BLASTX nr result

ID: Bupleurum21_contig00039367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039367
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95339.2| retrotransposon protein, putative, unclassified [...   167   1e-39
emb|CAD40214.2| OSJNBa0019J05.12 [Oryza sativa Japonica Group]        164   5e-39
dbj|BAG97774.1| unnamed protein product [Oryza sativa Japonica G...   163   1e-38
emb|CAE02919.3| OSJNBb0108J11.11 [Oryza sativa Japonica Group]        162   3e-38
emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera]   162   3e-38

>gb|ABA95339.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1348

 Score =  167 bits (422), Expect = 1e-39
 Identities = 79/123 (64%), Positives = 99/123 (80%), Gaps = 1/123 (0%)
 Frame = -3

Query: 366  IKSLRGFLGLTGYYRRFVKGYGVMSRPLTNLLKKG-AYVWNAEAELAFNQLKMAMSSTPV 190
            +K LRGFLGL GYYR+FVK +G++S+PLT LL+KG ++ W +EAE AF QLK A++S PV
Sbjct: 736  VKKLRGFLGLAGYYRKFVKNFGIISKPLTQLLRKGVSFRWGSEAEAAFQQLKQALTSAPV 795

Query: 189  LRMPDFSKQFIVETDACQTGLGAVLMQEGRPIAYLSKALAPKHMGLSTYEKELLAVVMAV 10
            L +PDFSKQF VET+A   G+GAVL QEG PIAYLSKAL P+  GLSTYEKE +A+++AV
Sbjct: 796  LGLPDFSKQFTVETNASDAGIGAVLSQEGHPIAYLSKALGPRSKGLSTYEKECMAILLAV 855

Query: 9    QKW 1
              W
Sbjct: 856  DHW 858


>emb|CAD40214.2| OSJNBa0019J05.12 [Oryza sativa Japonica Group]
          Length = 1817

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/123 (61%), Positives = 98/123 (79%), Gaps = 1/123 (0%)
 Frame = -3

Query: 366  IKSLRGFLGLTGYYRRFVKGYGVMSRPLTNLLKKGA-YVWNAEAELAFNQLKMAMSSTPV 190
            +K LRGFLGL GYYR+FVKG+GV+S+PLTNLL+KG  ++W  E + AF+ LK A+ S PV
Sbjct: 1024 VKKLRGFLGLAGYYRKFVKGFGVISKPLTNLLRKGVPFIWTPETDAAFHNLKQALVSAPV 1083

Query: 189  LRMPDFSKQFIVETDACQTGLGAVLMQEGRPIAYLSKALAPKHMGLSTYEKELLAVVMAV 10
            L +PDF K F VETDA  +G+GAVL Q+G P+AY+SKAL P+  GLSTYEKE +AV++AV
Sbjct: 1084 LALPDFQKVFTVETDASDSGIGAVLSQDGHPVAYISKALGPRTKGLSTYEKECMAVLLAV 1143

Query: 9    QKW 1
             +W
Sbjct: 1144 DQW 1146


>dbj|BAG97774.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 268

 Score =  163 bits (413), Expect = 1e-38
 Identities = 76/123 (61%), Positives = 98/123 (79%), Gaps = 1/123 (0%)
 Frame = -3

Query: 366 IKSLRGFLGLTGYYRRFVKGYGVMSRPLTNLLKKGA-YVWNAEAELAFNQLKMAMSSTPV 190
           +K LRGFLGL GYY++FV+ YG++S+PLTNLL+KG  Y+W AE E AF  LK A+ + PV
Sbjct: 128 VKELRGFLGLAGYYQKFVRHYGLLSKPLTNLLRKGQLYIWTAETEQAFQALKHALITAPV 187

Query: 189 LRMPDFSKQFIVETDACQTGLGAVLMQEGRPIAYLSKALAPKHMGLSTYEKELLAVVMAV 10
           L MPDF++ FIVETDA   G+GAVLMQ+  P+A+LS+AL P+H GLSTYEKE LA+++AV
Sbjct: 188 LSMPDFNEPFIVETDASDKGIGAVLMQKNHPVAFLSRALGPRHQGLSTYEKESLAIMLAV 247

Query: 9   QKW 1
             W
Sbjct: 248 DHW 250


>emb|CAE02919.3| OSJNBb0108J11.11 [Oryza sativa Japonica Group]
          Length = 815

 Score =  162 bits (410), Expect = 3e-38
 Identities = 77/123 (62%), Positives = 97/123 (78%), Gaps = 1/123 (0%)
 Frame = -3

Query: 366 IKSLRGFLGLTGYYRRFVKGYGVMSRPLTNLLKKGA-YVWNAEAELAFNQLKMAMSSTPV 190
           +K LR FLGLTGYYR+FV  YG++S+PLTNLL+KG  Y+W +E E AF  LK A+ + PV
Sbjct: 383 VKELRSFLGLTGYYRKFVCHYGILSKPLTNLLRKGQLYIWTSETEAAFQALKQALITAPV 442

Query: 189 LRMPDFSKQFIVETDACQTGLGAVLMQEGRPIAYLSKALAPKHMGLSTYEKELLAVVMAV 10
           L MP+FS+ FIVETDA   G+GAVLMQ   PIA+LSKAL P+H GLSTYEK+ LA+++AV
Sbjct: 443 LAMPNFSEPFIVETDASDKGIGAVLMQHQHPIAFLSKALGPRHQGLSTYEKKSLAIMLAV 502

Query: 9   QKW 1
           + W
Sbjct: 503 EHW 505


>emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera]
          Length = 1357

 Score =  162 bits (410), Expect = 3e-38
 Identities = 77/122 (63%), Positives = 98/122 (80%)
 Frame = -3

Query: 366  IKSLRGFLGLTGYYRRFVKGYGVMSRPLTNLLKKGAYVWNAEAELAFNQLKMAMSSTPVL 187
            +K LRGFLGLTGYYRRFVK YG +++PLT+LLKK A+ W   +  AF  LK AM + PVL
Sbjct: 739  LKQLRGFLGLTGYYRRFVKDYGKIAKPLTDLLKKDAFHWTEGSNQAFMALKQAMITAPVL 798

Query: 186  RMPDFSKQFIVETDACQTGLGAVLMQEGRPIAYLSKALAPKHMGLSTYEKELLAVVMAVQ 7
             +P+FSK+FI+ETDA   G+GAVLMQEG PIAY+SKAL+ +   LSTYEKE+LA++MA++
Sbjct: 799  ALPNFSKEFIIETDASGQGIGAVLMQEGHPIAYISKALSDRFQTLSTYEKEMLAILMAIK 858

Query: 6    KW 1
            KW
Sbjct: 859  KW 860


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