BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039417
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    90   2e-16
gb|AAX95129.1| retrotransposon protein, putative, unclassified [...    86   4e-15
gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japo...    86   4e-15
gb|ABA91837.2| retrotransposon protein, putative, unclassified [...    86   4e-15
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    78   8e-13

>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/99 (43%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
 Frame = -3

Query: 303  TQREIFWKQRSKQFWLNSGDRNSKYFHAVASARKRNNKIQRLKADTGEWVDWDSGLAEVM 124
            TQ E++W QRS+  WL  GD+NS +FH     R++ NKI RLK D G W+D ++ +A   
Sbjct: 939  TQDEMYWHQRSRVNWLKLGDQNSSFFHQTTIQRRQYNKIVRLKDDHGNWLDSEADVALQF 998

Query: 123  TKYFKDLYLASS-TSWDQVLEGVDTSISEEQNQILLQPV 10
              YF  LY ++    W++VL+ VDT+++ E N+IL  PV
Sbjct: 999  LDYFTALYQSNGPQQWEEVLDFVDTAVTAEMNKILSSPV 1037


>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|62733115|gb|AAX95232.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group]
          Length = 1324

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 38/101 (37%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
 Frame = -3

Query: 300  QREIFWKQRSKQFWLNSGDRNSKYFHAVASARKRNNKIQRLKADTGEWVDWDSGLAEVMT 121
            QRE++W+QR+ Q WL  GDRN+K+FH  AS RK+ NKI++L+ D GE +  ++G   +++
Sbjct: 787  QRELYWRQRANQHWLEKGDRNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLIS 846

Query: 120  KYFKDLYLAS-STSWDQVLEGVDTSISEEQNQILLQPVKEE 1
            +++K L+ A    + D++L+ V   ++   N  L++ V  E
Sbjct: 847  EFYKQLFTAGVPLNLDELLQNVPKRVTSTMNDELMKGVTTE 887


>gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japonica Group]
          Length = 825

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 38/101 (37%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
 Frame = -3

Query: 300 QREIFWKQRSKQFWLNSGDRNSKYFHAVASARKRNNKIQRLKADTGEWVDWDSGLAEVMT 121
           QRE++W+QR+ Q WL  GDRN+K+FH  AS RK+ NKI++L+ D GE +  ++G   +++
Sbjct: 288 QRELYWRQRANQHWLEKGDRNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLIS 347

Query: 120 KYFKDLYLAS-STSWDQVLEGVDTSISEEQNQILLQPVKEE 1
           +++K L+ A    + D++L+ V   ++   N  L++ V  E
Sbjct: 348 EFYKQLFTAGVPLNLDELLQNVPKRVTSTMNDELMKGVTTE 388


>gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1301

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 38/101 (37%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
 Frame = -3

Query: 300  QREIFWKQRSKQFWLNSGDRNSKYFHAVASARKRNNKIQRLKADTGEWVDWDSGLAEVMT 121
            QRE++W+QR+ Q WL  GDRN+K+FH  AS RK+ NKI++L+ D GE +  ++G   +++
Sbjct: 764  QRELYWRQRANQHWLEKGDRNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLIS 823

Query: 120  KYFKDLYLAS-STSWDQVLEGVDTSISEEQNQILLQPVKEE 1
            +++K L+ A    + D++L+ V   ++   N  L++ V  E
Sbjct: 824  EFYKQLFTAGVPLNLDELLQNVPKRVTSTMNDELMKGVTTE 864


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 34/101 (33%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
 Frame = -3

Query: 300 QREIFWKQRSKQFWLNSGDRNSKYFHAVASARKRNNKIQRLKADTGEWVDWDSGLAEVMT 121
           + E++W QRS+Q W+ SGD+N+K+FH  AS R++ N ++R++ + GEW + +  + E   
Sbjct: 340 REEVYWHQRSRQDWIKSGDKNTKFFHQKASHREQRNNVRRIRNEAGEWFEDEDDVTECFA 399

Query: 120 KYFKDLYLA-SSTSWDQVLEGVDTSISEEQNQILLQPVKEE 1
            YF++L+ + ++   D +L  V   I++E    L  P + E
Sbjct: 400 HYFENLFQSGNNCEMDPILNIVKPQITDELGTQLDAPFRRE 440