BLASTX nr result

ID: Bupleurum21_contig00039410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039410
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    68   9e-10
gb|ABN06159.1| Polynucleotidyl transferase, Ribonuclease H fold ...    67   1e-09
ref|XP_003602374.1| hypothetical protein MTR_3g092650 [Medicago ...    64   1e-08
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    64   1e-08
ref|XP_003627699.1| hypothetical protein MTR_8g036680 [Medicago ...    63   2e-08

>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/100 (36%), Positives = 54/100 (54%)
 Frame = +1

Query: 16  EAESIGVLEAIGWSEDFADQPIIVETDSLLTVKELKEPGRFELELGHIIDQCRYLLGRRS 195
           EAE++G+ +AI W        + +E D  L V  + +    + E G IID CR LL + +
Sbjct: 109 EAEAVGLRDAILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFT 168

Query: 196 NLSVVFVRKQANKVAHKMARLPCLLNSYNIAMSPPSFLLE 315
           N  + FVR+QAN VAH  AR+      + +A + P  +LE
Sbjct: 169 NFKISFVRRQANVVAHSFARVSIFQPLFGLAFAKPESILE 208


>gb|ABN06159.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 266

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/99 (38%), Positives = 54/99 (54%)
 Frame = +1

Query: 4   VTVMEAESIGVLEAIGWSEDFADQPIIVETDSLLTVKELKEPGRFELELGHIIDQCRYLL 183
           +TV+E E++ +LEAI  ++      ++ E+DS   V+ L  PG  + E   I+    Y L
Sbjct: 156 MTVLEGEAVALLEAIHSADANRWNRVVFESDSSTLVQALSSPGHGDSEFSAIVSSIIYQL 215

Query: 184 GRRSNLSVVFVRKQANKVAHKMARLPCLLNSYNIAMSPP 300
              SN  V FVR+QAN VAH +AR  C   S+ I  S P
Sbjct: 216 SLHSNFEVKFVRRQANMVAHTLARADCSWASHRIFYSYP 254


>ref|XP_003602374.1| hypothetical protein MTR_3g092650 [Medicago truncatula]
           gi|355491422|gb|AES72625.1| hypothetical protein
           MTR_3g092650 [Medicago truncatula]
          Length = 187

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/100 (37%), Positives = 54/100 (54%)
 Frame = +1

Query: 4   VTVMEAESIGVLEAIGWSEDFADQPIIVETDSLLTVKELKEPGRFELELGHIIDQCRYLL 183
           +TV+E E+I +L+ I +++      ++ E+DS   V+ L  PG  + E   I+    Y L
Sbjct: 77  MTVLEGEAIALLDVIHFADVNRWDRVVFESDSATLVQALSSPGHGDSEFYAIVSNIIYQL 136

Query: 184 GRRSNLSVVFVRKQANKVAHKMARLPCLLNSYNIAMSPPS 303
              SN  V FVR+QAN VAH + R  C L S+ I    PS
Sbjct: 137 SLHSNFEVKFVRRQANMVAHTLDRAACSLASHRIFNFYPS 176


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/94 (38%), Positives = 49/94 (52%)
 Frame = +1

Query: 19  AESIGVLEAIGWSEDFADQPIIVETDSLLTVKELKEPGRFELELGHIIDQCRYLLGRRSN 198
           AE+IG+ EA+ W        +I E D+ + V  +        E G +I  CR LL    N
Sbjct: 221 AEAIGLREAVQWVLSLGRSNVIFEYDAKVVVDAVLSGAADLFEFGAVIADCRLLLQHGCN 280

Query: 199 LSVVFVRKQANKVAHKMARLPCLLNSYNIAMSPP 300
            SV F+RKQAN VAH +AR   L + +N+   PP
Sbjct: 281 YSVQFIRKQANLVAHSLARASHLQDGFNMFSVPP 314


>ref|XP_003627699.1| hypothetical protein MTR_8g036680 [Medicago truncatula]
           gi|355521721|gb|AET02175.1| hypothetical protein
           MTR_8g036680 [Medicago truncatula]
          Length = 116

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/84 (42%), Positives = 49/84 (58%)
 Frame = +1

Query: 4   VTVMEAESIGVLEAIGWSEDFADQPIIVETDSLLTVKELKEPGRFELELGHIIDQCRYLL 183
           VT  EAE+ G+LEA+  +     QP+I E+D  + V  +        ELG II  C+ LL
Sbjct: 16  VTPSEAEATGLLEAVKLAIARGMQPVIFESDCKIVVDAVNSSVNPHNELGDIIFYCKQLL 75

Query: 184 GRRSNLSVVFVRKQANKVAHKMAR 255
              +N SV FVR+QANKV H +A+
Sbjct: 76  SLHANFSVRFVRRQANKVTHNIAK 99


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