BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00000873
         (1852 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine...   545   e-152
ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601...   539   e-150
ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine...   513   e-142
ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619...   501   e-139
ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citr...   501   e-139
gb|EOY18774.1| Pseudouridine synthase family protein isoform 2, ...   499   e-138
ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine...   495   e-137
gb|EOY18773.1| Pseudouridine synthase family protein isoform 1 [...   493   e-136
ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine...   489   e-135
gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabi...   488   e-135
ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Popu...   488   e-135
gb|EMJ19261.1| hypothetical protein PRUPE_ppa006826mg [Prunus pe...   485   e-134
ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutr...   482   e-133
ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, part...   479   e-132
ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsi...   475   e-131
ref|XP_002879786.1| pseudouridine synthase family protein [Arabi...   474   e-131
gb|ESW15747.1| hypothetical protein PHAVU_007G098900g [Phaseolus...   471   e-130
emb|CBI31423.3| unnamed protein product [Vitis vinifera]              469   e-129
ref|XP_004496237.1| PREDICTED: uncharacterized RNA pseudouridine...   457   e-126
gb|EPS61841.1| hypothetical protein M569_12954, partial [Genlise...   451   e-124

>ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Solanum lycopersicum]
          Length = 414

 Score =  545 bits (1403), Expect = e-152
 Identities = 283/396 (71%), Positives = 322/396 (81%), Gaps = 14/396 (3%)
 Frame = -3

Query: 1556 LTRAN---HRHLRTLICSSLSSTPTTEFNITFAXXXXXXXXXP-----IRTATTDSNYDA 1401
            LTRA     RH+RT I SSLSS+ +T+FNITFA         P     I    +DSN D+
Sbjct: 20   LTRATPYTRRHIRTFITSSLSSS-STKFNITFAPPKPKPKTKPEPAIPIINPNSDSNSDS 78

Query: 1400 ----ESELGEQLYIPWIVRDEKGNLTLQSSPPASLLHAMANANTXXXXXXXXXXXXXXXX 1233
                ++E+G+QLYIPWIVRDEKGNLTLQS+PPA LLH MANA+T                
Sbjct: 79   VPNLDAEVGDQLYIPWIVRDEKGNLTLQSTPPARLLHEMANASTGKKKKKGKEVASKAAT 138

Query: 1232 XST--EPKLSKAARRYYNENFRDPPQRLSKVLAAAGVASRRSSEELIFGGKVTVNGSVCN 1059
                 EPK SKAARR+YNENFRDPPQRLSKVLAAAGVASRRSSEELIF G+VTVNGSVC 
Sbjct: 139  VVPTPEPKHSKAARRFYNENFRDPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCK 198

Query: 1058 TPQTRVDPAKDVIYVNGSRLPKKLPPKVYLALNKPKGYICSAGEKETKSALSLFDDYLKS 879
            TPQT+VDPA+DVIYVNG+RLPKKLP KVYLALNKPKGYICS+GEKETKS +SLFDD++KS
Sbjct: 199  TPQTKVDPARDVIYVNGNRLPKKLPTKVYLALNKPKGYICSSGEKETKSVMSLFDDFIKS 258

Query: 878  WGKKNPGLPKPRLFTVGRLDVATTGLIIVTNDGEFAHNLSHPSSNLSKEYIATVDSSVSK 699
            W K++PG PKPRLFTVGRLDVATTGLIIVTNDGEF H +SHPSSNLSKEYIAT+D  V K
Sbjct: 259  WDKRHPGQPKPRLFTVGRLDVATTGLIIVTNDGEFTHQISHPSSNLSKEYIATIDGEVHK 318

Query: 698  QQLMAIGEGTVIEGVHCTPDLVELLPRQPDISRPRIRIVVHEGRNHEVRELVKHAGLQIH 519
            + L+AI EGT+I+GVHCTPD VELLP QPD+SRPR+RIVVHEGRNHEVRELVK+AGLQ+ 
Sbjct: 319  RHLIAISEGTIIDGVHCTPDNVELLPGQPDLSRPRLRIVVHEGRNHEVRELVKNAGLQLR 378

Query: 518  ALKRVRIGGFRLPSDLGIGKYLELKTANLRALGWKS 411
            ALKR+RIGGFRLP+DL +GK++EL  ANL+ALGWKS
Sbjct: 379  ALKRIRIGGFRLPADLALGKHVELNQANLKALGWKS 414


>ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601559 [Solanum tuberosum]
          Length = 413

 Score =  539 bits (1388), Expect = e-150
 Identities = 280/395 (70%), Positives = 318/395 (80%), Gaps = 13/395 (3%)
 Frame = -3

Query: 1556 LTRAN---HRHLRTLICSSLSSTPTTEFNITFAXXXXXXXXXPIRTATTDSNYDAES--- 1395
            LTRA      H+RT I SSLSS+ +T+FNITFA         P      +S+ D++S   
Sbjct: 20   LTRATPYTRLHIRTFITSSLSSS-STKFNITFAPPKPKPKPKPEPAIPINSDSDSDSNSV 78

Query: 1394 -----ELGEQLYIPWIVRDEKGNLTLQSSPPASLLHAMANANTXXXXXXXXXXXXXXXXX 1230
                 E+G+QLYIPWIVRDEKGNLTLQS+PPA LLH MANA+T                 
Sbjct: 79   PNLEAEIGDQLYIPWIVRDEKGNLTLQSTPPARLLHEMANASTSKKKKKGKEVASKAATV 138

Query: 1229 ST--EPKLSKAARRYYNENFRDPPQRLSKVLAAAGVASRRSSEELIFGGKVTVNGSVCNT 1056
                EPK SKAARR+YNENFRDPPQRLSKVLAAAGVASRRSSEELIF G+VTVNGSVC T
Sbjct: 139  VPTPEPKHSKAARRFYNENFRDPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCKT 198

Query: 1055 PQTRVDPAKDVIYVNGSRLPKKLPPKVYLALNKPKGYICSAGEKETKSALSLFDDYLKSW 876
            PQT+VDPA+DVIYVNG+RLPKKLP KVYLALNKPKGYICS+GEKETKS +SLFDD++KSW
Sbjct: 199  PQTKVDPARDVIYVNGNRLPKKLPTKVYLALNKPKGYICSSGEKETKSVMSLFDDFIKSW 258

Query: 875  GKKNPGLPKPRLFTVGRLDVATTGLIIVTNDGEFAHNLSHPSSNLSKEYIATVDSSVSKQ 696
             K++PG PKPRLFTVGRLDVATTGLIIVTNDGEF H +SHPSSNLSKEYIAT+D  V K+
Sbjct: 259  DKRHPGQPKPRLFTVGRLDVATTGLIIVTNDGEFTHQISHPSSNLSKEYIATIDGEVHKR 318

Query: 695  QLMAIGEGTVIEGVHCTPDLVELLPRQPDISRPRIRIVVHEGRNHEVRELVKHAGLQIHA 516
             L+AI EGTVI+GVHC PD VELLP QPD+SRPR+RIVVHEGRNHEVRELVK+AGLQ+ A
Sbjct: 319  HLIAISEGTVIDGVHCIPDNVELLPGQPDLSRPRLRIVVHEGRNHEVRELVKNAGLQLRA 378

Query: 515  LKRVRIGGFRLPSDLGIGKYLELKTANLRALGWKS 411
            LKR+RIGGFRLP+DL +GK++EL  ANL+ALGWKS
Sbjct: 379  LKRIRIGGFRLPADLALGKHVELNQANLKALGWKS 413


>ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464 isoform
            1 [Vitis vinifera]
          Length = 393

 Score =  513 bits (1321), Expect = e-142
 Identities = 267/394 (67%), Positives = 307/394 (77%), Gaps = 3/394 (0%)
 Frame = -3

Query: 1583 HVSKPAIITLTRANHRHLRTL-ICSSLS--STPTTEFNITFAXXXXXXXXXPIRTATTDS 1413
            H+S+P++        RH RT+ + SS+S  ST + EFNI+FA                  
Sbjct: 23   HLSRPSLA------RRHFRTIPVRSSISPPSTTSAEFNISFAPK--------------SK 62

Query: 1412 NYDAESELGEQLYIPWIVRDEKGNLTLQSSPPASLLHAMANANTXXXXXXXXXXXXXXXX 1233
            N   +SE    L IPWIVRDE GNL +QS+PP   L  MA A                  
Sbjct: 63   NPKPQSET---LLIPWIVRDENGNLRVQSTPPERYLQDMAKAKALSAKKKKKKEESTARA 119

Query: 1232 XSTEPKLSKAARRYYNENFRDPPQRLSKVLAAAGVASRRSSEELIFGGKVTVNGSVCNTP 1053
             + EPK SKAARR+YNENFRDPPQRLSKVLAAAGVASRR+SEELIF G+VTVNGSVCNTP
Sbjct: 120  VAVEPKYSKAARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNTP 179

Query: 1052 QTRVDPAKDVIYVNGSRLPKKLPPKVYLALNKPKGYICSAGEKETKSALSLFDDYLKSWG 873
            QTRVDPA+D+IYVNG+RLPKKLPPKVYLALNKPKGYICS+GEKE+KS L LFDDYLKSW 
Sbjct: 180  QTRVDPARDMIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKESKSVLCLFDDYLKSWN 239

Query: 872  KKNPGLPKPRLFTVGRLDVATTGLIIVTNDGEFAHNLSHPSSNLSKEYIATVDSSVSKQQ 693
            K+NPG+PKPR+FTVGRLDVATTGLII+TNDG+FA  LSHPSS LSKEYIAT+D  V+K+ 
Sbjct: 240  KQNPGVPKPRIFTVGRLDVATTGLIILTNDGDFAQKLSHPSSKLSKEYIATIDGVVNKRH 299

Query: 692  LMAIGEGTVIEGVHCTPDLVELLPRQPDISRPRIRIVVHEGRNHEVRELVKHAGLQIHAL 513
            L+AI EGTVIEGVHCTPD VELLP QP+IS+PR+R+VVHEGRNHEVRELVK AGLQIH+L
Sbjct: 300  LIAISEGTVIEGVHCTPDSVELLPPQPNISKPRLRVVVHEGRNHEVRELVKSAGLQIHSL 359

Query: 512  KRVRIGGFRLPSDLGIGKYLELKTANLRALGWKS 411
            KR+RIGGFRLPSDLG GK++ELK  +L+ALGWKS
Sbjct: 360  KRIRIGGFRLPSDLGHGKHVELKQGDLKALGWKS 393


>ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619728 [Citrus sinensis]
          Length = 401

 Score =  501 bits (1289), Expect = e-139
 Identities = 252/371 (67%), Positives = 296/371 (79%), Gaps = 7/371 (1%)
 Frame = -3

Query: 1502 STPTTEFNITFAXXXXXXXXXPIRTATTDSNYDAESELGEQLYIPWIVRDEKGNLTLQSS 1323
            S+ + +FNI+FA           R  T   ++++     +QL+IPWIVR E GNL LQ+ 
Sbjct: 39   SSSSLQFNISFAPPK--------RKKTQQDDFESGEGSEQQLFIPWIVRGEDGNLKLQTH 90

Query: 1322 PPASLLHAMANANTXXXXXXXXXXXXXXXXXSTE-------PKLSKAARRYYNENFRDPP 1164
            PPA L+H +A+A T                 +         PKLSKAARR+YN+NFRD P
Sbjct: 91   PPARLVHTLADAKTQNLKVNKKKNDTSAAAAAAAAGGPKAAPKLSKAARRFYNDNFRDTP 150

Query: 1163 QRLSKVLAAAGVASRRSSEELIFGGKVTVNGSVCNTPQTRVDPAKDVIYVNGSRLPKKLP 984
            +RLSKVLAAAGVASRRSSEELIF G+VTVNGSVCNTPQTRVDPA+D+IYVNG RLPKKLP
Sbjct: 151  ERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTPQTRVDPARDIIYVNGKRLPKKLP 210

Query: 983  PKVYLALNKPKGYICSAGEKETKSALSLFDDYLKSWGKKNPGLPKPRLFTVGRLDVATTG 804
            PKVYLALNKPKGYICSAGEKE KS +SLFDDYLKSW K+NPGLP+PRLFTVGRLDVATTG
Sbjct: 211  PKVYLALNKPKGYICSAGEKEVKSVMSLFDDYLKSWDKRNPGLPRPRLFTVGRLDVATTG 270

Query: 803  LIIVTNDGEFAHNLSHPSSNLSKEYIATVDSSVSKQQLMAIGEGTVIEGVHCTPDLVELL 624
            LIIVTNDG+FA  +SHPSS L KEYIAT+D +V+K+ L+AI EGTVIEG HCTPD+VELL
Sbjct: 271  LIIVTNDGDFAQAVSHPSSKLQKEYIATIDGAVNKRHLIAISEGTVIEGTHCTPDVVELL 330

Query: 623  PRQPDISRPRIRIVVHEGRNHEVRELVKHAGLQIHALKRVRIGGFRLPSDLGIGKYLELK 444
            P QPDI RPRIRIVVHEGRNHEVRELVK+AGL++++LKR+RIGGFRLPSDLGIG ++ELK
Sbjct: 331  PPQPDIPRPRIRIVVHEGRNHEVRELVKNAGLKLYSLKRLRIGGFRLPSDLGIGMHVELK 390

Query: 443  TANLRALGWKS 411
             ++L+ +GWKS
Sbjct: 391  QSDLKLMGWKS 401


>ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citrus clementina]
            gi|557538690|gb|ESR49734.1| hypothetical protein
            CICLE_v10031516mg [Citrus clementina]
          Length = 451

 Score =  501 bits (1289), Expect = e-139
 Identities = 252/371 (67%), Positives = 296/371 (79%), Gaps = 7/371 (1%)
 Frame = -3

Query: 1502 STPTTEFNITFAXXXXXXXXXPIRTATTDSNYDAESELGEQLYIPWIVRDEKGNLTLQSS 1323
            S+ + +FNI+FA           R  T   ++++     +QL+IPWIVR E GNL LQ+ 
Sbjct: 89   SSSSLQFNISFAPPK--------RKKTQQDDFESGEGSEQQLFIPWIVRGEDGNLKLQTH 140

Query: 1322 PPASLLHAMANANTXXXXXXXXXXXXXXXXXSTE-------PKLSKAARRYYNENFRDPP 1164
            PPA L+H +A+A T                 +         PKLSKAARR+YN+NFRD P
Sbjct: 141  PPARLVHTLADAKTQNLKVNKKKNDTSAAAAAAAAGGPKAAPKLSKAARRFYNDNFRDTP 200

Query: 1163 QRLSKVLAAAGVASRRSSEELIFGGKVTVNGSVCNTPQTRVDPAKDVIYVNGSRLPKKLP 984
            +RLSKVLAAAGVASRRSSEELIF G+VTVNGSVCNTPQTRVDPA+D+IYVNG RLPKKLP
Sbjct: 201  ERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTPQTRVDPARDIIYVNGKRLPKKLP 260

Query: 983  PKVYLALNKPKGYICSAGEKETKSALSLFDDYLKSWGKKNPGLPKPRLFTVGRLDVATTG 804
            PKVYLALNKPKGYICSAGEKE KS +SLFDDYLKSW K+NPGLP+PRLFTVGRLDVATTG
Sbjct: 261  PKVYLALNKPKGYICSAGEKEVKSVMSLFDDYLKSWDKRNPGLPRPRLFTVGRLDVATTG 320

Query: 803  LIIVTNDGEFAHNLSHPSSNLSKEYIATVDSSVSKQQLMAIGEGTVIEGVHCTPDLVELL 624
            LIIVTNDG+FA  +SHPSS L KEYIAT+D +V+K+ L+AI EGTVIEG HCTPD+VELL
Sbjct: 321  LIIVTNDGDFAQAVSHPSSKLQKEYIATIDGAVNKRHLIAISEGTVIEGTHCTPDVVELL 380

Query: 623  PRQPDISRPRIRIVVHEGRNHEVRELVKHAGLQIHALKRVRIGGFRLPSDLGIGKYLELK 444
            P QPDI RPRIRIVVHEGRNHEVRELVK+AGL++++LKR+RIGGFRLPSDLGIG ++ELK
Sbjct: 381  PPQPDIPRPRIRIVVHEGRNHEVRELVKNAGLKLYSLKRLRIGGFRLPSDLGIGMHVELK 440

Query: 443  TANLRALGWKS 411
             ++L+ +GWKS
Sbjct: 441  QSDLKLMGWKS 451


>gb|EOY18774.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma
            cacao]
          Length = 398

 Score =  499 bits (1285), Expect = e-138
 Identities = 256/377 (67%), Positives = 290/377 (76%), Gaps = 11/377 (2%)
 Frame = -3

Query: 1508 LSSTPTTEFNITFAXXXXXXXXXPIRTATTDSNYDAESE----LGEQLYIPWIVRDEKGN 1341
            ++S+ + +FNITFA                D   D           QL+IPWIVR E GN
Sbjct: 22   ITSSSSLQFNITFAPPNPKLKPRTPPNLKNDVVLDDSESPPLPSNGQLFIPWIVRGEDGN 81

Query: 1340 LTLQSSPPASLLHAMANANTXXXXXXXXXXXXXXXXXST-------EPKLSKAARRYYNE 1182
            L LQ+ PPA L+HA+A+A T                 S         PKLSKAARR+YNE
Sbjct: 82   LKLQAHPPARLIHALADAKTQKPKKKVDKAVKKKKEISAVGNASVEPPKLSKAARRFYNE 141

Query: 1181 NFRDPPQRLSKVLAAAGVASRRSSEELIFGGKVTVNGSVCNTPQTRVDPAKDVIYVNGSR 1002
            NF +PPQRLSKVLAAAGVASRR SEELIF GKVTVNGSVCN PQTRVDPAKD+IYVNGSR
Sbjct: 142  NFTEPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQTRVDPAKDIIYVNGSR 201

Query: 1001 LPKKLPPKVYLALNKPKGYICSAGEKETKSALSLFDDYLKSWGKKNPGLPKPRLFTVGRL 822
            LPKKLPPK+YLALNKPKGYICS+GEKE KS L LF+DYLK W K N G PKPRLFTVGRL
Sbjct: 202  LPKKLPPKIYLALNKPKGYICSSGEKEFKSVLDLFEDYLKRWDKMNRGSPKPRLFTVGRL 261

Query: 821  DVATTGLIIVTNDGEFAHNLSHPSSNLSKEYIATVDSSVSKQQLMAIGEGTVIEGVHCTP 642
            DVATTGLIIVTNDG+FA  LSHPSSNL+KEYIAT+D  V K+ L+AI EGT IEG+HC P
Sbjct: 262  DVATTGLIIVTNDGDFAQKLSHPSSNLNKEYIATIDGEVKKRHLIAISEGTEIEGIHCIP 321

Query: 641  DLVELLPRQPDISRPRIRIVVHEGRNHEVRELVKHAGLQIHALKRVRIGGFRLPSDLGIG 462
            D VELLPRQPD+SRPR+RIVVHEGRNHEVRELVK+AGL+IH+LKRVRIGGFRLP+DLG+G
Sbjct: 322  DSVELLPRQPDLSRPRLRIVVHEGRNHEVRELVKNAGLEIHSLKRVRIGGFRLPADLGLG 381

Query: 461  KYLELKTANLRALGWKS 411
            K++ELK ++LRA+GWKS
Sbjct: 382  KHVELKQSDLRAMGWKS 398


>ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Cucumis sativus] gi|449490423|ref|XP_004158601.1|
            PREDICTED: uncharacterized RNA pseudouridine synthase
            aq_1464-like [Cucumis sativus]
          Length = 398

 Score =  495 bits (1275), Expect = e-137
 Identities = 253/368 (68%), Positives = 289/368 (78%)
 Frame = -3

Query: 1514 SSLSSTPTTEFNITFAXXXXXXXXXPIRTATTDSNYDAESELGEQLYIPWIVRDEKGNLT 1335
            +S SS+ + EFNITFA           ++   D     +   G QL+IPWIVR E GNL 
Sbjct: 40   ASSSSSSSLEFNITFAPPKPKP-----KSEVEDPFQFIDRNSGGQLFIPWIVRGEDGNLK 94

Query: 1334 LQSSPPASLLHAMANANTXXXXXXXXXXXXXXXXXSTEPKLSKAARRYYNENFRDPPQRL 1155
            LQS PP   LH+++   T                    PK SKAARR+YNEN R+  QRL
Sbjct: 95   LQSHPPTRFLHSVSEDETKPKKKKVSAGKPITEP----PKHSKAARRFYNENIRESSQRL 150

Query: 1154 SKVLAAAGVASRRSSEELIFGGKVTVNGSVCNTPQTRVDPAKDVIYVNGSRLPKKLPPKV 975
            SKVLAAAGVASRRSSEELIFGG+VTVNGSVCNTPQTRVDPA+D+IYVNG+RLPKKLPPKV
Sbjct: 151  SKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLPPKV 210

Query: 974  YLALNKPKGYICSAGEKETKSALSLFDDYLKSWGKKNPGLPKPRLFTVGRLDVATTGLII 795
            YLALNKPKGYICS+G+KE+KS +SLFDDYLKSW K  PG PKPRLFTVGRLDVATTGLII
Sbjct: 211  YLALNKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTGLII 270

Query: 794  VTNDGEFAHNLSHPSSNLSKEYIATVDSSVSKQQLMAIGEGTVIEGVHCTPDLVELLPRQ 615
            VTNDG+FA  +SHPSS LSKEYIA +D +VSKQ L+AI EGT+I+GVHCTPD VELLPRQ
Sbjct: 271  VTNDGDFAQGISHPSSGLSKEYIAAIDGTVSKQNLIAISEGTIIDGVHCTPDSVELLPRQ 330

Query: 614  PDISRPRIRIVVHEGRNHEVRELVKHAGLQIHALKRVRIGGFRLPSDLGIGKYLELKTAN 435
            PDIS+ R+RIVVHEGRNHEVRELVK AGL+I++LKRVRIGGFRLPSDLG+G Y ELK + 
Sbjct: 331  PDISKSRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGFRLPSDLGLGSYTELKQSE 390

Query: 434  LRALGWKS 411
            L+A+GWKS
Sbjct: 391  LKAIGWKS 398


>gb|EOY18773.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
          Length = 453

 Score =  493 bits (1268), Expect = e-136
 Identities = 256/383 (66%), Positives = 290/383 (75%), Gaps = 17/383 (4%)
 Frame = -3

Query: 1508 LSSTPTTEFNITFAXXXXXXXXXPIRTATTDSNYDAESE----LGEQLYIPWIVRDEKGN 1341
            ++S+ + +FNITFA                D   D           QL+IPWIVR E GN
Sbjct: 71   ITSSSSLQFNITFAPPNPKLKPRTPPNLKNDVVLDDSESPPLPSNGQLFIPWIVRGEDGN 130

Query: 1340 LTLQSSPPASLLHAMANANTXXXXXXXXXXXXXXXXXST-------EPKLSKAARRYYNE 1182
            L LQ+ PPA L+HA+A+A T                 S         PKLSKAARR+YNE
Sbjct: 131  LKLQAHPPARLIHALADAKTQKPKKKVDKAVKKKKEISAVGNASVEPPKLSKAARRFYNE 190

Query: 1181 NFRDPPQRLSKVLAAAGVASRRSSEELIFGGKVTVNGSVCNTPQ------TRVDPAKDVI 1020
            NF +PPQRLSKVLAAAGVASRR SEELIF GKVTVNGSVCN PQ      TRVDPAKD+I
Sbjct: 191  NFTEPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQASDNLQTRVDPAKDII 250

Query: 1019 YVNGSRLPKKLPPKVYLALNKPKGYICSAGEKETKSALSLFDDYLKSWGKKNPGLPKPRL 840
            YVNGSRLPKKLPPK+YLALNKPKGYICS+GEKE KS L LF+DYLK W K N G PKPRL
Sbjct: 251  YVNGSRLPKKLPPKIYLALNKPKGYICSSGEKEFKSVLDLFEDYLKRWDKMNRGSPKPRL 310

Query: 839  FTVGRLDVATTGLIIVTNDGEFAHNLSHPSSNLSKEYIATVDSSVSKQQLMAIGEGTVIE 660
            FTVGRLDVATTGLIIVTNDG+FA  LSHPSSNL+KEYIAT+D  V K+ L+AI EGT IE
Sbjct: 311  FTVGRLDVATTGLIIVTNDGDFAQKLSHPSSNLNKEYIATIDGEVKKRHLIAISEGTEIE 370

Query: 659  GVHCTPDLVELLPRQPDISRPRIRIVVHEGRNHEVRELVKHAGLQIHALKRVRIGGFRLP 480
            G+HC PD VELLPRQPD+SRPR+RIVVHEGRNHEVRELVK+AGL+IH+LKRVRIGGFRLP
Sbjct: 371  GIHCIPDSVELLPRQPDLSRPRLRIVVHEGRNHEVRELVKNAGLEIHSLKRVRIGGFRLP 430

Query: 479  SDLGIGKYLELKTANLRALGWKS 411
            +DLG+GK++ELK ++LRA+GWKS
Sbjct: 431  ADLGLGKHVELKQSDLRAMGWKS 453


>ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Fragaria vesca subsp. vesca]
          Length = 397

 Score =  489 bits (1259), Expect = e-135
 Identities = 258/386 (66%), Positives = 300/386 (77%), Gaps = 1/386 (0%)
 Frame = -3

Query: 1559 TLTRANHRHLRTLICSSLSSTPTTEFNITFAXXXXXXXXXPIRTATTDSNYDAESELGEQ 1380
            +L+    R L  L CSS     + EFNITFA             A++ S+       G+Q
Sbjct: 20   SLSLTPFRTLPRLTCSS-----SLEFNITFAPAPKPKPDPNSLPASSSSS-------GQQ 67

Query: 1379 LYIPWIVRDEKGNLTLQSSPPASLLHAMANANTXXXXXXXXXXXXXXXXXST-EPKLSKA 1203
            L+IPWIVR E G L LQS PPA LLH MA A+T                  T EPK SKA
Sbjct: 68   LFIPWIVRGEDGKLKLQSHPPARLLHEMAQADTKTKSKKNKDTAQKKQRVLTAEPKHSKA 127

Query: 1202 ARRYYNENFRDPPQRLSKVLAAAGVASRRSSEELIFGGKVTVNGSVCNTPQTRVDPAKDV 1023
            ARR+YNENFR+  QRLSKVLAAAGVASRRSSE+LIF GKVTVNGSVCNTPQT VDP +D+
Sbjct: 128  ARRFYNENFRES-QRLSKVLAAAGVASRRSSEQLIFDGKVTVNGSVCNTPQTPVDPGRDI 186

Query: 1022 IYVNGSRLPKKLPPKVYLALNKPKGYICSAGEKETKSALSLFDDYLKSWGKKNPGLPKPR 843
            IYVNG+RLPKKLPPKVYLALNKPKGYIC+AGEK  KS LSLFDDYLKSW K+NPG P+PR
Sbjct: 187  IYVNGNRLPKKLPPKVYLALNKPKGYICAAGEK--KSVLSLFDDYLKSWDKRNPGTPRPR 244

Query: 842  LFTVGRLDVATTGLIIVTNDGEFAHNLSHPSSNLSKEYIATVDSSVSKQQLMAIGEGTVI 663
            LFTVGRLDVATTGLI+VTNDG+FA ++SHPS+NL+KEYIA ++ SVSK+ L+AI EGTVI
Sbjct: 245  LFTVGRLDVATTGLIVVTNDGDFAQSISHPSANLTKEYIAVIEGSVSKKSLIAISEGTVI 304

Query: 662  EGVHCTPDLVELLPRQPDISRPRIRIVVHEGRNHEVRELVKHAGLQIHALKRVRIGGFRL 483
            +GVHCTPD VELLP+QP+ISR R+RIVVHEGRNHEVRELVK AGL+IH+LKRVRIGGFRL
Sbjct: 305  DGVHCTPDSVELLPQQPEISRSRLRIVVHEGRNHEVRELVKKAGLEIHSLKRVRIGGFRL 364

Query: 482  PSDLGIGKYLELKTANLRALGWKS*K 405
            P++LG+G ++EL+  +L ALGWK+ K
Sbjct: 365  PTNLGLGTHMELRQGDLSALGWKTKK 390


>gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabilis]
          Length = 404

 Score =  488 bits (1255), Expect = e-135
 Identities = 257/402 (63%), Positives = 305/402 (75%), Gaps = 10/402 (2%)
 Frame = -3

Query: 1586 LHVSKPAIITLT----RANHRHLRTLICSSLSSTPTTEFNITFAXXXXXXXXXPIRTATT 1419
            LH    ++++L+    R + RH+   +  SLSS+ T+EFNI+FA                
Sbjct: 12   LHHLSSSLLSLSSLSLRPSIRHILPRVLCSLSSS-TSEFNISFAPAKPKPQP---EATEV 67

Query: 1418 DSNYDAESELGEQLYIPWIVRDEKGNLTLQSSPPASLLHAMANANTXXXXXXXXXXXXXX 1239
            DS + A+   G QL+IPWI+R + GNL LQS PPA LLHAMA+A+T              
Sbjct: 68   DSLFGAD---GSQLFIPWIIRGDDGNLKLQSHPPARLLHAMAHADTKNSKKKKPTAAEKK 124

Query: 1238 XXXS------TEPKLSKAARRYYNENFRDPPQRLSKVLAAAGVASRRSSEELIFGGKVTV 1077
                       EPK SKAARR+YNENFR+  QRLSKVLAAAGVASRR+SEELI  G+VTV
Sbjct: 125  KKNDKADKSVAEPKYSKAARRFYNENFRESDQRLSKVLAAAGVASRRNSEELILEGRVTV 184

Query: 1076 NGSVCNTPQTRVDPAKDVIYVNGSRLPKKLPPKVYLALNKPKGYICSAGEKETKSALSLF 897
            NGSVCNTPQTRVDPAKDVIYVNG+RLPK+LPPKVYLALNKPKGYICS G+K  KS +SLF
Sbjct: 185  NGSVCNTPQTRVDPAKDVIYVNGNRLPKRLPPKVYLALNKPKGYICSVGDK--KSVMSLF 242

Query: 896  DDYLKSWGKKNPGLPKPRLFTVGRLDVATTGLIIVTNDGEFAHNLSHPSSNLSKEYIATV 717
            DDYLK W K+N G  KPRLFTVGRLDVATTGLIIVTNDG+FA  LSHPSSNLSKEYIAT+
Sbjct: 243  DDYLKIWDKRNLGQSKPRLFTVGRLDVATTGLIIVTNDGDFAQKLSHPSSNLSKEYIATI 302

Query: 716  DSSVSKQQLMAIGEGTVIEGVHCTPDLVELLPRQPDISRPRIRIVVHEGRNHEVRELVKH 537
            + +VSK+ L+ I EGT I+GVHC PD VELLP QP++ RPR+R+VVH+GR HEVREL+K+
Sbjct: 303  EGTVSKKHLLVISEGTFIDGVHCVPDSVELLPNQPEMPRPRLRVVVHDGRKHEVRELMKN 362

Query: 536  AGLQIHALKRVRIGGFRLPSDLGIGKYLELKTANLRALGWKS 411
            AGL+IH+LKRVRIGG+RLPSDLG+GK++ELK  +L ALGWKS
Sbjct: 363  AGLEIHSLKRVRIGGYRLPSDLGLGKHVELKQGDLSALGWKS 404


>ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Populus trichocarpa]
            gi|550332354|gb|EEE89362.2| hypothetical protein
            POPTR_0008s03540g [Populus trichocarpa]
          Length = 397

 Score =  488 bits (1255), Expect = e-135
 Identities = 251/366 (68%), Positives = 283/366 (77%), Gaps = 4/366 (1%)
 Frame = -3

Query: 1499 TPTTEFNITFAXXXXXXXXXPIRTATTDSNYDAESELGEQLYIPWIVRDEKGNLTLQSSP 1320
            T + EFNITFA             A   ++  + S    QL+IPWIVR E GNL LQS+P
Sbjct: 35   TASLEFNITFAPPKPKPKLP----ANLQTDAASLSLPPGQLFIPWIVRGEDGNLKLQSNP 90

Query: 1319 PASLLHAMANANTXXXXXXXXXXXXXXXXXST----EPKLSKAARRYYNENFRDPPQRLS 1152
            PA L+HA+A+A T                       EP  SKAARR+YNENFRD  QRLS
Sbjct: 91   PARLIHAIADAKTQPKKKKDKVKKESSGNVKAKLEAEPTRSKAARRFYNENFRDQAQRLS 150

Query: 1151 KVLAAAGVASRRSSEELIFGGKVTVNGSVCNTPQTRVDPAKDVIYVNGSRLPKKLPPKVY 972
            KVLAAAGVASRRSSE LIF GKVTVNGSVCNTPQTRVDP +D IYVNG+RLPKKLPPK+Y
Sbjct: 151  KVLAAAGVASRRSSEALIFEGKVTVNGSVCNTPQTRVDPGRDAIYVNGNRLPKKLPPKIY 210

Query: 971  LALNKPKGYICSAGEKETKSALSLFDDYLKSWGKKNPGLPKPRLFTVGRLDVATTGLIIV 792
            +ALNKPKGYICS GEKE+KS + L DDY +SW K+NPGLPKPRLFTVGRLDVATTGLIIV
Sbjct: 211  IALNKPKGYICSLGEKESKSVMCLLDDYFQSWDKRNPGLPKPRLFTVGRLDVATTGLIIV 270

Query: 791  TNDGEFAHNLSHPSSNLSKEYIATVDSSVSKQQLMAIGEGTVIEGVHCTPDLVELLPRQP 612
            TNDG+FA  ++HPSSNLSKEYIATVD  VSK+ L A+ EGTVIEGV C PD VELLP+QP
Sbjct: 271  TNDGDFAQQIAHPSSNLSKEYIATVDGVVSKRHLFAVSEGTVIEGVRCVPDSVELLPQQP 330

Query: 611  DISRPRIRIVVHEGRNHEVRELVKHAGLQIHALKRVRIGGFRLPSDLGIGKYLELKTANL 432
            D  RPR+RIVVHEGRNHEVRELVK+AGL+IH+LKRVRIGGFRLPSDLG+GK+ ELK  +L
Sbjct: 331  DRPRPRLRIVVHEGRNHEVRELVKNAGLEIHSLKRVRIGGFRLPSDLGLGKHAELKQTDL 390

Query: 431  RALGWK 414
            + LGWK
Sbjct: 391  KTLGWK 396


>gb|EMJ19261.1| hypothetical protein PRUPE_ppa006826mg [Prunus persica]
          Length = 393

 Score =  485 bits (1248), Expect = e-134
 Identities = 253/372 (68%), Positives = 288/372 (77%)
 Frame = -3

Query: 1526 TLICSSLSSTPTTEFNITFAXXXXXXXXXPIRTATTDSNYDAESELGEQLYIPWIVRDEK 1347
            T   S+ SS+ + EFNITFA         P      DS       L  QL IPWIVR E 
Sbjct: 34   TCSLSTSSSSSSLEFNITFAPSKPKPKLKP------DSAEPDPEALAGQLIIPWIVRGED 87

Query: 1346 GNLTLQSSPPASLLHAMANANTXXXXXXXXXXXXXXXXXSTEPKLSKAARRYYNENFRDP 1167
            GNL LQS PPA  L A+   +                    EPK SKAARR+YNENFRD 
Sbjct: 88   GNLKLQSHPPARFLQAIETKSKTKKKKEGAEKRVPT----AEPKYSKAARRFYNENFRDA 143

Query: 1166 PQRLSKVLAAAGVASRRSSEELIFGGKVTVNGSVCNTPQTRVDPAKDVIYVNGSRLPKKL 987
             QRLSKVLAAAGVASRRSSE+LIF GKVTVNGSVCNTPQ+RVDP +D+IYVNG+RLPK+L
Sbjct: 144  SQRLSKVLAAAGVASRRSSEQLIFDGKVTVNGSVCNTPQSRVDPGRDIIYVNGNRLPKRL 203

Query: 986  PPKVYLALNKPKGYICSAGEKETKSALSLFDDYLKSWGKKNPGLPKPRLFTVGRLDVATT 807
            PPKVYLALNKPKGYIC++GE   KS LSLF+DYLK+W K+N G+P+PRLFTVGRLDVATT
Sbjct: 204  PPKVYLALNKPKGYICASGEN--KSVLSLFEDYLKTWDKRNSGIPRPRLFTVGRLDVATT 261

Query: 806  GLIIVTNDGEFAHNLSHPSSNLSKEYIATVDSSVSKQQLMAIGEGTVIEGVHCTPDLVEL 627
            GLIIVTNDG+FA  +SHPSSNLSKEYIA ++  VSK+ L+AI EGTVIEGVHCTPD VEL
Sbjct: 262  GLIIVTNDGDFAQKISHPSSNLSKEYIAAIEGVVSKRHLLAISEGTVIEGVHCTPDSVEL 321

Query: 626  LPRQPDISRPRIRIVVHEGRNHEVRELVKHAGLQIHALKRVRIGGFRLPSDLGIGKYLEL 447
            LP+QPD+SRPR+RIVVHEGRNHEVRELVK+AGL+IH+LKRVRIGGFRLPSDLG+GK++ L
Sbjct: 322  LPQQPDMSRPRLRIVVHEGRNHEVRELVKNAGLEIHSLKRVRIGGFRLPSDLGLGKHMAL 381

Query: 446  KTANLRALGWKS 411
            K  +L ALGWKS
Sbjct: 382  KQGDLSALGWKS 393


>ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutrema salsugineum]
            gi|557112308|gb|ESQ52592.1| hypothetical protein
            EUTSA_v10016747mg [Eutrema salsugineum]
          Length = 403

 Score =  482 bits (1241), Expect = e-133
 Identities = 247/386 (63%), Positives = 293/386 (75%), Gaps = 12/386 (3%)
 Frame = -3

Query: 1532 LRTLICS--SLSSTPTTEFNITFAXXXXXXXXXPIRTATTDSNYDAESELGEQLYIPWIV 1359
            +RTL CS  S SS+   EF+ITFA               T S+    + + +QL+IPWIV
Sbjct: 30   IRTLRCSLSSSSSSEPLEFDITFAPPKP-----------TPSSTRGGAGV-QQLFIPWIV 77

Query: 1358 RDEKGNLTLQSSPPASLLHAMANANT----------XXXXXXXXXXXXXXXXXSTEPKLS 1209
            R E G L +QS PPA L+HA+A+A T                            ++PKLS
Sbjct: 78   RGEDGKLKVQSQPPARLIHALADATTQNPKKKDKSKKKKPQSTSASTPSSPASHSKPKLS 137

Query: 1208 KAARRYYNENFRDPPQRLSKVLAAAGVASRRSSEELIFGGKVTVNGSVCNTPQTRVDPAK 1029
            KAARR+YNENF+DPPQRLSKVLAAAGVASRR+SEELIF GKVTVNGS+C  PQ RVDP +
Sbjct: 138  KAARRFYNENFKDPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGSLCTAPQIRVDPTR 197

Query: 1028 DVIYVNGSRLPKKLPPKVYLALNKPKGYICSAGEKETKSALSLFDDYLKSWGKKNPGLPK 849
            D+IYVNG+R+PKKLPPKVY ALNKPKGYICS+GEKE KS +SLFDD+L SW K+NPG PK
Sbjct: 198  DIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEVKSVISLFDDFLASWDKRNPGTPK 257

Query: 848  PRLFTVGRLDVATTGLIIVTNDGEFAHNLSHPSSNLSKEYIATVDSSVSKQQLMAIGEGT 669
            PRLFTVGRLDVATTGLI+VTNDG+FA  LSHPSS+L KEYI TV   V K+ LM I EGT
Sbjct: 258  PRLFTVGRLDVATTGLIVVTNDGDFAQKLSHPSSSLPKEYITTVVGDVHKRHLMTISEGT 317

Query: 668  VIEGVHCTPDLVELLPRQPDISRPRIRIVVHEGRNHEVRELVKHAGLQIHALKRVRIGGF 489
            ++EGVHC PD VEL+P+Q DI R R+RIVVHEGRNHEVRE+VK+AGL++H+LKRVRIGGF
Sbjct: 318  IVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVREIVKNAGLEVHSLKRVRIGGF 377

Query: 488  RLPSDLGIGKYLELKTANLRALGWKS 411
            RLPSDLG+GK++ELK + L+A+GWKS
Sbjct: 378  RLPSDLGLGKHVELKQSELKAMGWKS 403


>ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, partial [Capsella rubella]
            gi|482562896|gb|EOA27086.1| hypothetical protein
            CARUB_v10023183mg, partial [Capsella rubella]
          Length = 456

 Score =  479 bits (1232), Expect = e-132
 Identities = 245/391 (62%), Positives = 289/391 (73%), Gaps = 18/391 (4%)
 Frame = -3

Query: 1532 LRTLICSSLSSTPTTEFNITFAXXXXXXXXXPIRTATTDSNYDAESELGEQLYIPWIVRD 1353
            +RTL CS  SS+   EF+I+FA           + A+T      +     QL+IPWIVR 
Sbjct: 77   IRTLRCSVSSSSEPLEFDISFAPPKP-------KPASTRGGVSPQ-----QLFIPWIVRG 124

Query: 1352 EKGNLTLQSSPPASLLHAMA------------------NANTXXXXXXXXXXXXXXXXXS 1227
            + G L LQS PPA L+H++A                     T                  
Sbjct: 125  DDGTLKLQSQPPARLIHSLAIDATTQNPKKKEKSKKKQTQATSSSATASSSASASSPPPQ 184

Query: 1226 TEPKLSKAARRYYNENFRDPPQRLSKVLAAAGVASRRSSEELIFGGKVTVNGSVCNTPQT 1047
            + PKLSKAARR+YNENF++PPQRLSKVLAAAGVASRR+SEELIF GKVTVNG +CNTPQT
Sbjct: 185  SVPKLSKAARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNTPQT 244

Query: 1046 RVDPAKDVIYVNGSRLPKKLPPKVYLALNKPKGYICSAGEKETKSALSLFDDYLKSWGKK 867
            RVDP++D+IYVNG+R+PKKLPPKVY ALNKPKGYICS+GEKE KS +SLFD+Y+ SW K+
Sbjct: 245  RVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEVKSVISLFDEYMASWDKR 304

Query: 866  NPGLPKPRLFTVGRLDVATTGLIIVTNDGEFAHNLSHPSSNLSKEYIATVDSSVSKQQLM 687
            NPG PKPRLFTVGRLDVATTGLIIVTNDG+FA  LSHPSS+L KEYI TV   + K+ LM
Sbjct: 305  NPGTPKPRLFTVGRLDVATTGLIIVTNDGDFAQQLSHPSSSLPKEYITTVVGDIHKRHLM 364

Query: 686  AIGEGTVIEGVHCTPDLVELLPRQPDISRPRIRIVVHEGRNHEVRELVKHAGLQIHALKR 507
            AI EGT++EGVHC PDLVEL+P+Q DI R R+RIVVHEGRNHEVRELVK+AGL +H+LKR
Sbjct: 365  AISEGTIVEGVHCVPDLVELMPKQHDIPRARLRIVVHEGRNHEVRELVKNAGLVVHSLKR 424

Query: 506  VRIGGFRLPSDLGIGKYLELKTANLRALGWK 414
            VRIGGFRLPSDLG+GK+ ELK + L+ LGWK
Sbjct: 425  VRIGGFRLPSDLGLGKHAELKQSELKVLGWK 455


>ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsis thaliana]
            gi|21617894|gb|AAM66944.1| unknown [Arabidopsis thaliana]
            gi|26450440|dbj|BAC42334.1| unknown protein [Arabidopsis
            thaliana] gi|330254545|gb|AEC09639.1| pseudouridine
            synthase family protein [Arabidopsis thaliana]
          Length = 410

 Score =  475 bits (1222), Expect = e-131
 Identities = 247/392 (63%), Positives = 296/392 (75%), Gaps = 18/392 (4%)
 Frame = -3

Query: 1532 LRTLICS-SLSSTPTTEFNITFAXXXXXXXXXPIRTATTDSNYDAESELGEQLYIPWIVR 1356
            +RTL CS S SS+   EF+I+FA           + ++T      +     QL+IPWIVR
Sbjct: 31   IRTLRCSVSSSSSEPIEFDISFAPPKP-------KPSSTHGGVTPQ-----QLFIPWIVR 78

Query: 1355 DEKGNLTLQSSPPASLLHAMA-NANTXXXXXXXXXXXXXXXXXST--------------- 1224
             + G L LQS PPA L+H +A +A T                 S+               
Sbjct: 79   SDDGTLKLQSQPPARLIHNLAIDATTQNPKKKDKSKKKQPQATSSSSATTTASSPASHSE 138

Query: 1223 -EPKLSKAARRYYNENFRDPPQRLSKVLAAAGVASRRSSEELIFGGKVTVNGSVCNTPQT 1047
             +PKLSKAARR+YNENF++ PQRLSKVLAAAGVASRR+SEELIF GKVTVNG +CNTPQT
Sbjct: 139  VKPKLSKAARRFYNENFKEQPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNTPQT 198

Query: 1046 RVDPAKDVIYVNGSRLPKKLPPKVYLALNKPKGYICSAGEKETKSALSLFDDYLKSWGKK 867
            RVDP++D+IYVNG+R+PKKLPPKVY ALNKPKGYICS+GEKE KSA+SLFD+YL SW K+
Sbjct: 199  RVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEIKSAISLFDEYLSSWDKR 258

Query: 866  NPGLPKPRLFTVGRLDVATTGLIIVTNDGEFAHNLSHPSSNLSKEYIATVDSSVSKQQLM 687
            NPG PKPRLFTVGRLDVATTGLI+VTNDG+FA  LSHPSS+L KEYI TV   + K+ LM
Sbjct: 259  NPGTPKPRLFTVGRLDVATTGLIVVTNDGDFAQKLSHPSSSLPKEYITTVVGDIHKRHLM 318

Query: 686  AIGEGTVIEGVHCTPDLVELLPRQPDISRPRIRIVVHEGRNHEVRELVKHAGLQIHALKR 507
            AI EGT++EGVHC PD VEL+P+Q DI R R+RIVVHEGRNHEVRELVK+AGL++H+LKR
Sbjct: 319  AISEGTMVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVRELVKNAGLEVHSLKR 378

Query: 506  VRIGGFRLPSDLGIGKYLELKTANLRALGWKS 411
            VRIGGFRLPSDLG+GK++ELK + L+ALGWK+
Sbjct: 379  VRIGGFRLPSDLGLGKHVELKQSELKALGWKN 410


>ref|XP_002879786.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297325625|gb|EFH56045.1| pseudouridine
            synthase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 412

 Score =  474 bits (1221), Expect = e-131
 Identities = 245/394 (62%), Positives = 290/394 (73%), Gaps = 20/394 (5%)
 Frame = -3

Query: 1532 LRTLICS--SLSSTPTTEFNITFAXXXXXXXXXPIRTATTDSNYDAESELGEQLYIPWIV 1359
            +RTL CS  S SS+   EF+I+FA           R   T           +QL+IPWIV
Sbjct: 31   IRTLRCSVSSSSSSEPIEFDISFAPPKPKPSST--RGGATP----------QQLFIPWIV 78

Query: 1358 RDEKGNLTLQSSPPASLLHAMA------------------NANTXXXXXXXXXXXXXXXX 1233
            R + G L LQS PPA L+H +A                     T                
Sbjct: 79   RGDDGTLKLQSQPPARLIHNLAIDATTQNPKKKDKPKKKQPQATSSSASATASASSPASH 138

Query: 1232 XSTEPKLSKAARRYYNENFRDPPQRLSKVLAAAGVASRRSSEELIFGGKVTVNGSVCNTP 1053
               +PKLSKAARR+YNENF++PPQRLSKVLAAAGVASRR+SEELIF GKVTVNG +CNTP
Sbjct: 139  SEVKPKLSKAARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNTP 198

Query: 1052 QTRVDPAKDVIYVNGSRLPKKLPPKVYLALNKPKGYICSAGEKETKSALSLFDDYLKSWG 873
            QTRVDP++D+IYVNG+R+PKKLPPKVY ALNKPKGYICS+GEKE KS +SLFD+YL SW 
Sbjct: 199  QTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEIKSVISLFDEYLSSWD 258

Query: 872  KKNPGLPKPRLFTVGRLDVATTGLIIVTNDGEFAHNLSHPSSNLSKEYIATVDSSVSKQQ 693
            K+NPG PKPRLFTVGRLDVATTGLI+VTNDG+FA  LSHPSS+L KEYI TV   + K+ 
Sbjct: 259  KRNPGTPKPRLFTVGRLDVATTGLIVVTNDGDFAQKLSHPSSSLPKEYITTVVGDIHKRH 318

Query: 692  LMAIGEGTVIEGVHCTPDLVELLPRQPDISRPRIRIVVHEGRNHEVRELVKHAGLQIHAL 513
            LMAI EGT++EGVHC PD VEL+P+Q DI R R+RIVVHEGRNHEVRELVK+AGL++H+L
Sbjct: 319  LMAISEGTIVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVRELVKNAGLEVHSL 378

Query: 512  KRVRIGGFRLPSDLGIGKYLELKTANLRALGWKS 411
            KRVRIGGFRLPSDLG+GK++ELK + L+A+GWK+
Sbjct: 379  KRVRIGGFRLPSDLGLGKHVELKQSELKAMGWKN 412


>gb|ESW15747.1| hypothetical protein PHAVU_007G098900g [Phaseolus vulgaris]
          Length = 403

 Score =  471 bits (1213), Expect = e-130
 Identities = 253/391 (64%), Positives = 286/391 (73%), Gaps = 8/391 (2%)
 Frame = -3

Query: 1559 TLTRANHRHLRTLICSSLSSTPTTEFNITFAXXXXXXXXXPIRTATTDSNYDAESELGEQ 1380
            TL+ A+ R L  L CS  SS     FNI+FA          +       + D  +E    
Sbjct: 21   TLSLASFRILPRLTCSFSSSI---NFNISFAPPKPKPKPNNLHP-----HPDLSNEPDGP 72

Query: 1379 LYIPWIVRDEKGNLTLQSSPPASLLHAMANANTXXXXXXXXXXXXXXXXXSTE------- 1221
            L IPWIVR E GNL LQS PP SLL+A+A A T                   +       
Sbjct: 73   LLIPWIVRGEDGNLKLQSEPPPSLLNAIATAQTGTRKDSNQKTKTTAATTKPQKIRATAP 132

Query: 1220 PKLSKAARRYYNENFRDPP-QRLSKVLAAAGVASRRSSEELIFGGKVTVNGSVCNTPQTR 1044
            P+ SKAARR+YN+N ++    RLSKVLAA+GVASRRS EELIF GKVTVNGSVCNTPQTR
Sbjct: 133  PQHSKAARRFYNQNIKESSGARLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTR 192

Query: 1043 VDPAKDVIYVNGSRLPKKLPPKVYLALNKPKGYICSAGEKETKSALSLFDDYLKSWGKKN 864
            VDPAKDVIYVNG+RLPK+ P KVYLALNKPKGYICS+GE E+KS +SLFDD+L +WGKK 
Sbjct: 193  VDPAKDVIYVNGNRLPKRQPQKVYLALNKPKGYICSSGENESKSVISLFDDFLNTWGKKR 252

Query: 863  PGLPKPRLFTVGRLDVATTGLIIVTNDGEFAHNLSHPSSNLSKEYIATVDSSVSKQQLMA 684
            PG+P PRLFTVGRLDVATTGLIIVTNDG+FA  LSHPSSNLSKEYIATVD  V K+ LMA
Sbjct: 253  PGVPTPRLFTVGRLDVATTGLIIVTNDGDFAQKLSHPSSNLSKEYIATVDGLVYKRHLMA 312

Query: 683  IGEGTVIEGVHCTPDLVELLPRQPDISRPRIRIVVHEGRNHEVRELVKHAGLQIHALKRV 504
            I EGT IEGVHC PD VE+LPRQ D+ R RIRIVVHEGR HEVRELVK+AGL+IH+LKR+
Sbjct: 313  ISEGTTIEGVHCVPDAVEILPRQADMQRARIRIVVHEGRKHEVRELVKNAGLEIHSLKRI 372

Query: 503  RIGGFRLPSDLGIGKYLELKTANLRALGWKS 411
            RIGGFRLP DLG+GKY+EL   NL ALGWKS
Sbjct: 373  RIGGFRLPPDLGLGKYIELNPTNLNALGWKS 403


>emb|CBI31423.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  469 bits (1206), Expect = e-129
 Identities = 226/271 (83%), Positives = 253/271 (93%)
 Frame = -3

Query: 1223 EPKLSKAARRYYNENFRDPPQRLSKVLAAAGVASRRSSEELIFGGKVTVNGSVCNTPQTR 1044
            EPK SKAARR+YNENFRDPPQRLSKVLAAAGVASRR+SEELIF G+VTVNGSVCNTPQTR
Sbjct: 26   EPKYSKAARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQTR 85

Query: 1043 VDPAKDVIYVNGSRLPKKLPPKVYLALNKPKGYICSAGEKETKSALSLFDDYLKSWGKKN 864
            VDPA+D+IYVNG+RLPKKLPPKVYLALNKPKGYICS+GEKE+KS L LFDDYLKSW K+N
Sbjct: 86   VDPARDMIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKESKSVLCLFDDYLKSWNKQN 145

Query: 863  PGLPKPRLFTVGRLDVATTGLIIVTNDGEFAHNLSHPSSNLSKEYIATVDSSVSKQQLMA 684
            PG+PKPR+FTVGRLDVATTGLII+TNDG+FA  LSHPSS LSKEYIAT+D  V+K+ L+A
Sbjct: 146  PGVPKPRIFTVGRLDVATTGLIILTNDGDFAQKLSHPSSKLSKEYIATIDGVVNKRHLIA 205

Query: 683  IGEGTVIEGVHCTPDLVELLPRQPDISRPRIRIVVHEGRNHEVRELVKHAGLQIHALKRV 504
            I EGTVIEGVHCTPD VELLP QP+IS+PR+R+VVHEGRNHEVRELVK AGLQIH+LKR+
Sbjct: 206  ISEGTVIEGVHCTPDSVELLPPQPNISKPRLRVVVHEGRNHEVRELVKSAGLQIHSLKRI 265

Query: 503  RIGGFRLPSDLGIGKYLELKTANLRALGWKS 411
            RIGGFRLPSDLG GK++ELK  +L+ALGWKS
Sbjct: 266  RIGGFRLPSDLGHGKHVELKQGDLKALGWKS 296


>ref|XP_004496237.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Cicer arietinum]
          Length = 410

 Score =  457 bits (1175), Expect = e-126
 Identities = 244/378 (64%), Positives = 277/378 (73%), Gaps = 8/378 (2%)
 Frame = -3

Query: 1529 RTLICSSLSSTPTTEFNITFAXXXXXXXXXPIRTATTDSNYDAESELGEQLYIPWIVRDE 1350
            RTL   + SS+P  +FNI+F+         P     + + +  ++E   QL IPWIVR E
Sbjct: 27   RTLPRFTCSSSPF-KFNISFSPSKPKPNPKPEPQTESPNQFPDDNE--GQLIIPWIVRGE 83

Query: 1349 KGNLTLQSSPPASLLHAMANANTXXXXXXXXXXXXXXXXXSTE--------PKLSKAARR 1194
             GN  L S PP S L AMAN  T                   E        P+ SKAARR
Sbjct: 84   DGNFKLLSEPPPSFLKAMANDKTGTKKSDKNQTTKNKKKSENETKVRATAPPQYSKAARR 143

Query: 1193 YYNENFRDPPQRLSKVLAAAGVASRRSSEELIFGGKVTVNGSVCNTPQTRVDPAKDVIYV 1014
            +YNENF+D   RLSKVLAA+GVASRRS E+LIF GKVTVNGSVCNTPQTRVDPAKDVIYV
Sbjct: 144  FYNENFKDSGTRLSKVLAASGVASRRSCEDLIFEGKVTVNGSVCNTPQTRVDPAKDVIYV 203

Query: 1013 NGSRLPKKLPPKVYLALNKPKGYICSAGEKETKSALSLFDDYLKSWGKKNPGLPKPRLFT 834
            NGSRLPK+ P KVYLALNKPKGYICS+GEKE+KS LSLFDD+L SW KK+PG+P PRLFT
Sbjct: 204  NGSRLPKRQPHKVYLALNKPKGYICSSGEKESKSVLSLFDDFLSSWDKKHPGVPMPRLFT 263

Query: 833  VGRLDVATTGLIIVTNDGEFAHNLSHPSSNLSKEYIATVDSSVSKQQLMAIGEGTVIEGV 654
            VGRLDVATTGL+IVTNDG+FA  LSHPSSN SKEYIATV+  V K+ L AI EGT IEGV
Sbjct: 264  VGRLDVATTGLLIVTNDGDFAQRLSHPSSNFSKEYIATVNGLVHKRHLTAISEGTTIEGV 323

Query: 653  HCTPDLVELLPRQPDISRPRIRIVVHEGRNHEVRELVKHAGLQIHALKRVRIGGFRLPSD 474
            HC PD VELLP  PD  R R+RIVVH+GR HEVRELVK+AGL+IH+LKRVRIGGFRLP D
Sbjct: 324  HCVPDSVELLPSMPDAQRARLRIVVHDGRKHEVRELVKNAGLEIHSLKRVRIGGFRLPPD 383

Query: 473  LGIGKYLELKTANLRALG 420
            LG+GKY+EL    L+ALG
Sbjct: 384  LGLGKYIELNPTKLKALG 401


>gb|EPS61841.1| hypothetical protein M569_12954, partial [Genlisea aurea]
          Length = 273

 Score =  451 bits (1159), Expect = e-124
 Identities = 217/270 (80%), Positives = 245/270 (90%)
 Frame = -3

Query: 1223 EPKLSKAARRYYNENFRDPPQRLSKVLAAAGVASRRSSEELIFGGKVTVNGSVCNTPQTR 1044
            EPK SKAARR+YNE FR+PPQRL+KVLA+AGVASRRS EELIF GKV+VNGSVC TPQTR
Sbjct: 1    EPKFSKAARRFYNERFREPPQRLAKVLASAGVASRRSCEELIFQGKVSVNGSVCKTPQTR 60

Query: 1043 VDPAKDVIYVNGSRLPKKLPPKVYLALNKPKGYICSAGEKETKSALSLFDDYLKSWGKKN 864
            VDP +DVIYVNG RL KKLPPKVYLALNKPKGYICS GEKETKS +SL DD+ KSW ++N
Sbjct: 61   VDPGQDVIYVNGCRLAKKLPPKVYLALNKPKGYICSVGEKETKSVISLLDDFTKSWRRRN 120

Query: 863  PGLPKPRLFTVGRLDVATTGLIIVTNDGEFAHNLSHPSSNLSKEYIATVDSSVSKQQLMA 684
            PG+P+PRLFTVGRLDVAT+GLIIVTNDGEFA+ +SHPSSNLSKEYIAT++ +VSKQ L+ 
Sbjct: 121  PGVPQPRLFTVGRLDVATSGLIIVTNDGEFANKISHPSSNLSKEYIATINGTVSKQSLLT 180

Query: 683  IGEGTVIEGVHCTPDLVELLPRQPDISRPRIRIVVHEGRNHEVRELVKHAGLQIHALKRV 504
            I +GT I+GVHCTPD VELLP QPD+S+PRIRIVVHEGR HEVRELV++AGLQIHALKRV
Sbjct: 181  ISKGTTIDGVHCTPDSVELLPPQPDVSKPRIRIVVHEGRKHEVRELVENAGLQIHALKRV 240

Query: 503  RIGGFRLPSDLGIGKYLELKTANLRALGWK 414
            RIGGFRLP DLG+GK++EL  ANLRALGWK
Sbjct: 241  RIGGFRLPRDLGLGKHVELNDANLRALGWK 270