BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00023775
         (934 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006338488.1| PREDICTED: putative pentatricopeptide repeat...   384   e-104
emb|CBI35029.3| unnamed protein product [Vitis vinifera]              382   e-104
ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat...   382   e-104
ref|XP_004233685.1| PREDICTED: putative pentatricopeptide repeat...   379   e-102
ref|XP_004304947.1| PREDICTED: pentatricopeptide repeat-containi...   370   e-100
gb|EMJ17608.1| hypothetical protein PRUPE_ppa022709mg, partial [...   368   2e-99
gb|EXB36666.1| hypothetical protein L484_002079 [Morus notabilis]     360   3e-97
ref|XP_002517451.1| pentatricopeptide repeat-containing protein,...   357   4e-96
gb|EOY03349.1| Tetratricopeptide repeat (TPR)-like superfamily p...   356   8e-96
ref|NP_189507.2| pentatricopeptide repeat-containing protein [Ar...   354   2e-95
ref|XP_006290938.1| hypothetical protein CARUB_v10017051mg [Caps...   353   7e-95
ref|XP_002877120.1| pentatricopeptide repeat-containing protein ...   351   2e-94
ref|NP_189505.2| putative pentatricopeptide repeat-containing pr...   350   4e-94
ref|XP_006395353.1| hypothetical protein EUTSA_v10005682mg [Eutr...   339   8e-91
gb|EMT01880.1| hypothetical protein F775_14784 [Aegilops tauschii]    305   2e-80
ref|NP_001168258.1| hypothetical protein [Zea mays] gi|223947079...   303   5e-80
gb|EMS68422.1| hypothetical protein TRIUR3_23855 [Triticum urartu]    303   6e-80
ref|XP_004981863.1| PREDICTED: putative pentatricopeptide repeat...   302   1e-79
ref|NP_001173276.1| Os03g0158900 [Oryza sativa Japonica Group] g...   300   5e-79
ref|XP_002439151.1| hypothetical protein SORBIDRAFT_09g001360 [S...   299   9e-79

>ref|XP_006338488.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640-like [Solanum tuberosum]
          Length = 512

 Score =  384 bits (987), Expect = e-104
 Identities = 191/300 (63%), Positives = 227/300 (75%)
 Frame = +1

Query: 1    VFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDM 180
            +F++ML RG+ PDE+C+TTAL ACAQLG L+QGKWIHE+V   + L   D F+G+ALVDM
Sbjct: 211  IFQDMLGRGVGPDEYCVTTALGACAQLGALEQGKWIHEHVTKSEWLEY-DVFIGSALVDM 269

Query: 181  YAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIA 360
            YAKCG I+ A EVF  MPKRNK SWA +I G+AVHG    A  CLERMQ  DG+ PDG+ 
Sbjct: 270  YAKCGCINMASEVFESMPKRNKHSWATMIRGFAVHGRPELAISCLERMQVADGLKPDGVV 329

Query: 361  VLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRM 540
            +L VLAAC H+GL K+GQ LL+ MESLYG+ PEHEH+SCVVDLLCRAG+L +A++LIRRM
Sbjct: 330  ILAVLAACAHSGLQKEGQGLLDEMESLYGVTPEHEHFSCVVDLLCRAGRLDDALKLIRRM 389

Query: 541  PMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQY 720
            PMKP ASVWGALLSGCR+HNNV                       AYVQLSNIYL ARQ 
Sbjct: 390  PMKPRASVWGALLSGCRNHNNVNLAELAVKEILLVEDGNEAEEDSAYVQLSNIYLAARQC 449

Query: 721  DDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLMSLEVSID 900
            DDARRIRR IG++GL+KTPGYSA+EIDG+ +EFISGDVSH+ L +IH VL L  L+  ID
Sbjct: 450  DDARRIRRRIGDRGLRKTPGYSAIEIDGMINEFISGDVSHTCLADIHKVLDLTYLDPEID 509


>emb|CBI35029.3| unnamed protein product [Vitis vinifera]
          Length = 1596

 Score =  382 bits (982), Expect = e-104
 Identities = 188/297 (63%), Positives = 227/297 (76%)
 Frame = +1

Query: 4    FRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDMY 183
            FRNMLV G+EPDEFCLTTAL  CAQLG L QGKWIHEYV  RK L  AD F+GTALVDMY
Sbjct: 195  FRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEYVTKRKWLE-ADVFIGTALVDMY 253

Query: 184  AKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIAV 363
            AKCG ID + EVF  M KRN FSW+A+IGG+A+HG   +A QCLERMQ EDG+ PDG+ +
Sbjct: 254  AKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQVEDGLRPDGVVL 313

Query: 364  LGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRMP 543
            LGV+ AC HAGL ++GQFLLENME+ YG++P+HEHYSC+VDLLCRAGQL EA++LIRRMP
Sbjct: 314  LGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEALKLIRRMP 373

Query: 544  MKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQYD 723
            MKP A+VWGALLSGCR+HNNV                       AYVQLSNIYL A++ +
Sbjct: 374  MKPRAAVWGALLSGCRTHNNVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLAAQKCE 433

Query: 724  DARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLMSLEVS 894
            DA RIRRMIG+K +K  PG S +E++G  ++F+SGD+SH  L +IH +L L+SL+ S
Sbjct: 434  DACRIRRMIGDKRIKTKPGCSLIEVEGEVNQFVSGDISHPCLAQIHEMLDLVSLQHS 490



 Score = 78.2 bits (191), Expect = 4e-12
 Identities = 49/193 (25%), Positives = 89/193 (46%)
 Frame = +1

Query: 28  IEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDMYAKCGYIDT 207
           + PD+      ++AC     +  GK IH +V  +  +  +D  + TALV  YA+C  +  
Sbjct: 101 VGPDQHTFPFIISACTNSLWMLLGKQIHNWVL-KNGVASSDRHVQTALVRFYAECCAMGD 159

Query: 208 AEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIAVLGVLAACK 387
           A ++F  +P  +   W  ++ GY   G A +A      M    G+ PD   +   L  C 
Sbjct: 160 ARKLFDEIPNLDVVQWNVLLNGYVRRGLAPEALNAFRNMLV-SGVEPDEFCLTTALKGCA 218

Query: 388 HAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRMPMKPLASVW 567
             G ++QG+++ E +     L  +    + +VD+  + G +  +VE+   M  + + S W
Sbjct: 219 QLGALQQGKWIHEYVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFS-W 277

Query: 568 GALLSGCRSHNNV 606
            A++ G   H +V
Sbjct: 278 SAMIGGFALHGHV 290


>ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640-like [Vitis vinifera]
          Length = 511

 Score =  382 bits (982), Expect = e-104
 Identities = 188/297 (63%), Positives = 227/297 (76%)
 Frame = +1

Query: 4    FRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDMY 183
            FRNMLV G+EPDEFCLTTAL  CAQLG L QGKWIHEYV  RK L  AD F+GTALVDMY
Sbjct: 195  FRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEYVTKRKWLE-ADVFIGTALVDMY 253

Query: 184  AKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIAV 363
            AKCG ID + EVF  M KRN FSW+A+IGG+A+HG   +A QCLERMQ EDG+ PDG+ +
Sbjct: 254  AKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQVEDGLRPDGVVL 313

Query: 364  LGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRMP 543
            LGV+ AC HAGL ++GQFLLENME+ YG++P+HEHYSC+VDLLCRAGQL EA++LIRRMP
Sbjct: 314  LGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEALKLIRRMP 373

Query: 544  MKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQYD 723
            MKP A+VWGALLSGCR+HNNV                       AYVQLSNIYL A++ +
Sbjct: 374  MKPRAAVWGALLSGCRTHNNVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLAAQKCE 433

Query: 724  DARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLMSLEVS 894
            DA RIRRMIG+K +K  PG S +E++G  ++F+SGD+SH  L +IH +L L+SL+ S
Sbjct: 434  DACRIRRMIGDKRIKTKPGCSLIEVEGEVNQFVSGDISHPCLAQIHEMLDLVSLQHS 490



 Score = 78.2 bits (191), Expect = 4e-12
 Identities = 49/193 (25%), Positives = 89/193 (46%)
 Frame = +1

Query: 28  IEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDMYAKCGYIDT 207
           + PD+      ++AC     +  GK IH +V  +  +  +D  + TALV  YA+C  +  
Sbjct: 101 VGPDQHTFPFIISACTNSLWMLLGKQIHNWVL-KNGVASSDRHVQTALVRFYAECCAMGD 159

Query: 208 AEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIAVLGVLAACK 387
           A ++F  +P  +   W  ++ GY   G A +A      M    G+ PD   +   L  C 
Sbjct: 160 ARKLFDEIPNLDVVQWNVLLNGYVRRGLAPEALNAFRNMLV-SGVEPDEFCLTTALKGCA 218

Query: 388 HAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRMPMKPLASVW 567
             G ++QG+++ E +     L  +    + +VD+  + G +  +VE+   M  + + S W
Sbjct: 219 QLGALQQGKWIHEYVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFS-W 277

Query: 568 GALLSGCRSHNNV 606
            A++ G   H +V
Sbjct: 278 SAMIGGFALHGHV 290


>ref|XP_004233685.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640-like [Solanum lycopersicum]
          Length = 487

 Score =  379 bits (972), Expect = e-102
 Identities = 189/300 (63%), Positives = 224/300 (74%)
 Frame = +1

Query: 1    VFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDM 180
            +F++ML RG+ PDE+C+TTAL ACAQLG L+QGKWIHE+V   + L   D F+G+ALVDM
Sbjct: 186  IFQDMLGRGVGPDEYCVTTALGACAQLGALEQGKWIHEHVTKSEWLEY-DVFIGSALVDM 244

Query: 181  YAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIA 360
            YAKCG I+ A EVF  MP RNK SWA +I G+AVHG    A  CLERMQ  DG+ PDG+ 
Sbjct: 245  YAKCGSINLASEVFESMPTRNKHSWATMIRGFAVHGRPELALSCLERMQVADGLKPDGVV 304

Query: 361  VLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRM 540
            +L VLAAC H+GL K+GQ LL+ MESLYG+ PEHEH+SCVVDLLCRAG+L +A++LIRRM
Sbjct: 305  ILAVLAACAHSGLQKEGQGLLDEMESLYGVTPEHEHFSCVVDLLCRAGRLDDALKLIRRM 364

Query: 541  PMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQY 720
            PMKP ASVWGALLSGCR+HNNV                       AYVQLSNIYL ARQ 
Sbjct: 365  PMKPRASVWGALLSGCRNHNNVNLAELAVKEILLVEDGNEAEEDSAYVQLSNIYLAARQC 424

Query: 721  DDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLMSLEVSID 900
            DDARRIRR IG++GL+KTPGYSA+EIDG+ +EFISGDVSH  L +IH VL L  L+   D
Sbjct: 425  DDARRIRRRIGDRGLRKTPGYSAIEIDGMVNEFISGDVSHICLADIHKVLDLTYLDPHFD 484


>ref|XP_004304947.1| PREDICTED: pentatricopeptide repeat-containing protein At3g28660-like
            [Fragaria vesca subsp. vesca]
          Length = 501

 Score =  370 bits (949), Expect = e-100
 Identities = 181/296 (61%), Positives = 221/296 (74%)
 Frame = +1

Query: 1    VFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDM 180
            VF++MLVRG EPD FC+ T L ACA LG L QGKWIHEYV+ R+ L  +D F+GTALVDM
Sbjct: 202  VFQDMLVRGFEPDGFCVATGLAACAHLGALWQGKWIHEYVRKREGLN-SDVFIGTALVDM 260

Query: 181  YAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIA 360
            YAKCG ID A E F  M KRN  SW+A+IG Y VHG A +A  CLERMQ +DG+ PDG+ 
Sbjct: 261  YAKCGCIDLAVEAFEGMGKRNVVSWSAMIGAYGVHGYATEAISCLERMQVDDGVKPDGVV 320

Query: 361  VLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRM 540
            +LGVL AC H GL+++G+ LL+NM++ YG+VP+HEHYSCV+DLLC+AG+L +A ELIRRM
Sbjct: 321  LLGVLTACNHGGLLEKGKALLDNMKAKYGIVPKHEHYSCVIDLLCKAGRLSDAFELIRRM 380

Query: 541  PMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQY 720
            PMKPLASVWGALLSGCR HNNV                       AYVQLSNIYLGA++ 
Sbjct: 381  PMKPLASVWGALLSGCRIHNNVDLAEIAVEQLLQVANDDRGEEVGAYVQLSNIYLGAQRS 440

Query: 721  DDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLMSLE 888
            +DA RIR+MIGEKG+KKTPG S +E+DG  +EF+SGDVSHS   +I  +L L+S +
Sbjct: 441  EDALRIRKMIGEKGIKKTPGCSMLEVDGKVNEFVSGDVSHSHCVQICTMLDLISAD 496



 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 59/190 (31%), Positives = 94/190 (49%)
 Frame = +1

Query: 28  IEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDMYAKCGYIDT 207
           +EPD F    A+  C   G +  G+ +H  V  +  L  AD  + TA+V +Y +CG +  
Sbjct: 109 LEPDNFTFHFAILGCVNCGWIGPGRQMHCLVV-KNGLVAADAHVQTAVVRLYVECGVLGD 167

Query: 208 AEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIAVLGVLAACK 387
           A +VF  +P+R+   W  I+ GY   G A++A +  + M    G  PDG  V   LAAC 
Sbjct: 168 AHKVFDEIPERDMVQWNVIMNGYVKRGLASEALRVFQDMLVR-GFEPDGFCVATGLAACA 226

Query: 388 HAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRMPMKPLASVW 567
           H G + QG+++ E +    GL  +    + +VD+  + G +  AVE    M  + + S W
Sbjct: 227 HLGALWQGKWIHEYVRKREGLNSDVFIGTALVDMYAKCGCIDLAVEAFEGMGKRNVVS-W 285

Query: 568 GALLSGCRSH 597
            A++     H
Sbjct: 286 SAMIGAYGVH 295


>gb|EMJ17608.1| hypothetical protein PRUPE_ppa022709mg, partial [Prunus persica]
          Length = 541

 Score =  368 bits (945), Expect = 2e-99
 Identities = 182/293 (62%), Positives = 218/293 (74%)
 Frame = +1

Query: 1    VFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDM 180
            VFR+MLV G EPD FC+ T L ACA LG L QGKWI EYVK R  L+ +D F+GTALVDM
Sbjct: 187  VFRDMLVTGFEPDNFCVATGLAACAHLGALRQGKWIDEYVKKRTGLK-SDVFIGTALVDM 245

Query: 181  YAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIA 360
            YAKCG ID A E F  MPKRN  SWAA+IGG+A HGCA  A   LERMQ +DG+ PDG+ 
Sbjct: 246  YAKCGCIDLAVEAFEGMPKRNVVSWAAMIGGFAAHGCATNAIHSLERMQVDDGLRPDGVV 305

Query: 361  VLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRM 540
            +L VL AC HAGL+++G+ LL+NM++ YG+VP+HEHYSCV+DLLC+AG+L EA++LIR+M
Sbjct: 306  LLVVLMACTHAGLLEKGKLLLDNMKTQYGIVPKHEHYSCVIDLLCKAGRLNEALKLIRKM 365

Query: 541  PMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQY 720
            PMKPLASVWGALLSGCR HNNV                       AYVQLSNIYLGAR+ 
Sbjct: 366  PMKPLASVWGALLSGCRIHNNVDLAELAVKELLQLENDVRGEEVGAYVQLSNIYLGARRG 425

Query: 721  DDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLM 879
            +DA RIR+MIGE G+KKTPG S +E+DG  +EF+SGDVSHS    I A+L L+
Sbjct: 426  EDAIRIRKMIGESGIKKTPGCSMIEVDGKVNEFVSGDVSHSHQAWICAMLDLI 478



 Score =  102 bits (255), Expect = 2e-19
 Identities = 59/188 (31%), Positives = 98/188 (52%)
 Frame = +1

Query: 34  PDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDMYAKCGYIDTAE 213
           PD +     + ACA    L  G+ IH +V  +  L + D  + TALV +YA+C  +D ++
Sbjct: 96  PDNYTFNFVILACANCSWLVSGRQIHNWVV-KNGLFLVDAHVQTALVRLYAECKVLDDSK 154

Query: 214 EVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIAVLGVLAACKHA 393
           +VF  +P+R+   W  ++ GY   G A++A +    M    G  PD   V   LAAC H 
Sbjct: 155 KVFDEIPERDVIQWNVLMNGYVRCGLASEALKVFRDMLV-TGFEPDNFCVATGLAACAHL 213

Query: 394 GLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRMPMKPLASVWGA 573
           G ++QG+++ E ++   GL  +    + +VD+  + G +  AVE    MP + + S W A
Sbjct: 214 GALRQGKWIDEYVKKRTGLKSDVFIGTALVDMYAKCGCIDLAVEAFEGMPKRNVVS-WAA 272

Query: 574 LLSGCRSH 597
           ++ G  +H
Sbjct: 273 MIGGFAAH 280


>gb|EXB36666.1| hypothetical protein L484_002079 [Morus notabilis]
          Length = 487

 Score =  360 bits (925), Expect = 3e-97
 Identities = 180/294 (61%), Positives = 216/294 (73%)
 Frame = +1

Query: 1    VFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDM 180
            VFR+ML  G+E DE C  TALTACAQ G L  GKWIHEY++ R+    +D F+GTALVDM
Sbjct: 172  VFRDMLKFGVELDECCAVTALTACAQSGALWWGKWIHEYIEKREGFE-SDVFVGTALVDM 230

Query: 181  YAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIA 360
            Y KCG +D A EVF +MP RN FSWAAIIGG+AVHG   +A +CLERMQA+DG+ PDG+ 
Sbjct: 231  YTKCGCLDMAVEVFEKMPTRNAFSWAAIIGGFAVHGQVMEAIRCLERMQADDGLKPDGVV 290

Query: 361  VLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRM 540
            +LGVL AC HAGL K+GQ LL NMES YG++P+HEHYSCVVDLLCRAG+L EA +LIRRM
Sbjct: 291  LLGVLTACTHAGLQKEGQLLLHNMESQYGILPKHEHYSCVVDLLCRAGKLREAYQLIRRM 350

Query: 541  PMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQY 720
            PMKPLASVWGALLSGCR  N V                        YVQLSNIYL A++ 
Sbjct: 351  PMKPLASVWGALLSGCRIRNYVDLAELAVKELVLLENEDKRGQDGVYVQLSNIYLAAQRT 410

Query: 721  DDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLMS 882
            +DA  IR+MIG+KG++KTPG S VE+DG  +EF+SGD+ HS   +I  +LYL+S
Sbjct: 411  EDAVLIRKMIGDKGIRKTPGCSTVEVDGRVNEFVSGDIVHSCQAKICVMLYLLS 464


>ref|XP_002517451.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543462|gb|EEF44993.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 428

 Score =  357 bits (916), Expect = 4e-96
 Identities = 173/293 (59%), Positives = 218/293 (74%)
 Frame = +1

Query: 1   VFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDM 180
           VFR M V+G+EPDEFC+TTAL ACA+ G L QGKWIHEYVK  K     D F+GTALVDM
Sbjct: 117 VFRFMFVKGVEPDEFCVTTALAACAKSGALWQGKWIHEYVK--KTTLGFDVFIGTALVDM 174

Query: 181 YAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIA 360
           YAKCG+I+ A +VF  MPKR+ FSWAA+IGGYA+HG A +A   LERM AEDG+ PDG+ 
Sbjct: 175 YAKCGWINMAVQVFEEMPKRSAFSWAAMIGGYAIHGYAREAIHYLERMHAEDGLRPDGVV 234

Query: 361 VLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRM 540
           +LGVL AC HAGL ++G+FLL+NM++ YG+VP HEHYSCVVDLLCRAG+  EA+ LI+RM
Sbjct: 235 LLGVLTACTHAGLQEEGRFLLDNMKARYGIVPRHEHYSCVVDLLCRAGRWDEALALIKRM 294

Query: 541 PMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQY 720
           PMKPLASVWGA+LS CR+H N                        A+VQL NIYL   + 
Sbjct: 295 PMKPLASVWGAVLSSCRTHKNAELAEFAVQELLQLENGNGNEEDAAFVQLWNIYLSTGRG 354

Query: 721 DDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLM 879
           +DA +I R+IGE+GLKKTPG S +E++G+ +EF+SGDVS+  + ++HA+L L+
Sbjct: 355 EDASKIHRLIGERGLKKTPGCSMIEVNGMVNEFVSGDVSNKDVAQMHAILELL 407



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 41/150 (27%), Positives = 73/150 (48%)
 Frame = +1

Query: 148 DEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQ 327
           D  + TA+V +YAKC  +  A ++F  + + +   W  ++ GY      ++A +   R  
Sbjct: 63  DGHIQTAVVRLYAKCKIMSDAHKMFDEIHRPDVIQWNVLMNGYIESNLESEALRVF-RFM 121

Query: 328 AEDGIMPDGIAVLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQ 507
              G+ PD   V   LAAC  +G + QG+++ E ++    L  +    + +VD+  + G 
Sbjct: 122 FVKGVEPDEFCVTTALAACAKSGALWQGKWIHEYVKKT-TLGFDVFIGTALVDMYAKCGW 180

Query: 508 LGEAVELIRRMPMKPLASVWGALLSGCRSH 597
           +  AV++   MP K  A  W A++ G   H
Sbjct: 181 INMAVQVFEEMP-KRSAFSWAAMIGGYAIH 209


>gb|EOY03349.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            [Theobroma cacao]
          Length = 499

 Score =  356 bits (913), Expect = 8e-96
 Identities = 174/293 (59%), Positives = 211/293 (72%)
 Frame = +1

Query: 1    VFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDM 180
            VF+ +LV GI+PDEFCLTTALTACAQ G L +GKWIHEY++ R+     D F+GTALVDM
Sbjct: 201  VFKELLVFGIQPDEFCLTTALTACAQNGSLREGKWIHEYLRKREKCLELDVFIGTALVDM 260

Query: 181  YAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIA 360
            YAKCG +D A EVF  M KRN +SWAA+IGG+AVHG A +A  C ERMQ  DGI PDG+ 
Sbjct: 261  YAKCGCLDLAVEVFEGMSKRNVYSWAAMIGGFAVHGHARKAIHCFERMQ-NDGIRPDGVV 319

Query: 361  VLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRM 540
            +LGVL AC HAGL ++G FLL NME  Y +VP+HEHYSCVVDLLCR G+  EA++LIRRM
Sbjct: 320  LLGVLTACTHAGLAEEGLFLLNNMEGQYRIVPKHEHYSCVVDLLCRTGKFDEALKLIRRM 379

Query: 541  PMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQY 720
            PM+PLASVWGALL+ CR +NNV                       A VQLSNIY  A++ 
Sbjct: 380  PMRPLASVWGALLNSCRIYNNVQLAELAVKELLELEDCDGDEEDAALVQLSNIYFSAQKS 439

Query: 721  DDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLM 879
            +D  RIRRMIG++GLKK PG S +E+DG   EF+SGD+SH    +IH +L L+
Sbjct: 440  EDGHRIRRMIGDRGLKKAPGCSMIEVDGRMTEFVSGDISHPLHSQIHTILRLL 492


>ref|NP_189507.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75273574|sp|Q9LJI9.1|PP260_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g28660 gi|9294280|dbj|BAB02182.1| unnamed protein
            product [Arabidopsis thaliana] gi|20259531|gb|AAM13885.1|
            unknown protein [Arabidopsis thaliana]
            gi|24030460|gb|AAN41382.1| unknown protein [Arabidopsis
            thaliana] gi|332643950|gb|AEE77471.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  354 bits (909), Expect = 2e-95
 Identities = 166/298 (55%), Positives = 226/298 (75%)
 Frame = +1

Query: 1    VFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDM 180
            VF+ MLVRGIEPDEF +TTALTACAQ+G L QGKWIHE+VK ++ +  +D F+GTALVDM
Sbjct: 205  VFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIE-SDVFVGTALVDM 263

Query: 181  YAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIA 360
            YAKCG I+TA EVF ++ +RN FSWAA+IGGYA +G A +A  CL+R++ EDGI PD + 
Sbjct: 264  YAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVV 323

Query: 361  VLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRM 540
            +LGVLAAC H G +++G+ +LENME+ YG+ P+HEHYSC+VDL+CRAG+L +A++LI +M
Sbjct: 324  LLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKM 383

Query: 541  PMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQY 720
            PMKPLASVWGALL+GCR+H NV                       A VQLSNIY   ++ 
Sbjct: 384  PMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRN 443

Query: 721  DDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLMSLEVS 894
             +A ++R MI ++G++KTPG+S +E+DG+  +F+SGDVSH  L +IH +++L+S++ S
Sbjct: 444  PEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLLSVDAS 501


>ref|XP_006290938.1| hypothetical protein CARUB_v10017051mg [Capsella rubella]
            gi|482559645|gb|EOA23836.1| hypothetical protein
            CARUB_v10017051mg [Capsella rubella]
          Length = 507

 Score =  353 bits (905), Expect = 7e-95
 Identities = 169/296 (57%), Positives = 220/296 (74%)
 Frame = +1

Query: 1    VFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDM 180
            VFR MLVRGIEPDEF +TTALTACAQ+G L QGKWIHE+VK +K ++ +D F+GTALVDM
Sbjct: 208  VFREMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKKWVK-SDVFVGTALVDM 266

Query: 181  YAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIA 360
            YAKCG I+TA EVF ++ +RN FSWAA+IGGYA +G A +A  CL+RM+ ED I PD + 
Sbjct: 267  YAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAREAIMCLDRMEREDAIKPDSVV 326

Query: 361  VLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRM 540
            +LGVLAAC H G +++G+ +L+NMES YG+ P+HEHYSC+VDL+CRAG+L  A++LI +M
Sbjct: 327  LLGVLAACAHGGFLQEGRSMLDNMESRYGITPKHEHYSCIVDLMCRAGRLDGALDLIEKM 386

Query: 541  PMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQY 720
            PMKPLASVWGALL+GCR+H NV                       A VQLSNIY   ++ 
Sbjct: 387  PMKPLASVWGALLNGCRTHKNVELGELAVKNLLELEKGNVDEEEAALVQLSNIYFSVQRN 446

Query: 721  DDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLMSLE 888
             +A +IR MI +KG+KK PG S +E+DG    F+SGD+SH  L +IH V++L+S++
Sbjct: 447  PEASKIRGMIDQKGIKKAPGCSVLEVDGDVTRFVSGDLSHPNLLQIHTVIHLLSVD 502


>ref|XP_002877120.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322958|gb|EFH53379.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 399

 Score =  351 bits (901), Expect = 2e-94
 Identities = 165/296 (55%), Positives = 222/296 (75%)
 Frame = +1

Query: 1   VFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDM 180
           VFR MLVRG+EPDEF +TTALTACAQ+G L QGKWIHE+VK ++ +  +D F+GTALVDM
Sbjct: 100 VFREMLVRGVEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIE-SDVFVGTALVDM 158

Query: 181 YAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIA 360
           YAKCG I+ A EVF ++ +RN FSWAA+IGGYA +G A +A  CL+RM+ EDGI PD + 
Sbjct: 159 YAKCGCIEMAVEVFEKLSRRNVFSWAALIGGYAAYGYAKKAMTCLDRMEREDGIKPDSVV 218

Query: 361 VLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRM 540
           +LGVLAAC H G +++G+ +L NME+ YG+ P+HEHYSC+VDL+CRAG+L +A++LI +M
Sbjct: 219 LLGVLAACAHGGFLQEGRAMLGNMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKM 278

Query: 541 PMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQY 720
           PMKPLASVWGALL+GCR+H NV                       A VQLSNIY   ++ 
Sbjct: 279 PMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNAEEEEAALVQLSNIYFSVQRN 338

Query: 721 DDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLMSLE 888
            +A ++R MI ++G++KTPG+S +E+DG   +F+SGDVSH  L +IH V++L+S++
Sbjct: 339 PEASKVRGMIEQRGIRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLLSVD 394



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 44/186 (23%), Positives = 86/186 (46%)
 Frame = +1

Query: 28  IEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDMYAKCGYIDT 207
           I P        + AC +      GK IH +V  +  + ++D  + T ++ +Y +   +  
Sbjct: 7   IAPSYLTFYFLIVACFKACLFSVGKQIHCWVV-KNGVFLSDGHVQTGILRIYVEDKVLLD 65

Query: 208 AEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIAVLGVLAACK 387
           A +VF  +PK +   W  ++ GY   G  ++  +    M    G+ PD  +V   L AC 
Sbjct: 66  AHKVFDEIPKPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVR-GVEPDEFSVTTALTACA 124

Query: 388 HAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRMPMKPLASVW 567
             G + QG+++ E ++    +  +    + +VD+  + G +  AVE+  ++  + + S W
Sbjct: 125 QVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIEMAVEVFEKLSRRNVFS-W 183

Query: 568 GALLSG 585
            AL+ G
Sbjct: 184 AALIGG 189


>ref|NP_189505.2| putative pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana] gi|75273576|sp|Q9LJJ1.1|PP259_ARATH RecName:
            Full=Putative pentatricopeptide repeat-containing protein
            At3g28640 gi|9294278|dbj|BAB02180.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|332643948|gb|AEE77469.1| putative pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  350 bits (898), Expect = 4e-94
 Identities = 166/296 (56%), Positives = 222/296 (75%)
 Frame = +1

Query: 1    VFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDM 180
            VFR MLV+G+EPDEF +TTALTACAQ+G L QGKWIHE+VK +K+   +D F+GTALVDM
Sbjct: 205  VFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVK-KKSWIESDVFVGTALVDM 263

Query: 181  YAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIA 360
            YAKCG I+TA EVF ++ +RN FSWAA+IGGYA +G A +A  CLER++ EDGI PD + 
Sbjct: 264  YAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVV 323

Query: 361  VLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRM 540
            +LGVLAAC H G +++G+ +LENME+ Y + P+HEHYSC+VDL+CRAG+L +A+ LI +M
Sbjct: 324  LLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKM 383

Query: 541  PMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQY 720
            PMKPLASVWGALL+GCR+H NV                       A VQLSNIY   ++ 
Sbjct: 384  PMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRN 443

Query: 721  DDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLMSLE 888
             +A ++R MI ++G++KTPG+S +E+DG   +F+SGDVSH  L +IH V++L+S++
Sbjct: 444  PEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLLSVD 499


>ref|XP_006395353.1| hypothetical protein EUTSA_v10005682mg [Eutrema salsugineum]
            gi|557091992|gb|ESQ32639.1| hypothetical protein
            EUTSA_v10005682mg [Eutrema salsugineum]
          Length = 505

 Score =  339 bits (870), Expect = 8e-91
 Identities = 165/296 (55%), Positives = 217/296 (73%)
 Frame = +1

Query: 1    VFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDM 180
            VFR ML RG EPD+F +TTALTACAQ+G L QGK IH+ +K +K L  +D ++GTALVDM
Sbjct: 206  VFREMLARGTEPDKFSVTTALTACAQVGALAQGKLIHKLLKKKKLLE-SDIYVGTALVDM 264

Query: 181  YAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIA 360
            YAKCG I+TA EVF  + +RN FSWA +IGGYA +G A +A  CL++M+ EDGI PD + 
Sbjct: 265  YAKCGCIETALEVFENLSRRNVFSWAVLIGGYAAYGYAKKAIMCLDQMEREDGIKPDSVV 324

Query: 361  VLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRM 540
            +L VLAAC H G +++G+ LL+NME+ YG+ P+HEHYSC+VDL+CRAG+L +AV+LI  M
Sbjct: 325  LLTVLAACAHGGFLQEGRALLDNMEARYGITPKHEHYSCIVDLICRAGRLDDAVDLIEGM 384

Query: 541  PMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQY 720
            PMKPLASVWGALL+GCR+H NV                       A VQLSNIYL A++ 
Sbjct: 385  PMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNADEEEAALVQLSNIYLIAQRN 444

Query: 721  DDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLMSLE 888
             +A  IRRMIG+KG++K PG S +E+DG   +F+SGDVSH  L +IH +++L+S++
Sbjct: 445  TEASNIRRMIGQKGIRKAPGCSVLEVDGNVTKFVSGDVSHQNLLQIHTMIHLLSVD 500


>gb|EMT01880.1| hypothetical protein F775_14784 [Aegilops tauschii]
          Length = 426

 Score =  305 bits (781), Expect = 2e-80
 Identities = 151/303 (49%), Positives = 199/303 (65%)
 Frame = +1

Query: 1    VFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDM 180
            +FR M V G+ PD   LTTA+ ACAQ G L+ G+W+H YV++     +AD F+G+ALV M
Sbjct: 101  LFRAMFVDGVAPDAVVLTTAVAACAQSGALECGEWVHRYVESNAPGLLADAFVGSALVSM 160

Query: 181  YAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIA 360
            YAKCG +  A  VF  MP+RN++ W  ++G +AVHG A +A  CLERM  EDG+ PDG+A
Sbjct: 161  YAKCGCLQEAVRVFEGMPERNEYVWGTMVGAFAVHGMAREAVACLERMAGEDGVRPDGVA 220

Query: 361  VLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRM 540
            VLG L+AC HAG V+ G  LL+ M   YG+ P HEHYSC VD+LCR G+L +AV LI  M
Sbjct: 221  VLGALSACAHAGKVEDGLRLLKEMRRRYGVTPGHEHYSCTVDMLCRVGRLEDAVGLIGTM 280

Query: 541  PMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQY 720
            PM PLASVWG+LL+GCR + NV                        YVQLSNIYL A + 
Sbjct: 281  PMTPLASVWGSLLAGCRMYGNV---KLAEVAAKELEKLGVGADEGVYVQLSNIYLDANRK 337

Query: 721  DDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLMSLEVSID 900
            DDARR+R++IG +GLKK P YSAVE+DG    F++ D +H R  EI  +L L++ ++ + 
Sbjct: 338  DDARRVRKLIGSRGLKKVPAYSAVEVDGELSSFVADDQAHPRRFEIWDLLGLLADQMGLK 397

Query: 901  QNK 909
             ++
Sbjct: 398  SDE 400



 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 3/191 (1%)
 Frame = +1

Query: 34  PDEFCLTTALTACAQLGDLDQ-GKWIHEY-VKNRKNLRVADEFLGTALVDMYAKCGYIDT 207
           PD      AL+A A        G  +H   VKN   L  +D ++ TAL+ ++A     D 
Sbjct: 11  PDHLSFPFALSAAAAAPVAPPPGPQLHALLVKNA--LFPSDHYVTTALLQLHAPRP--DD 66

Query: 208 AEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIAVLGVLAACK 387
           A  VF  +P+R    +  +IG YA  G A +    L R    DG+ PD + +   +AAC 
Sbjct: 67  ARRVFDELPRREAIHYDLVIGAYARAGMAAEGL-ALFRAMFVDGVAPDAVVLTTAVAACA 125

Query: 388 HAGLVKQGQFLLENMES-LYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRMPMKPLASV 564
            +G ++ G+++   +ES   GL+ +    S +V +  + G L EAV +   MP +    V
Sbjct: 126 QSGALECGEWVHRYVESNAPGLLADAFVGSALVSMYAKCGCLQEAVRVFEGMPERN-EYV 184

Query: 565 WGALLSGCRSH 597
           WG ++     H
Sbjct: 185 WGTMVGAFAVH 195


>ref|NP_001168258.1| hypothetical protein [Zea mays] gi|223947079|gb|ACN27623.1| unknown
            [Zea mays] gi|413942312|gb|AFW74961.1| hypothetical
            protein ZEAMMB73_025514 [Zea mays]
          Length = 506

 Score =  303 bits (777), Expect = 5e-80
 Identities = 155/304 (50%), Positives = 200/304 (65%), Gaps = 1/304 (0%)
 Frame = +1

Query: 1    VFRNMLVR-GIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVD 177
            VFR ML   G+ PD   LTTA+ ACAQ G LD G W+H YV+      +AD FLG+AL+ 
Sbjct: 193  VFRTMLDDDGVTPDAVVLTTAVAACAQAGALDLGAWVHRYVERAAPGLLADAFLGSALIG 252

Query: 178  MYAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGI 357
            MYAKCG ++ A  VF  MP+RN + WA ++G  AVHG A +A  CLERM  EDG+ PDG+
Sbjct: 253  MYAKCGCLEEAVRVFDGMPERNAYVWATMVGALAVHGMAAEAVACLERMAREDGVRPDGV 312

Query: 358  AVLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRR 537
            AVLG L+AC HAG V++G  LL  M   YG+VP HEHYSC VD+LCR G+L +AV L++ 
Sbjct: 313  AVLGALSACAHAGDVEEGLRLLGEMRPRYGVVPGHEHYSCAVDMLCRVGRLEDAVGLVKI 372

Query: 538  MPMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQ 717
            MPM PLASVWG++L+GCRSH NV                        YVQLSNIYL A +
Sbjct: 373  MPMAPLASVWGSVLAGCRSHGNV---ELAEVAARELERLGGSADEGVYVQLSNIYLDANR 429

Query: 718  YDDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLMSLEVSI 897
             DDARR+R++IG +G+KK P YSA+E+DG    F++ D +H R  EI  VL L++ +++ 
Sbjct: 430  KDDARRVRKLIGGRGIKKLPAYSALEVDGEVSSFVADDQAHPRRFEIWEVLRLLADQMAQ 489

Query: 898  DQNK 909
              N+
Sbjct: 490  KPNE 493



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 10/198 (5%)
 Frame = +1

Query: 34  PDEFCLTTALTACAQL---------GDLDQGKWIHEYVKNRKNLRVADEFLGTALVDMYA 186
           PD      AL+A A L              G  +H  +  R  L  AD ++ TAL+ +Y+
Sbjct: 95  PDHLSFPFALSAAAALDANPSSSAAAGTAPGPQLHALLV-RNALFPADHYVTTALLQLYS 153

Query: 187 KCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIAVL 366
                D A  VF  +P+R    +  +IG YA  G   +       M  +DG+ PD + + 
Sbjct: 154 PRP--DLARRVFDELPRREAIHYDLLIGSYARAGAPAEGLSVFRTMLDDDGVTPDAVVLT 211

Query: 367 GVLAACKHAGLVKQGQFLLENME-SLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRMP 543
             +AAC  AG +  G ++   +E +  GL+ +    S ++ +  + G L EAV +   MP
Sbjct: 212 TAVAACAQAGALDLGAWVHRYVERAAPGLLADAFLGSALIGMYAKCGCLEEAVRVFDGMP 271

Query: 544 MKPLASVWGALLSGCRSH 597
            +  A VW  ++     H
Sbjct: 272 ERN-AYVWATMVGALAVH 288


>gb|EMS68422.1| hypothetical protein TRIUR3_23855 [Triticum urartu]
          Length = 425

 Score =  303 bits (776), Expect = 6e-80
 Identities = 152/310 (49%), Positives = 200/310 (64%)
 Frame = +1

Query: 1    VFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDM 180
            +FR M   G+ PD   LTTA+ ACAQ G L+ G+W+H YV++     +AD F+G+ALV M
Sbjct: 101  LFRAMFADGVAPDAVVLTTAIAACAQSGALECGEWVHRYVESNAPGLLADAFVGSALVSM 160

Query: 181  YAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIA 360
            YAKCG +  A  VF  MP+RN++ W  ++G +AVHG A +A  CLERM  EDG+ PDG+A
Sbjct: 161  YAKCGCLQEAVRVFEGMPERNEYVWGTMVGAFAVHGMAREAVACLERMAGEDGVRPDGVA 220

Query: 361  VLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRM 540
            VLG L+AC HAG V+ G  LL+ M   YG+ P HEH+SC VD+LCR G+L +AV LI  M
Sbjct: 221  VLGALSACAHAGKVEDGLRLLKEMRRRYGVTPGHEHFSCTVDMLCRVGRLEDAVGLIGTM 280

Query: 541  PMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQY 720
            PM PLASVWG+LL+GCR + NV                        YVQLSNIYL A + 
Sbjct: 281  PMTPLASVWGSLLAGCRMYGNV---ELAEVAAKELEKLGMGADEGVYVQLSNIYLDANRK 337

Query: 721  DDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLMSLEVSID 900
            DDARR+R++IG +GLKK P YSAVEIDG    F++ D +H R  EI  +L L++ ++   
Sbjct: 338  DDARRVRKLIGNRGLKKVPAYSAVEIDGELSSFVADDQAHPRRFEIWDLLGLLADQMGRK 397

Query: 901  QNK*RRHETS 930
             ++    ET+
Sbjct: 398  PDEEEEEETT 407



 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
 Frame = +1

Query: 145 ADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERM 324
           +D ++ TAL+ ++A     D A  VF  +P+R    +  +IG YA  G A +       M
Sbjct: 48  SDHYVTTALLQLHAPRP--DDARRVFDELPRREAIHYDLVIGAYARAGMAAEGLALFRAM 105

Query: 325 QAEDGIMPDGIAVLGVLAACKHAGLVKQGQFLLENMES-LYGLVPEHEHYSCVVDLLCRA 501
            A DG+ PD + +   +AAC  +G ++ G+++   +ES   GL+ +    S +V +  + 
Sbjct: 106 FA-DGVAPDAVVLTTAIAACAQSGALECGEWVHRYVESNAPGLLADAFVGSALVSMYAKC 164

Query: 502 GQLGEAVELIRRMPMKPLASVWGALLSGCRSH 597
           G L EAV +   MP +    VWG ++     H
Sbjct: 165 GCLQEAVRVFEGMPERN-EYVWGTMVGAFAVH 195


>ref|XP_004981863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640-like [Setaria italica]
          Length = 495

 Score =  302 bits (773), Expect = 1e-79
 Identities = 151/293 (51%), Positives = 188/293 (64%)
 Frame = +1

Query: 1    VFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDM 180
            VFR M   G+ PD   LTTA+ ACAQ G LD G W+H YV+      + D F+G+ALV M
Sbjct: 188  VFRAMFEDGVAPDAVVLTTAVAACAQAGALDCGAWVHRYVERAAPGLLGDAFVGSALVSM 247

Query: 181  YAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIA 360
            YAKCG +D A  VF  MP+RN++ W  ++G +AVHG A +A  CLERM  EDG+ PDG+A
Sbjct: 248  YAKCGCLDEAVRVFDGMPERNEYVWGTMVGAFAVHGMAAEAVACLERMAREDGVRPDGVA 307

Query: 361  VLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRM 540
            VLG L+AC HAG V  G  LL  M   YG+ P HEHYSC VD+LCR G+L +AV LI  M
Sbjct: 308  VLGALSACAHAGKVDDGLRLLREMRGRYGVAPGHEHYSCTVDMLCRVGRLEDAVGLIGTM 367

Query: 541  PMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQY 720
            PM PL SVWG++L+GCRS+ NV                        YVQLSNIYL A + 
Sbjct: 368  PMAPLESVWGSVLAGCRSYGNV---ELAEVAARELEKLGGTADEGVYVQLSNIYLDANRK 424

Query: 721  DDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLM 879
            DDARR+R++IG +G+KK P YSAVE+DG    F++ D +H R  EI  VL L+
Sbjct: 425  DDARRVRKLIGSRGIKKAPAYSAVEVDGEVSSFVADDQAHPRCFEIWEVLRLL 477



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 7/195 (3%)
 Frame = +1

Query: 34  PDEFCLTTALTACAQL------GDLDQGKWIHEYVKNRKNLRVADEFLGTALVDMYAKCG 195
           PD      AL+A A +       D   G  +H  +  R  L   D ++ TAL+ +YA   
Sbjct: 93  PDHLSFPFALSAAAAVDAPDSSSDAGAGAQLHALLV-RNALFPVDHYVTTALLQLYAPRP 151

Query: 196 YIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIAVLGVL 375
             + A  VF  +P+R    +  +IG YA  G   +    + R   EDG+ PD + +   +
Sbjct: 152 --ELARRVFDELPRREAIHYDLVIGAYARAGMPAEGL-AVFRAMFEDGVAPDAVVLTTAV 208

Query: 376 AACKHAGLVKQGQFLLENME-SLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRMPMKP 552
           AAC  AG +  G ++   +E +  GL+ +    S +V +  + G L EAV +   MP + 
Sbjct: 209 AACAQAGALDCGAWVHRYVERAAPGLLGDAFVGSALVSMYAKCGCLDEAVRVFDGMPERN 268

Query: 553 LASVWGALLSGCRSH 597
              VWG ++     H
Sbjct: 269 -EYVWGTMVGAFAVH 282


>ref|NP_001173276.1| Os03g0158900 [Oryza sativa Japonica Group] gi|22773237|gb|AAN06843.1|
            Hypothetical protein [Oryza sativa Japonica Group]
            gi|108706287|gb|ABF94082.1| pentatricopeptide, putative,
            expressed [Oryza sativa Japonica Group]
            gi|125584986|gb|EAZ25650.1| hypothetical protein
            OsJ_09480 [Oryza sativa Japonica Group]
            gi|255674223|dbj|BAH92004.1| Os03g0158900 [Oryza sativa
            Japonica Group]
          Length = 490

 Score =  300 bits (768), Expect = 5e-79
 Identities = 145/294 (49%), Positives = 194/294 (65%)
 Frame = +1

Query: 1    VFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDM 180
            VFR M V G+ PD   LTTA+ ACAQ G L+ G+W+H YV+      + D F+G+ALV M
Sbjct: 185  VFRAMFVDGVAPDAVVLTTAIAACAQAGALECGEWVHRYVEASAPWLLGDAFVGSALVSM 244

Query: 181  YAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIA 360
            YAKCG ++ A  VF  MP+RN + W  ++G +AVHG A +A  CL+RM  EDG+ PDG+A
Sbjct: 245  YAKCGCLEQAVRVFDGMPERNDYVWGTMVGAFAVHGMAEEAVSCLDRMAREDGVRPDGVA 304

Query: 361  VLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRM 540
            VLG L+AC HAG V+ G  LL+ M   YG+ P HEHY+C VD+LCR G+L +AV LI  M
Sbjct: 305  VLGALSACAHAGKVEDGLRLLKEMRRRYGVAPGHEHYACTVDMLCRVGRLEDAVALIETM 364

Query: 541  PMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQY 720
            PM PLASVWG++L+GCR++ NV                        YVQLSNIYL + + 
Sbjct: 365  PMAPLASVWGSVLTGCRTYANV-----ELAEVAAAELGKLGADEGVYVQLSNIYLDSNRK 419

Query: 721  DDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLMS 882
            DDARR+R++IG +G++K P YSAVE+DG+   F++ D +H +  EI  VL L++
Sbjct: 420  DDARRVRKLIGSRGIRKVPAYSAVEVDGVVRSFVADDQAHPQRVEIWEVLGLLA 473



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 1/189 (0%)
 Frame = +1

Query: 34  PDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDMYAKCGYIDTAE 213
           PD      AL+A A +     G  +H  +    +   +D ++ TAL+ +       D A 
Sbjct: 95  PDHLSFPFALSAAATVSP-SPGAQLHALLVKNGHFP-SDHYVTTALLQLQLHAARPDDAR 152

Query: 214 EVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIAVLGVLAACKHA 393
            VF  +P+R    +  +IG Y   G A +       M   DG+ PD + +   +AAC  A
Sbjct: 153 RVFDELPRREAIHYDLVIGAYTRTGMAGEGLGVFRAMFV-DGVAPDAVVLTTAIAACAQA 211

Query: 394 GLVKQGQFLLENME-SLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRMPMKPLASVWG 570
           G ++ G+++   +E S   L+ +    S +V +  + G L +AV +   MP +    VWG
Sbjct: 212 GALECGEWVHRYVEASAPWLLGDAFVGSALVSMYAKCGCLEQAVRVFDGMPERN-DYVWG 270

Query: 571 ALLSGCRSH 597
            ++     H
Sbjct: 271 TMVGAFAVH 279


>ref|XP_002439151.1| hypothetical protein SORBIDRAFT_09g001360 [Sorghum bicolor]
            gi|190688727|gb|ACE86390.1| pentatricopeptide (PPR)
            repeat-containing protein [Sorghum bicolor]
            gi|241944436|gb|EES17581.1| hypothetical protein
            SORBIDRAFT_09g001360 [Sorghum bicolor]
          Length = 517

 Score =  299 bits (766), Expect = 9e-79
 Identities = 148/285 (51%), Positives = 187/285 (65%)
 Frame = +1

Query: 28   IEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDMYAKCGYIDT 207
            + PD   LTTA+ ACAQ G LD G W+H YV+      +AD FLG+ALV MYAKCG +D 
Sbjct: 205  VVPDAVVLTTAVAACAQAGALDHGAWVHRYVERTAPGLLADAFLGSALVGMYAKCGCLDD 264

Query: 208  AEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIAVLGVLAACK 387
            A  VF  MP+RN + W  ++G  AVHG A +A  CL+RM  EDG+ PDG+AVLG L+AC 
Sbjct: 265  AVRVFDGMPERNAYVWGTMVGALAVHGMAAEAVACLDRMAVEDGVRPDGVAVLGALSACA 324

Query: 388  HAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRMPMKPLASVW 567
            HAG V++G  LL  M   YG+VP HEHYSC VD+LCR G+L +AV L+  MPM PLASVW
Sbjct: 325  HAGNVEEGLCLLREMRPRYGVVPGHEHYSCAVDMLCRVGRLEDAVGLVETMPMAPLASVW 384

Query: 568  GALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQYDDARRIRRM 747
            G++L+GCRS+ NV                        YVQLSNIYL A + DDARR+R++
Sbjct: 385  GSVLAGCRSYGNV---ELAEVAVRELEKLGGTADEGVYVQLSNIYLDANRKDDARRVRKL 441

Query: 748  IGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLMS 882
            IG +G+KK P YSAVE+DG    F++ D +H R  EI  VL L++
Sbjct: 442  IGSRGIKKVPAYSAVEVDGEVSSFVADDQAHPRRFEIWEVLRLLA 486



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
 Frame = +1

Query: 34  PDEFCLTTALTACAQL-------GDLDQGKWIHEYVKNRKNLRVADEFLGTALVDMYAKC 192
           PD      AL+A A L            G  +H  +  R  L  AD ++ TAL+ +Y+  
Sbjct: 97  PDHLSFPFALSAAAALDATTPSSSSYSTGPQLHALLV-RNALFPADHYVTTALLQLYSP- 154

Query: 193 GYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDG--IMPDGIAVL 366
            + D A  VF  +P+R    +  +IG YA  G   +       M  +D   ++PD + + 
Sbjct: 155 -HPDLARRVFDELPRREAIHYDLLIGSYARAGAPTEGLAVFRAMFDDDDGVVVPDAVVLT 213

Query: 367 GVLAACKHAGLVKQGQFLLENME-SLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRMP 543
             +AAC  AG +  G ++   +E +  GL+ +    S +V +  + G L +AV +   MP
Sbjct: 214 TAVAACAQAGALDHGAWVHRYVERTAPGLLADAFLGSALVGMYAKCGCLDDAVRVFDGMP 273

Query: 544 MKPLASVWGALLSGCRSH 597
            +  A VWG ++     H
Sbjct: 274 ERN-AYVWGTMVGALAVH 290