BLASTX nr result

ID: Bupleurum21_contig00039391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039391
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589037.1| hypothetical protein MTR_1g016740 [Medicago ...    97   1e-18
ref|XP_002309508.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002516466.1| hypothetical protein RCOM_0798260 [Ricinus c...    89   4e-16
ref|NP_196739.2| uncharacterized protein [Arabidopsis thaliana] ...    89   4e-16
ref|XP_002871499.1| hypothetical protein ARALYDRAFT_488015 [Arab...    87   2e-15

>ref|XP_003589037.1| hypothetical protein MTR_1g016740 [Medicago truncatula]
           gi|355478085|gb|AES59288.1| hypothetical protein
           MTR_1g016740 [Medicago truncatula]
          Length = 508

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 57/116 (49%), Positives = 73/116 (62%), Gaps = 6/116 (5%)
 Frame = -3

Query: 336 FVDLLRVWNVDKLGKG--CVIGDALRLFFPLLNDQVRDHIDARCGMRFLAGVVMVQFFLF 163
           FVDL+ VW VD  G G   V GD L+ FFP ++D VR  I+  C + +LAGVVM +  L 
Sbjct: 144 FVDLIPVWMVDCDGGGESGVGGDCLKGFFPFVSDGVRKGIEMGCEVGYLAGVVMFEALLL 203

Query: 162 RLCL----RVSRKEKHSDLKTLLSQAVAGFQNSYFLDLLLRMMLEPSLPVTNLLVS 7
           ++CL     ++R EK   L     Q + GF+N YFLD LLRMMLEP+LPV +LL S
Sbjct: 204 KMCLIFEAGIARGEKEKKLHAAAVQVMTGFRNFYFLDTLLRMMLEPALPVISLLGS 259


>ref|XP_002309508.1| predicted protein [Populus trichocarpa] gi|222855484|gb|EEE93031.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 49/111 (44%), Positives = 72/111 (64%), Gaps = 5/111 (4%)
 Frame = -3

Query: 330 DLLRVWNVDKLGKGCVIGDALRLFFPLLNDQVRDH-IDARCGMRFLAGVVMVQFFLFRLC 154
           +L+RVW V K+G  C  G+ LRLF P+++D VR+  +    G+ +LAGVV  + FL RLC
Sbjct: 158 ELVRVWMVGKIGGDCKFGEDLRLFCPVVSDGVREGMVSEGFGVGYLAGVVTCEAFLLRLC 217

Query: 153 LRV----SRKEKHSDLKTLLSQAVAGFQNSYFLDLLLRMMLEPSLPVTNLL 13
           L+     SR E   +L    +Q ++ F++ YF+D+LLRM+LEP LPV  +L
Sbjct: 218 LKFGCGFSRVELEKELLNGAAQMISAFRSYYFVDILLRMLLEPVLPVNAML 268


>ref|XP_002516466.1| hypothetical protein RCOM_0798260 [Ricinus communis]
           gi|223544286|gb|EEF45807.1| hypothetical protein
           RCOM_0798260 [Ricinus communis]
          Length = 579

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 51/117 (43%), Positives = 67/117 (57%), Gaps = 7/117 (5%)
 Frame = -3

Query: 336 FVDLLRVWNVDKLGKGCVIGDALRLFFPLLNDQVRDHIDAR---CGMRFLAGVVMVQFFL 166
           FVDL+RVW VDK+ + C   + LR+FFPL+ND +     +     G  +LAG+VM Q  L
Sbjct: 156 FVDLVRVWVVDKIDESCQFDEVLRVFFPLVNDGILRRFASEGNGIGTGYLAGIVMSQVLL 215

Query: 165 FRLCL----RVSRKEKHSDLKTLLSQAVAGFQNSYFLDLLLRMMLEPSLPVTNLLVS 7
             LCL    RVSR E   +L+    Q +  F    F D +LRM+LEP LP+  LL S
Sbjct: 216 LSLCLKFESRVSRVELEKELRERTVQTMTAFPTYDFFDTVLRMLLEPVLPIIPLLSS 272


>ref|NP_196739.2| uncharacterized protein [Arabidopsis thaliana]
           gi|62320268|dbj|BAD94549.1| putative protein
           [Arabidopsis thaliana] gi|332004337|gb|AED91720.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 504

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/114 (39%), Positives = 71/114 (62%), Gaps = 5/114 (4%)
 Frame = -3

Query: 339 NFVDLLRVWNVDKLGKGCVIGDALRLFFPLLNDQVRDHIDAR-CGMRFLAGVVMVQFFLF 163
           +F DL RVW VD++   C + D L +F P  ++ +R  ID+  CG+ +LAG+V  Q FL 
Sbjct: 159 SFADLSRVWVVDEVEDNCRVEDCLEVFMPFASEILRKEIDSESCGVGYLAGIVASQVFLL 218

Query: 162 RLCLR----VSRKEKHSDLKTLLSQAVAGFQNSYFLDLLLRMMLEPSLPVTNLL 13
            LC R    + R E   DL+  + Q ++GF + +F D++L+M+LEP L +T+L+
Sbjct: 219 SLCSRFDLDLGRSELDKDLQESVLQMISGFHSCFFFDVILKMLLEPYLHLTSLM 272


>ref|XP_002871499.1| hypothetical protein ARALYDRAFT_488015 [Arabidopsis lyrata subsp.
           lyrata] gi|297317336|gb|EFH47758.1| hypothetical protein
           ARALYDRAFT_488015 [Arabidopsis lyrata subsp. lyrata]
          Length = 507

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 46/115 (40%), Positives = 71/115 (61%), Gaps = 6/115 (5%)
 Frame = -3

Query: 339 NFVDLLRVWNVDKLGKGCVIGDALRLFFPLLNDQVRDHIDAR-CGMRFLAGVVMVQFFLF 163
           +F DL RVW VD++   C + D L +F P + + +R  +D+  C + +LAG+V  Q FL 
Sbjct: 163 SFADLSRVWIVDEVEDNCRVEDCLEIFMPFVTETLRKEMDSESCRVGYLAGIVASQVFLL 222

Query: 162 RLC----LRVSRKEKHSDLKTLLSQAVAGFQNSYFLDLLLRM-MLEPSLPVTNLL 13
            LC    L +SR E   DL+  + Q ++GF + YF D++L+M +LEP L +T+LL
Sbjct: 223 SLCSRFDLELSRSELEKDLRESVLQMISGFHSCYFFDVILKMLLLEPYLHLTSLL 277


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