BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039420
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ...    68   3e-12
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    72   4e-12
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    75   4e-12
ref|XP_002462405.1| hypothetical protein SORBIDRAFT_02g025125 [S...    74   9e-12
gb|EEC72938.1| hypothetical protein OsI_06800 [Oryza sativa Indi...    74   2e-11

>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 355

 Score = 67.8 bits (164), Expect(2) = 3e-12
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = -1

Query: 410 KSAYNLLQEG-NQHNMSSNSGFWTNMWNLKIPHKVKIFLWRAISDCLPTKEQLRIKHVNV 234
           KSAY +  +  + H+ + N+  W N+WNL IPH+V+ FLWR   +CLPT+  L  + +  
Sbjct: 93  KSAYRICSDLLHPHDSAHNNSSWMNIWNLNIPHRVRAFLWRLAHNCLPTRVNLNARGIQC 152

Query: 233 NHLCPVCNFELETIMHTLVSCQFAQLCW 150
              C +     E   H    C  A  CW
Sbjct: 153 EESCVMFENFAECHTHLFFVCAKAMDCW 180



 Score = 28.5 bits (62), Expect(2) = 3e-12
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -2

Query: 67  NDQFTKVGMLAWSLWKNRN 11
           + Q    GML WSLWK+RN
Sbjct: 212 SQQQQAAGMLLWSLWKSRN 230


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 72.4 bits (176), Expect(2) = 4e-12
 Identities = 31/71 (43%), Positives = 41/71 (57%)
 Frame = -1

Query: 347 WTNMWNLKIPHKVKIFLWRAISDCLPTKEQLRIKHVNVNHLCPVCNFELETIMHTLVSCQ 168
           W  +W +  P K+  F WRA  +CLPT+  L I+HV+    CP+C  ELET +H LV C 
Sbjct: 508 WAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECV 567

Query: 167 FAQLCWVRSEL 135
            A+  W  S L
Sbjct: 568 AARDVWDESGL 578



 Score = 23.5 bits (49), Expect(2) = 4e-12
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 58  FTKVGMLAWSLWKNRNEIV 2
           F K   + W LW  RN++V
Sbjct: 604 FAKYLAVCWGLWWRRNDVV 622


>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/87 (40%), Positives = 50/87 (57%)
 Frame = -1

Query: 410 KSAYNLLQEGNQHNMSSNSGFWTNMWNLKIPHKVKIFLWRAISDCLPTKEQLRIKHVNVN 231
           K+ Y LLQ       +S   FW   W LKIP KV+  +W+  S+C+ T   LR+++V+++
Sbjct: 410 KNCYRLLQGDLGRPETS---FWNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDLD 466

Query: 230 HLCPVCNFELETIMHTLVSCQFAQLCW 150
            LC  CN E ET+ H L  C  A+ CW
Sbjct: 467 PLCKWCNREPETLFHVLFGCSMARECW 493


>ref|XP_002462405.1| hypothetical protein SORBIDRAFT_02g025125 [Sorghum bicolor]
           gi|241925782|gb|EER98926.1| hypothetical protein
           SORBIDRAFT_02g025125 [Sorghum bicolor]
          Length = 457

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
 Frame = -1

Query: 410 KSAYNLLQEGNQHNM------SSNSGFWTNMWNLKIPHKVKIFLWRAISDCLPTKEQLRI 249
           KSAY L+ +G  +         S +  W+ +W LK+P KVK+F WR + + LPT+  L  
Sbjct: 150 KSAYRLIDKGRTNGGHQEAVGGSGNSCWSEIWKLKVPPKVKVFWWRVLHEFLPTRLALHR 209

Query: 248 KHVNVNHLCPVCNFELETIMHTLVSCQFAQLCWVRSE 138
           KH+     C  C  + E+I H L+ CQ A+  W +++
Sbjct: 210 KHIEPIANCDACGADSESIQHVLMECQIAKSFWEQTK 246


>gb|EEC72938.1| hypothetical protein OsI_06800 [Oryza sativa Indica Group]
          Length = 556

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
 Frame = -1

Query: 410 KSAYNL------LQEGNQHNMSSNSGFWTNMWNLKIPHKVKIFLWRAISDCLPTKEQLRI 249
           +SAY+L      + EG+  + + NS  W  +W    P KVKIF WRAI++ LPT E  + 
Sbjct: 421 RSAYHLAIALAQVDEGSSSSGNGNSRAWNALWKCNAPQKVKIFAWRAITNSLPTLENKKK 480

Query: 248 KHVNVNHLCPVCNFELETIMHTLVSCQFAQLCW 150
           + + V+ +C +C  E E ++H L  C  A+  W
Sbjct: 481 RKLEVSDICTICGVESEYVVHALFRCPHARQFW 513