BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00000354
         (2267 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   705   0.0  
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   690   0.0  
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ...   680   0.0  
gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus pe...   672   0.0  
gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao] gi|508...   667   0.0  
ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,...   651   0.0  
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   650   0.0  
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr...   640   0.0  
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,...   637   e-180
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,...   634   e-179
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]     633   e-179
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro...   629   e-177
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [...   626   e-176
ref|XP_002333134.1| predicted protein [Populus trichocarpa]           626   e-176
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,...   618   e-174
ref|XP_002331841.1| predicted protein [Populus trichocarpa]           615   e-173
ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glyci...   610   e-172
gb|ESW33340.1| hypothetical protein PHAVU_001G061400g [Phaseolus...   605   e-170
dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila]     597   e-168
ref|XP_006593758.1| PREDICTED: RNA polymerase sigma factor sigE,...   593   e-167

>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score =  705 bits (1819), Expect = 0.0
 Identities = 364/503 (72%), Positives = 415/503 (82%)
 Frame = -1

Query: 1946 GLNAKLSTRVSQQRRPSILSFKTGKTKNAALVAPQESLTLPMEISKKNEKRSRRSVRHPE 1767
            GL+++ STR+   +RP I+SFK  KTKN  L+AP+ES++L +E SK+NEKRSRR  +  E
Sbjct: 16   GLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETSKENEKRSRRVSKRSE 75

Query: 1766 RVKVISIDQETPSTLELDYNEAAAKLEHIYKRSPATSDCETELKDHEVKRGQHRRKAVEE 1587
            RV  ++I+  +PSTLELDY+EAAAKLE IYKRS  T+   TE++DH VKR    RK + E
Sbjct: 76   RVHAVAIEA-SPSTLELDYSEAAAKLESIYKRSLETASSNTEVQDHLVKRRPRTRKRIVE 134

Query: 1586 DKEEANKGTAANIVXXXXXXXXRLNLEKRIALRKKKETEIVVSSKSKKRTDHDEEGKINR 1407
              EEA K  A N+V        RLNL++RIAL K KE E+V SS+ +K  +  E+ KI++
Sbjct: 135  GDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASSERRKLKEDTEDEKIDK 194

Query: 1406 LVREYSTSTDFVSLDWKKMKIPPVLPSSEHAWLFKLMQPLKAILQVKENLQSDLGREPTD 1227
            LVREYS +TD  SLDWKKMKIPPVLPSSEH WLFKLMQP+KAILQVKENLQ+DLGREPTD
Sbjct: 195  LVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAILQVKENLQNDLGREPTD 254

Query: 1226 GELAEATNMDVVELRKKMEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAG 1047
            GE+AEATNMD  ELRKK+EVGRAARNKLIKHNLRLVLFVMNKYFQDFANG +FQDLCQAG
Sbjct: 255  GEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGSRFQDLCQAG 314

Query: 1046 VKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQKAKLE 867
            VKGLITAIDRFEP R FRLSTYGLFWIRHAIIRSMT SSFTKV FGLES+RVEIQKAKLE
Sbjct: 315  VKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFGLESIRVEIQKAKLE 374

Query: 866  LLFELHRMPTEEEIIERVGISPERYHEVMRASKPIISLHSRHSVTQEEFINGITDVDGVE 687
            LLFEL R+PT+EEII RVG+SPERYHEVM+ SKP+ SLH+R+  TQEE INGITDVDGV+
Sbjct: 375  LLFELQRIPTDEEIIRRVGLSPERYHEVMKVSKPVSSLHARNKTTQEELINGITDVDGVD 434

Query: 686  GGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 507
             GDKR+QPA            LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK
Sbjct: 435  -GDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 493

Query: 506  HEVKALMKLKHPARVDYLRRYVY 438
            HEVKALMKLKHP RVDY+RRY++
Sbjct: 494  HEVKALMKLKHPTRVDYVRRYIF 516


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform 1 [Solanum
            lycopersicum]
          Length = 516

 Score =  690 bits (1780), Expect = 0.0
 Identities = 357/503 (70%), Positives = 408/503 (81%)
 Frame = -1

Query: 1946 GLNAKLSTRVSQQRRPSILSFKTGKTKNAALVAPQESLTLPMEISKKNEKRSRRSVRHPE 1767
            GL+++ S R+   +RP I+SFK   TKN  LV+P+ES++ P+E SK+NEKRSRR  +  E
Sbjct: 16   GLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETSKENEKRSRRVSKRTE 75

Query: 1766 RVKVISIDQETPSTLELDYNEAAAKLEHIYKRSPATSDCETELKDHEVKRGQHRRKAVEE 1587
            RV  ++I+   PSTLELDY+EAAAKLE IYKRS  T+   TE+KDH VKR    RK + E
Sbjct: 76   RVHAVTIEAP-PSTLELDYSEAAAKLESIYKRSLETASPNTEVKDHLVKRRPRTRKRIVE 134

Query: 1586 DKEEANKGTAANIVXXXXXXXXRLNLEKRIALRKKKETEIVVSSKSKKRTDHDEEGKINR 1407
              EEA K    N+V        RLNL++RIAL K KE +++ SS+ +K  +  E+ KI++
Sbjct: 135  SDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSERRKLNEDTEDEKIDK 194

Query: 1406 LVREYSTSTDFVSLDWKKMKIPPVLPSSEHAWLFKLMQPLKAILQVKENLQSDLGREPTD 1227
            LVREYS +TD  SLDWKKMKIPPVLPSSEH WLFKLMQP+KAILQVKENLQ+DLGREPTD
Sbjct: 195  LVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQVKENLQNDLGREPTD 254

Query: 1226 GELAEATNMDVVELRKKMEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAG 1047
            GE+AEATNMD  ELRKK+E GRAARNKLIKHNLRLVLFVMNKYFQDFAN  +FQDLCQAG
Sbjct: 255  GEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQDFANASRFQDLCQAG 314

Query: 1046 VKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQKAKLE 867
            VKGLITAIDRFEP R FRLSTYGLFWIRHAIIR MT SSFTKV FGLES+RVEIQKAKLE
Sbjct: 315  VKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVPFGLESIRVEIQKAKLE 374

Query: 866  LLFELHRMPTEEEIIERVGISPERYHEVMRASKPIISLHSRHSVTQEEFINGITDVDGVE 687
            LLFEL R+PT++EII+RVG SPERYHEVM+ SKPI SLH+R+  TQEE INGITDVDGV+
Sbjct: 375  LLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTTQEELINGITDVDGVD 434

Query: 686  GGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 507
             GDKR+QPA            LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK
Sbjct: 435  -GDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 493

Query: 506  HEVKALMKLKHPARVDYLRRYVY 438
            HEVKALMKLKHP RVDY+RRY++
Sbjct: 494  HEVKALMKLKHPTRVDYVRRYIF 516


>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  680 bits (1754), Expect = 0.0
 Identities = 353/503 (70%), Positives = 411/503 (81%)
 Frame = -1

Query: 1946 GLNAKLSTRVSQQRRPSILSFKTGKTKNAALVAPQESLTLPMEISKKNEKRSRRSVRHPE 1767
            GLNAK S   +  RRP +L+FK  K KN ALV P E + LP+E SK ++KR RR+ +  +
Sbjct: 18   GLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIETSKDHKKRLRRASKPSK 77

Query: 1766 RVKVISIDQETPSTLELDYNEAAAKLEHIYKRSPATSDCETELKDHEVKRGQHRRKAVEE 1587
            RVK +S D+ +P ++ELDYNEAAAKLE+IYK SPAT   E E  +  V+RG+ RRK V  
Sbjct: 78   RVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAEDLERVVRRGRQRRKRVTL 137

Query: 1586 DKEEANKGTAANIVXXXXXXXXRLNLEKRIALRKKKETEIVVSSKSKKRTDHDEEGKINR 1407
              ++A K  + N+V        RL+LEKRIAL K K+ E  V+S  KKR   +E+  I+ 
Sbjct: 138  ADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQ-EKAVASIQKKRDSKNEDENIDV 196

Query: 1406 LVREYSTSTDFVSLDWKKMKIPPVLPSSEHAWLFKLMQPLKAILQVKENLQSDLGREPTD 1227
            LVREYS STD VSLDWKKMKIPPVLP SEHAWLFKLMQP+K +L+VK+NLQ DLGREPTD
Sbjct: 197  LVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGLLEVKDNLQKDLGREPTD 256

Query: 1226 GELAEATNMDVVELRKKMEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAG 1047
            GELAEA +M  V++R+ MEVG+AARNKLIKHNLRLVLFV+NKYFQ+FANGPKFQDLCQAG
Sbjct: 257  GELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKYFQEFANGPKFQDLCQAG 316

Query: 1046 VKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQKAKLE 867
            VKGLITAIDRFEPKRSFRLSTYGLFWIRHAI+RSMTLSSFT+VSFGLESVRVEIQ+AKLE
Sbjct: 317  VKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRVSFGLESVRVEIQRAKLE 376

Query: 866  LLFELHRMPTEEEIIERVGISPERYHEVMRASKPIISLHSRHSVTQEEFINGITDVDGVE 687
            LLF+L R+PTEEEIIE+VGISPERYHEVMRASK ++SLH+RH+ TQEE+INGITDV+GV 
Sbjct: 377  LLFKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLSLHARHATTQEEYINGITDVEGV- 435

Query: 686  GGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 507
            GGD+ RQ A            LKPKESLV+RQRYGLDGKGDRTLGEIAGNL+ISREMVRK
Sbjct: 436  GGDRGRQLALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGEIAGNLSISREMVRK 495

Query: 506  HEVKALMKLKHPARVDYLRRYVY 438
            HEVKALMKLKHPARVDYLR+Y++
Sbjct: 496  HEVKALMKLKHPARVDYLRQYIF 518


>gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  672 bits (1733), Expect = 0.0
 Identities = 351/504 (69%), Positives = 409/504 (81%), Gaps = 2/504 (0%)
 Frame = -1

Query: 1946 GLNAKLSTRVSQQRRPSILSFKTGKTKNAALVAPQESLTLPMEISKKNEKRSRRSVRHPE 1767
            GL+ KL+ + S  R+P I++FKT +    ALVAPQE + LP+E  KK++KR  ++ +  +
Sbjct: 16   GLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETRKKHQKRLGKARKLAK 75

Query: 1766 RVKVISIDQETPSTLELDYNEAAAKLEHIYKRSPAT-SDCETELKDHEVKRGQHRRKAVE 1590
             VK  + D  +P TLE+DYNEAAAKLE++YKRSP T ++ + E  D  ++RG+ RRK   
Sbjct: 76   SVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDVDGLMRRGRKRRKKTS 135

Query: 1589 E-DKEEANKGTAANIVXXXXXXXXRLNLEKRIALRKKKETEIVVSSKSKKRTDHDEEGKI 1413
            E D ++    T+  +V        RL+L KR+AL+  K+ +++ S   K+++  +E  KI
Sbjct: 136  ESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISSIVRKRKSRKNENEKI 195

Query: 1412 NRLVREYSTSTDFVSLDWKKMKIPPVLPSSEHAWLFKLMQPLKAILQVKENLQSDLGREP 1233
              LVREYSTSTD VSLDWKKMKIPPVL SSEHAWLFKLMQP+K +L+VKENLQ DLGREP
Sbjct: 196  EELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGLLEVKENLQKDLGREP 255

Query: 1232 TDGELAEATNMDVVELRKKMEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQ 1053
            T+GELAEATNM VV+++K +EVGRAAR+KLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQ
Sbjct: 256  TNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQ 315

Query: 1052 AGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQKAK 873
            AGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFT+VSFGLESVR EIQKAK
Sbjct: 316  AGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAK 375

Query: 872  LELLFELHRMPTEEEIIERVGISPERYHEVMRASKPIISLHSRHSVTQEEFINGITDVDG 693
            L +LF L RMPTE+EIIE+VGISPERYHEVMRASKP+ SLHSRH+ TQEEFINGITDVDG
Sbjct: 376  LGMLFALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHSRHTTTQEEFINGITDVDG 435

Query: 692  VEGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMV 513
            VE GD R++PA            LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMV
Sbjct: 436  VE-GDNRQKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMV 494

Query: 512  RKHEVKALMKLKHPARVDYLRRYV 441
            RKHEVKALMKLKHPARVDYLRRYV
Sbjct: 495  RKHEVKALMKLKHPARVDYLRRYV 518


>gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao]
            gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
            [Theobroma cacao]
          Length = 516

 Score =  667 bits (1720), Expect = 0.0
 Identities = 346/502 (68%), Positives = 402/502 (80%)
 Frame = -1

Query: 1946 GLNAKLSTRVSQQRRPSILSFKTGKTKNAALVAPQESLTLPMEISKKNEKRSRRSVRHPE 1767
            GL+ K ST+    RRP  ++FK  K+ N ALV PQE + LP+E +K++ KR  ++ + P+
Sbjct: 16   GLSTKFSTQRCTSRRPLTVAFKADKSDNTALVTPQEHILLPIETAKEHPKRRGKAKKDPK 75

Query: 1766 RVKVISIDQETPSTLELDYNEAAAKLEHIYKRSPATSDCETELKDHEVKRGQHRRKAVEE 1587
             V  +  D  +P TLE+DYNEAAAKLE+IYK SPAT   + E  + ++K  + RRK  +E
Sbjct: 76   IVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEVEGKIKGRRQRRKRSKE 135

Query: 1586 DKEEANKGTAANIVXXXXXXXXRLNLEKRIALRKKKETEIVVSSKSKKRTDHDEEGKINR 1407
              E+        +V        RL+L+ RIAL+K +E + VVS + KK ++++ E KI+R
Sbjct: 136  SDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPVVSVRRKKSSENESE-KIDR 194

Query: 1406 LVREYSTSTDFVSLDWKKMKIPPVLPSSEHAWLFKLMQPLKAILQVKENLQSDLGREPTD 1227
            LVR+YS STD VSLDW+KMKIPPVLPS EH WLFKLMQP+KA+LQ KENLQ DLGR+PT+
Sbjct: 195  LVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQAKENLQKDLGRDPTE 254

Query: 1226 GELAEATNMDVVELRKKMEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAG 1047
             ELAEATNM   ++RK +EVG+AARNKLIKHNLRLVLF +NKYFQDFANGP+FQDLCQAG
Sbjct: 255  DELAEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSINKYFQDFANGPRFQDLCQAG 314

Query: 1046 VKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQKAKLE 867
            VKGLITAIDRFEP+R FRLSTY LFWIRHAIIRSMTLSSFT+VSFGLESVRVEIQ+AKLE
Sbjct: 315  VKGLITAIDRFEPRRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSFGLESVRVEIQRAKLE 374

Query: 866  LLFELHRMPTEEEIIERVGISPERYHEVMRASKPIISLHSRHSVTQEEFINGITDVDGVE 687
            LLFELHR PTEEEII++VGISPERY EVMRASKP+ SLHSRHSVTQEEFINGITD+DGV 
Sbjct: 375  LLFELHREPTEEEIIKKVGISPERYQEVMRASKPVASLHSRHSVTQEEFINGITDIDGV- 433

Query: 686  GGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 507
            GGD RRQPA            LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK
Sbjct: 434  GGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 493

Query: 506  HEVKALMKLKHPARVDYLRRYV 441
            HEVKALMKLKHPARVDYLRRYV
Sbjct: 494  HEVKALMKLKHPARVDYLRRYV 515


>ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform 2 [Solanum
            lycopersicum]
          Length = 487

 Score =  651 bits (1680), Expect = 0.0
 Identities = 345/503 (68%), Positives = 387/503 (76%)
 Frame = -1

Query: 1946 GLNAKLSTRVSQQRRPSILSFKTGKTKNAALVAPQESLTLPMEISKKNEKRSRRSVRHPE 1767
            GL+++ S R+   +RP I+SFK   TKN  LV+P+ES++ P+E SK+NEKRSRR  +  E
Sbjct: 16   GLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETSKENEKRSRRVSKRTE 75

Query: 1766 RVKVISIDQETPSTLELDYNEAAAKLEHIYKRSPATSDCETELKDHEVKRGQHRRKAVEE 1587
            RV  ++I+   PSTLELDY+EAAAKLE IYKRS  T+   TE+KDH VKR    RK + E
Sbjct: 76   RVHAVTIEAP-PSTLELDYSEAAAKLESIYKRSLETASPNTEVKDHLVKRRPRTRKRIVE 134

Query: 1586 DKEEANKGTAANIVXXXXXXXXRLNLEKRIALRKKKETEIVVSSKSKKRTDHDEEGKINR 1407
              EEA K    N+V        RLNL++RIAL K KE                       
Sbjct: 135  SDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEG---------------------- 172

Query: 1406 LVREYSTSTDFVSLDWKKMKIPPVLPSSEHAWLFKLMQPLKAILQVKENLQSDLGREPTD 1227
                   +TD  SLDWKKMKIPPVLPSSEH WLFKLMQP+KAILQVKENLQ+DLGREPTD
Sbjct: 173  -------ATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQVKENLQNDLGREPTD 225

Query: 1226 GELAEATNMDVVELRKKMEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAG 1047
            GE+AEATNMD  ELRKK+E GRAARNKLIKHNLRLVLFVMNKYFQDFAN  +FQDLCQAG
Sbjct: 226  GEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQDFANASRFQDLCQAG 285

Query: 1046 VKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQKAKLE 867
            VKGLITAIDRFEP R FRLSTYGLFWIRHAIIR MT SSFTKV FGLES+RVEIQKAKLE
Sbjct: 286  VKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVPFGLESIRVEIQKAKLE 345

Query: 866  LLFELHRMPTEEEIIERVGISPERYHEVMRASKPIISLHSRHSVTQEEFINGITDVDGVE 687
            LLFEL R+PT++EII+RVG SPERYHEVM+ SKPI SLH+R+  TQEE INGITDVDGV+
Sbjct: 346  LLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTTQEELINGITDVDGVD 405

Query: 686  GGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 507
             GDKR+QPA            LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK
Sbjct: 406  -GDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 464

Query: 506  HEVKALMKLKHPARVDYLRRYVY 438
            HEVKALMKLKHP RVDY+RRY++
Sbjct: 465  HEVKALMKLKHPTRVDYVRRYIF 487


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Fragaria vesca subsp.
            vesca]
          Length = 520

 Score =  650 bits (1676), Expect = 0.0
 Identities = 342/505 (67%), Positives = 401/505 (79%), Gaps = 3/505 (0%)
 Frame = -1

Query: 1946 GLNAKL-STRVSQQRRPSILSFKTGKTKNAALVAPQESLTLPMEISKKNEKRSRRSVRHP 1770
            GL+  L S++ S  R+P I++F+T K+   ALVAPQE + LP+E  KK +KR  ++ + P
Sbjct: 16   GLSTNLVSSQRSTLRKPLIVAFRTDKSDKKALVAPQEKVPLPIETGKKVQKRLGKARKLP 75

Query: 1769 ERVKVISIDQETPSTLELDYNEAAAKLEHIYKRSPATSDCETELKDH-EVKRGQHRRKAV 1593
            + VK   I++     LELDYNEAAAKLE++YKRSP T   + E  D   +KRG+ RRK +
Sbjct: 76   KSVKAALIEEAPTCDLELDYNEAAAKLENLYKRSPETEASDVENVDGLMIKRGRKRRKKI 135

Query: 1592 EEDKEEANKGTAANIVXXXXXXXXR-LNLEKRIALRKKKETEIVVSSKSKKRTDHDEEGK 1416
             E  ++  K T+ +IV        + L+L+KR+AL+  K+ ++  S   K++    E   
Sbjct: 136  SEVDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVAASVVRKRKDKRSENEM 195

Query: 1415 INRLVREYSTSTDFVSLDWKKMKIPPVLPSSEHAWLFKLMQPLKAILQVKENLQSDLGRE 1236
            +  LVREYS STD VSLDWKKM+IPPVL SSEH WLFKLMQP+K +L+VKE LQ DLGRE
Sbjct: 196  MEELVREYSASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMKGLLEVKEILQKDLGRE 255

Query: 1235 PTDGELAEATNMDVVELRKKMEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDLC 1056
            P  GELAEATNM VV++++ +EVGRAARNKLIKHNLRLVLFV+NKYFQDFANGPKFQDLC
Sbjct: 256  PNKGELAEATNMTVVQVKRHLEVGRAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLC 315

Query: 1055 QAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQKA 876
            QAGVKGLITAIDRFEP+R FRLSTYGLFWIRHAIIRSMTLSSFT+VSFGLESVR EIQKA
Sbjct: 316  QAGVKGLITAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKA 375

Query: 875  KLELLFELHRMPTEEEIIERVGISPERYHEVMRASKPIISLHSRHSVTQEEFINGITDVD 696
            KLE+L +L RMPTE+EIIE+VGISPERYHEVMRASKP+ SL+SRHSVTQEEFINGITDVD
Sbjct: 376  KLEMLVQLKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLNSRHSVTQEEFINGITDVD 435

Query: 695  GVEGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREM 516
            GV+ GD RR+PA            LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREM
Sbjct: 436  GVD-GDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREM 494

Query: 515  VRKHEVKALMKLKHPARVDYLRRYV 441
            VRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 495  VRKHEVKALMKLKHPARVDYLRRYI 519


>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
            gi|567858878|ref|XP_006422122.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
            gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Citrus
            sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Citrus
            sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Citrus
            sinensis] gi|557523994|gb|ESR35361.1| hypothetical
            protein CICLE_v10004760mg [Citrus clementina]
            gi|557523995|gb|ESR35362.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
          Length = 513

 Score =  640 bits (1650), Expect = 0.0
 Identities = 331/492 (67%), Positives = 392/492 (79%)
 Frame = -1

Query: 1916 SQQRRPSILSFKTGKTKNAALVAPQESLTLPMEISKKNEKRSRRSVRHPERVKVISIDQE 1737
            S  +RP I++FK  K+ N AL +PQE + LP+E  K+++KR   S +  ERVK +  D+ 
Sbjct: 24   STSKRPLIVAFKADKSNNQALFSPQEQIPLPIETPKRHQKRRENSRKRLERVKGVFSDEA 83

Query: 1736 TPSTLELDYNEAAAKLEHIYKRSPATSDCETELKDHEVKRGQHRRKAVEEDKEEANKGTA 1557
            +P TL++DYNEAAAKLE+IYK SPA +  E +  D  VKRG+ RRK + E +++++  + 
Sbjct: 84   SPCTLDVDYNEAAAKLENIYKLSPAVTTSEVKYADGVVKRGRQRRKRIGEVEKKSDDVSG 143

Query: 1556 ANIVXXXXXXXXRLNLEKRIALRKKKETEIVVSSKSKKRTDHDEEGKINRLVREYSTSTD 1377
              +V        RL+L+KRI LRK ++ ++V  +K++K    DE  KI +LVREYS STD
Sbjct: 144  KPVVRNQVKRPKRLSLDKRIELRKNEDEKVV--TKTRKTDSKDEHEKIEKLVREYSYSTD 201

Query: 1376 FVSLDWKKMKIPPVLPSSEHAWLFKLMQPLKAILQVKENLQSDLGREPTDGELAEATNMD 1197
             VSLDWKKMKIPPVL S+EH WLFKLMQP+K  +QVKE LQ DLGREPTD ELAEATNM 
Sbjct: 202  LVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQVKEQLQKDLGREPTDVELAEATNMS 261

Query: 1196 VVELRKKMEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAGVKGLITAIDR 1017
              +++K +EVGRAARNKLIKHNLRLVLFV+ KYFQDFANGP+FQDLCQAGVKGLITAIDR
Sbjct: 262  AAQVKKCLEVGRAARNKLIKHNLRLVLFVIKKYFQDFANGPRFQDLCQAGVKGLITAIDR 321

Query: 1016 FEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQKAKLELLFELHRMPT 837
            FEPKR FRLSTYGLFWIRHAIIRSMT+SSFT+V FGLESVR EIQ+AKLELLFEL R+PT
Sbjct: 322  FEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVPFGLESVRGEIQRAKLELLFELKRVPT 381

Query: 836  EEEIIERVGISPERYHEVMRASKPIISLHSRHSVTQEEFINGITDVDGVEGGDKRRQPAX 657
            +EEII+ V ISPERY EVM+ASKPI+SLHSRH VTQEEFINGITDVDGVE  + +RQPA 
Sbjct: 382  DEEIIQGVNISPERYREVMKASKPILSLHSRHGVTQEEFINGITDVDGVE-NENQRQPAL 440

Query: 656  XXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLK 477
                       LKPKESLVIRQR+GLDGKGDRTLGEIAGNLNISREMVRKHEVK LMKLK
Sbjct: 441  LRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNISREMVRKHEVKGLMKLK 500

Query: 476  HPARVDYLRRYV 441
            HP RVDYLR+++
Sbjct: 501  HPTRVDYLRQHM 512


>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  637 bits (1643), Expect = e-180
 Identities = 337/505 (66%), Positives = 396/505 (78%), Gaps = 4/505 (0%)
 Frame = -1

Query: 1943 LNAKLSTRVSQQRRPSILSFKTGKTKNAALVAPQESLTLPMEISKKNEKRSRRSVRHPER 1764
            L  K S   S  +RPSI++FK  K  N  LV+P E +TLP+E + + +KRS  + +  +R
Sbjct: 17   LGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESNNRRKKRSGNTSKPLKR 76

Query: 1763 VKVISIDQETPSTLELDYNEAAAKLEHIYKRSPATSDCETELKDHEVKRGQHRRKAVEED 1584
            VK + ID+ TP +L+LDYNEAAAKLE+I+K SP T D + E KD   KRGQ R       
Sbjct: 77   VKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKDGRSKRGQKR------S 130

Query: 1583 KEEANKGTAANIVXXXXXXXXRLNLEKRIALRKKKETEIVVSSKSKKRT----DHDEEGK 1416
            K+ AN+     IV        RL+L+KRIAL+ KKE + V   + +K T    D  ++ +
Sbjct: 131  KKSANR-PGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRKQKDTKNEADEIDDDE 189

Query: 1415 INRLVREYSTSTDFVSLDWKKMKIPPVLPSSEHAWLFKLMQPLKAILQVKENLQSDLGRE 1236
            I+RLVR+YS STD VSLDWKKMKIPPVLPSSEH  LFKL+QP+KA+++V+E LQ  LGRE
Sbjct: 190  IDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVEVQEELQKGLGRE 249

Query: 1235 PTDGELAEATNMDVVELRKKMEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDLC 1056
            PT+GELA ATNM+V+++R+++EVGRAARNKLIKHNLRLVLFV+NKYF+DFA+GPKFQDLC
Sbjct: 250  PTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLC 309

Query: 1055 QAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQKA 876
            QAGVKGLITAIDRFEPKR FRLSTY LFWIRHAIIRSMTLSSFT+VSFGL+SVRVEIQ+A
Sbjct: 310  QAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRA 369

Query: 875  KLELLFELHRMPTEEEIIERVGISPERYHEVMRASKPIISLHSRHSVTQEEFINGITDVD 696
            KLELL ELHR+PTE EI  +VGIS ERY EVMRA+KP+ SLHSRHS T EE INGITDV+
Sbjct: 370  KLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRHSTTSEELINGITDVE 429

Query: 695  GVEGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREM 516
            G  GGD RRQPA            LKPKESLVIRQRYGLDGKG+RTLGEIAGNLNISREM
Sbjct: 430  GT-GGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREM 488

Query: 515  VRKHEVKALMKLKHPARVDYLRRYV 441
            VRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 489  VRKHEVKALMKLKHPARVDYLRRYL 513


>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 515

 Score =  634 bits (1635), Expect = e-179
 Identities = 337/507 (66%), Positives = 398/507 (78%), Gaps = 6/507 (1%)
 Frame = -1

Query: 1943 LNAKLSTRVSQQRRPSILSFKTGKTKNAALVAPQESLTLPMEISKKNEKRSRRSVRHPER 1764
            L  K S   S  +RPSI++FK  K  N  LV+P E +TLP+E + + +KRS  + +  +R
Sbjct: 17   LGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESNNRRKKRSGNTSKPLKR 76

Query: 1763 VKVISIDQETPSTLELDYNEAAAKLEHIYKRSPATSDCETELKDHEVKRGQHRRKAVEED 1584
            VK + ID+ TP +L+LDYNEAAAKLE+I+K SP T D + E KD   KRGQ R       
Sbjct: 77   VKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKDGRSKRGQKR------S 130

Query: 1583 KEEANKGTAANIVXXXXXXXXRLNLEKRIALRKK------KETEIVVSSKSKKRTDHDEE 1422
            K+ AN+     IV        RL+L+KRIAL+ K      KE + V S + +K T ++++
Sbjct: 131  KKSANR-PGDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGKAVPSLRKQKETKNEDD 189

Query: 1421 GKINRLVREYSTSTDFVSLDWKKMKIPPVLPSSEHAWLFKLMQPLKAILQVKENLQSDLG 1242
             +I+RLVR+YS STD VSLDWKKMKIPPVLPSSEH  LFKL+QP+KA+++V+E LQ  LG
Sbjct: 190  -EIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVEVQEELQKGLG 248

Query: 1241 REPTDGELAEATNMDVVELRKKMEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQD 1062
            REPT+GELA ATNM+V+++R+++EVGRAARNKLIKHNLRLVLFV+NKYF+DFA+GPKFQD
Sbjct: 249  REPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQD 308

Query: 1061 LCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQ 882
            LCQAGVKGLITAIDRFEPKR FRLSTY LFWIRHAIIRSMTLSSFT+VSFGL+SVRVEIQ
Sbjct: 309  LCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQ 368

Query: 881  KAKLELLFELHRMPTEEEIIERVGISPERYHEVMRASKPIISLHSRHSVTQEEFINGITD 702
            +AKLELL ELHR+PTE EI  +VGIS ERY EVMRA+KP+ SLHSRHS T EE INGITD
Sbjct: 369  RAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRHSTTSEELINGITD 428

Query: 701  VDGVEGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISR 522
            V+G  GGD RRQPA            LKPKESLVIRQRYGLDGKG+RTLGEIAGNLNISR
Sbjct: 429  VEGT-GGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISR 487

Query: 521  EMVRKHEVKALMKLKHPARVDYLRRYV 441
            EMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 488  EMVRKHEVKALMKLKHPARVDYLRRYL 514


>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 517

 Score =  633 bits (1633), Expect = e-179
 Identities = 336/506 (66%), Positives = 393/506 (77%), Gaps = 4/506 (0%)
 Frame = -1

Query: 1946 GLNAKLST-RVSQQRRPSILSFKTGKTKNAALVAPQESLTLPMEISKKNEKRSRRSVRHP 1770
            GL+ K S+ R S  ++P I++FK  K+    LVAPQ+ + LP+E  K+ + R  ++ +  
Sbjct: 16   GLSLKFSSNRSSVLKKPLIVAFKGDKSNKTVLVAPQDQIILPVETRKEVKSRVGKAKKSS 75

Query: 1769 ERVKVISIDQETPSTLELDYNEAAAKLEHIYKRSPATSDCETELKDHEVKRGQHRRKAV- 1593
             RVK ++ D+ + ST+E+DYNEAAAKLE+I+K S A  +    L      RG+ RR  V 
Sbjct: 76   NRVKAVATDEASTSTMEVDYNEAAAKLENIFKLSSADVEDAVGL----TSRGRRRRSKVI 131

Query: 1592 -EEDKEEANKGTAAN-IVXXXXXXXXRLNLEKRIALRKKKETEIVVSSKSKKRTDHDEEG 1419
             E D+    K T ++ +V        RL+L KR+ L++ KE  + V    K+R   +EE 
Sbjct: 132  GESDERAGKKSTTSDTVVRNRKKKAKRLSLHKRVELKRDKEENVAVVLVRKRRESLNEEE 191

Query: 1418 KINRLVREYSTSTDFVSLDWKKMKIPPVLPSSEHAWLFKLMQPLKAILQVKENLQSDLGR 1239
            KI +LVREYS STD VSLDWKKMKIPPVLPSSEH WLFKLMQPLK + QV E+LQ  LGR
Sbjct: 192  KIEKLVREYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPLKQLFQVGEDLQKTLGR 251

Query: 1238 EPTDGELAEATNMDVVELRKKMEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDL 1059
            EPT+ ELAEATN+ VV++++ +E GRAARNKLIKHNLRLVLFVMNKYFQDF NGPKFQDL
Sbjct: 252  EPTENELAEATNISVVQVKRHLEAGRAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQDL 311

Query: 1058 CQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQK 879
            CQAGV+GLITAIDRFEPKR FRLSTYGLFWIRHAIIRSMT+SSFT+VSFGLESVR EIQK
Sbjct: 312  CQAGVRGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVSFGLESVRAEIQK 371

Query: 878  AKLELLFELHRMPTEEEIIERVGISPERYHEVMRASKPIISLHSRHSVTQEEFINGITDV 699
            AK+EL FEL R+PTEEEIIE+VGISPERYHEVMRASKP+ISL+SRH  TQEEFIN ITDV
Sbjct: 372  AKIELTFELKRLPTEEEIIEKVGISPERYHEVMRASKPVISLNSRHVTTQEEFINAITDV 431

Query: 698  DGVEGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISRE 519
            DGV+ GD RR+PA            LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISRE
Sbjct: 432  DGVD-GDDRRKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISRE 490

Query: 518  MVRKHEVKALMKLKHPARVDYLRRYV 441
            MVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 491  MVRKHEVKALMKLKHPARVDYLRRYM 516


>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
            trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
            sigma subunit SigE family protein [Populus trichocarpa]
          Length = 512

 Score =  629 bits (1623), Expect = e-177
 Identities = 336/502 (66%), Positives = 388/502 (77%)
 Frame = -1

Query: 1946 GLNAKLSTRVSQQRRPSILSFKTGKTKNAALVAPQESLTLPMEISKKNEKRSRRSVRHPE 1767
            GL+ K ST  S  +RP I++FK  K+ N +LVAP E + LP+E +K  +KR  +S +   
Sbjct: 16   GLSTKFSTYGSTAKRPLIVAFKANKSNNTSLVAPHEQIPLPVETTK-GKKRLGKSKKSSN 74

Query: 1766 RVKVISIDQETPSTLELDYNEAAAKLEHIYKRSPATSDCETELKDHEVKRGQHRRKAVEE 1587
            R+K +  +  +P TL +DYNEAAAKLE+IYK SP T   + E     ++RG+ R++ + E
Sbjct: 75   RLKAVRTEV-SPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDASGVIRRGRQRKRKISE 133

Query: 1586 DKEEANKGTAANIVXXXXXXXXRLNLEKRIALRKKKETEIVVSSKSKKRTDHDEEGKINR 1407
              +E    T   IV        RL+LEKRI+LR K E E +VSS  K++   +E  KI+ 
Sbjct: 134  GDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNE-EKLVSSAGKRKDRKNENEKIDD 192

Query: 1406 LVREYSTSTDFVSLDWKKMKIPPVLPSSEHAWLFKLMQPLKAILQVKENLQSDLGREPTD 1227
            LVREYS STD VSLDWKKMKIPPVL SSEH WLFKLMQP+KA+LQVKE+LQ +LG EPTD
Sbjct: 193  LVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQVKEHLQENLGGEPTD 252

Query: 1226 GELAEATNMDVVELRKKMEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAG 1047
             ELA+ATNMDV+++RK++ VGRAARNKLIKHNLRLVLFV+ KYFQDFANG KFQD CQAG
Sbjct: 253  VELAKATNMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQDFANGTKFQDFCQAG 312

Query: 1046 VKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQKAKLE 867
            VKGLITAIDRFEPKR FRLSTYGLFWIRHAIIRSMTLSSFT+VSFGLES+R EIQKAKLE
Sbjct: 313  VKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESIRSEIQKAKLE 372

Query: 866  LLFELHRMPTEEEIIERVGISPERYHEVMRASKPIISLHSRHSVTQEEFINGITDVDGVE 687
            L F+L R P E+EIIE+V ISPERYHEV RASKP++SLHSRH  TQEEFI GI DVD   
Sbjct: 373  LWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLSLHSRHKTTQEEFIGGIADVD--- 429

Query: 686  GGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 507
            GGD RRQ A            LKPKESLV+RQRYGLDGKGDRTLGEIAGNLNISREMVRK
Sbjct: 430  GGDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGNLNISREMVRK 489

Query: 506  HEVKALMKLKHPARVDYLRRYV 441
            HEVKALMKLKHP RVDYLRRYV
Sbjct: 490  HEVKALMKLKHPTRVDYLRRYV 511


>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 501

 Score =  626 bits (1615), Expect = e-176
 Identities = 332/502 (66%), Positives = 390/502 (77%)
 Frame = -1

Query: 1946 GLNAKLSTRVSQQRRPSILSFKTGKTKNAALVAPQESLTLPMEISKKNEKRSRRSVRHPE 1767
            GL+ K ST  S  +R  +++FK  K  +  LV P+E   LP+E SK  ++R + +     
Sbjct: 16   GLSLKFSTYRSTVKRSLVVAFKEDKANDIILVPPRERTPLPIETSKGKKRRGKTN----- 70

Query: 1766 RVKVISIDQETPSTLELDYNEAAAKLEHIYKRSPATSDCETELKDHEVKRGQHRRKAVEE 1587
                    + +  TLE+DYNEAAAKLE+IYK SPAT   + ++    +++G+ R++   E
Sbjct: 71   -------REVSSGTLEVDYNEAAAKLENIYKLSPATDTSDVDINGL-IRKGRQRKRKTGE 122

Query: 1586 DKEEANKGTAANIVXXXXXXXXRLNLEKRIALRKKKETEIVVSSKSKKRTDHDEEGKINR 1407
              E+A   T+  IV        RL+L+KRIAL+K +E E+V   + KK +  D E KI  
Sbjct: 123  GDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIRKKKDSKDDNE-KIEE 181

Query: 1406 LVREYSTSTDFVSLDWKKMKIPPVLPSSEHAWLFKLMQPLKAILQVKENLQSDLGREPTD 1227
            LVR YS ST+ VSLDW+KMKIPPVLPS+EHAWLFKLMQP+K +L VK +LQ +LGR+PTD
Sbjct: 182  LVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLPVKADLQKNLGRDPTD 241

Query: 1226 GELAEATNMDVVELRKKMEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAG 1047
            GELAEATNM+V ++RK++EVGRAARNKLIKHNLRLV+FVMNKYFQDFANGP+FQDLCQAG
Sbjct: 242  GELAEATNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQDFANGPRFQDLCQAG 301

Query: 1046 VKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQKAKLE 867
            VKGLITAIDRFEP+R F+LSTY LFWIRHAIIRSMTLSSFTKVSFGLESVR EIQKAKLE
Sbjct: 302  VKGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKVSFGLESVRTEIQKAKLE 361

Query: 866  LLFELHRMPTEEEIIERVGISPERYHEVMRASKPIISLHSRHSVTQEEFINGITDVDGVE 687
            LL EL R PTEEEIIERVGIS ERYHEV+RA+KP +SLH+RH+VTQEEFINGITD+D   
Sbjct: 362  LLIELQRRPTEEEIIERVGISAERYHEVIRAAKPALSLHARHAVTQEEFINGITDID--- 418

Query: 686  GGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 507
            GGD RRQPA            LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK
Sbjct: 419  GGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 478

Query: 506  HEVKALMKLKHPARVDYLRRYV 441
            +EVKALMKLKHPARVDYLRRYV
Sbjct: 479  YEVKALMKLKHPARVDYLRRYV 500


>ref|XP_002333134.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  626 bits (1615), Expect = e-176
 Identities = 335/502 (66%), Positives = 387/502 (77%)
 Frame = -1

Query: 1946 GLNAKLSTRVSQQRRPSILSFKTGKTKNAALVAPQESLTLPMEISKKNEKRSRRSVRHPE 1767
            GL+ K ST  S  +RP I++FK  K+ N +LVAP E + LP+E +K  +KR  +S +   
Sbjct: 16   GLSTKFSTYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETTK-GKKRLGKSKKSSN 74

Query: 1766 RVKVISIDQETPSTLELDYNEAAAKLEHIYKRSPATSDCETELKDHEVKRGQHRRKAVEE 1587
            R+K +  +  +P TL +DYNEAAAKLE+IYK SP T   + E     ++RG+ R++ + E
Sbjct: 75   RLKAVRTEV-SPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDASGVIRRGRQRKRKISE 133

Query: 1586 DKEEANKGTAANIVXXXXXXXXRLNLEKRIALRKKKETEIVVSSKSKKRTDHDEEGKINR 1407
              +E    T   IV        RL+LEKRI+LR K E E +VSS  K++   +E  KI+ 
Sbjct: 134  GGKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNE-EKLVSSAGKRKDRKNENEKIDD 192

Query: 1406 LVREYSTSTDFVSLDWKKMKIPPVLPSSEHAWLFKLMQPLKAILQVKENLQSDLGREPTD 1227
            LVREYS STD VSLDWKKMKIPPVL SSEH WLFKLMQP+KA+LQVKE+LQ +LG EPTD
Sbjct: 193  LVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQVKEHLQENLGGEPTD 252

Query: 1226 GELAEATNMDVVELRKKMEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAG 1047
             ELA+A NMDV+++RK++ VGRAARNKLIKHNLRLVLFV+ KYFQDFANG KFQD CQAG
Sbjct: 253  VELAKAINMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQDFANGTKFQDFCQAG 312

Query: 1046 VKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQKAKLE 867
            VKGLITAIDRFEPKR FRLSTYGLFWIRHAIIRSMTLSSFT+VSFGLES+R EIQKAKLE
Sbjct: 313  VKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESIRSEIQKAKLE 372

Query: 866  LLFELHRMPTEEEIIERVGISPERYHEVMRASKPIISLHSRHSVTQEEFINGITDVDGVE 687
            L F+L R P E+EIIE+V ISPERYHEV RASKP++SLHSRH  TQEEFI GI DVD   
Sbjct: 373  LWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLSLHSRHKTTQEEFIGGIADVD--- 429

Query: 686  GGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 507
            GGD RRQ A            LKPKESLV+RQRYGLDGKGDRTLGEIAGNLNISREMVRK
Sbjct: 430  GGDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGNLNISREMVRK 489

Query: 506  HEVKALMKLKHPARVDYLRRYV 441
            HEVKALMKLKHP RVDYLRRYV
Sbjct: 490  HEVKALMKLKHPTRVDYLRRYV 511


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Glycine max]
            gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Glycine max]
          Length = 512

 Score =  618 bits (1593), Expect = e-174
 Identities = 319/501 (63%), Positives = 391/501 (78%)
 Frame = -1

Query: 1943 LNAKLSTRVSQQRRPSILSFKTGKTKNAALVAPQESLTLPMEISKKNEKRSRRSVRHPER 1764
            LN +L +     +RP IL+FK  K+    LV+PQE + LP+E +KK++KR  ++    +R
Sbjct: 17   LNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETAKKHQKRVGKTSESLKR 76

Query: 1763 VKVISIDQETPSTLELDYNEAAAKLEHIYKRSPATSDCETELKDHEVKRGQHRRKAVEED 1584
            V+ +S  + +P TL++DYNEAAAKLE+IYK SP +  C  E  D +++R   RRK V E+
Sbjct: 77   VRAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDIDSKIERVLRRRKKVSEE 136

Query: 1583 KEEANKGTAANIVXXXXXXXXRLNLEKRIALRKKKETEIVVSSKSKKRTDHDEEGKINRL 1404
            +++ N     N+V        RL+L+KRIAL+   + E V+    KKR   +    I+ L
Sbjct: 137  RDDGN---CDNVVRNQNKKAKRLSLDKRIALKNNAKEE-VIDQTQKKRNVKNRVQNIDVL 192

Query: 1403 VREYSTSTDFVSLDWKKMKIPPVLPSSEHAWLFKLMQPLKAILQVKENLQSDLGREPTDG 1224
            +R+YS STD VS+DWKKMKIPPVLPSSEHAWLFKLMQP+KA+LQ KE+L+ ++ +E T G
Sbjct: 193  IRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQAKEDLK-EVDKEITGG 251

Query: 1223 ELAEATNMDVVELRKKMEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAGV 1044
            ELA+ATNM ++++RK +EVGRAARNKLIKHNLRLVLFV+NKYFQDFA+GP+FQDLCQAGV
Sbjct: 252  ELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDLCQAGV 311

Query: 1043 KGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQKAKLEL 864
            KGLITAIDRFEPKR  +LSTY LFWIRH+I+RS+TLSSFT+V FGLE VRV+IQ+ KL+L
Sbjct: 312  KGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQRTKLKL 371

Query: 863  LFELHRMPTEEEIIERVGISPERYHEVMRASKPIISLHSRHSVTQEEFINGITDVDGVEG 684
             FEL R PTEEE++ER+GIS ERYHEVM+ASKPI+SLHSRH  TQEE+INGITDVDGV  
Sbjct: 372  TFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITTQEEYINGITDVDGV-N 430

Query: 683  GDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKH 504
            GD RRQ A            LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISRE+VRKH
Sbjct: 431  GDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREIVRKH 490

Query: 503  EVKALMKLKHPARVDYLRRYV 441
            EVKALMKLKHPAR+DYLRRYV
Sbjct: 491  EVKALMKLKHPARLDYLRRYV 511


>ref|XP_002331841.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  615 bits (1587), Expect = e-173
 Identities = 326/502 (64%), Positives = 394/502 (78%)
 Frame = -1

Query: 1946 GLNAKLSTRVSQQRRPSILSFKTGKTKNAALVAPQESLTLPMEISKKNEKRSRRSVRHPE 1767
            G + K ST  S  +RP I++FK  K+   ALVAP E + LP+E +K+ ++R + S +  +
Sbjct: 16   GFSTKFSTCRSTAKRPLIVAFKADKSNETALVAPHEQIPLPIETTKEKKRRGK-SKKSSD 74

Query: 1766 RVKVISIDQETPSTLELDYNEAAAKLEHIYKRSPATSDCETELKDHEVKRGQHRRKAVEE 1587
            R+K +  +  +P TL +DYNEAAAKLE+IYK SP T   + E  +  ++R + R++   E
Sbjct: 75   RLKAVRTEV-SPCTLGVDYNEAAAKLENIYKLSPGTDTSDVEDVNGVIRRCRQRKRKTSE 133

Query: 1586 DKEEANKGTAANIVXXXXXXXXRLNLEKRIALRKKKETEIVVSSKSKKRTDHDEEGKINR 1407
             ++E +  T+  IV        RL+L+KRIALR K + E +V+S  K++   +E  KI+ 
Sbjct: 134  CEKEDDGRTSKIIVRNQAKKAKRLSLQKRIALRIKSD-EKLVTSVGKRKGRKNENEKIDE 192

Query: 1406 LVREYSTSTDFVSLDWKKMKIPPVLPSSEHAWLFKLMQPLKAILQVKENLQSDLGREPTD 1227
            LVREYS+STD  SLDWKKMKIPPVL S+EHAWLFKLMQP+KA LQVKE+LQ + GREPT+
Sbjct: 193  LVREYSSSTDLASLDWKKMKIPPVLTSAEHAWLFKLMQPMKASLQVKEHLQENSGREPTE 252

Query: 1226 GELAEATNMDVVELRKKMEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAG 1047
            GELAEAT+MDV+++RK++EVGRAARNKLIKHNLRLVLFV+NKYFQD+ANGP++QDLCQAG
Sbjct: 253  GELAEATDMDVLQVRKQIEVGRAARNKLIKHNLRLVLFVINKYFQDYANGPRYQDLCQAG 312

Query: 1046 VKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQKAKLE 867
            VKGL+TAIDRFEPKR FRLSTYGLFWIRHAIIRSMTLSSFT+VSFGLES+R EIQKAKLE
Sbjct: 313  VKGLMTAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESIRSEIQKAKLE 372

Query: 866  LLFELHRMPTEEEIIERVGISPERYHEVMRASKPIISLHSRHSVTQEEFINGITDVDGVE 687
            L F+L R PT EEIIE+VGIS ERYHEVMRASKP++SLHSRH  TQEE I+G+ DV+   
Sbjct: 373  LWFQLLRKPTGEEIIEKVGISIERYHEVMRASKPVLSLHSRHKTTQEELISGVADVN--- 429

Query: 686  GGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 507
            GGD RRQ A            LKPKESLV+RQR+GLDGKGDRTLGEIAGNLNISREMVRK
Sbjct: 430  GGDDRRQSALLRLALDDVLDSLKPKESLVVRQRFGLDGKGDRTLGEIAGNLNISREMVRK 489

Query: 506  HEVKALMKLKHPARVDYLRRYV 441
            HE KALMKLKHP RVDYL RYV
Sbjct: 490  HEAKALMKLKHPTRVDYLCRYV 511


>ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glycine max]
            gi|382365028|dbj|BAM05477.1| sigma-like factor 5A
            [Glycine max]
          Length = 512

 Score =  610 bits (1573), Expect = e-172
 Identities = 319/501 (63%), Positives = 390/501 (77%)
 Frame = -1

Query: 1943 LNAKLSTRVSQQRRPSILSFKTGKTKNAALVAPQESLTLPMEISKKNEKRSRRSVRHPER 1764
            LN +L++     +RP I++FK  K   AALV+PQE + LP+E +KK++KR  ++    +R
Sbjct: 17   LNTRLTSHQQVHKRPLIVAFKGNKLNKAALVSPQEQIPLPIETAKKDQKRVGKTSESLKR 76

Query: 1763 VKVISIDQETPSTLELDYNEAAAKLEHIYKRSPATSDCETELKDHEVKRGQHRRKAVEED 1584
            V+ +SI + +P TL++DYNEAAAKLE+IYK SP +  C  E  D +V+R   RR+ V  +
Sbjct: 77   VRAVSIVETSPCTLDMDYNEAAAKLENIYKLSPVSDTCNMEDIDSKVERVLWRRRKVGNE 136

Query: 1583 KEEANKGTAANIVXXXXXXXXRLNLEKRIALRKKKETEIVVSSKSKKRTDHDEEGKINRL 1404
             ++ N      +V        RL+L+KRI L+   + E V+    K R   +    I+ L
Sbjct: 137  HDDENCDI---VVRNQNKKAKRLSLDKRITLKNNAKEE-VIDQTQKIRNVKNRVQNIDVL 192

Query: 1403 VREYSTSTDFVSLDWKKMKIPPVLPSSEHAWLFKLMQPLKAILQVKENLQSDLGREPTDG 1224
            +R+YS STD VS+DWKKMKIP VLPSSEHAWLFKLMQP+KA+LQ KE+LQS +G+E TDG
Sbjct: 193  IRDYSASTDLVSMDWKKMKIPAVLPSSEHAWLFKLMQPMKALLQAKEDLQS-VGKEITDG 251

Query: 1223 ELAEATNMDVVELRKKMEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAGV 1044
            ELA+ATNM ++++RK +EVGRAARNKLIKHNLRLVLFV++KYFQDFA+G +FQDLCQAGV
Sbjct: 252  ELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVISKYFQDFASGRRFQDLCQAGV 311

Query: 1043 KGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQKAKLEL 864
            KGLITAIDRFEPKR  +LSTY LFWIRH+I+RS+TLSSFT+V FGLE VRV+IQ+ KL+L
Sbjct: 312  KGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQRTKLKL 371

Query: 863  LFELHRMPTEEEIIERVGISPERYHEVMRASKPIISLHSRHSVTQEEFINGITDVDGVEG 684
             FEL R PTEEE++ER+GISPERY+EVM+ASKPI+SLHSRH  TQEE+INGITDVDGV  
Sbjct: 372  TFELQRSPTEEELVERIGISPERYYEVMKASKPILSLHSRHITTQEEYINGITDVDGV-N 430

Query: 683  GDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKH 504
            GD RRQ A            LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKH
Sbjct: 431  GDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKH 490

Query: 503  EVKALMKLKHPARVDYLRRYV 441
            EVKALMKLKHPAR+DYLRRYV
Sbjct: 491  EVKALMKLKHPARLDYLRRYV 511


>gb|ESW33340.1| hypothetical protein PHAVU_001G061400g [Phaseolus vulgaris]
          Length = 511

 Score =  605 bits (1559), Expect = e-170
 Identities = 311/501 (62%), Positives = 395/501 (78%)
 Frame = -1

Query: 1943 LNAKLSTRVSQQRRPSILSFKTGKTKNAALVAPQESLTLPMEISKKNEKRSRRSVRHPER 1764
            L+ KL +     +R  I++FK  K     LV+P+E + LP+E +KK+ KR  ++    +R
Sbjct: 17   LSTKLISLQQAHKRLLIVAFKGNKLNKTTLVSPKEQIPLPLETAKKHRKRIGKTNDSVKR 76

Query: 1763 VKVISIDQETPSTLELDYNEAAAKLEHIYKRSPATSDCETELKDHEVKRGQHRRKAVEED 1584
            V+ +S D+ TP TL++DYNEAAAKLE+IYK S  +S C+TE  D + KR   RRK V ++
Sbjct: 77   VRAVSTDETTPFTLDVDYNEAAAKLENIYKLSSVSSTCDTEDIDSKTKRVLRRRKNVGDE 136

Query: 1583 KEEANKGTAANIVXXXXXXXXRLNLEKRIALRKKKETEIVVSSKSKKRTDHDEEGKINRL 1404
             ++ N G+   +V        RL+L+KRIAL++  + E++V ++ K+  +  E   I+ L
Sbjct: 137  HDDRNDGS---VVRNQNKKAKRLSLDKRIALKRNPKQEVIVQAQKKRDVNRIEN--IDAL 191

Query: 1403 VREYSTSTDFVSLDWKKMKIPPVLPSSEHAWLFKLMQPLKAILQVKENLQSDLGREPTDG 1224
            +REYS STD VS+DWKK+KIPPVLPSSEHAWLFKLM+P+K +LQV+E+LQ ++G+E +DG
Sbjct: 192  IREYSASTDLVSMDWKKIKIPPVLPSSEHAWLFKLMEPMKELLQVREDLQ-EVGKEISDG 250

Query: 1223 ELAEATNMDVVELRKKMEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAGV 1044
            ELA+A ++ V+++RK +EVG+AARNKLIKHNLRLVLFV+NKYFQDFA+GP+FQDLCQAGV
Sbjct: 251  ELADANSISVIQVRKALEVGQAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDLCQAGV 310

Query: 1043 KGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQKAKLEL 864
            KGLITAIDRFE KR  +LSTY LFWIRH+I+RS+TLSS T+V FGL+ VR +I +AKLEL
Sbjct: 311  KGLITAIDRFESKRRLQLSTYSLFWIRHSIVRSITLSSLTRVPFGLDRVRADIHRAKLEL 370

Query: 863  LFELHRMPTEEEIIERVGISPERYHEVMRASKPIISLHSRHSVTQEEFINGITDVDGVEG 684
             FEL R PTE+E++ER+GISPERY++V++ASKPIISLHSRH VTQEEFINGITD+DGV+ 
Sbjct: 371  RFELQRSPTEKEVVERIGISPERYYDVLKASKPIISLHSRHIVTQEEFINGITDLDGVD- 429

Query: 683  GDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKH 504
            GD RRQ A            LKPKESLV+RQRYGLDGKGDRTLGEIAGNLNISREMVRKH
Sbjct: 430  GDNRRQLAVLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGEIAGNLNISREMVRKH 489

Query: 503  EVKALMKLKHPARVDYLRRYV 441
            EVKALMKLKHPAR+DYLRRYV
Sbjct: 490  EVKALMKLKHPARLDYLRRYV 510


>dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila]
          Length = 511

 Score =  597 bits (1539), Expect = e-168
 Identities = 321/506 (63%), Positives = 385/506 (76%), Gaps = 4/506 (0%)
 Frame = -1

Query: 1946 GLNAKLSTRVSQQRRPSILSFKTGKTKNAALVAPQESLTLPMEISKKNEKR---SRRSVR 1776
            GL++ L T  S  ++PSI++FK   + N+AL+ P E + +P E  K+ EKR    R+  +
Sbjct: 16   GLSSDLLTHRSSLKKPSIVAFKADDSTNSALIIPSEQILIPAE--KQKEKRVVTKRKPCK 73

Query: 1775 HPERVKVISIDQETPSTLELDYNEAAAKLEHIYKRSPATSDCETELKDHEVKRGQHRRKA 1596
             P++   +  +     +L +DYNEAAA+LE IYK SPATS  E ++   +VK  + RR+ 
Sbjct: 74   TPKKPSSLDHNLAPSCSLGVDYNEAAARLESIYKLSPATS-VEDDIDGSKVKVSRRRRR- 131

Query: 1595 VEEDKEEANKGTAANIVXXXXXXXXRLNLEKRIALRKKKETEIVVSSKSKKRTD-HDEEG 1419
             +E  EE        +V        RL+L+KRIAL++  + + +V S  KK T    EE 
Sbjct: 132  -KEGGEEKKV-----VVRNNGMKEKRLSLDKRIALKRNIQEKPLVPSAQKKVTKKQQEEE 185

Query: 1418 KINRLVREYSTSTDFVSLDWKKMKIPPVLPSSEHAWLFKLMQPLKAILQVKENLQSDLGR 1239
            KI RLVR+YS S D VSLDWKKMKIPPVLPS+EHAWLFKLMQP+KA+LQVK+ LQ  LGR
Sbjct: 186  KIERLVRDYSASHDIVSLDWKKMKIPPVLPSTEHAWLFKLMQPMKALLQVKDELQKSLGR 245

Query: 1238 EPTDGELAEATNMDVVELRKKMEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDL 1059
            EP + E+A   NM   E+++K+E+GRAARNKLIKHNLRLVLFVMNKYFQDF NGPKFQDL
Sbjct: 246  EPRETEIAGEINMSAAEVKRKIEIGRAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQDL 305

Query: 1058 CQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQK 879
            CQAG++GLITAIDRFEPKR FRLSTYGLFWIRHAIIRSMT S+FT+V FGLESVRVEI K
Sbjct: 306  CQAGMRGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRVPFGLESVRVEIYK 365

Query: 878  AKLELLFELHRMPTEEEIIERVGISPERYHEVMRASKPIISLHSRHSVTQEEFINGITDV 699
             K+ELLFEL R+PTE+E++ER+ ISPERY EV+RA+KP+ SL+S+HSVTQEEFINGITDV
Sbjct: 366  TKMELLFELGRLPTEDEVVERLKISPERYREVLRAAKPVFSLNSKHSVTQEEFINGITDV 425

Query: 698  DGVEGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISRE 519
            DGV G D RRQPA            LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISRE
Sbjct: 426  DGV-GADNRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISRE 484

Query: 518  MVRKHEVKALMKLKHPARVDYLRRYV 441
            MVRKHEVKALMKLKH ARVDYLR+Y+
Sbjct: 485  MVRKHEVKALMKLKHQARVDYLRQYI 510


>ref|XP_006593758.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Glycine max]
          Length = 488

 Score =  593 bits (1530), Expect = e-167
 Identities = 306/468 (65%), Positives = 372/468 (79%)
 Frame = -1

Query: 1844 QESLTLPMEISKKNEKRSRRSVRHPERVKVISIDQETPSTLELDYNEAAAKLEHIYKRSP 1665
            QE + LP+E +KK++KR  ++    +RV+ +S  + +P TL++DYNEAAAKLE+IYK SP
Sbjct: 26   QEKIPLPLETAKKHQKRVGKTSESLKRVRAVSTVETSPCTLDVDYNEAAAKLENIYKLSP 85

Query: 1664 ATSDCETELKDHEVKRGQHRRKAVEEDKEEANKGTAANIVXXXXXXXXRLNLEKRIALRK 1485
             +  C  E  D +++R   RRK V E++++ N     N+V        RL+L+KRIAL+ 
Sbjct: 86   VSDTCNVEDIDSKIERVLRRRKKVSEERDDGN---CDNVVRNQNKKAKRLSLDKRIALKN 142

Query: 1484 KKETEIVVSSKSKKRTDHDEEGKINRLVREYSTSTDFVSLDWKKMKIPPVLPSSEHAWLF 1305
              + E V+    KKR   +    I+ L+R+YS STD VS+DWKKMKIPPVLPSSEHAWLF
Sbjct: 143  NAKEE-VIDQTQKKRNVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLF 201

Query: 1304 KLMQPLKAILQVKENLQSDLGREPTDGELAEATNMDVVELRKKMEVGRAARNKLIKHNLR 1125
            KLMQP+KA+LQ KE+L+ ++ +E T GELA+ATNM ++++RK +EVGRAARNKLIKHNLR
Sbjct: 202  KLMQPMKALLQAKEDLK-EVDKEITGGELADATNMSIIQVRKAIEVGRAARNKLIKHNLR 260

Query: 1124 LVLFVMNKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRS 945
            LVLFV+NKYFQDFA+GP+FQDLCQAGVKGLITAIDRFEPKR  +LSTY LFWIRH+I+RS
Sbjct: 261  LVLFVINKYFQDFASGPRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRS 320

Query: 944  MTLSSFTKVSFGLESVRVEIQKAKLELLFELHRMPTEEEIIERVGISPERYHEVMRASKP 765
            +TLSSFT+V FGLE VRV+IQ+ KL+L FEL R PTEEE++ER+GIS ERYHEVM+ASKP
Sbjct: 321  ITLSSFTRVPFGLERVRVDIQRTKLKLTFELQRSPTEEELVERIGISLERYHEVMKASKP 380

Query: 764  IISLHSRHSVTQEEFINGITDVDGVEGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 585
            I+SLHSRH  TQEE+INGITDVDGV  GD RRQ A            LKPKESLVIRQRY
Sbjct: 381  ILSLHSRHITTQEEYINGITDVDGV-NGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRY 439

Query: 584  GLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 441
            GLDGKGDRTLGEIAGNLNISRE+VRKHEVKALMKLKHPAR+DYLRRYV
Sbjct: 440  GLDGKGDRTLGEIAGNLNISREIVRKHEVKALMKLKHPARLDYLRRYV 487