BLASTX nr result
ID: Catharanthus23_contig00000682
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus23_contig00000682 (1374 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006347020.1| PREDICTED: 30S ribosomal protein S5, chlorop... 328 4e-87 ref|XP_004232896.1| PREDICTED: 30S ribosomal protein S5, chlorop... 326 1e-86 ref|XP_002509457.1| 30S ribosomal protein S5, putative [Ricinus ... 323 1e-85 ref|XP_002305129.1| hypothetical protein POPTR_0004s04550g [Popu... 321 4e-85 ref|XP_004134699.1| PREDICTED: 30S ribosomal protein S5, chlorop... 319 2e-84 gb|EOY28207.1| Ribosomal protein S5 family protein [Theobroma ca... 310 7e-82 ref|XP_003529335.1| PREDICTED: 30S ribosomal protein S5, chlorop... 307 6e-81 ref|XP_003542738.1| PREDICTED: 30S ribosomal protein S5, chlorop... 305 1e-80 ref|XP_004294008.1| PREDICTED: 30S ribosomal protein S5, chlorop... 306 1e-80 gb|EMJ12857.1| hypothetical protein PRUPE_ppa008978mg [Prunus pe... 303 1e-79 sp|Q9ST69.1|RR5_SPIOL RecName: Full=30S ribosomal protein S5, ch... 295 2e-77 gb|ESW31331.1| hypothetical protein PHAVU_002G229700g [Phaseolus... 294 5e-77 gb|AGV54467.1| 30S ribosomal protein S5 [Phaseolus vulgaris] 291 4e-76 ref|NP_180936.1| 30S ribosomal protein S5 [Arabidopsis thaliana]... 291 4e-76 ref|XP_006849392.1| hypothetical protein AMTR_s00160p00027870 [A... 291 6e-76 gb|EXC18094.1| 30S ribosomal protein S5 [Morus notabilis] 288 3e-75 ref|XP_006449367.1| hypothetical protein CICLE_v10016057mg [Citr... 288 3e-75 gb|EPS57449.1| hypothetical protein M569_17368, partial [Genlise... 288 5e-75 ref|XP_004505073.1| PREDICTED: LOW QUALITY PROTEIN: 30S ribosoma... 288 5e-75 ref|XP_006467770.1| PREDICTED: 30S ribosomal protein S5, chlorop... 287 6e-75 >ref|XP_006347020.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Solanum tuberosum] Length = 305 Score = 328 bits (840), Expect = 4e-87 Identities = 172/253 (67%), Positives = 190/253 (75%) Frame = -1 Query: 1083 KANSTDIDTTFFDNADPEAISTFDXXXXXXXXXXXPSFDEGPLESEDEIAKAYEEIYGPA 904 K NST +TTFFDN DPE IST+D SFD+GP+ESE+EIAKAYEE+YG A Sbjct: 54 KPNSTTAETTFFDNTDPEEISTYDPPERPEDFIEPASFDDGPMESEEEIAKAYEELYGAA 113 Query: 903 YSGETFLGNDIYVMDSKVKKTSGLGSKNKREKVKDGFEEXXXXXXXXXXXXXXXXQLHFR 724 YSGETFLGNDIY MDSKVKKT+ G K K+EK KDGF+E QLHFR Sbjct: 114 YSGETFLGNDIYAMDSKVKKTTSFG-KTKKEKAKDGFDERVVQVRRVTKVVKGGKQLHFR 172 Query: 723 AIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAK 544 A+ VQKSAVNARRN++TVPMTKYLTFPHRSDGD+GAA+ Sbjct: 173 AVVVVGDKKGQVGVGVGKAKEVIAAVQKSAVNARRNLITVPMTKYLTFPHRSDGDFGAAR 232 Query: 543 VMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEV 364 VMLRPA+PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQ+MRQFSEV Sbjct: 233 VMLRPAAPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQQMRQFSEV 292 Query: 363 AKDRGIPMEELWK 325 A++RGIPMEELWK Sbjct: 293 AQERGIPMEELWK 305 >ref|XP_004232896.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Solanum lycopersicum] Length = 305 Score = 326 bits (836), Expect = 1e-86 Identities = 171/253 (67%), Positives = 190/253 (75%) Frame = -1 Query: 1083 KANSTDIDTTFFDNADPEAISTFDXXXXXXXXXXXPSFDEGPLESEDEIAKAYEEIYGPA 904 K NST +TTFFDN DPE IST+D SFD+GP+ESE+EIAKAYEE+YG A Sbjct: 54 KPNSTTAETTFFDNTDPEEISTYDPPERPEDFIEPASFDDGPMESEEEIAKAYEELYGAA 113 Query: 903 YSGETFLGNDIYVMDSKVKKTSGLGSKNKREKVKDGFEEXXXXXXXXXXXXXXXXQLHFR 724 YSGETFLGNDIY MDSKVKKT+ G K K+EK KDGF+E QLHFR Sbjct: 114 YSGETFLGNDIYAMDSKVKKTTSFG-KTKKEKAKDGFDERVVQVRRVTKVVKGGKQLHFR 172 Query: 723 AIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAK 544 A+ VQKSAVNARRN++TVPMTKYLTFPHRS+GD+GAA+ Sbjct: 173 AVVVVGDKKGQVGVGVGKAKEVIAAVQKSAVNARRNLITVPMTKYLTFPHRSEGDFGAAR 232 Query: 543 VMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEV 364 VMLRPA+PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQ+MRQFSEV Sbjct: 233 VMLRPAAPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQQMRQFSEV 292 Query: 363 AKDRGIPMEELWK 325 A++RGIPMEELWK Sbjct: 293 AQERGIPMEELWK 305 >ref|XP_002509457.1| 30S ribosomal protein S5, putative [Ricinus communis] gi|223549356|gb|EEF50844.1| 30S ribosomal protein S5, putative [Ricinus communis] Length = 309 Score = 323 bits (828), Expect = 1e-85 Identities = 170/252 (67%), Positives = 189/252 (75%) Frame = -1 Query: 1080 ANSTDIDTTFFDNADPEAISTFDXXXXXXXXXXXPSFDEGPLESEDEIAKAYEEIYGPAY 901 A+S+DIDTTFFDN +PE FD PSFDE P+E+E+EIA AYE++YG Y Sbjct: 58 ASSSDIDTTFFDNLNPEDDIVFDPPTPPEDFVPPPSFDEEPMETEEEIAAAYEDLYGAGY 117 Query: 900 SGETFLGNDIYVMDSKVKKTSGLGSKNKREKVKDGFEEXXXXXXXXXXXXXXXXQLHFRA 721 SG ++LGND+YVMDSKVKKT+G GSK KREK++DGFEE QLHFRA Sbjct: 118 SGVSYLGNDVYVMDSKVKKTTGFGSKGKREKIRDGFEERVVQVRRVTKVVKGGKQLHFRA 177 Query: 720 IXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKV 541 I VQKSAVNARRNI+TVPMTKYLTFPHRSDGDYGAAKV Sbjct: 178 IVVVGDKQGQVGVGVGKAKEVIAAVQKSAVNARRNIITVPMTKYLTFPHRSDGDYGAAKV 237 Query: 540 MLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEVA 361 MLRPASPGTGVIAGGAVRIVLEMAGVENALGKQ+GS NALNNARATVVAVQKMRQFS+VA Sbjct: 238 MLRPASPGTGVIAGGAVRIVLEMAGVENALGKQIGSKNALNNARATVVAVQKMRQFSDVA 297 Query: 360 KDRGIPMEELWK 325 ++RGIPMEELWK Sbjct: 298 RERGIPMEELWK 309 >ref|XP_002305129.1| hypothetical protein POPTR_0004s04550g [Populus trichocarpa] gi|118487850|gb|ABK95748.1| unknown [Populus trichocarpa] gi|222848093|gb|EEE85640.1| hypothetical protein POPTR_0004s04550g [Populus trichocarpa] Length = 311 Score = 321 bits (823), Expect = 4e-85 Identities = 170/253 (67%), Positives = 190/253 (75%) Frame = -1 Query: 1083 KANSTDIDTTFFDNADPEAISTFDXXXXXXXXXXXPSFDEGPLESEDEIAKAYEEIYGPA 904 KANS+DIDT+FFDN +PE +D PSFDEGP+E+E+EIA AYEE+YGPA Sbjct: 59 KANSSDIDTSFFDNLNPEEEFVYDPPTPPEDYIPPPSFDEGPIETEEEIAAAYEELYGPA 118 Query: 903 YSGETFLGNDIYVMDSKVKKTSGLGSKNKREKVKDGFEEXXXXXXXXXXXXXXXXQLHFR 724 YSG + LG DIYVMDSKVKKTSG GS+ K+EK+KDGF+E QLHFR Sbjct: 119 YSGVSVLGKDIYVMDSKVKKTSGWGSRVKKEKIKDGFDERVVQVRRVTKVVKGGKQLHFR 178 Query: 723 AIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAK 544 A+ VQKSA+NARRNI+TVPMTKYLTFPHRS+GD+GAAK Sbjct: 179 AVVIVGDKQGRVGVGVGKAKEVIVAVQKSALNARRNIITVPMTKYLTFPHRSEGDFGAAK 238 Query: 543 VMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEV 364 VMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQL S NALNNARATVVAVQKMRQFSEV Sbjct: 239 VMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLRSKNALNNARATVVAVQKMRQFSEV 298 Query: 363 AKDRGIPMEELWK 325 A++RGIPMEELWK Sbjct: 299 ARERGIPMEELWK 311 >ref|XP_004134699.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Cucumis sativus] gi|449479289|ref|XP_004155560.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Cucumis sativus] Length = 307 Score = 319 bits (817), Expect = 2e-84 Identities = 169/253 (66%), Positives = 187/253 (73%) Frame = -1 Query: 1083 KANSTDIDTTFFDNADPEAISTFDXXXXXXXXXXXPSFDEGPLESEDEIAKAYEEIYGPA 904 +A S+DIDTTFFDN +P+ +D PSFDEGP+E+E+EIA YEEIYGPA Sbjct: 55 RAKSSDIDTTFFDNVNPQEDIVYDPPEVPEGFVPPPSFDEGPIETEEEIAAGYEEIYGPA 114 Query: 903 YSGETFLGNDIYVMDSKVKKTSGLGSKNKREKVKDGFEEXXXXXXXXXXXXXXXXQLHFR 724 YSG + LGNDIYVMDSKVKK G GSK K++K +DGF+E QLHFR Sbjct: 115 YSGVSVLGNDIYVMDSKVKKAGGFGSKAKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFR 174 Query: 723 AIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAK 544 AI VQKSAVNARRNIVTVPMTKYLTFPHRS+GDYGAAK Sbjct: 175 AIVVVGDKQGQVGVGVGKAKEVITAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAK 234 Query: 543 VMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEV 364 VMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKM+QF +V Sbjct: 235 VMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDV 294 Query: 363 AKDRGIPMEELWK 325 A++RGIPMEELWK Sbjct: 295 AQERGIPMEELWK 307 >gb|EOY28207.1| Ribosomal protein S5 family protein [Theobroma cacao] Length = 303 Score = 310 bits (795), Expect = 7e-82 Identities = 167/252 (66%), Positives = 186/252 (73%) Frame = -1 Query: 1080 ANSTDIDTTFFDNADPEAISTFDXXXXXXXXXXXPSFDEGPLESEDEIAKAYEEIYGPAY 901 A ++DIDT+FFDN +PE FD PSFD+GP E+EDEIA AYEE+YGPAY Sbjct: 53 AKASDIDTSFFDNVNPEEDVVFDPPTPPEGFTPPPSFDDGPDETEDEIAAAYEELYGPAY 112 Query: 900 SGETFLGNDIYVMDSKVKKTSGLGSKNKREKVKDGFEEXXXXXXXXXXXXXXXXQLHFRA 721 SG + LGND+YVMDSKVKKTS G K K+EKV+DGFEE QLHFRA Sbjct: 113 SGFSVLGNDVYVMDSKVKKTSAFG-KVKKEKVRDGFEERVVQVRRVTKVVKGGKQLHFRA 171 Query: 720 IXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKV 541 I VQKSAVNARRN++TVPMTKYLTFPHRS+GD+GAAKV Sbjct: 172 IVVVGDKQGQVGVGVGKAKEVIAAVQKSAVNARRNLITVPMTKYLTFPHRSEGDFGAAKV 231 Query: 540 MLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEVA 361 MLRPASPGTGVIAGGAVRIVLEMAGVENALGKQ+GS NALNNARATVVAVQKMRQF +VA Sbjct: 232 MLRPASPGTGVIAGGAVRIVLEMAGVENALGKQIGSKNALNNARATVVAVQKMRQFRDVA 291 Query: 360 KDRGIPMEELWK 325 ++RGIPMEELWK Sbjct: 292 QERGIPMEELWK 303 >ref|XP_003529335.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine max] Length = 300 Score = 307 bits (787), Expect = 6e-81 Identities = 163/250 (65%), Positives = 183/250 (73%) Frame = -1 Query: 1074 STDIDTTFFDNADPEAISTFDXXXXXXXXXXXPSFDEGPLESEDEIAKAYEEIYGPAYSG 895 S DIDT+FFDN +P+ TF+ PSFD+GPLE+EDEIA AYEE+YGP YSG Sbjct: 51 SDDIDTSFFDNINPQDDITFNPPEPPEGFVAPPSFDDGPLETEDEIAAAYEELYGPGYSG 110 Query: 894 ETFLGNDIYVMDSKVKKTSGLGSKNKREKVKDGFEEXXXXXXXXXXXXXXXXQLHFRAIX 715 + LGND+YVMD+KVKK +G GS K+EKV+DGFEE QL FRA+ Sbjct: 111 VSVLGNDVYVMDAKVKKETGFGSGAKKEKVRDGFEERVVQVRRVTKVVKGGKQLRFRAVV 170 Query: 714 XXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVML 535 VQKSAVNARRNI+ VPMTKY TFPHR+DGDYGAAKVML Sbjct: 171 VVGDKKGSVGVGVGKAKEVIAAVQKSAVNARRNIIKVPMTKYSTFPHRADGDYGAAKVML 230 Query: 534 RPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEVAKD 355 RPASPGTGVIAGG+VRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKM+QF EVA++ Sbjct: 231 RPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAEE 290 Query: 354 RGIPMEELWK 325 RGIPMEELWK Sbjct: 291 RGIPMEELWK 300 >ref|XP_003542738.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine max] Length = 316 Score = 305 bits (780), Expect(2) = 1e-80 Identities = 161/250 (64%), Positives = 182/250 (72%) Frame = -1 Query: 1074 STDIDTTFFDNADPEAISTFDXXXXXXXXXXXPSFDEGPLESEDEIAKAYEEIYGPAYSG 895 S DIDT+FFDN +P+ TF+ PSFD+GPLE+EDEIA AYEE+YGP YSG Sbjct: 67 SDDIDTSFFDNINPQDDITFNPPEPPEGFVAPPSFDDGPLETEDEIAAAYEELYGPGYSG 126 Query: 894 ETFLGNDIYVMDSKVKKTSGLGSKNKREKVKDGFEEXXXXXXXXXXXXXXXXQLHFRAIX 715 + LGND+YVMD+KVKK +G GS K+EKV+DGFEE QL FRA+ Sbjct: 127 VSVLGNDVYVMDAKVKKETGFGSGAKKEKVRDGFEERVVQVRRVTKVVKGGKQLRFRAVV 186 Query: 714 XXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVML 535 VQKSAVNARRNI+ VPMTKY TFPHR+DGDYGAAKVML Sbjct: 187 VVGDKKGQVGVGVGKAKEVIAAVQKSAVNARRNIIKVPMTKYSTFPHRADGDYGAAKVML 246 Query: 534 RPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEVAKD 355 RPASPGTGVIAGG+VRIVLEMAGV+NALGKQLGSNNALNNARATV AVQKM+QF EVA++ Sbjct: 247 RPASPGTGVIAGGSVRIVLEMAGVDNALGKQLGSNNALNNARATVAAVQKMKQFREVAEE 306 Query: 354 RGIPMEELWK 325 RGIPMEELWK Sbjct: 307 RGIPMEELWK 316 Score = 24.3 bits (51), Expect(2) = 1e-80 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -2 Query: 1184 SLISSPSHKPRRPFL*PLKS 1125 SL+ PSH+P +P LKS Sbjct: 45 SLLPPPSHQPSKPLFLTLKS 64 >ref|XP_004294008.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Fragaria vesca subsp. vesca] Length = 314 Score = 306 bits (785), Expect = 1e-80 Identities = 168/252 (66%), Positives = 181/252 (71%) Frame = -1 Query: 1080 ANSTDIDTTFFDNADPEAISTFDXXXXXXXXXXXPSFDEGPLESEDEIAKAYEEIYGPAY 901 A +I+TTFFDN DPE + F+ PSFDE LE+EDEIA AYEE+YGPAY Sbjct: 64 AEQPEIETTFFDNDDPEYEAVFEPPEAPEGFVPPPSFDEESLETEDEIAAAYEELYGPAY 123 Query: 900 SGETFLGNDIYVMDSKVKKTSGLGSKNKREKVKDGFEEXXXXXXXXXXXXXXXXQLHFRA 721 SG T LGNDIYVMD+KVKK G K K+EK++DGFEE QLHFRA Sbjct: 124 SGMTVLGNDIYVMDAKVKKLGAFG-KLKKEKIRDGFEERVVQVRRVTKVVKGGKQLHFRA 182 Query: 720 IXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKV 541 I VQKSAVNARRNI+TVPMTKYLTFPHRS+GDYGAAKV Sbjct: 183 IVVVGDKQGNVGVGVGKAKEVIGAVQKSAVNARRNIITVPMTKYLTFPHRSEGDYGAAKV 242 Query: 540 MLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEVA 361 MLRPASPGTGVIAGG+VRIVLEMAGVENALGKQLGS NALNNARATVVAVQKMRQF EVA Sbjct: 243 MLRPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSKNALNNARATVVAVQKMRQFREVA 302 Query: 360 KDRGIPMEELWK 325 DRGIPMEELWK Sbjct: 303 LDRGIPMEELWK 314 >gb|EMJ12857.1| hypothetical protein PRUPE_ppa008978mg [Prunus persica] Length = 312 Score = 303 bits (775), Expect = 1e-79 Identities = 162/252 (64%), Positives = 182/252 (72%) Frame = -1 Query: 1080 ANSTDIDTTFFDNADPEAISTFDXXXXXXXXXXXPSFDEGPLESEDEIAKAYEEIYGPAY 901 A + D++T+FFDN DPE F+ PSFD+ E+EDEIA AYEE+YGPAY Sbjct: 62 AAAADVETSFFDNEDPEFDGVFEPPEVPEGFVPPPSFDDESSETEDEIAAAYEELYGPAY 121 Query: 900 SGETFLGNDIYVMDSKVKKTSGLGSKNKREKVKDGFEEXXXXXXXXXXXXXXXXQLHFRA 721 SGE+ LGNDIYVMDS VKKT G K K+EK++DGFEE QLHFRA Sbjct: 122 SGESVLGNDIYVMDSNVKKTGAFG-KLKKEKIRDGFEERVVQVRRVTKVVKGGKQLHFRA 180 Query: 720 IXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKV 541 I VQKSAVNARRNI++VPMTKYLTFPHRS+GDYGAAKV Sbjct: 181 IVVVGDKQGQVGVGVGKAKEVIGAVQKSAVNARRNIISVPMTKYLTFPHRSEGDYGAAKV 240 Query: 540 MLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEVA 361 MLRPASPGTGVIAGG+VRIVLEMAGVENALGKQLGS NALNNARATVV +QKMRQFS+VA Sbjct: 241 MLRPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSKNALNNARATVVGIQKMRQFSDVA 300 Query: 360 KDRGIPMEELWK 325 ++RGIPMEELWK Sbjct: 301 RERGIPMEELWK 312 >sp|Q9ST69.1|RR5_SPIOL RecName: Full=30S ribosomal protein S5, chloroplastic; Flags: Precursor gi|188036206|pdb|3BBN|E Chain E, Homology Model For The Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome. gi|5725342|emb|CAA63650.1| ribosomal protein S5 [Spinacia oleracea] Length = 308 Score = 295 bits (756), Expect = 2e-77 Identities = 152/248 (61%), Positives = 177/248 (71%) Frame = -1 Query: 1068 DIDTTFFDNADPEAISTFDXXXXXXXXXXXPSFDEGPLESEDEIAKAYEEIYGPAYSGET 889 DID TFF+ +P+ TFD + DE P ESE+EIA AYEE+YG AYSGE+ Sbjct: 61 DIDITFFEQDNPDEEITFDPPEKPEGYIPPRAVDEPPFESEEEIALAYEELYGAAYSGES 120 Query: 888 FLGNDIYVMDSKVKKTSGLGSKNKREKVKDGFEEXXXXXXXXXXXXXXXXQLHFRAIXXX 709 LGND+Y MDSK+KK +G GSK+K+EK++DGFEE + FRAI Sbjct: 121 LLGNDVYAMDSKIKKATGFGSKSKKEKIRDGFEENVVQVRRVTKVVKGGKHMRFRAIVVV 180 Query: 708 XXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRP 529 VQK+AV+ARRNI+TVPMTKYLTFPHR++ DYGAA+VMLRP Sbjct: 181 GDKKGQVGVGVGKAKEVVSAVQKAAVDARRNIITVPMTKYLTFPHRNEADYGAARVMLRP 240 Query: 528 ASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEVAKDRG 349 A+PGTGVIAGGAVR VLEMAGVENALGKQLGSNNALNNARAT+VAVQ MRQFS+VA+DRG Sbjct: 241 AAPGTGVIAGGAVRTVLEMAGVENALGKQLGSNNALNNARATIVAVQTMRQFSDVARDRG 300 Query: 348 IPMEELWK 325 IPMEELWK Sbjct: 301 IPMEELWK 308 >gb|ESW31331.1| hypothetical protein PHAVU_002G229700g [Phaseolus vulgaris] Length = 301 Score = 294 bits (753), Expect = 5e-77 Identities = 156/250 (62%), Positives = 177/250 (70%) Frame = -1 Query: 1074 STDIDTTFFDNADPEAISTFDXXXXXXXXXXXPSFDEGPLESEDEIAKAYEEIYGPAYSG 895 S DIDT+FFDN +P+ F+ PSFD+ PLE+EDEIA AYEE+YGPA+SG Sbjct: 52 SDDIDTSFFDNLNPQDDIDFNPPEPPEGFVAPPSFDDSPLETEDEIAAAYEELYGPAFSG 111 Query: 894 ETFLGNDIYVMDSKVKKTSGLGSKNKREKVKDGFEEXXXXXXXXXXXXXXXXQLHFRAIX 715 T LGND++ D+ VKK +G GS K+EK++DGFEE QL FRA+ Sbjct: 112 VTVLGNDVFETDALVKKDTGFGSGGKKEKIRDGFEERVVQVRRVTKVVKGGKQLRFRAVV 171 Query: 714 XXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVML 535 VQKSA NARRNI+ VPMTKY TFPHRSDGDYGAAKVML Sbjct: 172 IVGDRKGQVGVGVGKAKEVVAAVQKSAANARRNIIKVPMTKYSTFPHRSDGDYGAAKVML 231 Query: 534 RPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEVAKD 355 RPASPGTGVIAGGAVRIVLEMAGVENALGKQ+GSNNALNNARATV+AVQKM+QF EVA + Sbjct: 232 RPASPGTGVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVIAVQKMKQFREVALE 291 Query: 354 RGIPMEELWK 325 RGIPMEELWK Sbjct: 292 RGIPMEELWK 301 >gb|AGV54467.1| 30S ribosomal protein S5 [Phaseolus vulgaris] Length = 301 Score = 291 bits (745), Expect = 4e-76 Identities = 155/250 (62%), Positives = 176/250 (70%) Frame = -1 Query: 1074 STDIDTTFFDNADPEAISTFDXXXXXXXXXXXPSFDEGPLESEDEIAKAYEEIYGPAYSG 895 S DIDT+FFDN +P+ F+ PSFD+ PLE+EDEIA AYEE+YGPA+SG Sbjct: 52 SDDIDTSFFDNLNPQDDIDFNPPEPPEGFVAPPSFDDSPLETEDEIAAAYEELYGPAFSG 111 Query: 894 ETFLGNDIYVMDSKVKKTSGLGSKNKREKVKDGFEEXXXXXXXXXXXXXXXXQLHFRAIX 715 T LGND++ + VKK +G GS K+EK++DGFEE QL FRA+ Sbjct: 112 VTVLGNDVFETAALVKKDTGFGSGGKKEKIRDGFEERVVQVRRVTKVVKGGKQLRFRAVV 171 Query: 714 XXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVML 535 VQKSA NARRNI+ VPMTKY TFPHRSDGDYGAAKVML Sbjct: 172 IVGDRKGQVGVGVGKAKEVVAAVQKSAANARRNIIKVPMTKYSTFPHRSDGDYGAAKVML 231 Query: 534 RPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEVAKD 355 RPASPGTGVIAGGAVRIVLEMAGVENALGKQ+GSNNALNNARATV+AVQKM+QF EVA + Sbjct: 232 RPASPGTGVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVIAVQKMKQFREVALE 291 Query: 354 RGIPMEELWK 325 RGIPMEELWK Sbjct: 292 RGIPMEELWK 301 >ref|NP_180936.1| 30S ribosomal protein S5 [Arabidopsis thaliana] gi|75101015|sp|P93014.1|RR5_ARATH RecName: Full=30S ribosomal protein S5, chloroplastic; Flags: Precursor gi|1707008|gb|AAC69132.1| 30S ribosomal protein S5 [Arabidopsis thaliana] gi|15450886|gb|AAK96714.1| 30S ribosomal protein S5 [Arabidopsis thaliana] gi|20259882|gb|AAM13288.1| 30S ribosomal protein S5 [Arabidopsis thaliana] gi|21593322|gb|AAM65271.1| 30S ribosomal protein S5 [Arabidopsis thaliana] gi|330253794|gb|AEC08888.1| 30S ribosomal protein S5 [Arabidopsis thaliana] Length = 303 Score = 291 bits (745), Expect = 4e-76 Identities = 158/255 (61%), Positives = 182/255 (71%), Gaps = 2/255 (0%) Frame = -1 Query: 1083 KANSTDIDTTFFDNADPEAIST--FDXXXXXXXXXXXPSFDEGPLESEDEIAKAYEEIYG 910 KA+STD +T FF++ PE + FD P FDEG E+E+EIA A+EE+YG Sbjct: 49 KASSTDTETIFFEDETPEITANVVFDPPIAPEGFVSPPYFDEGSDETEEEIATAFEELYG 108 Query: 909 PAYSGETFLGNDIYVMDSKVKKTSGLGSKNKREKVKDGFEEXXXXXXXXXXXXXXXXQLH 730 PAYSGE+ LG DIYVMDSK KK+SG+G K K++K++DGFEE QL Sbjct: 109 PAYSGESMLGKDIYVMDSKHKKSSGIGGKPKKDKIRDGFEERVVQVRRVTKVVKGGKQLK 168 Query: 729 FRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGA 550 FRAI VQKSA++ARRNIV VPMTKY TFPHRS+GDYGA Sbjct: 169 FRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIVQVPMTKYSTFPHRSEGDYGA 228 Query: 549 AKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFS 370 AKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARAT+ AVQ+MRQF Sbjct: 229 AKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATLAAVQQMRQFR 288 Query: 369 EVAKDRGIPMEELWK 325 +VA++RGIPMEELWK Sbjct: 289 DVAQERGIPMEELWK 303 >ref|XP_006849392.1| hypothetical protein AMTR_s00160p00027870 [Amborella trichopoda] gi|548852953|gb|ERN10973.1| hypothetical protein AMTR_s00160p00027870 [Amborella trichopoda] Length = 306 Score = 291 bits (744), Expect = 6e-76 Identities = 159/253 (62%), Positives = 179/253 (70%) Frame = -1 Query: 1083 KANSTDIDTTFFDNADPEAISTFDXXXXXXXXXXXPSFDEGPLESEDEIAKAYEEIYGPA 904 +A +++DT+FFD DPE F+ P F E P E+E+EIA AYEEIYGPA Sbjct: 55 RAKDSNLDTSFFDELDPEQEIAFEQPSPPEGWVKPPPFYELPPETEEEIAGAYEEIYGPA 114 Query: 903 YSGETFLGNDIYVMDSKVKKTSGLGSKNKREKVKDGFEEXXXXXXXXXXXXXXXXQLHFR 724 YSGE+ LGNDIYVMD+KVKK+ G G K K+EKV+DGFEE QL FR Sbjct: 115 YSGESVLGNDIYVMDAKVKKSVGFGKK-KKEKVRDGFEERVVQVRRVTKVVKGGKQLSFR 173 Query: 723 AIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAK 544 AI V+KSA NARRNIVTVPMTKY TFPHR+DGDYGAAK Sbjct: 174 AIVVVGDKQGRVGVGVGKAKEVISAVEKSATNARRNIVTVPMTKYSTFPHRADGDYGAAK 233 Query: 543 VMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEV 364 VMLRPASPGTGVIAGG+VRIVLEMAGVENALGKQLGSNNALNNARAT+VAV MRQF +V Sbjct: 234 VMLRPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATLVAVSNMRQFRDV 293 Query: 363 AKDRGIPMEELWK 325 A++RGIPMEELWK Sbjct: 294 ARERGIPMEELWK 306 >gb|EXC18094.1| 30S ribosomal protein S5 [Morus notabilis] Length = 337 Score = 288 bits (738), Expect = 3e-75 Identities = 164/275 (59%), Positives = 183/275 (66%), Gaps = 25/275 (9%) Frame = -1 Query: 1074 STDIDTTFFDNAD-PEAISTFDXXXXXXXXXXXPSFDEGPLESEDEIAKAYEEIYGPAYS 898 S+D DT+FF + E + ++ PSFDEGP+E+EDEIA AYEE+YGPAYS Sbjct: 63 SSDSDTSFFTTDEFDEDDAVYEPPEAPEGFVAPPSFDEGPMETEDEIAAAYEELYGPAYS 122 Query: 897 GETFLGNDIYVMDSKVKKTSGLGSKNKREKVKDGFEEXXXXXXXXXXXXXXXXQLHFRAI 718 G + LGNDIYVM+SKVKKT G GS K+EK++DGFEE QLHFRAI Sbjct: 123 GVSVLGNDIYVMNSKVKKTGGFGSGAKKEKIRDGFEERVVQVRRVTKVVKGGKQLHFRAI 182 Query: 717 XXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVTVPMTKYLTFPH------------ 574 VQKSAVNARRNI+TVPMTKYLTFPH Sbjct: 183 VVVGDKKGQVGVGVGKAKEVIAAVQKSAVNARRNIITVPMTKYLTFPHSESHLVTSSHIA 242 Query: 573 ------------RSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSN 430 RS+GDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSN Sbjct: 243 FSNYIKDYPTNCRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSN 302 Query: 429 NALNNARATVVAVQKMRQFSEVAKDRGIPMEELWK 325 NALNNARATVVAV +MRQF EVA++RGIPMEELWK Sbjct: 303 NALNNARATVVAVLQMRQFREVARERGIPMEELWK 337 >ref|XP_006449367.1| hypothetical protein CICLE_v10016057mg [Citrus clementina] gi|557551978|gb|ESR62607.1| hypothetical protein CICLE_v10016057mg [Citrus clementina] Length = 305 Score = 288 bits (738), Expect = 3e-75 Identities = 159/242 (65%), Positives = 177/242 (73%) Frame = -1 Query: 1050 FDNADPEAISTFDXXXXXXXXXXXPSFDEGPLESEDEIAKAYEEIYGPAYSGETFLGNDI 871 F+N D +A + FD PSFDE P+E+EDEIA AYEE+YGPAY+G + LGND+ Sbjct: 66 FNNPDEDA-AVFDPPTPPEDYTPPPSFDELPMETEDEIAAAYEELYGPAYAGVSVLGNDV 124 Query: 870 YVMDSKVKKTSGLGSKNKREKVKDGFEEXXXXXXXXXXXXXXXXQLHFRAIXXXXXXXXX 691 YVMDSK KKTS G K K+EKVKDGFEE QL FRAI Sbjct: 125 YVMDSKAKKTSAFG-KTKKEKVKDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQ 183 Query: 690 XXXXXXXXXXXXXXVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTG 511 VQKSAV+ARRNIVTVPMTKYLTFPHRSDGD+GAAKVMLRPA+PGTG Sbjct: 184 VGVGVAKAKEVIAAVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPAAPGTG 243 Query: 510 VIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEVAKDRGIPMEEL 331 VIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKM+Q+ EV+++RGIPMEEL Sbjct: 244 VIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEEL 303 Query: 330 WK 325 WK Sbjct: 304 WK 305 >gb|EPS57449.1| hypothetical protein M569_17368, partial [Genlisea aurea] Length = 216 Score = 288 bits (736), Expect = 5e-75 Identities = 149/217 (68%), Positives = 170/217 (78%) Frame = -1 Query: 975 SFDEGPLESEDEIAKAYEEIYGPAYSGETFLGNDIYVMDSKVKKTSGLGSKNKREKVKDG 796 S DEGP+ESE+EIA AYEE+YGPAYSGE+FLGND+YVMDSK+KK++G G K+EKV+DG Sbjct: 1 SIDEGPMESEEEIAIAYEELYGPAYSGESFLGNDVYVMDSKIKKSTGFGGA-KKEKVRDG 59 Query: 795 FEEXXXXXXXXXXXXXXXXQLHFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRN 616 F+E QLHFRA+ VQKSAVNARRN Sbjct: 60 FDERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGNVGVGVGKAKEVIAAVQKSAVNARRN 119 Query: 615 IVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 436 I+TVPMTKY TFPHRS+ +YGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG Sbjct: 120 IITVPMTKYKTFPHRSEAEYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 179 Query: 435 SNNALNNARATVVAVQKMRQFSEVAKDRGIPMEELWK 325 SNNALNNARATVVAVQ+M+QFS+VA++RGIPME+LWK Sbjct: 180 SNNALNNARATVVAVQRMKQFSQVAEERGIPMEQLWK 216 >ref|XP_004505073.1| PREDICTED: LOW QUALITY PROTEIN: 30S ribosomal protein S5, chloroplastic-like [Cicer arietinum] Length = 307 Score = 288 bits (736), Expect = 5e-75 Identities = 154/251 (61%), Positives = 177/251 (70%) Frame = -1 Query: 1077 NSTDIDTTFFDNADPEAISTFDXXXXXXXXXXXPSFDEGPLESEDEIAKAYEEIYGPAYS 898 +S + D +FFD + PE TF+ PS ++GP+ESEDEIA AYEE+YG YS Sbjct: 57 SSDETDNSFFDTSVPEEDLTFNPPEIPEGFVAPPSIEDGPVESEDEIAAAYEELYGTGYS 116 Query: 897 GETFLGNDIYVMDSKVKKTSGLGSKNKREKVKDGFEEXXXXXXXXXXXXXXXXQLHFRAI 718 G + LGNDIY MDSK KK SG GS K+EK++DGFEE Q+ FRAI Sbjct: 117 GVSVLGNDIYAMDSKAKKMSGFGSGLKKEKIRDGFEERVVQVRRVTKVVKGGKQMRFRAI 176 Query: 717 XXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVM 538 VQK+A+NARRN+V VPMTKYLTFPHRSDGD GAAKVM Sbjct: 177 VVVGDKKGQVGVGVGKAKEVIAAVQKAAINARRNLVRVPMTKYLTFPHRSDGDVGAAKVM 236 Query: 537 LRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEVAK 358 LRPASPGTGVIAGG+VRIVLEMAGVENALGKQLGS+NALNNARATVVAVQ+MRQ+SEV+ Sbjct: 237 LRPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSDNALNNARATVVAVQRMRQYSEVSA 296 Query: 357 DRGIPMEELWK 325 +RGIPMEELWK Sbjct: 297 ERGIPMEELWK 307 >ref|XP_006467770.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Citrus sinensis] Length = 306 Score = 287 bits (735), Expect = 6e-75 Identities = 159/242 (65%), Positives = 176/242 (72%) Frame = -1 Query: 1050 FDNADPEAISTFDXXXXXXXXXXXPSFDEGPLESEDEIAKAYEEIYGPAYSGETFLGNDI 871 F+N D +A + FD PSFDE P+E+EDEIA AYEE+YGPAY+G + GND+ Sbjct: 67 FNNPDEDA-AVFDPPTPPEDYTPPPSFDELPMETEDEIAAAYEELYGPAYAGVSVSGNDV 125 Query: 870 YVMDSKVKKTSGLGSKNKREKVKDGFEEXXXXXXXXXXXXXXXXQLHFRAIXXXXXXXXX 691 YVMDSK KKTS G K K+EKVKDGFEE QL FRAI Sbjct: 126 YVMDSKAKKTSAFG-KTKKEKVKDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQ 184 Query: 690 XXXXXXXXXXXXXXVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTG 511 VQKSAV+ARRNIVTVPMTKYLTFPHRSDGD+GAAKVMLRPASPGTG Sbjct: 185 VGVGVAKAKEVIAAVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTG 244 Query: 510 VIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEVAKDRGIPMEEL 331 VIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKM+Q+ EV+++RGIPMEEL Sbjct: 245 VIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEEL 304 Query: 330 WK 325 WK Sbjct: 305 WK 306