BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039469
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...    77   1e-12
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]    75   5e-12
emb|CAN65182.1| hypothetical protein VITISV_029570 [Vitis vinifera]    71   1e-10
emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]    71   1e-10
gb|AAD17352.1| contains similarity to retrovirus-related polypro...    69   3e-10

>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
 Frame = +3

Query: 3   IWDEIDNLQPLPICDCRNCSCQLTQKFFKLQQDQRLMIFLMKLSNDYVNIRSHILMMENV 182
           IWD++  L    +C C  C+C+      K+Q+DQ+L+ FLM L+  Y  IR +ILMM+ +
Sbjct: 171 IWDQMKVLNTFMVCSCE-CNCEAKGHNAKMQEDQQLIQFLMGLNEVYSGIRGNILMMKPL 229

Query: 183 PNLAQAYRMLIKEQRHREISKMPTLMSKPVAFSAETKPYNN---------RQQVFSPTQP 335
           P+ AQAY ++  E+  R I+    + +   AF+A T+ +NN         R Q ++  + 
Sbjct: 230 PSTAQAYSIISHEETQRGIAAGNNVSTDSAAFNASTQNWNNQRNNYDNRARNQNYNNRRN 289

Query: 336 SQPGRFNAPNNA 371
           +  GR +  NN+
Sbjct: 290 NYEGRRSNQNNS 301


>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
          Length = 1157

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 31/96 (32%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
 Frame = +3

Query: 3   IWDEIDNLQPLPICDCRNCSCQLTQKFFKLQQDQRLMIFLMKLSND-YVNIRSHILMMEN 179
           +WDE++N   +P+C C  C C++T +  K ++++R+  FLM L  D Y  +RS+IL +E 
Sbjct: 106 LWDELNNYDSIPVCTCTRCKCKITTQLEKKREEERVHQFLMGLDEDGYGTVRSNILSIEP 165

Query: 180 VPNLAQAYRMLIKEQRHREISKMPTLMSKPVAFSAE 287
           + NL + Y M+++++R R +++       P++F+ +
Sbjct: 166 LSNLNRVYAMIVQQERVRTMTRTKEERGSPMSFAVQ 201


>emb|CAN65182.1| hypothetical protein VITISV_029570 [Vitis vinifera]
          Length = 1002

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/111 (32%), Positives = 64/111 (57%)
 Frame = +3

Query: 3   IWDEIDNLQPLPICDCRNCSCQLTQKFFKLQQDQRLMIFLMKLSNDYVNIRSHILMMENV 182
           +W+E+ N QPLP C C        Q + + QQ + ++ FLM L++ Y   RS ILMME +
Sbjct: 70  LWEELKNFQPLPACHCGGM-----QAWVEYQQQEHVIQFLMGLNDSYSQTRSQILMMEPI 124

Query: 183 PNLAQAYRMLIKEQRHREISKMPTLMSKPVAFSAETKPYNNRQQVFSPTQP 335
           P LA+ + ++++E+R R I++  + + +P+A    ++   N     S ++P
Sbjct: 125 PPLAKVFALVLQEERQRSINQGFSSLLQPLALGDSSQASANTHIGSSASKP 175


>emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]
          Length = 1149

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/103 (32%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   IWDEIDNLQPLPICDCRNCSCQLTQKFFKLQQDQRLMIFLMKLSND-YVNIRSHILMMEN 179
           IWDE++N   +P+C+C  C C LT    K ++++R+  FLM L  + Y  + S+IL  E 
Sbjct: 118 IWDELNNYDKMPVCNCVGCKCNLTIVLEKKREEERVHQFLMGLDEEGYGTVSSNILSTEP 177

Query: 180 VPNLAQAYRMLIKEQRHREISKMPTLMSKPVAFSAETKPYNNR 308
           +PNL + Y M+++++R R +++        ++F+ +    N+R
Sbjct: 178 LPNLNRVYAMVVQQERMRTMTRTKEERGNLMSFAMKVGGQNSR 220


>gb|AAD17352.1| contains similarity to retrovirus-related polyproteins [Arabidopsis
           thaliana] gi|7267379|emb|CAB77940.1| putative
           polyprotein [Arabidopsis thaliana]
          Length = 1366

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
 Frame = +3

Query: 6   WDEIDNLQPLPICDCRNCSCQLTQKFFKLQQDQRLMIFLMKLSNDYVNIRSHILMMENVP 185
           W+E+ N + LP C C  C+C    ++ +L +   ++ FLM+L+  ++  R  ILMM+ +P
Sbjct: 132 WEELKNFEELPSCTCGKCTCGSNDRWIQLYEKHNIVRFLMRLNESFIQARRQILMMDPLP 191

Query: 186 NLAQAYRMLIKEQRHREISKMPTLMSKPV--AFSAETKPYNNRQQ 314
                Y  + ++ + R  + MPT   KPV  A   + KP    QQ
Sbjct: 192 EFTNLYNFISQDDQQRSFNSMPT-TEKPVFQASITQQKPKFFNQQ 235