BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039474
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containi...   107   8e-22
ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
ref|XP_002518071.1| pentatricopeptide repeat-containing protein,...    94   1e-17
ref|NP_171976.1| pentatricopeptide repeat-containing protein [Ar...    87   1e-15

>ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
           gi|449505311|ref|XP_004162432.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
          Length = 679

 Score =  107 bits (268), Expect = 8e-22
 Identities = 57/118 (48%), Positives = 76/118 (64%)
 Frame = -2

Query: 355 IIRALEENREFKVCVSCFVCMVRRNVRPNRLTYPSVLKAITALXXXXXXXXXXXXXXKRG 176
           +IR L EN  F+  +S FV M++  + P+RLT+P VLK+  AL              K G
Sbjct: 111 LIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFG 170

Query: 175 VEIEDFVRVYLVDMYVKFELLGSAVQVFDEMSYGVRLGNVLVWNVLINGCCKSGDMEK 2
           +E + FVRV LVDMYVK E LGSA++VFDE    V+ G+VL+WNVLI+G C+ GD+ K
Sbjct: 171 LEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVK 228


>ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  107 bits (267), Expect = 1e-21
 Identities = 57/118 (48%), Positives = 74/118 (62%)
 Frame = -2

Query: 355 IIRALEENREFKVCVSCFVCMVRRNVRPNRLTYPSVLKAITALXXXXXXXXXXXXXXKRG 176
           +IR L EN  F+  VS FV M+R ++RP+RLT P VLK++ AL              K G
Sbjct: 109 LIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLG 168

Query: 175 VEIEDFVRVYLVDMYVKFELLGSAVQVFDEMSYGVRLGNVLVWNVLINGCCKSGDMEK 2
           +E + FVRV LVDMYVK   LG  +Q+FDE     +  ++L+WNVLINGCCK GD+ K
Sbjct: 169 LEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSK 226


>ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|222847424|gb|EEE84971.1|
           predicted protein [Populus trichocarpa]
          Length = 719

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 54/119 (45%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
 Frame = -2

Query: 355 IIRALEENREFKVCVSCFVCMVRRNVRPNRLTYPSVLKAITALXXXXXXXXXXXXXXKRG 176
           +IR L  N  F   +  F  M+R  ++P+RLTYP VLK++  L              + G
Sbjct: 150 LIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCG 209

Query: 175 VEIEDFVRVYLVDMYVKFELLGSAVQVFDEMSYGVRLG-NVLVWNVLINGCCKSGDMEK 2
           +E++ FVRV LVDMYVK E LGSA +VFDE       G + L+WNVLI GCCK+G M+K
Sbjct: 210 IELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKK 268


>ref|XP_002518071.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542667|gb|EEF44204.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 404

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/118 (38%), Positives = 71/118 (60%)
 Frame = -2

Query: 355 IIRALEENREFKVCVSCFVCMVRRNVRPNRLTYPSVLKAITALXXXXXXXXXXXXXXKRG 176
           +IR L +N  +   +  F+ ++R +++P+ LT+  VLK+I +L              + G
Sbjct: 104 LIRGLTDNYRYLDSIDHFILLLRSDIKPDHLTFSFVLKSIASLSLKGLARALHGMILRCG 163

Query: 175 VEIEDFVRVYLVDMYVKFELLGSAVQVFDEMSYGVRLGNVLVWNVLINGCCKSGDMEK 2
           +E + FVR+ +VD+YVK E +  A++VFDE       G+ L+WNVLINGCCK GDM K
Sbjct: 164 LEFDSFVRISMVDVYVKLEEVKLALKVFDESPQRFHEGSTLLWNVLINGCCKVGDMRK 221


>ref|NP_171976.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75192500|sp|Q9MAT2.1|PPR10_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g04840 gi|7211995|gb|AAF40466.1|AC004809_24 F13M7.17
           [Arabidopsis thaliana] gi|332189629|gb|AEE27750.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 665

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/116 (41%), Positives = 68/116 (58%)
 Frame = -2

Query: 355 IIRALEENREFKVCVSCFVCMVRRNVRPNRLTYPSVLKAITALXXXXXXXXXXXXXXKRG 176
           +IR L EN  F+  V  F+ M+R  V+P+RLT+P VLK+ + L              K  
Sbjct: 97  LIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNF 156

Query: 175 VEIEDFVRVYLVDMYVKFELLGSAVQVFDEMSYGVRLGNVLVWNVLINGCCKSGDM 8
           V+ + FVR+ LVDMY K   L  A QVF+E    ++  ++L+WNVLING C++ DM
Sbjct: 157 VDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDM 212