BLASTX nr result

ID: Bupleurum21_contig00039366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039366
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29
ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   131   5e-29
emb|CBI29512.3| unnamed protein product [Vitis vinifera]              131   5e-29
emb|CAN61142.1| hypothetical protein VITISV_004317 [Vitis vinifera]   131   5e-29
emb|CAN69520.1| hypothetical protein VITISV_018331 [Vitis vinifera]   127   9e-28

>ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|222870305|gb|EEF07436.1|
           predicted protein [Populus trichocarpa]
          Length = 701

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/123 (51%), Positives = 92/123 (74%)
 Frame = -3

Query: 369 VLQKDLVLKVEGKQELILYSKGKLVLSNEGLTKIIAAYRRCGRISDLSKLLSSVEKNVTS 190
           +LQKD +L V+ KQEL+++  GKL+LSN  L K++  YRR GR +DLSKLL  ++++   
Sbjct: 369 LLQKDSILTVKHKQELVMFRSGKLLLSNRALAKLVNGYRRHGRTTDLSKLLLCMQQDFHV 428

Query: 189 LQEENLCRSVVDASIHVGWLDTAHDILEDMDSMGRALGSSSYISLLKAYYERQMFREAEA 10
           L + + C  V+DA I +GWL+ AHDIL+DMD+ G  +GS+ +++LL AYY R+MF+EA+A
Sbjct: 429 LGQSSFCSDVIDACIRLGWLEMAHDILDDMDAAGAPIGSTLHMALLTAYYCREMFKEAKA 488

Query: 9   LLR 1
           LLR
Sbjct: 489 LLR 491


>ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g17616-like, partial [Vitis vinifera]
          Length = 457

 Score =  131 bits (330), Expect = 5e-29
 Identities = 64/123 (52%), Positives = 93/123 (75%)
 Frame = -3

Query: 369 VLQKDLVLKVEGKQELILYSKGKLVLSNEGLTKIIAAYRRCGRISDLSKLLSSVEKNVTS 190
           +LQKD V K++ KQEL+L+S GK VLSN+ L K++ AY+  GRI +LS+L+ S++K + +
Sbjct: 149 LLQKDSVFKMDSKQELVLFSNGKYVLSNKALVKLVIAYQGDGRIGELSRLMLSLQKELGT 208

Query: 189 LQEENLCRSVVDASIHVGWLDTAHDILEDMDSMGRALGSSSYISLLKAYYERQMFREAEA 10
           L+   L   V+DA I +GWL+TAH IL+DM+  G  +GSS+Y+SLL AYY+ +M REA+A
Sbjct: 209 LEGGGLISDVIDACIQLGWLETAHGILDDMELAGAPIGSSTYMSLLTAYYKGKMAREAKA 268

Query: 9   LLR 1
           LL+
Sbjct: 269 LLK 271


>emb|CBI29512.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  131 bits (330), Expect = 5e-29
 Identities = 64/123 (52%), Positives = 93/123 (75%)
 Frame = -3

Query: 369 VLQKDLVLKVEGKQELILYSKGKLVLSNEGLTKIIAAYRRCGRISDLSKLLSSVEKNVTS 190
           +LQKD V K++ KQEL+L+S GK VLSN+ L K++ AY+  GRI +LS+L+ S++K + +
Sbjct: 116 LLQKDSVFKMDSKQELVLFSNGKYVLSNKALVKLVIAYQGDGRIGELSRLMLSLQKELGT 175

Query: 189 LQEENLCRSVVDASIHVGWLDTAHDILEDMDSMGRALGSSSYISLLKAYYERQMFREAEA 10
           L+   L   V+DA I +GWL+TAH IL+DM+  G  +GSS+Y+SLL AYY+ +M REA+A
Sbjct: 176 LEGGGLISDVIDACIQLGWLETAHGILDDMELAGAPIGSSTYMSLLTAYYKGKMAREAKA 235

Query: 9   LLR 1
           LL+
Sbjct: 236 LLK 238


>emb|CAN61142.1| hypothetical protein VITISV_004317 [Vitis vinifera]
          Length = 854

 Score =  131 bits (330), Expect = 5e-29
 Identities = 64/123 (52%), Positives = 93/123 (75%)
 Frame = -3

Query: 369 VLQKDLVLKVEGKQELILYSKGKLVLSNEGLTKIIAAYRRCGRISDLSKLLSSVEKNVTS 190
           +LQKD V K++ KQEL+L+S GK VLSN+ L K++ AY+  GRI +LS+L+ S++K + +
Sbjct: 544 LLQKDSVFKMDSKQELVLFSNGKYVLSNKALVKLVIAYQGDGRIGELSRLMLSLQKELGT 603

Query: 189 LQEENLCRSVVDASIHVGWLDTAHDILEDMDSMGRALGSSSYISLLKAYYERQMFREAEA 10
           L+   L   V+DA I +GWL+TAH IL+DM+  G  +GSS+Y+SLL AYY+ +M REA+A
Sbjct: 604 LEGGGLISDVIDACIQLGWLETAHGILDDMELAGAPIGSSTYMSLLTAYYKGKMAREAKA 663

Query: 9   LLR 1
           LL+
Sbjct: 664 LLK 666


>emb|CAN69520.1| hypothetical protein VITISV_018331 [Vitis vinifera]
          Length = 444

 Score =  127 bits (319), Expect = 9e-28
 Identities = 65/123 (52%), Positives = 91/123 (73%)
 Frame = -3

Query: 369 VLQKDLVLKVEGKQELILYSKGKLVLSNEGLTKIIAAYRRCGRISDLSKLLSSVEKNVTS 190
           +LQKD V K++ KQEL+L+  GK VLSN+ L K+I AY+R GRI +LS+L+ S++K + +
Sbjct: 107 LLQKDSVFKMDSKQELLLFRNGKYVLSNKALAKLIIAYKRDGRIGELSRLMLSLQKELGT 166

Query: 189 LQEENLCRSVVDASIHVGWLDTAHDILEDMDSMGRALGSSSYISLLKAYYERQMFREAEA 10
           L E  L   V+DA I +GWL+TAHDIL+DM+  G    S +Y+SLL AYY+ +M REA+A
Sbjct: 167 L-EGGLISDVIDACIQLGWLETAHDILDDMELAGAPASSITYMSLLTAYYKGKMVREAKA 225

Query: 9   LLR 1
           LL+
Sbjct: 226 LLK 228


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