%), Positives = 106/163 (65%), Gaps = 3/163 (1%)
Frame = +1
Query: 163 WILDSGCTFHMTPNKHWFSDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*V 342
WILD+ CT+HM PN+ WF+ ++ ++ G V MG++ CE+ GIG V IKM DG R L+ V
Sbjct: 266 WILDTACTYHMCPNRDWFATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDV 325
Query: 343 RYVPNLRRNLISLGVFDTNGFSYKSENGIMKVCKGALVMLKG-FKKDGLYHLIGKTVCEA 519
R++PNL+R+LIS D G+ Y +GI+KV KG+LV++K K LYHL G T+
Sbjct: 326 RHIPNLKRSLISFCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGN 385
Query: 520 SALVSKSV--PEKTLLWHRRIGHISEKGLHCLQKQNLLGGDKI 642
A VS S+ + T LWH R+GH+SE GL L K+ LL G I
Sbjct: 386 VAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLYGQSI 428
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 152 bits (385), Expect = 6e-35
Identities = 87/211 (41%), Positives = 120/211 (56%), Gaps = 3/211 (1%)
Frame = +1
Query: 19 KRIKEEKQRKQGKGSDKNDKTHDFESDGNSMYXXXXXXXXXXXXXXXHWILDSGCTFHMT 198
K I + K+ ++GK + D+ D E WILD+ T+HM
Sbjct: 296 KYIPKGKKEEEGKAAVVTDEKSDTE---------LLVAYAGCAQTSDQWILDTAWTYHMC 346
Query: 199 PNKHWFSDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*VRYVPNLRRNLIS 378
PN+ WF+ ++ L+ G V MG++ CE+ GIG V IKM DG R L+ VR++PNL+R+LIS
Sbjct: 347 PNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLIS 406
Query: 379 LGVFDTNGFSYKSENGIMKVCKGALVMLKG-FKKDGLYHLIGKTVCEASALVSKSV--PE 549
L D G+ Y +GI+KV KG+LV++K K LYHL G T+ A VS S+ +
Sbjct: 407 LCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSD 466
Query: 550 KTLLWHRRIGHISEKGLHCLQKQNLLGGDKI 642
T LWH R+GH+SE GL L K+ LL G I
Sbjct: 467 ATNLWHMRLGHMSEIGLAELSKRELLDGQSI 497
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 152 bits (384), Expect = 8e-35
Identities = 78/163 (47%), Positives = 106/163 (65%), Gaps = 3/163 (1%)
Frame = +1
Query: 163 WILDSGCTFHMTPNKHWFSDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*V 342
WILD+ CT+HM PN+ WF+ ++ ++ G V MG++ CE+ GIG V IKM DG R L+ V
Sbjct: 117 WILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDV 176
Query: 343 RYVPNLRRNLISLGVFDTNGFSYKSENGIMKVCKGALVMLKG-FKKDGLYHLIGKTVCEA 519
R++PNL+R+LISL D G+ Y +GI+KV KG+LV++K K LYHL G T+
Sbjct: 177 RHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGN 236
Query: 520 SALVSKSV--PEKTLLWHRRIGHISEKGLHCLQKQNLLGGDKI 642
A VS S+ + T LWH R+GH+SE GL L + LL G I
Sbjct: 237 VATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQSI 279
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 152 bits (384), Expect = 8e-35
Identities = 78/163 (47%), Positives = 106/163 (65%), Gaps = 3/163 (1%)
Frame = +1
Query: 163 WILDSGCTFHMTPNKHWFSDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*V 342
WILD+ CT+HM PN+ WF+ ++ ++ G V MG++ CE+ GIG V IKM DG R L+ V
Sbjct: 285 WILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDV 344
Query: 343 RYVPNLRRNLISLGVFDTNGFSYKSENGIMKVCKGALVMLKG-FKKDGLYHLIGKTVCEA 519
R++PNL+R+LISL D G+ Y +GI+KV KG+LV++K K LYHL G T+
Sbjct: 345 RHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGN 404
Query: 520 SALVSKSV--PEKTLLWHRRIGHISEKGLHCLQKQNLLGGDKI 642
A VS S+ + T LWH R+GH+SE GL L + LL G I
Sbjct: 405 VATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQSI 447
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 152 bits (383), Expect = 1e-34
Identities = 85/211 (40%), Positives = 120/211 (56%), Gaps = 3/211 (1%)
Frame = +1
Query: 19 KRIKEEKQRKQGKGSDKNDKTHDFESDGNSMYXXXXXXXXXXXXXXXHWILDSGCTFHMT 198
K + + K+ ++GK + D+ D E WILD+ CT+HM
Sbjct: 93 KYVPKGKKEEEGKAAVVTDEKSDAE---------LLVAYAGCAQTSDQWILDTACTYHMC 143
Query: 199 PNKHWFSDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*VRYVPNLRRNLIS 378
PN+ WF+ ++ ++ G V MG++ CE+ GIG V IKM DG L+ VR++PNL+R+LIS
Sbjct: 144 PNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLIS 203
Query: 379 LGVFDTNGFSYKSENGIMKVCKGALVMLKG-FKKDGLYHLIGKTVCEASALVSKSV--PE 549
L D G+ Y +GI+KV KG+LV++K K LYHL G T+ A VS S+ +
Sbjct: 204 LCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSD 263
Query: 550 KTLLWHRRIGHISEKGLHCLQKQNLLGGDKI 642
T LWH R+GH+SE GL L K+ LL G I
Sbjct: 264 ATNLWHMRLGHMSEIGLAELSKRGLLDGQSI 294
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 152 bits (383), Expect = 1e-34
Identities = 85/211 (40%), Positives = 120/211 (56%), Gaps = 3/211 (1%)
Frame = +1
Query: 19 KRIKEEKQRKQGKGSDKNDKTHDFESDGNSMYXXXXXXXXXXXXXXXHWILDSGCTFHMT 198
K + + K+ ++GK + D+ D E WILD+ CT+HM
Sbjct: 93 KYVPKGKKEEEGKAAVVTDEKSDAE---------LLVAYAGCAQTSDQWILDTACTYHMC 143
Query: 199 PNKHWFSDFKPLEHGKVFMGNNHVCEIKGIGNVFIKMHDGVTRKLT*VRYVPNLRRNLIS 378
PN+ WF+ ++ ++ G V MG++ CE+ GIG V IKM DG L+ VR++PNL+R+LIS
Sbjct: 144 PNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLIS 203
Query: 379 LGVFDTNGFSYKSENGIMKVCKGALVMLKG-FKKDGLYHLIGKTVCEASALVSKSV--PE 549
L D G+ Y +GI+KV KG+LV++K K LYHL G T+ A VS S+ +
Sbjct: 204 LCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSD 263
Query: 550 KTLLWHRRIGHISEKGLHCLQKQNLLGGDKI 642
T LWH R+GH+SE GL L K+ LL G I
Sbjct: 264 ATNLWHMRLGHMSEIGLAELSKRGLLDGQSI 294