BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00032267
         (299 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002879249.1| ubiquitin family protein [Arabidopsis lyrata...    59   9e-07
ref|NP_001189636.1| uncharacterized protein [Arabidopsis thalian...    57   3e-06
pdb|2KD0|A Chain A, Nmr Solution Structure Of O64736 Protein Fro...    57   3e-06
sp|P0C895.1|Y2010_ARATH RecName: Full=LRR repeats and ubiquitin-...    57   3e-06
gb|AAC16962.1| putative unknown protein, leucine-rich repeat [Ar...    57   3e-06

>ref|XP_002879249.1| ubiquitin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325088|gb|EFH55508.1| ubiquitin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 900

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 24/48 (50%), Positives = 35/48 (72%)
 Frame = +1

Query: 154 IRVNVKLGGRYVPFEISSDCTVKEFKNFLIRFSNDFPRGQRLIFKGRI 297
           I++ VK GG+ +P  +S DCTVK+ K+ L   +N  PRGQ+LIFKG++
Sbjct: 539 IKLTVKFGGKSIPLSVSQDCTVKDLKSLLQPITNVLPRGQKLIFKGKV 586


>ref|NP_001189636.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330253251|gb|AEC08345.1| uncharacterized protein
           AT2G30105 [Arabidopsis thaliana]
          Length = 367

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/48 (50%), Positives = 35/48 (72%)
 Frame = +1

Query: 154 IRVNVKLGGRYVPFEISSDCTVKEFKNFLIRFSNDFPRGQRLIFKGRI 297
           I++ VK GG+ +P  +S DCTVK+ K+ L   +N  PRGQ+LIFKG++
Sbjct: 6   IKLTVKFGGKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKV 53


>pdb|2KD0|A Chain A, Nmr Solution Structure Of O64736 Protein From Arabidopsis
           Thaliana. Northeast Structural Genomics Consortium Mega
           Target Ar3445a
          Length = 85

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/48 (50%), Positives = 35/48 (72%)
 Frame = +1

Query: 154 IRVNVKLGGRYVPFEISSDCTVKEFKNFLIRFSNDFPRGQRLIFKGRI 297
           I++ VK GG+ +P  +S DCTVK+ K+ L   +N  PRGQ+LIFKG++
Sbjct: 13  IKLTVKFGGKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKV 60


>sp|P0C895.1|Y2010_ARATH RecName: Full=LRR repeats and ubiquitin-like domain-containing
           protein At2g30105
          Length = 374

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/48 (50%), Positives = 35/48 (72%)
 Frame = +1

Query: 154 IRVNVKLGGRYVPFEISSDCTVKEFKNFLIRFSNDFPRGQRLIFKGRI 297
           I++ VK GG+ +P  +S DCTVK+ K+ L   +N  PRGQ+LIFKG++
Sbjct: 13  IKLTVKFGGKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKV 60


>gb|AAC16962.1| putative unknown protein, leucine-rich repeat [Arabidopsis
           thaliana]
          Length = 902

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/48 (50%), Positives = 35/48 (72%)
 Frame = +1

Query: 154 IRVNVKLGGRYVPFEISSDCTVKEFKNFLIRFSNDFPRGQRLIFKGRI 297
           I++ VK GG+ +P  +S DCTVK+ K+ L   +N  PRGQ+LIFKG++
Sbjct: 536 IKLTVKFGGKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKV 583