BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039435
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat...   151   6e-35
ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat...   137   1e-30
ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat...   137   1e-30
ref|XP_002318941.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
ref|XP_002512535.1| pentatricopeptide repeat-containing protein,...   134   6e-30

>ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570 [Vitis vinifera]
          Length = 607

 Score =  151 bits (381), Expect = 6e-35
 Identities = 76/105 (72%), Positives = 83/105 (79%)
 Frame = -2

Query: 315 PSFLATNLIKSYFEKGVIKEARTLFDEMSERDIVAWTAMISGYASCNYYTNAWMVFYNML 136
           PS LAT LIKSYF KG+I EARTLFDEM ERD+VAWT MI+GY SCN +T+AWMVF  M+
Sbjct: 42  PSVLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMM 101

Query: 135 RECHDPLNAFTFSSVLKVCKGMNSLSCGALVHGLALKHGLDGSSY 1
            E  DP NAFT SSVLK CKGM  LS G LVHGLA+KHGLDG  Y
Sbjct: 102 NEELDP-NAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIY 145



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/97 (35%), Positives = 53/97 (54%)
 Frame = -2

Query: 297 NLIKSYFEKGVIKEARTLFDEMSERDIVAWTAMISGYASCNYYTNAWMVFYNMLRECHDP 118
           +++  Y       EA   F EM++RD++ W  +I+GY   N  T +  VF  M  E   P
Sbjct: 251 SILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSNP-TESLYVFSMMESEGFSP 309

Query: 117 LNAFTFSSVLKVCKGMNSLSCGALVHGLALKHGLDGS 7
            N FTF+S++  C  +  L+CG  +HG  ++ GLDG+
Sbjct: 310 -NCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGN 345


>ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570-like [Cucumis sativus]
          Length = 594

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/105 (63%), Positives = 78/105 (74%)
 Frame = -2

Query: 315 PSFLATNLIKSYFEKGVIKEARTLFDEMSERDIVAWTAMISGYASCNYYTNAWMVFYNML 136
           PS  ATNLIKSYF+KG+ +EA  LF+E+ ERD+V WTAMI G+ SCN+Y  AW +F  ML
Sbjct: 42  PSVWATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEML 101

Query: 135 RECHDPLNAFTFSSVLKVCKGMNSLSCGALVHGLALKHGLDGSSY 1
           R    P NAFT SSVLK CKGM +LSCGAL H LA KHG+D S Y
Sbjct: 102 RSEVQP-NAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVY 145



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/95 (29%), Positives = 53/95 (55%)
 Frame = -2

Query: 297 NLIKSYFEKGVIKEARTLFDEMSERDIVAWTAMISGYASCNYYTNAWMVFYNMLRECHDP 118
           +++  Y     + +A+  F E++E++++ W  +I+GY   +  + +  +F+ M  E + P
Sbjct: 251 SILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERSDS-SESLSLFFQMGSEGYKP 309

Query: 117 LNAFTFSSVLKVCKGMNSLSCGALVHGLALKHGLD 13
            N FTF+S+   C  +  LSCG  VHG  ++ G D
Sbjct: 310 -NCFTFTSITAACANLAVLSCGQQVHGGIVRRGFD 343


>ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570-like [Cucumis sativus]
          Length = 606

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/105 (63%), Positives = 78/105 (74%)
 Frame = -2

Query: 315 PSFLATNLIKSYFEKGVIKEARTLFDEMSERDIVAWTAMISGYASCNYYTNAWMVFYNML 136
           PS  ATNLIKSYF+KG+ +EA  LF+E+ ERD+V WTAMI G+ SCN+Y  AW +F  ML
Sbjct: 42  PSVWATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEML 101

Query: 135 RECHDPLNAFTFSSVLKVCKGMNSLSCGALVHGLALKHGLDGSSY 1
           R    P NAFT SSVLK CKGM +LSCGAL H LA KHG+D S Y
Sbjct: 102 RSEVQP-NAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVY 145



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/95 (29%), Positives = 53/95 (55%)
 Frame = -2

Query: 297 NLIKSYFEKGVIKEARTLFDEMSERDIVAWTAMISGYASCNYYTNAWMVFYNMLRECHDP 118
           +++  Y     + +A+  F E++E++++ W  +I+GY   +  + +  +F+ M  E + P
Sbjct: 251 SILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERSDS-SESLSLFFQMGSEGYKP 309

Query: 117 LNAFTFSSVLKVCKGMNSLSCGALVHGLALKHGLD 13
            N FTF+S+   C  +  LSCG  VHG  ++ G D
Sbjct: 310 -NCFTFTSITAACANLAVLSCGQQVHGGIVRRGFD 343


>ref|XP_002318941.1| predicted protein [Populus trichocarpa] gi|222857317|gb|EEE94864.1|
           predicted protein [Populus trichocarpa]
          Length = 610

 Score =  137 bits (344), Expect = 1e-30
 Identities = 63/96 (65%), Positives = 75/96 (78%)
 Frame = -2

Query: 312 SFLATNLIKSYFEKGVIKEARTLFDEMSERDIVAWTAMISGYASCNYYTNAWMVFYNMLR 133
           S LAT+L+KSYFE+G+  +AR LFDEM ERD+VAWT MISGY  CN YT AW VF +M++
Sbjct: 44  SILATDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVK 103

Query: 132 ECHDPLNAFTFSSVLKVCKGMNSLSCGALVHGLALK 25
             +DP NAFT SSVLK CKGM  + CG LVHGLA+K
Sbjct: 104 NGNDPPNAFTISSVLKACKGMKRVFCGRLVHGLAIK 139



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/100 (32%), Positives = 54/100 (54%)
 Frame = -2

Query: 306 LATNLIKSYFEKGVIKEARTLFDEMSERDIVAWTAMISGYASCNYYTNAWMVFYNMLREC 127
           +  +++  Y   G + EA   F++M+E+D++ W  +I+GY   +     + +F  M  E 
Sbjct: 251 VTNSILDMYCRCGCLSEANKYFNDMTEKDLITWNTLIAGYERSDSI-EPFFIFSQMESEG 309

Query: 126 HDPLNAFTFSSVLKVCKGMNSLSCGALVHGLALKHGLDGS 7
             P N FTF+S++  C    +L CG  VHG   + GLDG+
Sbjct: 310 FSP-NCFTFTSLVAACANAAALQCGQQVHGGIFRRGLDGN 348


>ref|XP_002512535.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548496|gb|EEF49987.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 387

 Score =  134 bits (338), Expect = 6e-30
 Identities = 62/97 (63%), Positives = 78/97 (80%)
 Frame = -2

Query: 291 IKSYFEKGVIKEARTLFDEMSERDIVAWTAMISGYASCNYYTNAWMVFYNMLRECHDPLN 112
           +KSYFEKG+++EAR +FDEM ERD+VAWT MI+GYASCN +  AW +F +M+    +P N
Sbjct: 1   MKSYFEKGLVREARNVFDEMLERDVVAWTVMIAGYASCNEHAYAWSMFCDMVASEMNP-N 59

Query: 111 AFTFSSVLKVCKGMNSLSCGALVHGLALKHGLDGSSY 1
           AFT SSVLK CKGM SLSCG LVHG A+KHG++GS +
Sbjct: 60  AFTISSVLKACKGMKSLSCGTLVHGFAIKHGIEGSIF 96



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/95 (34%), Positives = 49/95 (51%)
 Frame = -2

Query: 297 NLIKSYFEKGVIKEARTLFDEMSERDIVAWTAMISGYASCNYYTNAWMVFYNMLRECHDP 118
           +++  Y   G + EA   F EM+ RD++ W  +I+GY   +    A  +F  M     DP
Sbjct: 202 SILDMYCRCGRLPEANQYFHEMTRRDLITWNTIIAGYERSD-SIEALFIFSEMKLNGFDP 260

Query: 117 LNAFTFSSVLKVCKGMNSLSCGALVHGLALKHGLD 13
            +  TF+SV   C  +  LSCG  VHG  ++ GLD
Sbjct: 261 -DCNTFTSVTAACANLAVLSCGQQVHGGIIQKGLD 294